F333953

General Info

Members Datasets Scaffolds Average Seq Length
221 176 442 420

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2918501144|2918504138
Length 447
Sequence ALPRALGFGRAGGTAVTARVTAPAAALLLAGLTATACAPQTSDGKATTDEKTGTLRVWLFQEVSNKPKEQVVAQAVAGFEKQHQGAKVEVEYIPVETRAQRVKAAFNDPKSAPDLIEYGNTDTAGYVKDGGLADISTEFGAWNEAKDTDPTAKQSVTVGGKVYGAPLFVGVRALYYRTDVFGELGLTAPKSQAELVSTAKKIRKARPELYGIAVGGAYTYGAMPFVWAAGGELATANGDAYKAAVNSEAALKGISTYTSLFGDDNCPAAKCAQMGGNATVTAFASGKAAMAIGGDFSHAAVEAGTVKGKYAVVPLPGTTPGSIAPAFAGGNNIGVLKSTSHRSLAVDLLKSLTGKETQGRLFDAMGFLPTFTDVRTAAAQRQPFVKPFIDTLGAGTKFVPASAGWGQIDASLVLPTMFQEVVSGRKDVKAAADDAAKKMDAAFAPAG

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
3 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
4 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
5 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
6 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
7 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
8 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
9 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
10 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
11 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
12 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
13 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
14 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
15 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
16 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
17 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
18 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
19 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
20 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
21 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
22 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
23 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
24 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
25 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
26 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
27 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
28 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
29 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
30 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
31 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
32 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
33 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
34 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
35 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
36 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
37 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
38 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
39 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
40 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
41 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
42 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
43 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
44 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
45 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
46 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
47 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
48 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
49 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
50 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
51 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
52 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
53 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
54 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
55 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
56 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
57 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
58 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
59 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
60 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
61 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
62 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
63 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
64 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
65 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
66 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
67 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
68 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
69 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
70 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
71 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
72 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
73 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
74 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
75 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
76 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
77 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
78 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
