F333557

General Info

Members Datasets Scaffolds Average Seq Length
221 154 443 224

Family's Representative Sequence

Representative Sequence 3300035114|Ga0373939_0018931|Ga0373939_0018931_284_1102
Length 255
Sequence MTSAPIETATDLTRDDEARPSPGGAGFALSAPLIPVEAARITLSDRRTQRRWQVDLGPYRIAAHQVTLAEYASVPRTPAGAKPDSVVIPPRDDPRLPVTGVSWWDTVRFCNALSEREGLEPAYRLDGDGAEWNITADGYRLPTEAEWEHACRAGTTGPRYGRLDEIAWYRDNSDERLHSVGGKLPNAWGLHDMLGNAWDWCWDLYDPEVYGSYRVLRGGGWFDEHWSCRASVRRRSHPDLRIDDVGFRLARTVGR

Samples

Sample ID Description Type Environment
1 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
15 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
16 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
17 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
18 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
19 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
28 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
29 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
30 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
31 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
32 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
33 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
34 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
35 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
36 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
37 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
38 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
39 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
40 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
41 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
42 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
43 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
44 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
45 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
46 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
47 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
48 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
49 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
50 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
51 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
52 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
53 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
54 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
55 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
56 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
57 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
58 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
59 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
60 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
65 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
66 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
67 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
68 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
69 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
70 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
71 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
72 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
73 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
74 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
75 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
78 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
79 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
80 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
81 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
82 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
83 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
84 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
85 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
88 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
89 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
92 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
93 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
94 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
97 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
98 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
99 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
100 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
101 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
