F332698

General Info

Members Datasets Scaffolds Average Seq Length
220 154 216 349

Family's Representative Sequence

Representative Sequence 3300049572|Ga0501036_0119783|Ga0501036_0119783_443_1681
Length 412
Sequence MAIQIGVPLTRLLRLRRLRKAPCFRFPGVSPFIRIESFFMTSFSTKTAGLGFALLGCLLVASCGRGAPPKMPPPTVGVVIVKAEPVQLTAELPGRTDSFAVSEVRPQVSGILLKRLFVEGSMVKAGQPLYQIDPAPYKAAYDNAAAALVTARAKARRYAALLKLSAVAPQDYDDAVAAYKQASANAQAARINLDRTRIVAPISGRIGRSSVTEGALVTSDQTNALAVIQTLDPIYVDITQSSVELLNLKQAMQAGGVSPDKDAPATLTLDNGTKYPVQGTLQFSEVTVDQTTGAVTLRALFPNPNNLLLPGMFVRATVAEGTQNNAILVPQQGVSRNEKGDPTALVVDGKGFARLRILKTSRAIGDKWLVTDGLKPGDKVIVEGLQKVQPDMPVHAVPASFIKPAQAKPGAH

Samples

Sample ID Description Type Environment
1 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
2 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
3 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
4 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
5 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
35 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
56 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
86 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
96 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
97 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
98 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
102 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
103 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
106 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
107 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
108 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
109 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
110 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
111 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
114 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
115 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
118 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
119 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
124 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
150 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
151 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
152 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
153 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.18
Metatranscriptomes 0
Isolates 1.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.55
Nodule 0.45
Rhizoplane 3.18
Rhizosphere 86.82
Stem 0
Stem Tuber 0
Unclassified 5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1007903 3300002705 Bacteria 2736
2 rootH2_10009015 3300003320 Bacteria 18262
3 Ga0055535_1000052 3300003761 Bacteria 132513
4 Ga0055529_1000365 3300003763 Bacteria 49102
5 Ga0070658_10003709 3300005327 Bacteria 12492
6 Ga0070680_100000131 3300005336 Bacteria 44894
7 Ga0070680_100015857 3300005336 Bacteria 5915
8 Ga0068868_100034799 3300005338 Bacteria 3891
9 Ga0070660_100005920 3300005339 Bacteria 8457
10 Ga0070660_100089961 3300005339 Bacteria 2419
11 Ga0070691_10039718 3300005341 Bacteria 2223
12 Ga0070692_10066270 3300005345 Bacteria 1914
13 Ga0070671_100005924 3300005355 Bacteria 9744
14 Ga0070671_100065181 3300005355 Bacteria 3034
15 Ga0070659_100004726 3300005366 Bacteria 9725
16 Ga0070667_100005652 3300005367 Bacteria 10440
17 Ga0070714_100000055 3300005435 Bacteria 103321
18 Ga0070713_100002353 3300005436 Bacteria 12341
19 Ga0070705_100045360 3300005440 Bacteria 2529
20 Ga0070678_100027079 3300005456 Bacteria 3887
21 Ga0070662_100034868 3300005457 Bacteria 3551
22 Ga0070681_10000021 3300005458 Bacteria 116877
23 Ga0070681_10064038 3300005458 Bacteria 3648
24 Ga0070681_10089826 3300005458 Bacteria 3023
25 Ga0070679_100000848 3300005530 Bacteria 26636
26 Ga0070679_100013401 3300005530 Bacteria 7851
27 Ga0070679_100029137 3300005530 Bacteria 5445
28 Ga0068853_100005165 3300005539 Bacteria 10205
29 Ga0068853_100045713 3300005539 Bacteria 3751
30 Ga0070693_100097433 3300005547 Bacteria 1785
31 Ga0070665_100000397 3300005548 Bacteria 64128
32 Ga0070665_100050476 3300005548 Bacteria 4174
33 Ga0068855_100000006 3300005563 Bacteria 298092
34 Ga0068855_100022040 3300005563 Bacteria 7636
35 Ga0068856_100025535 3300005614 Bacteria 5761
36 Ga0068858_100008461 3300005842 Bacteria 9891
37 Ga0068860_100053940 3300005843 Bacteria 3821
