F333344

General Info

Members Datasets Scaffolds Average Seq Length
221 186 442 253

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10000018|Ga0105248_10000018121
Length 295
Sequence VGDGFDDLVAEADAAPVDGWDFSWLDGRATEQRPSWRYAHAMGERMAQAAVALDIQTGGGEVLATVPRLAPRTVATESWRPNLSRAAALLGPRGVAVVAADDGTTLPFAADTFDLVVSRHPVTTCWDEIGRVLTPEGSYFSQQVGPASVGELVEFFLGPQPARSRLQRHPDRARAAAEGAGLQVVDLQVESLHTEFRDVGAVIYFLRKVIWMVPNFTVDEYRPRLRALHDHIQARGPFQAHTVRFLIEARKPGRTGPKRPASDARGAASDTDFRGDGCAGCDAGRSPRRRGFPRG

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
39 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
66 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
67 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
72 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
73 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
74 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
75 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
76 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
77 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
78 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
79 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
80 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
81 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
88 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
92 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
93 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
106 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
107 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
108 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 2547132424 Nocardia nova SH22a Isolate Unclassified
152 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
153 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
154 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
155 2619618881 Frankia sp. ACN1ag Isolate Unclassified
156 2619619003 Frankia sp. CpI1-P Isolate Nodule
157 2626541554 Frankia sp. AvcI.1 Isolate Nodule
158 2643221548 Streptomyces sp. Root55 Isolate Unclassified
159 2643221578 Streptomyces sp. Root63 Isolate Unclassified
160 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
161 2643221613 Oerskovia sp. Root22 Isolate Unclassified
162 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
163 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
164 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
165 2643221721 Oerskovia sp. Root918 Isolate Unclassified
166 2671180195 Frankia sp. CcI49 Isolate Nodule
167 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
168 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
169 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
170 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
171 2773857922 Frankia sp. CcI49 Isolate Nodule
172 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
173 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
174 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
175 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
176 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
177 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
178 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
179 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
180 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
181 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
182 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