102 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
103 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
113 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
114 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
115 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
116 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
117 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
118 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
119 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
120 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
121 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
122 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
123 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
124 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
125 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
126 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
127 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
128 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
129 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
130 2576861822 Frankia sp. CeD Isolate Nodule
131 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
132 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
133 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
134 2643221714 Streptomyces sp. Root264 Isolate Unclassified
135 2671180195 Frankia sp. CcI49 Isolate Nodule
136 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
137 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
138 2773857922 Frankia sp. CcI49 Isolate Nodule
139 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
140 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
141 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
142 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
143 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
144 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
145 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
146 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
147 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
148 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
149 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
150 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
151 8002775197 Frankia nepalensis CN7 Isolate Nodule
152 8002784119 Frankia sp. AgB1.9 Isolate Nodule
153 8054920844 Frankia tisae Agncl-8 Isolate Nodule
154 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.97
Metatranscriptomes 0.45
Isolates 13.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.79
Nodule 3.17
Rhizoplane 0.9
Rhizosphere 73.3
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373939_0018931 3300035114 Bacteria 1852
2 rootH1_10003327 3300003316 Bacteria 15333
3 rootH1_10003327 3300003323 Bacteria 5027
4 rootH2_10004534 3300003320 Bacteria 13099
5 rootL2_10037970 3300003322 Bacteria 10429
6 rootH1_10022664 3300003323 Bacteria 5770
7 Ga0006562J51391_1100985 3300003578 Bacteria 2336
8 Ga0070668_100014927 3300005347 Bacteria 5807
9 Ga0070667_100287634 3300005367 Bacteria 1477
10 Ga0070679_100468533 3300005530 Bacteria 1204
11 Ga0068853_100028085 3300005539 Bacteria 4732
12 Ga0068862_100155127 3300005844 Bacteria 2040
13 Ga0075365_10068325 3300006038 Bacteria 2387
14 Ga0075370_10039686 3300006353 Bacteria 2654
15 Ga0105243_10001697 3300009148 Bacteria 18983
16 Ga0105248_10179620 3300009177 Bacteria 2385
17 Ga0157375_10005922 3300013308 Bacteria 10656
18 Ga0157379_10535092 3300014968 Bacteria 1089
19 Ga0157376_10484152 3300014969 Bacteria 1213
20 Ga0207652_10678356 3300025921 Bacteria 920
21 Ga0207686_10415170 3300025934 Bacteria 1028
22 Ga0207709_10041082 3300025935 Bacteria 2774
23 Ga0207711_10488178 3300025941 Bacteria 1148
24 Ga0207668_10066058 3300025972 Bacteria 2562
25 Ga0207658_10128524 3300025986 Bacteria 2032
26 Ga0207675_100641950 3300026118 Bacteria 1067
27 Ga0268265_10041016 3300028380 Bacteria 3422
28 Ga0307517_10005623 3300028786 Bacteria 18815
29 Ga0307515_10001177 3300028794 Bacteria 59836
30 Ga0307511_10033949 3300030521 Bacteria 4491
31 Ga0307512_10112161 3300030522 Bacteria 1790
32 Ga0307509_10017674 3300031507 Bacteria 8198
33 Ga0307509_10318853 3300031507 Bacteria 1292
34 Ga0307508_10002207 3300031616 Bacteria 20770
35 Ga0307508_10013676 3300031616 Bacteria 7410
36 Ga0307508_10254150 3300031616 Bacteria 1353
37 Ga0307514_10080853 3300031649 Bacteria 2403