38 Ga0070716_100006821 3300006173 Bacteria 5597
39 Ga0070712_100007898 3300006175 Bacteria 6669
40 Ga0105251_10005969 3300009011 Bacteria 7863
41 Ga0105251_10006146 3300009011 Bacteria 7728
42 Ga0105251_10010806 3300009011 Bacteria 5262
43 Ga0105244_10014851 3300009036 Bacteria 4486
44 Ga0105240_10000080 3300009093 Bacteria 195633
45 Ga0105240_10011242 3300009093 Bacteria 12482
46 Ga0105240_10030567 3300009093 Bacteria 6998
47 Ga0105240_10036753 3300009093 Bacteria 6297
48 Ga0105240_10149086 3300009093 Bacteria 2788
49 Ga0105245_10002609 3300009098 Bacteria 16244
50 Ga0105247_10010271 3300009101 Bacteria 5667
51 Ga0105243_10015328 3300009148 Bacteria 5798
52 Ga0105241_10281737 3300009174 Bacteria 1420
53 Ga0105242_10003685 3300009176 Bacteria 11923
54 Ga0105248_10000015 3300009177 Bacteria 322959
55 Ga0105237_10071889 3300009545 Bacteria 3453
56 Ga0105238_10011771 3300009551 Bacteria 8817
57 Ga0105238_10203994 3300009551 Bacteria 1953
58 Ga0105239_10016439 3300010375 Bacteria 8181
59 Ga0105239_10025626 3300010375 Bacteria 6494
60 Ga0105239_10034721 3300010375 Bacteria 5540
61 Ga0157371_10189356 3300013102 Bacteria 1473
62 Ga0157370_10017253 3300013104 Bacteria 7287
63 Ga0157374_10185886 3300013296 Bacteria 2031
64 Ga0163162_10059068 3300013306 Bacteria 3866
65 Ga0157372_10014448 3300013307 Bacteria 8447
66 Ga0157379_10069312 3300014968 Bacteria 3153
67 Ga0213876_10000328 3300021384 Bacteria 41627
68 Ga0209258_100074 3300025242 Bacteria 271062
69 Ga0209148_1008193 3300025254 Bacteria 2114
70 Ga0209759_1000283 3300025256 Bacteria 70895
71 Ga0209455_1000066 3300025272 Bacteria 316811
72 Ga0207655_1000006 3300025728 Bacteria 861092
73 Ga0207692_10017907 3300025898 Bacteria 3169
74 Ga0207647_10003610 3300025904 Bacteria 11581
75 Ga0207705_10000274 3300025909 Bacteria 49320
76 Ga0207705_10086444 3300025909 Bacteria 2292
77 Ga0207707_10000002 3300025912 Bacteria 1142054
78 Ga0207707_10022801 3300025912 Bacteria 5474
79 Ga0207695_10000004 3300025913 Bacteria 1288665
80 Ga0207695_10002720 3300025913 Bacteria 25817
81 Ga0207695_10020683 3300025913 Bacteria 7531
82 Ga0207695_10020926 3300025913 Bacteria 7476
83 Ga0207695_10225879 3300025913 Bacteria 1778
84 Ga0207693_10000007 3300025915 Bacteria 173735
85 Ga0207660_10000230 3300025917 Bacteria 36015
86 Ga0207660_10002336 3300025917 Bacteria 12489
87 Ga0207657_10001392 3300025919 Bacteria 25775
88 Ga0207657_10012600 3300025919 Bacteria 8335
89 Ga0207657_10021959 3300025919 Bacteria 5992
90 Ga0207652_10000464 3300025921 Bacteria 41551
91 Ga0207652_10002913 3300025921 Bacteria 14314
92 Ga0207652_10024226 3300025921 Bacteria 5034
93 Ga0207694_10000014 3300025924 Bacteria 374435
94 Ga0207694_10026201 3300025924 Bacteria 4433
95 Ga0207694_10026679 3300025924 Bacteria 4396
96 Ga0207694_10029071 3300025924 Bacteria 4215
97 Ga0207687_10045593 3300025927 Bacteria 3031
98 Ga0207700_10028631 3300025928 Bacteria 3920
99 Ga0207664_10000030 3300025929 Bacteria 179903
100 Ga0207690_10000989 3300025932 Bacteria 18215
101 Ga0207690_10005433 3300025932 Bacteria 7508
102 Ga0207690_10032726 3300025932 Bacteria 3338
103 Ga0207706_10016731 3300025933 Bacteria 6620
104 Ga0207686_10128902 3300025934 Bacteria 1732
105 Ga0207665_10007739 3300025939 Bacteria 7093
106 Ga0207711_10000003 3300025941 Bacteria 1042791
107 Ga0207711_10000005 3300025941 Bacteria 822972
108 Ga0207711_10000009 3300025941 Bacteria 580864
109 Ga0207667_10000396 3300025949 Bacteria 58871
110 Ga0207667_10094322 3300025949 Bacteria 3089
111 Ga0207639_10001264 3300026041 Bacteria 17069
112 Ga0207639_10069720 3300026041 Bacteria 2744
113 Ga0207702_10016632 3300026078 Bacteria 6087
114 Ga0207702_10119509 3300026078 Bacteria 2356
115 Ga0207683_10004261 3300026121 Bacteria 12344
116 Ga0268266_10000062 3300028379 Bacteria 253490
117 Ga0265334_10037337 3300028573 Bacteria 1915
118 Ga0265334_10064040 3300028573 Bacteria 1381
119 Ga0307517_10000497 3300028786 Bacteria 67390
120 Ga0265338_10000014 3300028800 Bacteria 378751
121 Ga0265338_10070221 3300028800 Bacteria 3004
122 Ga0265325_10000013 3300031241 Bacteria 142935
123 Ga0265339_10010541 3300031249 Bacteria 5736
124 Ga0265331_10001068 3300031250 Bacteria 21329
125 Ga0265331_10004127 3300031250 Bacteria 9114
126 Ga0265327_10000430 3300031251 Bacteria 76023