79 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
80 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
81 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
82 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
83 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
84 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
85 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
86 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
87 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
88 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
89 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
90 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
91 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
92 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
93 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
96 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
102 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
103 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
104 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
105 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
106 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
107 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
108 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
109 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
110 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
111 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
112 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
113 2643221548 Streptomyces sp. Root55 Isolate Unclassified
114 2643221578 Streptomyces sp. Root63 Isolate Unclassified
115 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
116 2643221647 Streptomyces sp. Root369 Isolate Unclassified
117 2643221670 Streptomyces sp. Root431 Isolate Unclassified
118 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
119 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
120 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
121 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
122 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
123 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
124 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
125 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
126 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
127 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
128 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
129 2808606448 Streptomyces sp. 193411 Isolate Unclassified
130 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
131 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
132 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
133 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
134 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
135 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
136 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
137 2862574272 Streptomyces sp. AcE210 Isolate Nodule
138 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
139 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
140 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
141 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
142 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
143 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
144 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
145 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
146 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
147 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
148 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
149 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
150 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
151 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
152 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
153 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
154 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
155 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
156 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
157 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
158 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
159 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
160 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
161 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
162 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
163 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
164 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
165 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
166 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
167 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
168 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
169 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
170 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
171 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
172 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
173 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
174 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
175 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
176 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 68.33
Metatranscriptomes 1.36
Isolates 30.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.52
Nodule 0.9
Rhizoplane 1.81
Rhizosphere 66.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1065437 3300003578 Bacteria 7455
2 Ga0006562J51391_1065439 3300003578 Bacteria 3740
3 Ga0006562J51391_1107674 3300003578 Bacteria 2084
4 Ga0070710_10062650 3300005437 Bacteria 2122
5 Ga0075367_10001811 3300006178 Bacteria 9410
6 Ga0157374_10031535 3300013296 Bacteria 4818
7 Ga0207426_1018039 3300025302 Bacteria 2495
8 Ga0209371_1009141 3300027312 Bacteria 3185
9 Ga0307517_10006087 3300028786 Bacteria 17978
10 Ga0307517_10011194 3300028786 Bacteria 12450
11 Ga0307515_10118155 3300028794 Bacteria 3028
12 Ga0307515_10213472 3300028794 Bacteria 1767
13 Ga0268256_1006363 3300030500 Bacteria 4411
14 Ga0307511_10000133 3300030521 Bacteria 68052
15 Ga0307511_10043730 3300030521 Bacteria 3735
16 Ga0307512_10025890 3300030522 Bacteria 5188
17 Ga0307512_10053295 3300030522 Bacteria 3218
18 Ga0307513_10017644 3300031456 Bacteria 8553
19 Ga0307509_10088374 3300031507 Bacteria 3181
20 Ga0307509_10110104 3300031507 Bacteria 2761
21 Ga0307509_10111755 3300031507 Bacteria 2734
22 Ga0307508_10008518 3300031616 Bacteria 9476
23 Ga0307508_10031169 3300031616 Bacteria 4819
24 Ga0307508_10049471 3300031616 Bacteria 3743
25 Ga0307508_10123450 3300031616 Bacteria 2192
26 Ga0307514_10017872 3300031649 Bacteria 5827
27 Ga0307514_10074036 3300031649 Bacteria 2544
28 Ga0307514_10114040 3300031649 Bacteria 1906
29 Ga0307516_10005220 3300031730 Bacteria 15643
30 Ga0307516_10009092 3300031730 Bacteria 11126
31 Ga0307516_10013416 3300031730 Bacteria 8736
32 Ga0307516_10014175 3300031730 Bacteria 8447
33 Ga0307518_10001053 3300031838 Bacteria 20666
34 Ga0307410_10046993 3300031852 Bacteria 2882
35 Ga0307416_100086434 3300032002 Bacteria 2673
36 Ga0307416_100339486 3300032002 Bacteria 1514
37 Ga0307507_10014021 3300033179 Bacteria 9626
38 Ga0307510_10175649 3300033180 Bacteria 1713
39 Ga0395900_0121072 3300037418 Bacteria 2685
40 Ga0395898_0043966 3300037466 Bacteria 4400
41 Ga0439436_0000502 3300041404 Bacteria 10200
42 Ga0439436_0001303 3300041404 Bacteria 7141
43 Ga0439439_0001760 3300041406 Bacteria 4427
44 Ga0439439_0003214 3300041406 Bacteria 3581
45 Ga0451853_0370809 3300041512 Bacteria 3642
46 Ga0451853_2129295 3300041512 Bacteria 6836
47 Ga0439448_0001394 3300042005 Bacteria 6234
48 Ga0439455_0000910 3300042012 Bacteria 4587
49 Ga0439457_000614 3300042014 Bacteria 10515
50 Ga0450894_000266 3300042131 Bacteria 9384
51 Ga0450898_002730 3300042134 Bacteria 2475
52 Ga0450899_000210 3300042135 Bacteria 6073
53 Ga0450903_000007 3300042138 Bacteria 38287
54 Ga0450906_000632 3300042145 Bacteria 7538
55 Ga0466972_0032852 3300044658 Bacteria 2547
56 Ga0495617_007873 3300046452 Bacteria 3686
57 Ga0495627_014545 3300046453 Bacteria 2743
58 Ga0495592_0010744 3300046454 Bacteria 6901
59 Ga0495603_0003808 3300046455 Bacteria 8983
60 Ga0495603_0008606 3300046455 Bacteria 6167
61 Ga0495590_0012594 3300046457 Bacteria 3136
62 Ga0495629_0005059 3300046459 Bacteria 9866
63 Ga0495629_0010636 3300046459 Bacteria 6693
64 Ga0495629_0135916 3300046459 Bacteria 1711
65 Ga0495638_0078427 3300046460 Bacteria 2010
66 Ga0495651_0001316 3300046462 Bacteria 19237
67 Ga0495651_0045626 3300046462 Bacteria 3395
68 Ga0495662_0002631 3300046476 Bacteria 9082
69 Ga0495664_0005076 3300046477 Bacteria 7216
70 Ga0495664_0064268 3300046477 Bacteria 2187
71 Ga0495594_0000183 3300046499 Bacteria 30417
72 Ga0495594_0024450 3300046499 Bacteria 3245
73 Ga0495583_0014217 3300046506 Bacteria 4401
74 Ga0495583_0070364 3300046506 Bacteria 1539
75 Ga0495606_0012933 3300046507 Bacteria 6642
76 Ga0495608_0054447 3300046511 Bacteria 2645
77 Ga0495616_0004029 3300046513 Bacteria 9331
78 Ga0495620_0014719 3300046515 Bacteria 3967
79 Ga0495620_0015598 3300046515 Bacteria 3831
80 Ga0495628_0032119 3300046516 Bacteria 4241
81 Ga0495630_0008260 3300046517 Bacteria 7477
82 Ga0495631_0015846 3300046518 Bacteria 3602
83 Ga0495648_0087450 3300046524 Bacteria 1755
84 Ga0495652_0015825 3300046529 Bacteria 6753
85 Ga0495654_0015386 3300046530 Bacteria 4062
86 Ga0495640_0034287 3300046533 Bacteria 3600
87 Ga0495640_0045935 3300046533 Bacteria 3029
88 Ga0495586_0101096 3300046535 Bacteria 1600
89 Ga0495609_0069639 3300046538 Bacteria 1546
90 Ga0495622_0006314 3300046557 Bacteria 5502
91 Ga0495633_0035357 3300046558 Bacteria 2399
92 Ga0495668_0026523 3300046616 Bacteria 3287
93 Ga0495634_0000288 3300046642 Bacteria 48179
94 Ga0495634_0082440 3300046642 Bacteria 2101
95 Ga0495611_0019550 3300046648 Bacteria 2909
96 Ga0495625_0032832 3300046660 Bacteria 3844
97 Ga0495625_0095308 3300046660 Bacteria 2052