38 Ga0307516_10194336 3300031730 Bacteria 1753
39 Ga0307413_10320550 3300031824 Bacteria 1183
40 Ga0307507_10009696 3300033179 Bacteria 12719
41 Ga0307507_10081025 3300033179 Bacteria 2857
42 Ga0307507_10085504 3300033179 Bacteria 2743
43 Ga0307510_10012533 3300033180 Bacteria 10053
44 Ga0307510_10058018 3300033180 Bacteria 4012
45 Ga0373938_0051244 3300034957 Bacteria 944
46 Ga0373942_0014149 3300035207 Bacteria 1927
47 Ga0373962_0021449 3300035242 Bacteria 1704
48 Ga0466966_0155673 3300044684 Bacteria 1392
49 Ga0495617_041875 3300046452 Bacteria 1530
50 Ga0495592_0008101 3300046454 Bacteria 7891
51 Ga0495592_0027555 3300046454 Bacteria 4307
52 Ga0495592_0099899 3300046454 Bacteria 2069
53 Ga0495603_0003795 3300046455 Bacteria 8994
54 Ga0495603_0034165 3300046455 Bacteria 3058
55 Ga0495603_0206057 3300046455 Bacteria 1136
56 Ga0495629_0001410 3300046459 Bacteria 18951
57 Ga0495629_0005661 3300046459 Bacteria 9330
58 Ga0495629_0024595 3300046459 Bacteria 4288
59 Ga0495629_0056154 3300046459 Bacteria 2753
60 Ga0495629_0082322 3300046459 Bacteria 2246
61 Ga0495629_0501964 3300046459 Bacteria 818
62 Ga0495651_0002505 3300046462 Bacteria 14206
63 Ga0495651_0164028 3300046462 Bacteria 1589
64 Ga0495653_0162276 3300046463 Bacteria 1550
65 Ga0495580_0087280 3300046472 Bacteria 2173
66 Ga0495582_0175235 3300046473 Bacteria 1222
67 Ga0495605_0003167 3300046474 Bacteria 9890
68 Ga0495662_0002907 3300046476 Bacteria 8654
69 Ga0495662_0052902 3300046476 Bacteria 1961
70 Ga0495662_0096249 3300046476 Bacteria 1447
71 Ga0495664_0004359 3300046477 Bacteria 7736
72 Ga0495664_0013980 3300046477 Bacteria 4547
73 Ga0495664_0108858 3300046477 Bacteria 1672
74 Ga0495585_0034756 3300046492 Bacteria 2849
75 Ga0495594_0006878 3300046499 Bacteria 5849
76 Ga0495594_0006953 3300046499 Bacteria 5819
77 Ga0495607_0050872 3300046501 Bacteria 2409
78 Ga0495583_0054718 3300046506 Bacteria 1805
79 Ga0495606_0064871 3300046507 Bacteria 2322
80 Ga0495608_0022297 3300046511 Bacteria 4341
81 Ga0495608_0112605 3300046511 Bacteria 1749
82 Ga0495610_0040108 3300046512 Bacteria 2363
83 Ga0495616_0012364 3300046513 Bacteria 4849
84 Ga0495618_0059807 3300046514 Bacteria 2415
85 Ga0495618_0148160 3300046514 Bacteria 1500
86 Ga0495628_0010112 3300046516 Bacteria 8023
87 Ga0495628_0031527 3300046516 Bacteria 4287
88 Ga0495630_0032368 3300046517 Bacteria 3896
89 Ga0495630_0202560 3300046517 Bacteria 1514
90 Ga0495631_0003811 3300046518 Bacteria 8189
91 Ga0495643_0145357 3300046522 Bacteria 1179
92 Ga0495666_0026974 3300046526 Bacteria 2827
93 Ga0495666_0078288 3300046526 Bacteria 1566
94 Ga0495652_0028118 3300046529 Bacteria 4952
95 Ga0495652_0164111 3300046529 Bacteria 1721
96 Ga0495652_0272733 3300046529 Bacteria 1242
97 Ga0495640_0038011 3300046533 Bacteria 3389
98 Ga0495640_0044095 3300046533 Bacteria 3102
99 Ga0495640_0188624 3300046533 Bacteria 1311
100 Ga0495586_0010003 3300046535 Bacteria 5054
101 Ga0495587_0155689 3300046536 Bacteria 1301
102 Ga0495609_0037156 3300046538 Bacteria 2197
103 Ga0495597_0023474 3300046542 Bacteria 2852
104 Ga0495645_0116222 3300046543 Bacteria 1888
105 Ga0495622_0019405 3300046557 Bacteria 3166
106 Ga0495622_0023315 3300046557 Bacteria 2884
107 Ga0495622_0124002 3300046557 Bacteria 1179
108 Ga0495668_0007670 3300046616 Bacteria 6865
109 Ga0495634_0004563 3300046642 Bacteria 10814
110 Ga0495611_0009735 3300046648 Bacteria 4063
111 Ga0495625_0011292 3300046660 Bacteria 7295
112 Ga0495635_0012921 3300046663 Bacteria 5846
113 Ga0495635_0049444 3300046663 Bacteria 2898
114 Ga0495635_0124158 3300046663 Bacteria 1760
115 Ga0495661_0085012 3300046665 Bacteria 1814
116 Ga0495588_0238833 3300046674 Bacteria 958
117 Ga0495657_0008902 3300046675 Bacteria 7644
118 Ga0495657_0012580 3300046675 Bacteria 6279
119 Ga0495657_0020934 3300046675 Bacteria 4699
120 Ga0495657_0124268 3300046675 Bacteria 1622
121 Ga0495599_0140266 3300046678 Bacteria 1499
122 Ga0495623_0152381 3300046679 Bacteria 1365
123 Ga0495623_0183377 3300046679 Bacteria 1214
124 Ga0495646_0066047 3300046680 Bacteria 2140
125 Ga0495646_0077480 3300046680 Bacteria 1944
126 Ga0495613_0001664 3300046689 Bacteria 16910
127 Ga0495613_0016938 3300046689 Bacteria 5427
128 Ga0495613_0048192 3300046689 Bacteria 3146
129 Ga0495613_0116213 3300046689 Bacteria 1924
130 Ga0495613_0139515 3300046689 Bacteria 1733
131 Ga0495613_0449478 3300046689 Bacteria 873
132 Ga0495624_0127186 3300046690 Bacteria 1563