127 Ga0265327_10000822 3300031251 Bacteria 46810
128 Ga0307513_10022319 3300031456 Bacteria 7443
129 Ga0265313_10013421 3300031595 Bacteria 4919
130 Ga0265313_10078940 3300031595 Bacteria 1499
131 Ga0265314_10031699 3300031711 Bacteria 3898
132 Ga0265342_10099031 3300031712 Bacteria 1663
133 Ga0307516_10005711 3300031730 Bacteria 14751
134 Ga0316582_0053871 3300036647 Bacteria 2560
135 Ga0373925_0318323 3300037068 Bacteria 1258
136 Ga0436365_0955837 3300039437 Bacteria 92634
137 Ga0436360_0596039 3300039438 Bacteria 1464
138 Ga0451807_0659944 3300041486 Unclassified 2146
139 Ga0495591_013033 3300046458 Bacteria 3063
140 Ga0495650_0020482 3300046471 Bacteria 3223
141 Ga0495580_0002881 3300046472 Bacteria 14812
142 Ga0495580_0125865 3300046472 Bacteria 1778
143 Ga0495605_0000016 3300046474 Bacteria 289508
144 Ga0495594_0000132 3300046499 Bacteria 35426
145 Ga0495583_0000041 3300046506 Bacteria 234707
146 Ga0495610_0018538 3300046512 Bacteria 3926
147 Ga0495620_0000015 3300046515 Bacteria 154625
148 Ga0495631_0005391 3300046518 Bacteria 6696
149 Ga0495648_0016999 3300046524 Bacteria 5220
150 Ga0495654_0006583 3300046530 Bacteria 6578
151 Ga0495609_0000015 3300046538 Bacteria 322474
152 Ga0495597_0004953 3300046542 Bacteria 7159
153 Ga0495633_0000060 3300046558 Bacteria 144561
154 Ga0495668_0118904 3300046616 Bacteria 1445
155 Ga0495611_0000482 3300046648 Bacteria 23759
156 Ga0495611_0013997 3300046648 Bacteria 3423
157 Ga0495661_0000046 3300046665 Bacteria 148306
158 Ga0495669_0094851 3300046684 Bacteria 1381
159 Ga0495670_0021302 3300046691 Bacteria 3196
160 Ga0495671_0018280 3300046692 Bacteria 3721
161 Ga0495589_0016711 3300046794 Bacteria 3768
162 Ga0495660_0000315 3300046810 Bacteria 43759
163 Ga0495660_0060677 3300046810 Bacteria 2030
164 Ga0495674_0146527 3300047319 Bacteria 1982
165 Ga0495672_0000199 3300047320 Bacteria 85658
166 Ga0495683_0000027 3300047323 Bacteria 153730
167 Ga0495679_000712 3300047446 Bacteria 21525
168 Ga0495673_0003501 3300047469 Bacteria 10329
169 Ga0496101_0318245 3300048904 Bacteria 1220
170 Ga0496103_0191586 3300048906 Bacteria 1315
171 Ga0496110_0084643 3300048913 Bacteria 2830
172 Ga0496112_0027812 3300048915 Bacteria 5455
173 Ga0496114_0033272 3300048917 Bacteria 4246
174 Ga0496115_0285847 3300048918 Bacteria 1353
175 Ga0496122_0062668 3300048925 Bacteria 2720
176 Ga0496126_0000338 3300048929 Bacteria 98321
177 Ga0495678_000039 3300049459 Bacteria 191665
178 Ga0501031_0061159 3300049568 Bacteria 2454
179 Ga0501032_0028734 3300049569 Bacteria 3819
180 Ga0501032_0209353 3300049569 Bacteria 1271
181 Ga0501034_0045987 3300049571 Bacteria 4410
182 Ga0501034_0117370 3300049571 Bacteria 2648
183 Ga0501034_0251804 3300049571 Bacteria 1711
184 Ga0501036_0119783 3300049572 Bacteria 2223
185 Ga0501038_0027362 3300049574 Bacteria 5073
186 Ga0501043_0072758 3300049579 Bacteria 2700
187 Ga0501047_0012682 3300049581 Bacteria 7984
188 Ga0501047_0095892 3300049581 Bacteria 2845
189 Ga0501067_0004835 3300049583 Bacteria 7471
190 Ga0501070_0000020 3300049586 Bacteria 169025
191 Ga0501070_0011543 3300049586 Bacteria 7457
192 Ga0501070_0043396 3300049586 Bacteria 3742
193 Ga0501070_0271860 3300049586 Bacteria 1384
194 Ga0501072_0142090 3300049588 Bacteria 1914
195 Ga0501072_0268425 3300049588 Bacteria 1358
196 Ga0501073_0008105 3300049589 Bacteria 7794
197 Ga0501079_0048850 3300049741 Bacteria 3265
198 Ga0501080_0002141 3300049742 Bacteria 17162
199 Ga0501080_0041200 3300049742 Bacteria 4305
200 Ga0501035_0000349 3300049822 Bacteria 53020
201 Ga0501035_0024822 3300049822 Bacteria 5496
202 Ga0501035_0025770 3300049822 Bacteria 5390
203 Ga0501035_0162574 3300049822 Bacteria 1932
204 Ga0501044_0003843 3300049823 Bacteria 16853
205 Ga0501044_0027426 3300049823 Bacteria 6019
206 Ga0501044_0038577 3300049823 Bacteria 4988
207 Ga0501044_0083359 3300049823 Bacteria 3233
208 Ga0501044_0237353 3300049823 Bacteria 1768
209 Ga0500647_0003888 3300053091 Bacteria 5905
210 Ga0500572_001534 3300053111 Bacteria 6188
211 Ga0500597_001264 3300053120 Bacteria 6270
212 Ga0500624_000212 3300053157 Bacteria 21975
213 Ga0500637_0000205 3300053178 Bacteria 21975
214 Ga0501084_0000721 3300054114 Bacteria 25202
215 Ga0501084_0050692 3300054114 Bacteria 3473
216 Ga0501084_0069190 3300054114 Bacteria 2955