98 Ga0495635_0000979 3300046663 Bacteria 18813
99 Ga0495635_0046667 3300046663 Bacteria 2988
100 Ga0495657_0006959 3300046675 Bacteria 8780
101 Ga0495599_0024034 3300046678 Bacteria 3811
102 Ga0495623_0065269 3300046679 Bacteria 2277
103 Ga0495646_0000748 3300046680 Bacteria 18098
104 Ga0495658_0009327 3300046683 Bacteria 4888
105 Ga0495613_0017944 3300046689 Bacteria 5273
106 Ga0495613_0018296 3300046689 Bacteria 5224
107 Ga0495670_0002273 3300046691 Bacteria 9475
108 Ga0495671_0001735 3300046692 Bacteria 14147
109 Ga0495649_0014316 3300046694 Bacteria 4550
110 Ga0495649_0039562 3300046694 Bacteria 2585
111 Ga0495589_0019921 3300046794 Bacteria 3431
112 Ga0495589_0038654 3300046794 Bacteria 2387
113 Ga0495660_0030568 3300046810 Bacteria 3033
114 Ga0495660_0071708 3300046810 Bacteria 1836
115 Ga0495581_0018037 3300047315 Bacteria 4099
116 Ga0495604_0006382 3300047317 Bacteria 9351
117 Ga0495674_0077616 3300047319 Bacteria 2855
118 Ga0495676_0014541 3300047321 Bacteria 7041
119 Ga0495676_0018685 3300047321 Bacteria 6113
120 Ga0495676_0033014 3300047321 Bacteria 4363
121 Ga0495676_0066834 3300047321 Bacteria 2783
122 Ga0495680_0038685 3300047322 Bacteria 3810
123 Ga0495683_0054307 3300047323 Bacteria 1997
124 Ga0495687_002142 3300047443 Bacteria 16478
125 Ga0495687_024835 3300047443 Bacteria 2842
126 Ga0495675_0006996 3300047444 Bacteria 6938
127 Ga0495685_001570 3300047447 Bacteria 7031
128 Ga0495685_001946 3300047447 Bacteria 6398
129 Ga0495685_003274 3300047447 Bacteria 5157
130 Ga0495681_0000117 3300047470 Bacteria 69601
131 Ga0495681_0007193 3300047470 Bacteria 7156
132 Ga0495681_0014358 3300047470 Bacteria 4545
133 Ga0495686_0052743 3300047472 Bacteria 2549
134 Ga0495593_0001701 3300047673 Bacteria 13040
135 Ga0495602_0020886 3300048088 Bacteria 6461
136 Ga0495614_0005537 3300048089 Bacteria 5695
137 Ga0495614_0061239 3300048089 Bacteria 1617
138 Ga0495626_0041667 3300048091 Bacteria 2160
139 Ga0496102_0036728 3300048905 Bacteria 4415
140 Ga0496103_0052219 3300048906 Bacteria 2532
141 Ga0496112_0002260 3300048915 Bacteria 15393
142 Ga0501034_0046963 3300049571 Bacteria 4362
143 Ga0501038_0011829 3300049574 Bacteria 7965
144 Ga0501070_0126594 3300049586 Bacteria 2111
145 Ga0501035_0037587 3300049822 Bacteria 4383
146 nmdc:mga06z11_886_c1 3300050494 Bacteria 10922
147 Ga0495655_0004188 3300053083 Bacteria 2447
148 Ga0500578_0012539 3300053086 Bacteria 5468
149 Ga0500640_024055 3300053095 Bacteria 2643
150 Ga0500641_0016476 3300053096 Bacteria 2753
151 Ga0500553_032806 3300053101 Bacteria 2586
152 Ga0500652_005094 3300053131 Bacteria 4111
153 Ga0500561_0000888 3300053137 Bacteria 4776
154 Ga0500573_0050033 3300053140 Bacteria 2404
155 2918504138 2918501144 Bacteria 8668083
156 2547407164 2547132111 Bacteria 8013147
157 2585310021 2582581313 Bacteria 10042643
158 2643765471 2643221548 Bacteria 8053412
159 2643898253 2643221578 Bacteria 9213798
160 2643944373 2643221587 Bacteria 7586415
161 2644264500 2643221647 Bacteria 10741251
162 2644385707 2643221670 Bacteria 6497041
163 2644409398 2643221673 Bacteria 9196637
164 2644431271 2643221677 Bacteria 7584031
165 2644436742 2643221678 Bacteria 9540101
166 2644462458 2643221682 Bacteria 6743283
167 2784588217 2784132148 Bacteria 8627943
168 2785343842 2784746763 Bacteria 9783172
169 2785369020 2784746768 Bacteria 10036182
170 2786670169 2786546132 Bacteria 10419719
171 2791911563 2791354901 Bacteria 8322202
172 2793981249 2791355406 Bacteria 11364898
173 2808841640 2808606359 Bacteria 9866990
174 2809231829 2808606448 Bacteria 8656184
175 2811848592 2808606982 Bacteria 7791042
176 2812480936 2811994917 Bacteria 7761064
177 2819693330 2818991463 Bacteria 7948711
178 2852642338 2852635781 Bacteria 8251373
179 2857744144 2857740372 Bacteria 4782044
180 2862184583 2862178590 Bacteria 8583590
181 2862514961 2862507626 Bacteria 9425308
182 2862579639 2862574272 Bacteria 10567477
183 2873320907 2873314349 Bacteria 8512634
184 2875394138 2875391855 Bacteria 7600475
185 2899368009 2899359706 Bacteria 10940472
186 2904498839 2904497146 Bacteria 4731781
187 2912720486 2912715099 Bacteria 9460473
188 2917738473 2917736166 Bacteria 9690793
189 2919036842 2919034639 Bacteria 4763403
190 2919473368 2919468124 Bacteria 9133025
191 2919541607 2919538618 Bacteria 4677069
192 2933420430 2933418574 Bacteria 4476724
193 2946050469 2946045630 Bacteria 8527308
194 2946067265 2946064051 Bacteria 8957905
195 2954003187 2954002825 Bacteria 9173742
196 2954386665 2954380949 Bacteria 10050426
197 2954676506 2954673503 Bacteria 9685905
198 2954687661 2954682443 Bacteria 9862841
199 2954697477 2954691527 Bacteria 10720516
200 2954704757 2954701450 Bacteria 10834262
201 2954716639 2954711539 Bacteria 10867210
202 2954726587 2954721474 Bacteria 10456478
203 2954735209 2954731030 Bacteria 10243860
204 2954745509 2954740390 Bacteria 10229294
205 2954754079 2954749733 Bacteria 10366972
206 2954764483 2954759201 Bacteria 9358192
207 2966602943 2966598605 Bacteria 7676064
208 2990062816 2990059506 Bacteria 9321252