133 Ga0495624_0349093 3300046690 Bacteria 890
134 Ga0495671_0006570 3300046692 Bacteria 6705
135 Ga0495671_0131355 3300046692 Bacteria 1221
136 Ga0495589_0009236 3300046794 Bacteria 5129
137 Ga0495600_0070176 3300046809 Bacteria 2289
138 Ga0495660_0071740 3300046810 Bacteria 1835
139 Ga0495581_0004000 3300047315 Bacteria 8488
140 Ga0495581_0023212 3300047315 Bacteria 3594
141 Ga0495581_0124985 3300047315 Bacteria 1498
142 Ga0495581_0200045 3300047315 Bacteria 1169
143 Ga0495604_0000502 3300047317 Bacteria 34488
144 Ga0495604_0106533 3300047317 Bacteria 2050
145 Ga0495636_0004128 3300047318 Bacteria 5690
146 Ga0495636_0032591 3300047318 Bacteria 2138
147 Ga0495636_0092791 3300047318 Bacteria 1312
148 Ga0495674_0155545 3300047319 Bacteria 1915
149 Ga0495674_0325684 3300047319 Bacteria 1251
150 Ga0495676_0001590 3300047321 Bacteria 19706
151 Ga0495676_0001692 3300047321 Bacteria 19269
152 Ga0495676_0024261 3300047321 Bacteria 5254
153 Ga0495676_0071322 3300047321 Bacteria 2670
154 Ga0495687_002408 3300047443 Bacteria 15058
155 Ga0495687_004246 3300047443 Bacteria 9817
156 Ga0495687_034225 3300047443 Bacteria 2297
157 Ga0495687_158524 3300047443 Bacteria 764
158 Ga0495675_0251286 3300047444 Bacteria 1062
159 Ga0495685_001889 3300047447 Bacteria 6474
160 Ga0495685_036967 3300047447 Bacteria 1675
161 Ga0495681_0000493 3300047470 Bacteria 30292
162 Ga0495681_0083211 3300047470 Bacteria 1425
163 Ga0495684_0351759 3300047471 Bacteria 1046
164 Ga0495686_0014660 3300047472 Bacteria 5391
165 Ga0495593_0024361 3300047673 Bacteria 3355
166 Ga0495593_0081910 3300047673 Bacteria 1668
167 Ga0495602_0082401 3300048088 Bacteria 2700
168 Ga0495614_0002270 3300048089 Bacteria 8537
169 Ga0495614_0005512 3300048089 Bacteria 5707
170 Ga0495614_0012250 3300048089 Bacteria 3767
171 Ga0496102_0109504 3300048905 Bacteria 2574
172 Ga0496108_0000017 3300048911 Bacteria 235428
173 Ga0496116_0000246 3300048919 Bacteria 98506
174 Ga0496117_0030501 3300048920 Bacteria 4137
175 Ga0496118_0004867 3300048921 Bacteria 15634
176 Ga0496118_0029300 3300048921 Bacteria 4619
177 Ga0496119_0000794 3300048922 Bacteria 42302
178 nmdc:mga0yw44_26765_c2 3300050492 Bacteria 2483
179 nmdc:mga07m45_96341_c1 3300050496 Bacteria 1698
180 nmdc:mga06r32_762908_c1 3300050510 Bacteria 930
181 Ga0495619_0338988 3300053085 Bacteria 1040
182 Ga0500583_0171071 3300053092 Bacteria 1082
183 Ga0500566_0150180 3300053094 Bacteria 1226
184 Ga0500640_002778 3300053095 Bacteria 5896
185 Ga0500660_067359 3300053100 Bacteria 1695
186 Ga0500660_081972 3300053100 Bacteria 1473
187 Ga0500553_035563 3300053101 Bacteria 2468
188 Ga0500553_069297 3300053101 Bacteria 1626
189 Ga0500572_045402 3300053111 Bacteria 1291
190 Ga0500573_0191512 3300053140 Bacteria 1092
191 Ga0500603_090045 3300053150 Bacteria 900
192 Ga0500616_0104690 3300053153 Bacteria 1377
193 2515719237 2515154129 Bacteria 5584369
194 2515855964 2515154155 Bacteria 7985436
195 2516086541 2515154202 Bacteria 5471270
196 2552112417 2551306166 Bacteria 9731570
197 2554261255 2554235005 Bacteria 6457341
198 2579751501 2576861822 Bacteria 5004595
199 2585319506 2582581314 Bacteria 11452267
200 2587862439 2585428094 Bacteria 3604039
201 2644442746 2643221678 Bacteria 9540101
202 2644627651 2643221714 Bacteria 9015452
203 2671838046 2671180195 Bacteria 9757215
204 2739239687 2738543011 Bacteria 5731169
205 2753071660 2751185734 Bacteria 8863695
206 2774856202 2773857922 Bacteria 9757215
207 2811846229 2808606982 Bacteria 7791042
208 2816424803 2816332119 Bacteria 8120218
209 2816506526 2816332139 Bacteria 9138787
210 2819747146 2818991472 Bacteria 10089953
211 2832005287 2832004796 Bacteria 6538017
212 2837273187 2837268691 Bacteria 7850704
213 2866068774 2866065130 Bacteria 6518152
214 2870722893 2870721527 Bacteria 9689237
215 2889304635 2889300758 Bacteria 5690814
216 2939744979 2939743619 Bacteria 5762299
217 2990065137 2990059506 Bacteria 9321252
218 2995464487 2995463766 Bacteria 8577691
219 8002780399 8002775197 Bacteria 10728764
220 8002787790 8002784119 Bacteria 9788632
221 8054925282 8054920844 Bacteria 7068637
222 8055161463 8055157932 Bacteria 6429399
223 Ga0373939_0018931
224 rootH1_10003327
225 rootH2_10004534
226 rootL2_10037970
227 rootH1_10022664
228 Ga0006562J51391_1100985
229 Ga0070668_100014927
230 Ga0070667_100287634
231 Ga0070679_100468533
232 Ga0068853_100028085
233 Ga0068862_100155127
234 Ga0075365_10068325
235 Ga0075370_10039686