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046616 Ga0495668_0118904 Ga0495668_0118904_348_1409 288
2 3300009093 Ga0105240_10030567 Ga0105240_100305672 294
3 3300046472 Ga0495580_0002881 Ga0495580_0002881_5061_6134 298
4 3300013306 Ga0163162_10059068 Ga0163162_100590682 299
5 3300025898 Ga0207692_10017907 Ga0207692_100179072 299
6 3300037068 Ga0373925_0318323 Ga0373925_0318323_22_1098 299
7 3300046472 Ga0495580_0125865 Ga0495580_0125865_488_1564 299
8 3300047319 Ga0495674_0146527 Ga0495674_0146527_803_1879 299
9 3300048904 Ga0496101_0318245 Ga0496101_0318245_19_1095 299
10 3300048906 Ga0496103_0191586 Ga0496103_0191586_179_1255 299
11 3300048913 Ga0496110_0084643 Ga0496110_0084643_603_1679 299
12 3300005842 Ga0068858_100008461 Ga0068858_1000084613 301
13 3300026121 Ga0207683_10004261 Ga0207683_100042617 301
14 3300005436 Ga0070713_100002353 Ga0070713_1000023538 302
15 3300005440 Ga0070705_100045360 Ga0070705_1000453602 302
16 3300005456 Ga0070678_100027079 Ga0070678_1000270792 302
17 3300005458 Ga0070681_10064038 Ga0070681_100640383 302
18 3300005530 Ga0070679_100013401 Ga0070679_1000134018 302
19 3300005547 Ga0070693_100097433 Ga0070693_1000974332 302
20 3300005548 Ga0070665_100050476 Ga0070665_1000504761 302
21 3300005843 Ga0068860_100053940 Ga0068860_1000539403 302
22 3300006173 Ga0070716_100006821 Ga0070716_1000068211 302
23 3300006175 Ga0070712_100007898 Ga0070712_1000078982 302
24 3300009098 Ga0105245_10002609 Ga0105245_100026098 302
25 3300009101 Ga0105247_10010271 Ga0105247_100102712 302
26 3300009176 Ga0105242_10003685 Ga0105242_100036854 302
27 3300009551 Ga0105238_10011771 Ga0105238_100117714 302
28 3300014968 Ga0157379_10069312 Ga0157379_100693122 302
29 3300025913 Ga0207695_10002720 Ga0207695_100027206 302
30 3300025915 Ga0207693_10000007 Ga0207693_10000007153 302
31 3300025921 Ga0207652_10024226 Ga0207652_100242266 302
32 3300025927 Ga0207687_10045593 Ga0207687_100455933 302
33 3300025928 Ga0207700_10028631 Ga0207700_100286312 302
34 3300025934 Ga0207686_10128902 Ga0207686_101289022 302
35 3300025939 Ga0207665_10007739 Ga0207665_100077394 302
36 3300026078 Ga0207702_10119509 Ga0207702_101195092 302
37 3300048915 Ga0496112_0027812 Ga0496112_0027812_2068_3234 302
38 3300048917 Ga0496114_0033272 Ga0496114_0033272_743_1909 302
39 3300048918 Ga0496115_0285847 Ga0496115_0285847_62_1228 302
40 3300049588 Ga0501072_0142090 Ga0501072_0142090_380_1528 304
41 3300049571 Ga0501034_0117370 Ga0501034_0117370_415_1563 305
42 3300005327 Ga0070658_10003709 Ga0070658_100037097 307
43 3300005336 Ga0070680_100015857 Ga0070680_1000158574 307
44 3300005339 Ga0070660_100005920 Ga0070660_1000059204 307
45 3300005341 Ga0070691_10039718 Ga0070691_100397183 307
46 3300005458 Ga0070681_10089826 Ga0070681_100898264 307
47 3300005530 Ga0070679_100029137 Ga0070679_1000291372 307
48 3300005539 Ga0068853_100045713 Ga0068853_1000457132 307
49 3300005563 Ga0068855_100022040 Ga0068855_1000220402 307
50 3300013102 Ga0157371_10189356 Ga0157371_101893562 307
51 3300013104 Ga0157370_10017253 Ga0157370_100172532 307
52 3300025909 Ga0207705_10000274 Ga0207705_1000027436 307
53 3300025912 Ga0207707_10022801 Ga0207707_100228014 307
54 3300025917 Ga0207660_10002336 Ga0207660_100023364 307
55 3300025919 Ga0207657_10001392 Ga0207657_1000139210 307
56 3300025921 Ga0207652_10002913 Ga0207652_1000291311 307
