F333936

General Info

Members Datasets Scaffolds Average Seq Length
221 186 442 761

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2855386786|2855390216
Length 863
Sequence PEQTEPETGPIEIPEPPLEPLDGTPTEEPADVPGVGADEATSGSADADASPAEGAADRRTPVSTYRLQITPEFDLLAAARLLPYLHDLGVDWVYLSPLLASEPDSEHGYDVTSFNRIDPARGGAVGLAALSAEAQRLGMGVLVDIVPNHVGVATPAENAWWWDLLKHGAGSKYAAAFDVDWEAGAGRIRIPVIGDDDQPEPGGAIGNLEVVGNLLRYHDQLFPVAPGTAEPDDDGNPPDPQEVHAHQHYELVNWRRADTDLNYRRFFAVNTLAGVRVEDPRVFDAVHVEVRRWFDEGLVDGLRVDHPDGLRDPKGYLDDLADLTGGAYVLVEKILEPGEELPTSWATAGTTGYDALAHLDRVLTDPAGQEPLDALEARLRGADGPVDFHAMVHDLKHEVATGILRSETRRIVRGLRRELADATPDDEALEAAVAELLACFPVYRSYLPDAGHEHLEQAFTAARTRRPELAATLDAVRPILADGDTLPAKRFQQTSGMVMAKGVEDCAFYRYSRLTSLNEVGGDPSLFSITPAQFHEAMTLRQREWPHAMTTLSTHDTKRGEDVRARITVLAEMPQHWEHALRRLLALAPVPDPVFGSLLWQAILGAWPASRDRLRAYAEKAMREAGDHTTWTQVDTDYEHAVQRAVDAVFDDHDVRSVLEDLVEHTAHPGWSNALTAKLVALTMPGVPDVYQGSELWEQSLVDPDNRREVDFDLRDDLLGAVRAGARAALGHGPEDSGIVKLLVTHKALLARRERPELFTGYTPLSAEGEAAEHCLAFDRGGAITVATRLPHGLRTRHGWGDTTLTLPSGSWSDALTGRSVSAGSTTAAGSTTGDGVVRLADLLHDYPVALLLREDTEGAPAR

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
34 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
52 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
53 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
62 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
63 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
64 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
65 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
66 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
67 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
68 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
69 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
70 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
73 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
74 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
83 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
84 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
85 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
86 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
87 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
88 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
97 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
98 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
104 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
105 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
106 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
107 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
110 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
111 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
112 2643221553 Microbacterium sp. Root553 Isolate Unclassified
113 2643221572 Leifsonia sp. Root60 Isolate Unclassified
114 2643221615 Nocardioides sp. Root224 Isolate Unclassified
115 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
116 2643221641 Nocardioides sp. Root122 Isolate Unclassified
117 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
118 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
119 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
120 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
121 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
122 2739367653 Kocuria sp. OV113 Isolate Unclassified
123 2739367898 Nocardioides sp. CF479 Isolate Unclassified
124 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
125 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
126 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
127 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
128 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
129 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
130 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
131 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
132 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
133 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
134 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
135 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
136 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
137 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
138 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
139 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
140 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
141 2857727296 Kocuria sp. R-72562 Isolate Unclassified
142 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
143 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
144 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
145 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
146 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
147 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
148 2902582711 Micromonospora sp. AP08 Isolate Unclassified
149 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
150 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
151 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
152 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
153 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
154 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
155 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
156 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
157 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
158 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
159 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
160 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
161 2920879853 Kocuria salina CV6 Isolate Unclassified
162 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
163 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
164 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
165 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
166 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
167 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
168 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
169 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
170 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
171 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
172 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
173 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
174 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
175 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
176 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
177 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
178 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
179 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
180 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
181 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
182 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
183 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
184 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
185 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
186 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 64.71
Metatranscriptomes 0.45
Isolates 34.84