183 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
184 8054920844 Frankia tisae Agncl-8 Isolate Nodule
185 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule
186 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.71
Metatranscriptomes 0
Isolates 16.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.62
Nodule 4.07
Rhizoplane 4.07
Rhizosphere 74.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10000018 3300009177 Bacteria 294894
2 JGI25406J46586_10000889 3300003203 Bacteria 14054
3 rootH2_10086601 3300003320 Bacteria 2602
4 JGI25160J50197_1009751 3300003354 Bacteria 3531
5 JGI25160J50197_1032438 3300003354 Bacteria 1327
6 Ga0068869_100271055 3300005334 Bacteria 1362
7 Ga0070668_100001354 3300005347 Bacteria 17526
8 Ga0070714_100311685 3300005435 Bacteria 1469
9 Ga0070713_100079843 3300005436 Bacteria 2788
10 Ga0070710_10029356 3300005437 Bacteria 2950
11 Ga0070711_100085352 3300005439 Bacteria 2261
12 Ga0070700_100034427 3300005441 Bacteria 3060
13 Ga0070685_10200035 3300005466 Bacteria 1298
14 Ga0070707_100114645 3300005468 Bacteria 2615
15 Ga0068855_100750563 3300005563 Bacteria 1040
16 Ga0068857_100104691 3300005577 Bacteria 2540
17 Ga0068856_100090088 3300005614 Bacteria 3051
18 Ga0068863_100399130 3300005841 Bacteria 1345
19 Ga0068858_100336659 3300005842 Bacteria 1444
20 Ga0068858_100491577 3300005842 Bacteria 1185
21 Ga0081455_10001141 3300005937 Bacteria 33226
22 Ga0081539_10000254 3300005985 Bacteria 123532
23 Ga0070717_10267671 3300006028 Bacteria 1513
24 Ga0070717_10353354 3300006028 Bacteria 1314
25 Ga0070712_100197925 3300006175 Bacteria 1576
26 Ga0075370_10082312 3300006353 Bacteria 1851
27 Ga0075370_10294394 3300006353 Bacteria 965
28 Ga0075436_100170067 3300006914 Bacteria 1539
29 Ga0105245_10425971 3300009098 Bacteria 1331
30 Ga0105247_10000090 3300009101 Bacteria 98558
31 Ga0105247_10172415 3300009101 Bacteria 1439
32 Ga0105248_10011622 3300009177 Bacteria 9699
33 Ga0105237_10297349 3300009545 Bacteria 1617
34 Ga0105239_10390837 3300010375 Bacteria 1573
35 Ga0105246_10199109 3300011119 Bacteria 1556
36 Ga0157369_10086703 3300013105 Bacteria 3343
37 Ga0157374_10194042 3300013296 Bacteria 1987
38 Ga0157375_10756823 3300013308 Bacteria 1122
39 Ga0163163_10597074 3300014325 Bacteria 1167
40 Ga0157377_10300913 3300014745 Bacteria 1058
41 Ga0157379_10295987 3300014968 Bacteria 1474
42 Ga0157376_10170581 3300014969 Bacteria 1981
43 Ga0213876_10012703 3300021384 Bacteria 4478
44 Ga0207426_1003649 3300025302 Bacteria 8130
45 Ga0207426_1010527 3300025302 Bacteria 3584
46 Ga0207692_10127640 3300025898 Bacteria 1432
47 Ga0207710_10000105 3300025900 Bacteria 105872
48 Ga0207671_10202598 3300025914 Bacteria 1550
49 Ga0207663_10139154 3300025916 Bacteria 1688
50 Ga0207646_10082913 3300025922 Bacteria 2868
51 Ga0207694_10116151 3300025924 Bacteria 2133
52 Ga0207700_10206669 3300025928 Bacteria 1657
53 Ga0207665_10193492 3300025939 Bacteria 1479
54 Ga0207711_10000062 3300025941 Bacteria 125048
55 Ga0207711_10369779 3300025941 Bacteria 1329
56 Ga0207689_10518320 3300025942 Bacteria 1000
57 Ga0207679_10304685 3300025945 Bacteria 1374
58 Ga0207658_10019516 3300025986 Bacteria 4689
59 Ga0207703_10213428 3300026035 Bacteria 1722
60 Ga0207703_10477148 3300026035 Bacteria 1168
61 Ga0207708_10285944 3300026075 Bacteria 1337
62 Ga0207702_10905081 3300026078 Bacteria 874
63 Ga0207641_10111029 3300026088 Bacteria 2431
64 Ga0207641_10391264 3300026088 Bacteria 1333
65 Ga0207674_10079372 3300026116 Bacteria 3286