57 3300025924 Ga0207694_10029071 Ga0207694_100290712 307
58 3300025932 Ga0207690_10032726 Ga0207690_100327261 307
59 3300025949 Ga0207667_10094322 Ga0207667_100943222 307
60 3300026041 Ga0207639_10069720 Ga0207639_100697202 307
61 3300028573 Ga0265334_10037337 Ga0265334_100373372 308
62 3300049581 Ga0501047_0012682 Ga0501047_0012682_4693_5778 309
63 3300049822 Ga0501035_0024822 Ga0501035_0024822_1761_2846 309
64 3300049823 Ga0501044_0038577 Ga0501044_0038577_2394_3479 309
65 3300009011 Ga0105251_10005969 Ga0105251_100059692 310
66 3300046810 Ga0495660_0000315 Ga0495660_0000315_31742_32824 312
67 3300005367 Ga0070667_100005652 Ga0070667_1000056528 313
68 3300025919 Ga0207657_10021959 Ga0207657_100219592 313
69 3300005338 Ga0068868_100034799 Ga0068868_1000347992 314
70 3300005355 Ga0070671_100065181 Ga0070671_1000651812 314
71 3300031251 Ga0265327_10000822 Ga0265327_1000082222 314
72 3300036647 Ga0316582_0053871 Ga0316582_0053871_93_1337 314
73 3300046648 Ga0495611_0013997 Ga0495611_0013997_1970_3166 314
74 3300049571 Ga0501034_0045987 Ga0501034_0045987_2168_3343 314
75 3300009011 Ga0105251_10006146 Ga0105251_100061465 316
76 3300025728 Ga0207655_1000006 Ga0207655_1000006630 316
77 3300046684 Ga0495669_0094851 Ga0495669_0094851_19_1188 316
78 3300005355 Ga0070671_100005924 Ga0070671_1000059242 317
79 3300046458 Ga0495591_013033 Ga0495591_013033_858_2021 317
80 3300046471 Ga0495650_0020482 Ga0495650_0020482_294_1457 317
81 3300046474 Ga0495605_0000016 Ga0495605_0000016_131466_132629 317
82 3300046499 Ga0495594_0000132 Ga0495594_0000132_14756_15919 317
83 3300046506 Ga0495583_0000041 Ga0495583_0000041_120025_121188 317
84 3300046512 Ga0495610_0018538 Ga0495610_0018538_2249_3412 317
85 3300046515 Ga0495620_0000015 Ga0495620_0000015_119881_121044 317
86 3300046518 Ga0495631_0005391 Ga0495631_0005391_5455_6618 317
87 3300046524 Ga0495648_0016999 Ga0495648_0016999_3499_4662 317
88 3300046530 Ga0495654_0006583 Ga0495654_0006583_514_1677 317
89 3300046538 Ga0495609_0000015 Ga0495609_0000015_201188_202351 317
90 3300046542 Ga0495597_0004953 Ga0495597_0004953_357_1520 317
91 3300046558 Ga0495633_0000060 Ga0495633_0000060_33329_34492 317
92 3300046648 Ga0495611_0000482 Ga0495611_0000482_19623_20786 317
93 3300046665 Ga0495661_0000046 Ga0495661_0000046_15576_16739 317
94 3300046691 Ga0495670_0021302 Ga0495670_0021302_373_1536 317
95 3300046692 Ga0495671_0018280 Ga0495671_0018280_1701_2864 317
96 3300046794 Ga0495589_0016711 Ga0495589_0016711_2088_3251 317
97 3300046810 Ga0495660_0060677 Ga0495660_0060677_585_1748 317
98 3300047323 Ga0495683_0000027 Ga0495683_0000027_33718_34881 317
99 3300047446 Ga0495679_000712 Ga0495679_000712_9168_10331 317
100 3300047469 Ga0495673_0003501 Ga0495673_0003501_1423_2586 317
101 3300048925 Ga0496122_0062668 Ga0496122_0062668_370_1533 317
102 3300049459 Ga0495678_000039 Ga0495678_000039_67045_68208 317
103 3300005457 Ga0070662_100034868 Ga0070662_1000348682 318
104 3300025913 Ga0207695_10225879 Ga0207695_102258791 318
105 3300025933 Ga0207706_10016731 Ga0207706_100167314 318
106 3300048929 Ga0496126_0000338 Ga0496126_0000338_77028_78128 318
107 3300005345 Ga0070692_10066270 Ga0070692_100662701 319
108 3300005435 Ga0070714_100000055 Ga0070714_10000005537 319
109 3300005614 Ga0068856_100025535 Ga0068856_1000255352 319
110 3300009148 Ga0105243_10015328 Ga0105243_100153282 319