236 Ga0105243_10001697
237 Ga0105248_10179620
238 Ga0157375_10005922
239 Ga0157379_10535092
240 Ga0157376_10484152
241 Ga0207652_10678356
242 Ga0207686_10415170
243 Ga0207709_10041082
244 Ga0207711_10488178
245 Ga0207668_10066058
246 Ga0207658_10128524
247 Ga0207675_100641950
248 Ga0268265_10041016
249 Ga0307517_10005623
250 Ga0307515_10001177
251 Ga0307511_10033949
252 Ga0307512_10112161
253 Ga0307509_10017674
254 Ga0307509_10318853
255 Ga0307508_10002207
256 Ga0307508_10013676
257 Ga0307508_10254150
258 Ga0307514_10080853
259 Ga0307516_10194336
260 Ga0307413_10320550
261 Ga0307507_10009696
262 Ga0307507_10081025
263 Ga0307507_10085504
264 Ga0307510_10012533
265 Ga0307510_10058018
266 Ga0373938_0051244
267 Ga0373942_0014149
268 Ga0373962_0021449
269 Ga0466966_0155673
270 Ga0495617_041875
271 Ga0495592_0008101
272 Ga0495592_0027555
273 Ga0495592_0099899
274 Ga0495603_0003795
275 Ga0495603_0034165
276 Ga0495603_0206057
277 Ga0495629_0001410
278 Ga0495629_0005661
279 Ga0495629_0024595
280 Ga0495629_0056154
281 Ga0495629_0082322
282 Ga0495629_0501964
283 Ga0495651_0002505
284 Ga0495651_0164028
285 Ga0495653_0162276
286 Ga0495580_0087280
287 Ga0495582_0175235
288 Ga0495605_0003167
289 Ga0495662_0002907
290 Ga0495662_0052902
291 Ga0495662_0096249
292 Ga0495664_0004359
293 Ga0495664_0013980
294 Ga0495664_0108858
295 Ga0495585_0034756
296 Ga0495594_0006878
297 Ga0495594_0006953
298 Ga0495607_0050872
299 Ga0495583_0054718
300 Ga0495606_0064871
301 Ga0495608_0022297
302 Ga0495608_0112605
303 Ga0495610_0040108
304 Ga0495616_0012364
305 Ga0495618_0059807
306 Ga0495618_0148160
307 Ga0495628_0010112
308 Ga0495628_0031527
309 Ga0495630_0032368
310 Ga0495630_0202560
311 Ga0495631_0003811
312 Ga0495643_0145357
313 Ga0495666_0026974
314 Ga0495666_0078288
315 Ga0495652_0028118
316 Ga0495652_0164111
317 Ga0495652_0272733
318 Ga0495640_0038011
319 Ga0495640_0044095
320 Ga0495640_0188624
321 Ga0495586_0010003
322 Ga0495587_0155689
323 Ga0495609_0037156
324 Ga0495597_0023474
325 Ga0495645_0116222
326 Ga0495622_0019405
327 Ga0495622_0023315
328 Ga0495622_0124002
329 Ga0495668_0007670
330 Ga0495634_0004563
331 Ga0495611_0009735
332 Ga0495625_0011292
333 Ga0495635_0012921
334 Ga0495635_0049444
335 Ga0495635_0124158
336 Ga0495661_0085012
337 Ga0495588_0238833
338 Ga0495657_0008902
339 Ga0495657_0012580
340 Ga0495657_0020934
341 Ga0495657_0124268
342 Ga0495599_0140266
343 Ga0495623_0152381
344 Ga0495623_0183377
345 Ga0495646_0066047
346 Ga0495646_0077480
347 Ga0495613_0001664
348 Ga0495613_0016938
349 Ga0495613_0048192
350 Ga0495613_0116213
351 Ga0495613_0139515
352 Ga0495613_0449478
353 Ga0495624_0127186
354 Ga0495624_0349093
355 Ga0495671_0006570
356 Ga0495671_0131355
357 Ga0495589_0009236
358 Ga0495600_0070176
359 Ga0495660_0071740
360 Ga0495581_0004000
361 Ga0495581_0023212
362 Ga0495581_0124985
363 Ga0495581_0200045
364 Ga0495604_0000502
365 Ga0495604_0106533
366 Ga0495636_0004128
367 Ga0495636_0032591
368 Ga0495636_0092791
369 Ga0495674_0155545
370 Ga0495674_0325684
371 Ga0495676_0001590
372 Ga0495676_0001692
373 Ga0495676_0024261
374 Ga0495676_0071322
375 Ga0495687_002408
376 Ga0495687_004246
377 Ga0495687_034225
378 Ga0495687_158524
379 Ga0495675_0251286
380 Ga0495685_001889
381 Ga0495685_036967
382 Ga0495681_0000493
383 Ga0495681_0083211
384 Ga0495684_0351759
385 Ga0495686_0014660
386 Ga0495593_0024361
387 Ga0495593_0081910
388 Ga0495602_0082401
389 Ga0495614_0002270
390 Ga0495614_0005512
391 Ga0495614_0012250
392 Ga0496102_0109504
393 Ga0496108_0000017
394 Ga0496116_0000246
395 Ga0496117_0030501
396 Ga0496118_0004867
397 Ga0496118_0029300
398 Ga0496119_0000794
399 nmdc:mga0yw44_26765_c2
400 nmdc:mga07m45_96341_c1
401 nmdc:mga06r32_762908_c1
402 Ga0495619_0338988
403 Ga0500583_0171071
404 Ga0500566_0150180
405 Ga0500640_002778
406 Ga0500660_067359
407 Ga0500660_081972
408 Ga0500553_035563
409 Ga0500553_069297
410 Ga0500572_045402
411 Ga0500573_0191512
412 Ga0500603_090045
413 Ga0500616_0104690
414 2515719237
415 2515855964
416 2516086541
417 2552112417
418 2554261255
419 2579751501
420 2585319506
421 2587862439
422 2644442746
423 2644627651
424 2671838046
425 2739239687
426 2753071660
427 2774856202
428 2811846229
429 2816424803
430 2816506526
431 2819747146
432 2832005287
433 2837273187
434 2866068774
435 2870722893
436 2889304635
437 2939744979
438 2990065137
439 2995464487
440 8002780399
441 8002787790
442 8054925282
443 8055161463