Biome Distribution

Category Percentage (%)
Aerial Root 1.36
Bulb 0
Endosphere 9.5
Nodule 0.45
Rhizoplane 7.24
Rhizosphere 57.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1001138 3300002773 Bacteria 12371
2 Ga0070683_100010914 3300005329 Bacteria 7822
3 Ga0070692_10015560 3300005345 Bacteria 3600
4 Ga0070659_100034211 3300005366 Bacteria 3951
5 Ga0070667_100009865 3300005367 Bacteria 7917
6 Ga0068867_100002627 3300005459 Bacteria 12676
7 Ga0070685_10022045 3300005466 Bacteria 3468
8 Ga0070684_100001907 3300005535 Bacteria 15287
9 Ga0070672_100003203 3300005543 Bacteria 10594
10 Ga0070665_100001227 3300005548 Bacteria 31181
11 Ga0068857_100027149 3300005577 Bacteria 5050
12 Ga0068854_100036812 3300005578 Bacteria 3432
13 Ga0068852_100016916 3300005616 Bacteria 5705
14 Ga0068860_100006201 3300005843 Bacteria 12022
15 Ga0075365_10015417 3300006038 Bacteria 4624
16 Ga0075365_10017446 3300006038 Bacteria 4392
17 Ga0075365_10019490 3300006038 Bacteria 4188
18 Ga0075365_10032174 3300006038 Bacteria 3370
19 Ga0075368_10000161 3300006042 Bacteria 18131
20 Ga0075368_10000268 3300006042 Bacteria 14941
21 Ga0075363_100001949 3300006048 Bacteria 8195
22 Ga0075364_10013866 3300006051 Bacteria 4967
23 Ga0075432_10006461 3300006058 Bacteria 3988
24 Ga0075367_10046607 3300006178 Bacteria 2547
25 Ga0075367_10054933 3300006178 Bacteria 2362
26 Ga0068865_100028738 3300006881 Bacteria 3682
27 Ga0105243_10013892 3300009148 Bacteria 6095
28 Ga0105238_10108740 3300009551 Bacteria 2754
29 Ga0105249_10036003 3300009553 Bacteria 4490
30 Ga0105239_10002783 3300010375 Bacteria 21910
31 Ga0105246_10002989 3300011119 Bacteria 10246
32 Ga0105246_10014179 3300011119 Bacteria 5009
33 Ga0105246_10017683 3300011119 Bacteria 4534
34 Ga0157369_10049214 3300013105 Bacteria 4570
35 Ga0157372_10033382 3300013307 Bacteria 5653
36 Ga0157375_10037754 3300013308 Bacteria 4631
37 Ga0163163_10013978 3300014325 Bacteria 7367
38 Ga0157380_10033945 3300014326 Bacteria 3932
39 Ga0213875_10000079 3300021388 Bacteria 114698
40 Ga0209646_1000030 3300025246 Bacteria 384216
41 Ga0209129_1000047 3300025258 Bacteria 270566
42 Ga0209025_1000426 3300025294 Bacteria 83510
43 Ga0209051_1005840 3300025303 Bacteria 7080
44 Ga0207697_10002419 3300025315 Bacteria 9700
45 Ga0207655_1002254 3300025728 Bacteria 15944
46 Ga0207655_1019733 3300025728 Bacteria 3505
47 Ga0207647_10027070 3300025904 Bacteria 3742
48 Ga0207652_10020074 3300025921 Bacteria 5503
49 Ga0207691_10000938 3300025940 Bacteria 28954
50 Ga0207691_10001808 3300025940 Bacteria 20935
51 Ga0207708_10000683 3300026075 Bacteria 25782
52 Ga0207648_10003882 3300026089 Bacteria 15595
53 Ga0207674_10036476 3300026116 Bacteria 5121
54 Ga0207675_100001224 3300026118 Bacteria 25629
55 Ga0207698_10088215 3300026142 Bacteria 2529
56 Ga0209813_10001198 3300027866 Bacteria 5787
57 Ga0268266_10004276 3300028379 Bacteria 13745
58 Ga0268264_10000980 3300028381 Bacteria 29223
59 Ga0307405_10005471 3300031731 Bacteria 6129
60 Ga0307406_10000171 3300031901 Bacteria 38853
61 Ga0307407_10009577 3300031903 Bacteria 4520
62 Ga0307412_10006656 3300031911 Bacteria 6549
63 Ga0307409_100006167 3300031995 Bacteria 7013
64 Ga0307409_100024632 3300031995 Bacteria 4201
65 Ga0307416_100042477 3300032002 Bacteria 3549
66 Ga0307415_100007848 3300032126 Bacteria 5868
67 Ga0316574_0008042 3300035398 Bacteria 5830
68 Ga0395898_0001905 3300037466 Bacteria 26563
69 Ga0436364_0812095 3300037853 Bacteria 152428
70 Ga0395901_0007182 3300038443 Bacteria 11232
71 Ga0395901_0021590 3300038443 Bacteria 6596
72 Ga0395901_0047599 3300038443 Bacteria 4452
73 Ga0395901_0112295 3300038443 Bacteria 2862
74 Ga0439442_000049 3300042002 Bacteria 27387