111 3300009545 Ga0105237_10071889 Ga0105237_100718892 319
112 3300009551 Ga0105238_10203994 Ga0105238_102039942 319
113 3300010375 Ga0105239_10016439 Ga0105239_100164392 319
114 3300013307 Ga0157372_10014448 Ga0157372_100144482 319
115 3300021384 Ga0213876_10000328 Ga0213876_1000032812 319
116 3300025904 Ga0207647_10003610 Ga0207647_100036108 319
117 3300025924 Ga0207694_10026201 Ga0207694_100262013 319
118 3300025929 Ga0207664_10000030 Ga0207664_1000003061 319
119 3300026078 Ga0207702_10016632 Ga0207702_100166323 319
120 3300031250 Ga0265331_10001068 Ga0265331_100010684 319
121 3300031251 Ga0265327_10000430 Ga0265327_1000043027 319
122 3300031595 Ga0265313_10078940 Ga0265313_100789402 319
123 3300039437 Ga0436365_0955837 Ga0436365_0955837_2345_3397 319
124 3300025909 Ga0207705_10086444 Ga0207705_100864442 320
125 3300053111 Ga0500572_001534 Ga0500572_001534_1161_2351 320
126 3300009011 Ga0105251_10010806 Ga0105251_100108062 321
127 3300025932 Ga0207690_10005433 Ga0207690_100054335 321
128 3300047320 Ga0495672_0000199 Ga0495672_0000199_3328_4482 321
129 3300053091 Ga0500647_0003888 Ga0500647_0003888_1140_2339 321
130 3300005339 Ga0070660_100089961 Ga0070660_1000899611 323
131 3300005548 Ga0070665_100000397 Ga0070665_10000039737 323
132 3300009093 Ga0105240_10011242 Ga0105240_100112425 323
133 3300009093 Ga0105240_10149086 Ga0105240_101490862 323
134 3300025913 Ga0207695_10020683 Ga0207695_100206836 323
135 3300025924 Ga0207694_10026679 Ga0207694_100266792 323
136 3300028379 Ga0268266_10000062 Ga0268266_10000062110 323
137 3300039438 Ga0436360_0596039 Ga0436360_0596039_103_1260 323
138 3300009036 Ga0105244_10014851 Ga0105244_100148512 324
139 3300028800 Ga0265338_10070221 Ga0265338_100702212 324
140 3300049586 Ga0501070_0043396 Ga0501070_0043396_2185_3291 324
141 3300054114 Ga0501084_0069190 Ga0501084_0069190_1347_2453 324
142 3300005366 Ga0070659_100004726 Ga0070659_1000047262 325
143 3300025919 Ga0207657_10012600 Ga0207657_100126003 325
144 3300025932 Ga0207690_10000989 Ga0207690_100009898 325
145 3300049571 Ga0501034_0251804 Ga0501034_0251804_97_1218 325
146 3300049581 Ga0501047_0095892 Ga0501047_0095892_456_1562 325
147 3300049589 Ga0501073_0008105 Ga0501073_0008105_5120_6226 325
148 3300049822 Ga0501035_0162574 Ga0501035_0162574_149_1270 326
149 3300049586 Ga0501070_0271860 Ga0501070_0271860_37_1158 327
150 3300049823 Ga0501044_0237353 Ga0501044_0237353_219_1340 327
151 iso_pu_bacteria 2921643360 2921652463 327
152 3300005539 Ga0068853_100005165 Ga0068853_1000051653 330
153 3300026041 Ga0207639_10001264 Ga0207639_100012646 330
154 3300028573 Ga0265334_10064040 Ga0265334_100640401 330
155 3300028800 Ga0265338_10000014 Ga0265338_1000001495 330
156 3300031241 Ga0265325_10000013 Ga0265325_1000001324 330
157 3300031249 Ga0265339_10010541 Ga0265339_100105415 330
158 3300031250 Ga0265331_10004127 Ga0265331_100041273 330
159 3300031595 Ga0265313_10013421 Ga0265313_100134212 330
160 3300049569 Ga0501032_0028734 Ga0501032_0028734_1534_2637 330
161 3300049579 Ga0501043_0072758 Ga0501043_0072758_1210_2313 330
162 3300049583 Ga0501067_0004835 Ga0501067_0004835_2416_3519 330
163 3300049586 Ga0501070_0011543 Ga0501070_0011543_772_1875 330
164 3300049588 Ga0501072_0268425 Ga0501072_0268425_64_1167 330
165 3300049741 Ga0501079_0048850 Ga0501079_0048850_1154_2257 330