66 Ga0268266_10263455 3300028379 Bacteria 1598
67 Ga0307515_10000088 3300028794 Bacteria 215810
68 Ga0307515_10081314 3300028794 Bacteria 4210
69 Ga0307515_10098877 3300028794 Bacteria 3548
70 Ga0265338_10000721 3300028800 Bacteria 56528
71 Ga0307512_10016906 3300030522 Bacteria 6716
72 Ga0265325_10003452 3300031241 Bacteria 10313
73 Ga0265339_10002869 3300031249 Bacteria 12203
74 Ga0265316_10065138 3300031344 Bacteria 2822
75 Ga0307509_10016356 3300031507 Bacteria 8587
76 Ga0307509_10245877 3300031507 Bacteria 1577
77 Ga0307508_10272680 3300031616 Bacteria 1286
78 Ga0307516_10002127 3300031730 Bacteria 26826
79 Ga0307413_10021782 3300031824 Bacteria 3440
80 Ga0307407_10013180 3300031903 Bacteria 4001
81 Ga0307409_100010478 3300031995 Bacteria 5769
82 Ga0307416_100374519 3300032002 Bacteria 1451
83 Ga0307415_100055212 3300032126 Bacteria 2716
84 Ga0307507_10012722 3300033179 Bacteria 10341
85 Ga0373934_0101416 3300035086 Bacteria 1164
86 Ga0373944_0074708 3300035089 Bacteria 1110
87 Ga0373951_0000030 3300035091 Bacteria 55965
88 Ga0373936_0133701 3300035113 Bacteria 1067
89 Ga0373945_0085822 3300035116 Bacteria 1212
90 Ga0373945_0142487 3300035116 Bacteria 967
91 Ga0373953_0048357 3300035117 Bacteria 1713
92 Ga0373957_0123505 3300035120 Bacteria 1049
93 Ga0373943_0261473 3300035170 Bacteria 974
94 Ga0373962_0000697 3300035242 Bacteria 7586
95 Ga0373924_0010831 3300035410 Bacteria 3374
96 Ga0373935_0031374 3300035692 Bacteria 3297
97 Ga0373927_0182266 3300035695 Bacteria 1377
98 Ga0373947_0461840 3300035725 Bacteria 860
99 Ga0373925_0125353 3300037068 Bacteria 1997
100 Ga0436365_1279405 3300039437 Bacteria 4443
101 Ga0451837_1497016 3300041494 Bacteria 1334
102 Ga0466968_0088439 3300044735 Bacteria 1369
103 Ga0466960_0052241 3300044901 Bacteria 1977
104 Ga0495592_0029515 3300046454 Bacteria 4152
105 Ga0495603_0028293 3300046455 Bacteria 3380
106 Ga0495629_0000763 3300046459 Bacteria 25923
107 Ga0495629_0032959 3300046459 Bacteria 3666
108 Ga0495629_0129670 3300046459 Bacteria 1756
109 Ga0495641_0032421 3300046461 Bacteria 2487
110 Ga0495651_0011076 3300046462 Bacteria 6934
111 Ga0495651_0052324 3300046462 Bacteria 3145
112 Ga0495653_0012186 3300046463 Bacteria 7015
113 Ga0495653_0063608 3300046463 Bacteria 2783
114 Ga0495580_0010235 3300046472 Bacteria 7315
115 Ga0495580_0129967 3300046472 Bacteria 1747
116 Ga0495664_0000977 3300046477 Bacteria 14706
117 Ga0495664_0375867 3300046477 Bacteria 855
118 Ga0495585_0025883 3300046492 Bacteria 3356
119 Ga0495594_0034056 3300046499 Bacteria 2770
120 Ga0495608_0013239 3300046511 Bacteria 5722
121 Ga0495618_0389461 3300046514 Bacteria 854
122 Ga0495628_0047302 3300046516 Bacteria 3414
123 Ga0495628_0058895 3300046516 Bacteria 3017
124 Ga0495630_0183586 3300046517 Bacteria 1595
125 Ga0495630_0352373 3300046517 Bacteria 1126
126 Ga0495652_0036914 3300046529 Bacteria 4243
127 Ga0495640_0049116 3300046533 Bacteria 2911
128 Ga0495640_0299646 3300046533 Bacteria 998
129 Ga0495587_0002504 3300046536 Bacteria 12263
130 Ga0495645_0333988 3300046543 Bacteria 980
131 Ga0495622_0074153 3300046557 Bacteria 1569
132 Ga0495667_0041788 3300046559 Bacteria 3039
133 Ga0495634_0061907 3300046642 Bacteria 2486
134 Ga0495635_0055776 3300046663 Bacteria 2721
135 Ga0495635_0057318 3300046663 Bacteria 2680
136 Ga0495657_0017199 3300046675 Bacteria 5253
137 Ga0495646_0100787 3300046680 Bacteria 1656
138 Ga0495613_0002699 3300046689 Bacteria 13319