75 Ga0439442_000288 3300042002 Bacteria 12293
76 Ga0450907_000508 3300042146 Bacteria 10708
77 Ga0439434_0000309 3300042435 Bacteria 13842
78 Ga0466966_0013113 3300044684 Bacteria 5487
79 Ga0466961_0011229 3300044693 Bacteria 5726
80 Ga0466964_0001514 3300044706 Bacteria 7981
81 Ga0466964_0010908 3300044706 Bacteria 3433
82 Ga0466971_0014484 3300044719 Bacteria 3470
83 Ga0466970_0004712 3300044765 Bacteria 6734
84 Ga0466957_0011994 3300044842 Bacteria 5010
85 Ga0466960_0001964 3300044901 Bacteria 7610
86 Ga0466967_0058064 3300045976 Bacteria 3418
87 Ga0495580_0029886 3300046472 Bacteria 3951
88 Ga0495676_0055764 3300047321 Bacteria 3131
89 Ga0496101_0071775 3300048904 Bacteria 2539
90 Ga0496102_0011507 3300048905 Bacteria 7631
91 Ga0496102_0012815 3300048905 Bacteria 7259
92 Ga0496102_0012856 3300048905 Bacteria 7246
93 Ga0496104_0002165 3300048907 Bacteria 17051
94 Ga0496104_0042269 3300048907 Bacteria 4276
95 Ga0496104_0078399 3300048907 Bacteria 3148
96 Ga0496105_0015301 3300048908 Bacteria 6110
97 Ga0496105_0026252 3300048908 Bacteria 4750
98 Ga0496108_0000576 3300048911 Bacteria 28680
99 Ga0496110_0021286 3300048913 Bacteria 5487
100 Ga0496111_0001698 3300048914 Bacteria 12839
101 Ga0496114_0000335 3300048917 Bacteria 34176
102 Ga0496114_0003047 3300048917 Bacteria 12832
103 Ga0496114_0038885 3300048917 Bacteria 3937
104 Ga0496114_0060509 3300048917 Bacteria 3166
105 Ga0496117_0000346 3300048920 Bacteria 81937
106 Ga0496117_0005824 3300048920 Bacteria 12765
107 Ga0496117_0013430 3300048920 Bacteria 7146
108 Ga0496118_0005019 3300048921 Bacteria 15282
109 Ga0496122_0005733 3300048925 Bacteria 14640
110 Ga0496122_0009586 3300048925 Bacteria 10149
111 Ga0496124_0004934 3300048927 Bacteria 15310
112 Ga0496124_0007978 3300048927 Bacteria 11143
113 Ga0496125_0014284 3300048928 Bacteria 7739
114 Ga0496126_0002004 3300048929 Bacteria 28815
115 Ga0496126_0027945 3300048929 Bacteria 5380
116 Ga0501321_000132 3300049537 Bacteria 3831
117 Ga0501034_0000079 3300049571 Bacteria 171105
118 Ga0501034_0007107 3300049571 Bacteria 11945
119 Ga0501037_0008030 3300049573 Bacteria 7731
120 Ga0501037_0022226 3300049573 Bacteria 4693
121 Ga0501046_0003598 3300049580 Bacteria 14198
122 Ga0501046_0003984 3300049580 Bacteria 13484
123 Ga0501046_0022426 3300049580 Bacteria 5202
124 Ga0501047_0079227 3300049581 Bacteria 3159
125 Ga0501048_0001493 3300049582 Bacteria 17753
126 Ga0501067_0028403 3300049583 Bacteria 3098
127 Ga0501070_0038051 3300049586 Bacteria 4014
128 Ga0501070_0040862 3300049586 Bacteria 3865
129 Ga0501071_0025155 3300049587 Bacteria 4169
130 Ga0501073_0018391 3300049589 Bacteria 5050
131 Ga0501074_0027007 3300049590 Bacteria 4159
132 Ga0501080_0091325 3300049742 Bacteria 2828
133 Ga0501083_0033325 3300049744 Bacteria 3528
134 Ga0501035_0001148 3300049822 Bacteria 27666
135 Ga0501044_0003581 3300049823 Bacteria 17477
136 Ga0501044_0007806 3300049823 Bacteria 11761
137 nmdc:mga0yw44_3521_c1 3300050492 Bacteria 6973
138 nmdc:mga0yw44_51495_c1 3300050492 Bacteria 2493
139 nmdc:mga04h51_6458_c1 3300050495 Bacteria 3042
140 Ga0500556_0001034 3300053104 Bacteria 14524
141 Ga0500593_000706 3300053117 Bacteria 12725
142 Ga0500616_0000078 3300053153 Bacteria 202009
143 Ga0501082_0031444 3300060353 Bacteria 4577
144 Ga0530510_0076005 3300061734 Bacteria 2440
145 2855390216 2855386786 Bacteria 4752232
146 2623588586 2622736626 Bacteria 7181580
147 2643783697 2643221553 Bacteria 3544260
148 2643876621 2643221572 Bacteria 3614809
149 2644091929 2643221615 Bacteria 5487866
150 2644197526 2643221635 Bacteria 2632343
151 2644231146 2643221641 Bacteria 4490190
152 2644321732 2643221657 Bacteria 5490246
153 2644383676 2643221669 Bacteria 3611286