166 3300049742 Ga0501080_0041200 Ga0501080_0041200_1031_2131 330
167 3300049822 Ga0501035_0025770 Ga0501035_0025770_1636_2739 330
168 3300049823 Ga0501044_0027426 Ga0501044_0027426_3307_4410 330
169 3300054114 Ga0501084_0050692 Ga0501084_0050692_1881_2984 330
170 3300028786 Ga0307517_10000497 Ga0307517_1000049710 331
171 3300031456 Ga0307513_10022319 Ga0307513_100223192 331
172 3300031711 Ga0265314_10031699 Ga0265314_100316992 331
173 3300005336 Ga0070680_100000131 Ga0070680_10000013137 332
174 3300005458 Ga0070681_10000021 Ga0070681_10000021113 332
175 3300005530 Ga0070679_100000848 Ga0070679_10000084811 332
176 3300005563 Ga0068855_100000006 Ga0068855_100000006198 332
177 3300009093 Ga0105240_10000080 Ga0105240_1000008097 332
178 3300009093 Ga0105240_10036753 Ga0105240_100367533 332
179 3300009174 Ga0105241_10281737 Ga0105241_102817371 332
180 3300009177 Ga0105248_10000015 Ga0105248_10000015221 332
181 3300010375 Ga0105239_10025626 Ga0105239_100256265 332
182 3300010375 Ga0105239_10034721 Ga0105239_100347212 332
183 3300025912 Ga0207707_10000002 Ga0207707_100000021160 332
184 3300025913 Ga0207695_10000004 Ga0207695_10000004677 332
185 3300025913 Ga0207695_10020926 Ga0207695_100209263 332
186 3300025917 Ga0207660_10000230 Ga0207660_100002304 332
187 3300025921 Ga0207652_10000464 Ga0207652_1000046425 332
188 3300025924 Ga0207694_10000014 Ga0207694_10000014268 332
189 3300025941 Ga0207711_10000003 Ga0207711_10000003907 332
190 3300025941 Ga0207711_10000005 Ga0207711_10000005226 332
191 3300025941 Ga0207711_10000009 Ga0207711_10000009429 332
192 3300025949 Ga0207667_10000396 Ga0207667_1000039638 332
193 3300031730 Ga0307516_10005711 Ga0307516_1000571111 332
194 3300041486 Ga0451807_0659944 Ga0451807_0659944_833_1927 332
195 3300054114 Ga0501084_0000721 Ga0501084_0000721_1251_2351 332
196 3300031712 Ga0265342_10099031 Ga0265342_100990312 333
197 3300049569 Ga0501032_0209353 Ga0501032_0209353_73_1185 333
198 3300003320 rootH2_10009015 rootH2_100090152 334
199 3300049568 Ga0501031_0061159 Ga0501031_0061159_468_1589 334
200 3300049572 Ga0501036_0119783 Ga0501036_0119783_443_1681 334
201 3300049574 Ga0501038_0027362 Ga0501038_0027362_611_1849 334
202 3300049586 Ga0501070_0000020 Ga0501070_0000020_124274_125512 334
203 3300049742 Ga0501080_0002141 Ga0501080_0002141_11225_12463 334
204 3300049822 Ga0501035_0000349 Ga0501035_0000349_31031_32269 334
205 3300049823 Ga0501044_0003843 Ga0501044_0003843_6271_7509 334
206 3300049823 Ga0501044_0083359 Ga0501044_0083359_924_2045 334
207 3300053120 Ga0500597_001264 Ga0500597_001264_2583_3701 335
208 3300053157 Ga0500624_000212 Ga0500624_000212_11484_12602 335
209 3300053178 Ga0500637_0000205 Ga0500637_0000205_9374_10492 335
210 3300013296 Ga0157374_10185886 Ga0157374_101858862 336
211 iso_pu_bacteria 3000865235 3000866475 339
212 iso_pu_bacteria 3007419365 3007423400 344
213 iso_pu_bacteria 2939611941 2939613575 349
214 3300002705 JGI25156J39149_1007903 JGI25156J39149_10079032 355
215 3300003761 Ga0055535_1000052 Ga0055535_100005274 355
216 3300003763 Ga0055529_1000365 Ga0055529_10003653 355
217 3300025242 Ga0209258_100074 Ga0209258_100074182 355
218 3300025254 Ga0209148_1008193 Ga0209148_10081932 355
219 3300025256 Ga0209759_1000283 Ga0209759_100028344 355
220 3300025272 Ga0209455_1000066 Ga0209455_1000066222 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13437