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03781

FGE-sulfatase

Sulfatase-modifying factor enzyme 1

40

251

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2y3c-assembly1.cif.gz_A treponema denticola variable protein 1 0.8069 1 212
2y3c-assembly1.cif.gz_A treponema denticola variable protein 1 0.8034 1 212
5aoh-assembly2.cif.gz_B crystal structure of carf 0.7392 2 212
5aoh-assembly1.cif.gz_A crystal structure of carf 0.7392 2 212
5aoh-assembly1.cif.gz_A crystal structure of carf 0.7328 2 212
ID Description Score Start End Superfamily
2y3cA00 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.7964 1 212 3.90.1580.10
2y3cA00 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.793 1 212 3.90.1580.10
af_Q9LVA8_1_225_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7353 6 24 3.40.50.150
af_A0A1D6HRP7_98_231_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7125 5 24 3.40.50.150
af_Q4DUQ4_953_1179_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6866 6 29 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A7W7TMG2-F1-model_v4 deleted 0.9003 1 106
AF-T0HUE3-F1-model_v4 Sulfatase-modifying factor enzyme domain-containing protein 0.897 2 124 GO:0120147
AF-C3H1Y2-F1-model_v4 deleted 0.8925 2 93
AF-A0A226R2S7-F1-model_v4 deleted 0.8892 2 77
AF-A0A171D9E8-F1-model_v4 Cytoplasmic protein 0.8792 1 99

Map