154 2644679060 2643221724 Bacteria 3593515
155 2691514761 2690315906 Bacteria 4517044
156 2730228557 2728369380 Bacteria 3620317
157 2739602938 2739367653 Bacteria 2780952
158 2740166496 2739367898 Bacteria 4367674
159 2747954970 2747842429 Bacteria 3914386
160 2753301230 2751185788 Bacteria 4541048
161 2775654904 2775506735 Bacteria 4556596
162 2808827867 2808606357 Bacteria 4466944
163 2808853223 2808606360 Bacteria 4404006
164 2808878276 2808606366 Bacteria 4415912
165 2808892121 2808606370 Bacteria 4942454
166 2808897215 2808606371 Bacteria 4251511
167 2810364410 2808606700 Bacteria 3482157
168 2812320372 2811994871 Bacteria 4497550
169 2844849736 2844849076 Bacteria 4091819
170 2844854789 2844852863 Bacteria 3849151
171 2852666707 2852663356 Bacteria 4090475
172 2857481044 2857479173 Bacteria 2469263
173 2857482386 2857481737 Bacteria 4761446
174 2857634561 2857632687 Bacteria 2448521
175 2857724399 2857723135 Bacteria 4217853
176 2857729281 2857727296 Bacteria 2745552
177 2857734609 2857733635 Bacteria 3532004
178 2857741138 2857740372 Bacteria 4782044
179 2870803331 2870801768 Bacteria 2710986
180 2870805375 2870804320 Bacteria 2552467
181 2893685164 2893684298 Bacteria 2897960
182 2895660835 2895660088 Bacteria 3782833
183 2902584731 2902582711 Bacteria 6187705
184 2904430877 2904430863 Bacteria 3486923
185 2904500372 2904497146 Bacteria 4731781
186 2904503603 2904501621 Bacteria 3401437
187 2904776828 2904776348 Bacteria 4658726
188 2908675250 2908674828 Bacteria 3382763
189 2909075433 2909074476 Bacteria 3436050
190 2910812323 2910809715 Bacteria 4982797
191 2919036371 2919034639 Bacteria 4763403
192 2919039929 2919039151 Bacteria 3391018
193 2919045209 2919042368 Bacteria 3905917
194 2919059617 2919059106 Bacteria 4991624
195 2919540825 2919538618 Bacteria 4677069
196 2920882746 2920879853 Bacteria 4216831
197 2928108518 2928104781 Bacteria 3877447
198 2928501272 2928500415 Bacteria 3384541
199 2932426960 2932426870 Bacteria 4547726
200 2933419594 2933418574 Bacteria 4476724
201 2939598839 2939598168 Bacteria 4687164
202 2939650016 2939647034 Bacteria 4681660
203 2939677460 2939674588 Bacteria 4844420
204 2945918120 2945916053 Bacteria 4555517
205 2945921590 2945920336 Bacteria 4501603
206 2945942184 2945941187 Bacteria 4682474
207 2946038166 2946037020 Bacteria 4900426
208 2946061963 2946059875 Bacteria 4386623
209 2953999447 2953998280 Bacteria 4812144
210 2964327146 2964326757 Bacteria 3290868
211 2966925851 2966924647 Bacteria 3268643
212 2974306151 2974302888 Bacteria 4369871
213 2984553411 2984551494 Bacteria 3877562
214 2984578753 2984576629 Bacteria 4248407
215 2990257995 2990256926 Bacteria 4252839
216 8003860838 8003856774 Bacteria 7675274
217 8004182748 8004182704 Bacteria 3391155
218 8054108457 8054107350 Bacteria 5022511
219 8054610493 8054609563 Bacteria 5170090
220 8056038941 8056037122 Bacteria 3854319
221 8057347878 8057345674 Bacteria 4160394
222 JGI25152J39213_1001138
223 Ga0070683_100010914
224 Ga0070692_10015560
225 Ga0070659_100034211
226 Ga0070667_100009865
227 Ga0068867_100002627
228 Ga0070685_10022045
229 Ga0070684_100001907
230 Ga0070672_100003203
231 Ga0070665_100001227
232 Ga0068857_100027149
233 Ga0068854_100036812
234 Ga0068852_100016916
235 Ga0068860_100006201
236 Ga0075365_10015417
237 Ga0075365_10017446
238 Ga0075365_10019490
239 Ga0075365_10032174
240 Ga0075368_10000161
241 Ga0075368_10000268
242 Ga0075363_100001949
243 Ga0075364_10013866
244 Ga0075432_10006461
245 Ga0075367_10046607
246 Ga0075367_10054933
247 Ga0068865_100028738
248 Ga0105243_10013892
249 Ga0105238_10108740
250 Ga0105249_10036003
251 Ga0105239_10002783
252 Ga0105246_10002989