HlyD_3

HlyD family secretion protein

197

311

0.95

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

100

149

0.87

PF00529

CusB_dom_1

Cation efflux system protein CusB domain 1

36

382

0.79

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

86

314

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qsh-assembly1.cif.gz_D crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8669 57 170
4qsh-assembly1.cif.gz_B crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8657 57 170
4qsh-assembly1.cif.gz_C crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8652 57 170
4qsh-assembly1.cif.gz_A crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8652 57 170
2ejg-assembly1.cif.gz_C crystal structure of the biotin protein ligase (mutation r48a) and biotin carboxyl carrier protein complex from pyrococcus horikoshii ot3 0.8533 56 169
ID Description Score Start End Superfamily
1vf7H02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9924 54 169 2.40.50.100
1vf7H02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9514 54 169 2.40.50.100
2v4dB01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9353 266 337 2.40.420.20
af_P77239_320_407_2.40.420.20 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9173 268 327 2.40.420.20
4l8jA03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9167 54 171 2.40.50.100
ID Description Score Start End GO Terms
AF-A0A2X2YF73-F1-model_v4 Acriflavine resistance protein E 0.9433 266 331 GO:0005886
GO:0046677
GO:0055085
AF-A0A220RKL4-F1-model_v4 deleted 0.9125 266 347
AF-A0A2D8HW48-F1-model_v4 Efflux transporter periplasmic adaptor subunit 0.827 115 345 GO:0005886
GO:0015721
GO:0022857
GO:0046677
AF-A0A2D8HW48-F1-model_v4 Efflux transporter periplasmic adaptor subunit 0.8171 115 345 GO:0005886
GO:0015721
GO:0022857
GO:0046677
AF-A0A6J5JVC0-F1-model_v4 Hemolysin D 0.8142 141 355 GO:0005886
GO:0022857
GO:0046677

Feature Viewer

pLDDT pTM Quality
79.36 0.64 Medium
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Predicted Structure (AlphaFold2)

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