139 Ga0495613_0006517 3300046689 Bacteria 8723
140 Ga0495613_0061617 3300046689 Bacteria 2746
141 Ga0495600_0058709 3300046809 Bacteria 2513
142 Ga0495600_0083442 3300046809 Bacteria 2085
143 Ga0495581_0082366 3300047315 Bacteria 1864
144 Ga0495604_0019162 3300047317 Bacteria 5479
145 Ga0495674_0091712 3300047319 Bacteria 2594
146 Ga0495674_0268816 3300047319 Bacteria 1399
147 Ga0495676_0001758 3300047321 Bacteria 18924
148 Ga0495676_0003962 3300047321 Bacteria 13484
149 Ga0495680_0004087 3300047322 Bacteria 14056
150 Ga0495675_0015474 3300047444 Bacteria 4823
151 Ga0495675_0018469 3300047444 Bacteria 4426
152 Ga0495675_0056779 3300047444 Bacteria 2482
153 Ga0495684_0016083 3300047471 Bacteria 5759
154 Ga0495684_0121642 3300047471 Bacteria 1965
155 Ga0495593_0077738 3300047673 Bacteria 1719
156 Ga0495602_0060995 3300048088 Bacteria 3282
157 Ga0496102_0192515 3300048905 Bacteria 1922
158 Ga0496104_0333583 3300048907 Bacteria 1429
159 Ga0496104_0601779 3300048907 Bacteria 1009
160 Ga0496105_0025548 3300048908 Bacteria 4809
161 Ga0496107_0184616 3300048910 Bacteria 1549
162 Ga0496108_0005696 3300048911 Bacteria 10084
163 Ga0496110_0090358 3300048913 Bacteria 2738
164 Ga0496112_0310079 3300048915 Bacteria 1523
165 Ga0496115_0404135 3300048918 Bacteria 1108
166 Ga0496117_0014408 3300048920 Bacteria 6812
167 Ga0496118_0041429 3300048921 Bacteria 3646
168 Ga0496119_0000445 3300048922 Bacteria 56425
169 Ga0496120_0006529 3300048923 Bacteria 8933
170 Ga0501034_0122263 3300049571 Bacteria 2589
171 Ga0501036_0024897 3300049572 Bacteria 5048
172 Ga0501036_0037324 3300049572 Bacteria 4111
173 Ga0501038_0005026 3300049574 Bacteria 12284
174 Ga0501043_0189394 3300049579 Bacteria 1600
175 Ga0501072_0059770 3300049588 Bacteria 3005
176 Ga0501075_0638853 3300049591 Bacteria 812
177 Ga0501080_0163218 3300049742 Bacteria 2057
178 Ga0501045_0351633 3300049824 Bacteria 1097
179 nmdc:mga07m45_161329_c1 3300050496 Bacteria 1301
180 nmdc:mga08x19_276338_c1 3300050514 Bacteria 1163
181 Ga0495601_0185068 3300053077 Bacteria 1361
182 Ga0495595_0078096 3300053084 Bacteria 1573
183 Ga0495619_0050199 3300053085 Bacteria 2753
184 Ga0495619_0419343 3300053085 Bacteria 923
185 Ga0500616_0006299 3300053153 Bacteria 7799
186 2548692624 2547132424 Bacteria 8348532
187 2579854284 2579778521 Bacteria 7624758
188 2585296238 2582581312 Bacteria 7308206
189 2616900267 2616644941 Bacteria 8510691
190 2619853180 2619618881 Bacteria 7521104
191 2620350424 2619619003 Bacteria 7619552
192 2626639511 2626541554 Bacteria 7741902
193 2643763696 2643221548 Bacteria 8053412
194 2643903260 2643221578 Bacteria 9213798
195 2643946999 2643221587 Bacteria 7586415
196 2644082461 2643221613 Bacteria 4622396
197 2644404229 2643221673 Bacteria 9196637
198 2644433529 2643221677 Bacteria 7584031
199 2644461869 2643221682 Bacteria 6743283
200 2644665316 2643221721 Bacteria 4486924
201 2671836002 2671180195 Bacteria 9757215
202 2676198841 2675902999 Bacteria 9438463
203 2686538698 2684623035 Bacteria 8032739
204 2753269690 2751185782 Bacteria 11227053
205 2774843419 2773857921 Bacteria 9435764
206 2774854158 2773857922 Bacteria 9757215
207 2819741820 2818991472 Bacteria 10089953
208 2857732289 2857729791 Bacteria 4040535
209 2862185023 2862178590 Bacteria 8583590
210 2875396342 2875391855 Bacteria 7600475
211 2912762445 2912757875 Bacteria 7940295
212 2928124819 2928121344 Bacteria 3972376
213 2935892003 2935890801 Bacteria 4593001
214 2946048259 2946045630 Bacteria 8527308