209 2990088686 2990088156 Bacteria 6657676
210 2997601645 2997600082 Bacteria 9896405
211 3006496507 3006493962 Bacteria 8825450
212 8008559934 8008558824 Bacteria 10610750
213 8008575365 8008574985 Bacteria 7815457
214 8023631847 8023623736 Bacteria 8593882
215 8025483380 8025478263 Bacteria 8209203
216 8047898494 8047893842 Bacteria 11723082
217 8048134918 8048127548 Bacteria 11053136
218 8048360416 8048356638 Bacteria 11044339
219 8048375456 8048369669 Bacteria 11666822
220 8048382749 8048379754 Bacteria 11877923
221 8048411132 8048406513 Bacteria 8936924
222 Ga0006562J51391_1065437
223 Ga0006562J51391_1065439
224 Ga0006562J51391_1107674
225 Ga0070710_10062650
226 Ga0075367_10001811
227 Ga0157374_10031535
228 Ga0207426_1018039
229 Ga0209371_1009141
230 Ga0307517_10006087
231 Ga0307517_10011194
232 Ga0307515_10118155
233 Ga0307515_10213472
234 Ga0268256_1006363
235 Ga0307511_10000133
236 Ga0307511_10043730
237 Ga0307512_10025890
238 Ga0307512_10053295
239 Ga0307513_10017644
240 Ga0307509_10088374
241 Ga0307509_10110104
242 Ga0307509_10111755
243 Ga0307508_10008518
244 Ga0307508_10031169
245 Ga0307508_10049471
246 Ga0307508_10123450
247 Ga0307514_10017872
248 Ga0307514_10074036
249 Ga0307514_10114040
250 Ga0307516_10005220
251 Ga0307516_10009092
252 Ga0307516_10013416
253 Ga0307516_10014175
254 Ga0307518_10001053
255 Ga0307410_10046993
256 Ga0307416_100086434
257 Ga0307416_100339486
258 Ga0307507_10014021
259 Ga0307510_10175649
260 Ga0395900_0121072
261 Ga0395898_0043966
262 Ga0439436_0000502
263 Ga0439436_0001303
264 Ga0439439_0001760
265 Ga0439439_0003214
266 Ga0451853_0370809
267 Ga0451853_2129295
268 Ga0439448_0001394
269 Ga0439455_0000910
270 Ga0439457_000614
271 Ga0450894_000266
272 Ga0450898_002730
273 Ga0450899_000210
274 Ga0450903_000007
275 Ga0450906_000632
276 Ga0466972_0032852
277 Ga0495617_007873
278 Ga0495627_014545
279 Ga0495592_0010744
280 Ga0495603_0003808
281 Ga0495603_0008606
282 Ga0495590_0012594
283 Ga0495629_0005059
284 Ga0495629_0010636
285 Ga0495629_0135916
286 Ga0495638_0078427
287 Ga0495651_0001316
288 Ga0495651_0045626
289 Ga0495662_0002631
290 Ga0495664_0005076
291 Ga0495664_0064268
292 Ga0495594_0000183
293 Ga0495594_0024450
294 Ga0495583_0014217
295 Ga0495583_0070364
296 Ga0495606_0012933
297 Ga0495608_0054447
298 Ga0495616_0004029
299 Ga0495620_0014719
300 Ga0495620_0015598
301 Ga0495628_0032119
302 Ga0495630_0008260
303 Ga0495631_0015846
304 Ga0495648_0087450
305 Ga0495652_0015825
306 Ga0495654_0015386
307 Ga0495640_0034287
308 Ga0495640_0045935
309 Ga0495586_0101096
310 Ga0495609_0069639
311 Ga0495622_0006314
312 Ga0495633_0035357
313 Ga0495668_0026523
314 Ga0495634_0000288
315 Ga0495634_0082440
316 Ga0495611_0019550
317 Ga0495625_0032832
318 Ga0495625_0095308
319 Ga0495635_0000979
320 Ga0495635_0046667
321 Ga0495657_0006959
322 Ga0495599_0024034
323 Ga0495623_0065269
324 Ga0495646_0000748
325 Ga0495658_0009327
326 Ga0495613_0017944
327 Ga0495613_0018296
328 Ga0495670_0002273
329 Ga0495671_0001735
330 Ga0495649_0014316
331 Ga0495649_0039562
332 Ga0495589_0019921
333 Ga0495589_0038654
334 Ga0495660_0030568
335 Ga0495660_0071708
336 Ga0495581_0018037
337 Ga0495604_0006382
338 Ga0495674_0077616
339 Ga0495676_0014541
340 Ga0495676_0018685
341 Ga0495676_0033014
342 Ga0495676_0066834
343 Ga0495680_0038685
344 Ga0495683_0054307
345 Ga0495687_002142
346 Ga0495687_024835
347 Ga0495675_0006996
348 Ga0495685_001570
349 Ga0495685_001946
350 Ga0495685_003274
351 Ga0495681_0000117
352 Ga0495681_0007193
353 Ga0495681_0014358
354 Ga0495686_0052743
355 Ga0495593_0001701
356 Ga0495602_0020886
357 Ga0495614_0005537
358 Ga0495614_0061239
359 Ga0495626_0041667
360 Ga0496102_0036728
361 Ga0496103_0052219
362 Ga0496112_0002260
363 Ga0501034_0046963
364 Ga0501038_0011829
365 Ga0501070_0126594
366 Ga0501035_0037587
367 nmdc:mga06z11_886_c1
368 Ga0495655_0004188
369 Ga0500578_0012539
370 Ga0500640_024055
371 Ga0500641_0016476
372 Ga0500553_032806
373 Ga0500652_005094
374 Ga0500561_0000888
375 Ga0500573_0050033
376 2918504138
377 2547407164
378 2585310021
379 2643765471
380 2643898253
381 2643944373
382 2644264500
383 2644385707
384 2644409398
385 2644431271
386 2644436742
387 2644462458
388 2784588217
389 2785343842
390 2785369020
391 2786670169
392 2791911563
393 2793981249
394 2808841640
395 2809231829
396 2811848592
397 2812480936
398 2819693330
399 2852642338
400 2857744144
401 2862184583
402 2862514961
403 2862579639
404 2873320907
405 2875394138
406 2899368009
407 2904498839
408 2912720486
409 2917738473
410 2919036842
411 2919473368
412 2919541607
413 2933420430
414 2946050469
415 2946067265
416 2954003187
417 2954386665
418 2954676506
419 2954687661
420 2954697477
421 2954704757
422 2954716639
423 2954726587
424 2954735209
425 2954745509
426 2954754079
427 2954764483
428 2966602943
429 2990062816
430 2990088686
431 2997601645
432 3006496507
433 8008559934
434 8008575365
435 8023631847
436 8025483380
437 8047898494
438 8048134918
439 8048360416
440 8048375456
441 8048382749
442 8048411132