253 Ga0105246_10014179
254 Ga0105246_10017683
255 Ga0157369_10049214
256 Ga0157372_10033382
257 Ga0157375_10037754
258 Ga0163163_10013978
259 Ga0157380_10033945
260 Ga0213875_10000079
261 Ga0209646_1000030
262 Ga0209129_1000047
263 Ga0209025_1000426
264 Ga0209051_1005840
265 Ga0207697_10002419
266 Ga0207655_1002254
267 Ga0207655_1019733
268 Ga0207647_10027070
269 Ga0207652_10020074
270 Ga0207691_10000938
271 Ga0207691_10001808
272 Ga0207708_10000683
273 Ga0207648_10003882
274 Ga0207674_10036476
275 Ga0207675_100001224
276 Ga0207698_10088215
277 Ga0209813_10001198
278 Ga0268266_10004276
279 Ga0268264_10000980
280 Ga0307405_10005471
281 Ga0307406_10000171
282 Ga0307407_10009577
283 Ga0307412_10006656
284 Ga0307409_100006167
285 Ga0307409_100024632
286 Ga0307416_100042477
287 Ga0307415_100007848
288 Ga0316574_0008042
289 Ga0395898_0001905
290 Ga0436364_0812095
291 Ga0395901_0007182
292 Ga0395901_0021590
293 Ga0395901_0047599
294 Ga0395901_0112295
295 Ga0439442_000049
296 Ga0439442_000288
297 Ga0450907_000508
298 Ga0439434_0000309
299 Ga0466966_0013113
300 Ga0466961_0011229
301 Ga0466964_0001514
302 Ga0466964_0010908
303 Ga0466971_0014484
304 Ga0466970_0004712
305 Ga0466957_0011994
306 Ga0466960_0001964
307 Ga0466967_0058064
308 Ga0495580_0029886
309 Ga0495676_0055764
310 Ga0496101_0071775
311 Ga0496102_0011507
312 Ga0496102_0012815
313 Ga0496102_0012856
314 Ga0496104_0002165
315 Ga0496104_0042269
316 Ga0496104_0078399
317 Ga0496105_0015301
318 Ga0496105_0026252
319 Ga0496108_0000576
320 Ga0496110_0021286
321 Ga0496111_0001698
322 Ga0496114_0000335
323 Ga0496114_0003047
324 Ga0496114_0038885
325 Ga0496114_0060509
326 Ga0496117_0000346
327 Ga0496117_0005824
328 Ga0496117_0013430
329 Ga0496118_0005019
330 Ga0496122_0005733
331 Ga0496122_0009586
332 Ga0496124_0004934
333 Ga0496124_0007978
334 Ga0496125_0014284
335 Ga0496126_0002004
336 Ga0496126_0027945
337 Ga0501321_000132
338 Ga0501034_0000079
339 Ga0501034_0007107
340 Ga0501037_0008030
341 Ga0501037_0022226
342 Ga0501046_0003598
343 Ga0501046_0003984
344 Ga0501046_0022426
345 Ga0501047_0079227
346 Ga0501048_0001493
347 Ga0501067_0028403
348 Ga0501070_0038051
349 Ga0501070_0040862
350 Ga0501071_0025155
351 Ga0501073_0018391
352 Ga0501074_0027007
353 Ga0501080_0091325
354 Ga0501083_0033325
355 Ga0501035_0001148
356 Ga0501044_0003581
357 Ga0501044_0007806
358 nmdc:mga0yw44_3521_c1
359 nmdc:mga0yw44_51495_c1
360 nmdc:mga04h51_6458_c1
361 Ga0500556_0001034
362 Ga0500593_000706
363 Ga0500616_0000078
364 Ga0501082_0031444
365 Ga0530510_0076005
366 2855390216
367 2623588586
368 2643783697
369 2643876621
370 2644091929
371 2644197526
372 2644231146
373 2644321732
374 2644383676
375 2644679060
376 2691514761
377 2730228557
378 2739602938
379 2740166496
380 2747954970
381 2753301230
382 2775654904
383 2808827867
384 2808853223
385 2808878276
386 2808892121
387 2808897215
388 2810364410
389 2812320372
390 2844849736
391 2844854789
392 2852666707
393 2857481044
394 2857482386
395 2857634561
396 2857724399
397 2857729281
398 2857734609
399 2857741138
400 2870803331
401 2870805375
402 2893685164
403 2895660835
404 2902584731
405 2904430877
406 2904500372
407 2904503603
408 2904776828
409 2908675250
410 2909075433
411 2910812323
412 2919036371
413 2919039929
414 2919045209
415 2919059617
416 2919540825
417 2920882746
418 2928108518
419 2928501272
420 2932426960
421 2933419594
422 2939598839
423 2939650016
424 2939677460
425 2945918120
426 2945921590
427 2945942184
428 2946038166
429 2946061963
430 2953999447
431 2964327146
432 2966925851
433 2974306151
434 2984553411
435 2984578753
436 2990257995
437 8003860838
438 8004182748
439 8054108457
440 8054610493
441 8056038941
442 8057347878