215 8003316625 8003314358 Bacteria 10575343
216 8025484687 8025478263 Bacteria 8209203
217 8025537642 8025530807 Bacteria 8495698
218 8054919237 8054913762 Bacteria 7713009
219 8054921363 8054920844 Bacteria 7068637
220 8055161687 8055157932 Bacteria 6429399
221 8056671100 8056667051 Bacteria 6953971
222 Ga0105248_10000018
223 JGI25406J46586_10000889
224 rootH2_10086601
225 JGI25160J50197_1009751
226 JGI25160J50197_1032438
227 Ga0068869_100271055
228 Ga0070668_100001354
229 Ga0070714_100311685
230 Ga0070713_100079843
231 Ga0070710_10029356
232 Ga0070711_100085352
233 Ga0070700_100034427
234 Ga0070685_10200035
235 Ga0070707_100114645
236 Ga0068855_100750563
237 Ga0068857_100104691
238 Ga0068856_100090088
239 Ga0068863_100399130
240 Ga0068858_100336659
241 Ga0068858_100491577
242 Ga0081455_10001141
243 Ga0081539_10000254
244 Ga0070717_10267671
245 Ga0070717_10353354
246 Ga0070712_100197925
247 Ga0075370_10082312
248 Ga0075370_10294394
249 Ga0075436_100170067
250 Ga0105245_10425971
251 Ga0105247_10000090
252 Ga0105247_10172415
253 Ga0105248_10011622
254 Ga0105237_10297349
255 Ga0105239_10390837
256 Ga0105246_10199109
257 Ga0157369_10086703
258 Ga0157374_10194042
259 Ga0157375_10756823
260 Ga0163163_10597074
261 Ga0157377_10300913
262 Ga0157379_10295987
263 Ga0157376_10170581
264 Ga0213876_10012703
265 Ga0207426_1003649
266 Ga0207426_1010527
267 Ga0207692_10127640
268 Ga0207710_10000105
269 Ga0207671_10202598
270 Ga0207663_10139154
271 Ga0207646_10082913
272 Ga0207694_10116151
273 Ga0207700_10206669
274 Ga0207665_10193492
275 Ga0207711_10000062
276 Ga0207711_10369779
277 Ga0207689_10518320
278 Ga0207679_10304685
279 Ga0207658_10019516
280 Ga0207703_10213428
281 Ga0207703_10477148
282 Ga0207708_10285944
283 Ga0207702_10905081
284 Ga0207641_10111029
285 Ga0207641_10391264
286 Ga0207674_10079372
287 Ga0268266_10263455
288 Ga0307515_10000088
289 Ga0307515_10081314
290 Ga0307515_10098877
291 Ga0265338_10000721
292 Ga0307512_10016906
293 Ga0265325_10003452
294 Ga0265339_10002869
295 Ga0265316_10065138
296 Ga0307509_10016356
297 Ga0307509_10245877
298 Ga0307508_10272680
299 Ga0307516_10002127
300 Ga0307413_10021782
301 Ga0307407_10013180
302 Ga0307409_100010478
303 Ga0307416_100374519
304 Ga0307415_100055212
305 Ga0307507_10012722
306 Ga0373934_0101416
307 Ga0373944_0074708
308 Ga0373951_0000030
309 Ga0373936_0133701
310 Ga0373945_0085822
311 Ga0373945_0142487
312 Ga0373953_0048357
313 Ga0373957_0123505
314 Ga0373943_0261473
315 Ga0373962_0000697
316 Ga0373924_0010831
317 Ga0373935_0031374
318 Ga0373927_0182266
319 Ga0373947_0461840
320 Ga0373925_0125353
321 Ga0436365_1279405
322 Ga0451837_1497016
323 Ga0466968_0088439
324 Ga0466960_0052241
325 Ga0495592_0029515
326 Ga0495603_0028293
327 Ga0495629_0000763
328 Ga0495629_0032959
329 Ga0495629_0129670
330 Ga0495641_0032421
331 Ga0495651_0011076
332 Ga0495651_0052324
333 Ga0495653_0012186
334 Ga0495653_0063608
335 Ga0495580_0010235
336 Ga0495580_0129967
337 Ga0495664_0000977
338 Ga0495664_0375867
339 Ga0495585_0025883
340 Ga0495594_0034056
341 Ga0495608_0013239
342 Ga0495618_0389461
343 Ga0495628_0047302
344 Ga0495628_0058895
345 Ga0495630_0183586
346 Ga0495630_0352373
347 Ga0495652_0036914
348 Ga0495640_0049116
349 Ga0495640_0299646
350 Ga0495587_0002504
351 Ga0495645_0333988
352 Ga0495622_0074153
353 Ga0495667_0041788
354 Ga0495634_0061907
355 Ga0495635_0055776
356 Ga0495635_0057318
357 Ga0495657_0017199
358 Ga0495646_0100787
359 Ga0495613_0002699