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

62

359

0.91

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

74

386

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
1n3x-assembly1.cif.gz_A ligand-free high-affinity maltose-binding protein 0.9023 11 398
6vls-assembly4.cif.gz_D structure of c-terminal fragment of vip3a toxin 0.8995 12 399
6vls-assembly1.cif.gz_A structure of c-terminal fragment of vip3a toxin 0.8975 12 399
1peb-assembly1.cif.gz_A ligand-free high-affinity maltose-binding protein 0.8945 11 398
8dx4-assembly1.cif.gz_A clostridioides difficile r20291 minor pilin - pilw fused with maltose binding protein 0.8926 11 399
ID Description Score Start End Superfamily
2gh9A01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8935 13 355 3.40.190.10
2dfzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8892 12 355 3.40.190.10
5ysdB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8854 12 355 3.40.190.10
3n95B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8854 11 127 3.40.190.10
5ci5B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8823 10 126 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A810MS75-F1-model_v4 deleted 0.9551 16 402
AF-A0A810MS75-F1-model_v4 deleted 0.9478 16 402
AF-D9UFP9-F1-model_v4 Maltose/trehalose porter 0.9325 1 401 GO:0015768
GO:0042956
GO:0055052
GO:1901982
AF-A0A1Z1W8U9-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.9299 3 405 GO:0015768
GO:0042956
GO:0055052
GO:1901982
AF-A0A1Z1W8U9-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.9233 3 405 GO:0015768
GO:0042956
GO:0055052
GO:1901982

Map