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

74

201

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lcu-assembly1.cif.gz_A structure of maltooligosyltrehalose synthase from arthrobacter ramosus 0.947 4 749
6lcv-assembly1.cif.gz_A structure of mutant s44p of maltooligosyltrehalose synthase from arthrobacter ramosus 0.946 4 749
6lcu-assembly1.cif.gz_A structure of maltooligosyltrehalose synthase from arthrobacter ramosus 0.9383 4 749
6lcv-assembly1.cif.gz_A structure of mutant s44p of maltooligosyltrehalose synthase from arthrobacter ramosus 0.9373 4 749
5zcr-assembly2.cif.gz_B dsm5389 glycosyltrehalose synthase 0.869 5 750
ID Description Score Start End Superfamily
af_P9WQ21_655_765_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.906 641 750 2.60.40.1180
5zcrA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8988 5 653 3.20.20.80
1lwjB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8831 6 88 3.20.20.80
5zcrA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8753 5 653 3.20.20.80
af_P0CW41_2_118_3.30.750.90 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.8518 5 88 3.30.750.90
ID Description Score Start End GO Terms
AF-Q9LC79-F1-model_v4 Maltooligosyltrehalose synthase 0.9997 1 261 GO:0005992
GO:0030980
GO:0047470
AF-A0A0K8Q6T2-F1-model_v4 Maltooligosyl trehalose synthase 0.9976 1 346 GO:0005992
GO:0030980
GO:0047470
AF-A0A7W3PM71-F1-model_v4 Maltooligosyltrehalose synthase 0.9936 1 136 GO:0005992
GO:0030980
GO:0047470
AF-A0A7X6HAL4-F1-model_v4 deleted 0.9901 1 235
AF-A0A6B3EQQ2-F1-model_v4 Malto-oligosyltrehalose synthase 0.9898 11 124 GO:0005992
GO:0030980
GO:0047470

Map