360 Ga0495613_0006517
361 Ga0495613_0061617
362 Ga0495600_0058709
363 Ga0495600_0083442
364 Ga0495581_0082366
365 Ga0495604_0019162
366 Ga0495674_0091712
367 Ga0495674_0268816
368 Ga0495676_0001758
369 Ga0495676_0003962
370 Ga0495680_0004087
371 Ga0495675_0015474
372 Ga0495675_0018469
373 Ga0495675_0056779
374 Ga0495684_0016083
375 Ga0495684_0121642
376 Ga0495593_0077738
377 Ga0495602_0060995
378 Ga0496102_0192515
379 Ga0496104_0333583
380 Ga0496104_0601779
381 Ga0496105_0025548
382 Ga0496107_0184616
383 Ga0496108_0005696
384 Ga0496110_0090358
385 Ga0496112_0310079
386 Ga0496115_0404135
387 Ga0496117_0014408
388 Ga0496118_0041429
389 Ga0496119_0000445
390 Ga0496120_0006529
391 Ga0501034_0122263
392 Ga0501036_0024897
393 Ga0501036_0037324
394 Ga0501038_0005026
395 Ga0501043_0189394
396 Ga0501072_0059770
397 Ga0501075_0638853
398 Ga0501080_0163218
399 Ga0501045_0351633
400 nmdc:mga07m45_161329_c1
401 nmdc:mga08x19_276338_c1
402 Ga0495601_0185068
403 Ga0495595_0078096
404 Ga0495619_0050199
405 Ga0495619_0419343
406 Ga0500616_0006299
407 2548692624
408 2579854284
409 2585296238
410 2616900267
411 2619853180
412 2620350424
413 2626639511
414 2643763696
415 2643903260
416 2643946999
417 2644082461
418 2644404229
419 2644433529
420 2644461869
421 2644665316
422 2671836002
423 2676198841
424 2686538698
425 2753269690
426 2774843419
427 2774854158
428 2819741820
429 2857732289
430 2862185023
431 2875396342
432 2912762445
433 2928124819
434 2935892003
435 2946048259
436 8003316625
437 8025484687
438 8025537642
439 8054919237
440 8054921363
441 8055161687
442 8056671100

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

53

141

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cjq-assembly2.cif.gz_D ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 in space group p212121 0.7741 40 187
3cjr-assembly1.cif.gz_A ribosomal protein l11 methyltransferase (prma) in complex with ribosomal protein l11 (k39a) and inhibitor sinefungin. 0.7716 40 187
2nxj-assembly2.cif.gz_B t.thermophilus ribosomal protein l11 methyltransferase (prma) in space group p 21 21 2 0.7701 40 187
2nxe-assembly2.cif.gz_B t. thermophilus ribosomal protein l11 methyltransferase (prma) in complex with s-adenosyl-l-methionine 0.7683 40 187
2zbp-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methyltransferase from thermus thermophilus in complex with s-adenosyl-l-methionine 0.7662 40 187
ID Description Score Start End Superfamily
af_O06593_25_194_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9741 27 194 3.40.50.150
af_O06593_25_194_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9573 27 194 3.40.50.150
af_Q562C4_44_226_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7991 41 143 3.40.50.150
af_P25087_39_327_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.795 41 145 3.40.50.150
af_K7LTE4_237_888_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7838 41 103 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A3N6GGC8-F1-model_v4 Methyltransferase domain protein 0.9967 7 251 GO:0008757
GO:0032259
AF-A0A7K2Z2M1-F1-model_v4 Methyltransferase domain-containing protein 0.9955 5 251 GO:0008757
GO:0032259
AF-A0A370BKJ8-F1-model_v4 Class I SAM-dependent methyltransferase 0.9933 6 251 GO:0008757
GO:0032259
AF-A0A4R6PW36-F1-model_v4 Methyltransferase family protein 0.9933 5 251 GO:0008757
GO:0032259
AF-A0A1H3TFJ4-F1-model_v4 Methyltransferase type 11 domain-containing protein 0.9921 5 249 GO:0008757

Map