F330524

General Info

Members Datasets Scaffolds Average Seq Length
218 100 88 308

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221676|2644425821
Length 335
Sequence VERALLSPSIQNEVREKMETTQPLKSMALAKKKPGINRYVRDFIMNKYLYLMMVPVLVYYIIFHYAPMYGALIAFKEYSPMKGILGSEWVGFKHFQDFFSSFYFWRILKNTLVISLYSLVFEFPAPIILALLINEVRSKMFKRVAQTITYMPYFISLVVICGIITDFTNADGVINKILMTFGYDGQTMLQKPDLFRPIYILSEIWQRIGWESIIYIAALMGIDTEQYEAARMDGATRWKQIIHITLPGIMPTIAIMFILRMGNLLNVGFEKIILLYNPVTYETADVISSFVYRKGLLEFGWSYSSAVGLFNSVINLILLVTANYISRKVNESSLW

Samples

Sample ID Description Type Environment
1 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
2 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
3 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
4 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
5 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
6 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
7 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
8 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
9 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
10 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
11 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
12 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
13 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
14 2671180694 Paenibacillus sp. A3 Isolate Unclassified
15 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
16 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
17 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
18 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
19 2818991441 Niallia circulans 3243 Isolate Rhizosphere
20 2818991459 Paenibacillus sp. 597 Isolate Unclassified
21 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
22 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
23 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
24 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
25 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
26 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
27 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
28 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
29 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
30 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
31 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
32 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
33 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
34 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
35 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
36 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
37 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
38 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
39 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
40 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
41 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
42 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
43 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
44 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
45 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
46 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
47 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
48 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
49 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
50 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
51 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
52 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
53 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
54 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
55 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
56 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
57 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
58 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
68 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
69 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
70 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
76 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
77 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
78 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
81 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
82 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
83 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
84 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
85 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
86 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
87 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
88 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
89 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
90 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
91 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
92 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
93 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
96 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
97 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
98 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
99 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
100 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 40.37
Metatranscriptomes 0
Isolates 59.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.72
Nodule 4.59
Rhizoplane 0.46
Rhizosphere 36.7
Stem 0
Stem Tuber 0
Unclassified 49.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055538_1000166 3300003751 Bacteria 42809
2 Ga0055538_1004233 3300003751 Bacteria 1661
3 Ga0055541_1001150 3300003841 Bacteria 5927
4 Ga0055541_1004506 3300003841 Bacteria 2522
5 Ga0055541_1006081 3300003841 Bacteria 2073
6 Ga0055541_1006226 3300003841 Bacteria 2036
7 Ga0105251_10005324 3300009011 Bacteria 8456
8 Ga0105244_10025091 3300009036 Bacteria 3245
9 Ga0105246_10004382 3300011119 Bacteria 8589
10 Ga0209784_100037 3300025224 Bacteria 259956
11 Ga0209784_100171 3300025224 Bacteria 55743
12 Ga0209784_100207 3300025224 Bacteria 42066
13 Ga0209784_101536 3300025224 Bacteria 2938
14 Ga0209566_100374 3300025225 Bacteria 36983
15 Ga0209566_100401 3300025225 Bacteria 34469
16 Ga0209566_100426 3300025225 Bacteria 32216
17 Ga0209566_100565 3300025225 Bacteria 24271
18 Ga0209566_101404 3300025225 Bacteria 7330
19 Ga0209147_102687 3300025229 Bacteria 4103
20 Ga0209437_100644 3300025233 Bacteria 20406
21 Ga0209437_100706 3300025233 Bacteria 17366
22 Ga0209025_1004668 3300025294 Bacteria 11715
23 Ga0207713_1022422 3300025735 Bacteria 2997
24 Ga0209371_1029761 3300027312 Bacteria 1203
25 Ga0265322_10001094 3300028654 Bacteria 9358
26 Ga0268256_1033858 3300030500 Bacteria 1203
27 Ga0265332_10001296 3300031238 Bacteria 14293
28 Ga0265329_10007051 3300031242 Unclassified 4385
29 Ga0265316_10000112 3300031344 Bacteria 87681
30 Ga0265342_10001535 3300031712 Bacteria 21359
31 Ga0307416_100123900 3300032002 Bacteria 2311
32 Ga0395899_0004040 3300037312 Bacteria 11572
33 Ga0395899_0020310 3300037312 Bacteria 5039
34 Ga0395899_0020888 3300037312 Bacteria 4965
35 Ga0395899_0035478 3300037312 Bacteria 3743
36 Ga0395899_0056801 3300037312 Bacteria 2891
37 Ga0395899_0097822 3300037312 Bacteria 2121
38 Ga0400483_171961 3300039062 Bacteria 1635
39 Ga0439449_0011107 3300042007 Bacteria 3394
40 Ga0439462_0001698 3300042015 Bacteria 4972
41 Ga0466969_0015328 3300044656 Bacteria 4018
42 Ga0466959_0088062 3300045049 Bacteria 2232
43 Ga0495590_0011612 3300046457 Bacteria 3290
44 Ga0495590_0043398 3300046457 Bacteria 1568
45 Ga0495649_0143730 3300046694 Bacteria 1255
46 Ga0495660_0092053 3300046810 Bacteria 1574
47 Ga0495626_0024990 3300048091 Bacteria 2924
48 Ga0495626_0049896 3300048091 Bacteria 1936
49 Ga0496116_0002112 3300048919 Bacteria 21193
50 Ga0496116_0005646 3300048919 Bacteria 11516
51 Ga0496116_0048030 3300048919 Bacteria 2868
52 Ga0496116_0055941 3300048919 Bacteria 2589
53 Ga0496116_0069306 3300048919 Bacteria 2243
54 Ga0496116_0117642 3300048919 Bacteria 1546
55 Ga0496117_0000384 3300048920 Bacteria 75876
56 Ga0496118_0014829 3300048921 Bacteria 7267
57 Ga0496118_0250256 3300048921 Bacteria 1007
58 Ga0496119_0001960 3300048922 Bacteria 23400
59 Ga0496119_0014692 3300048922 Bacteria 6100
60 Ga0496119_0016445 3300048922 Bacteria 5630
61 Ga0496119_0110274 3300048922 Bacteria 1528
62 Ga0496120_0000037 3300048923 Bacteria 204517
63 Ga0496120_0000436 3300048923 Bacteria 66033
64 Ga0496120_0037819 3300048923 Bacteria 2860
65 Ga0496121_0029112 3300048924 Bacteria 5119
66 Ga0496121_0131527 3300048924 Bacteria 1872
67 Ga0496121_0155002 3300048924 Bacteria 1681
68 Ga0496122_0000139 3300048925 Bacteria 169425
69 Ga0496122_0001053 3300048925 Bacteria 48216
70 Ga0496122_0021168 3300048925 Bacteria 5834
71 Ga0496122_0034670 3300048925 Bacteria 4125
72 Ga0496122_0040589 3300048925 Bacteria 3695
73 Ga0496122_0097044 3300048925 Bacteria 1985
74 Ga0496122_0134497 3300048925 Bacteria 1562
75 Ga0496123_0000864 3300048926 Bacteria 48216
76 Ga0496123_0020452 3300048926 Bacteria 5177
77 Ga0496123_0129828 3300048926 Bacteria 1399
78 Ga0496123_0150511 3300048926 Bacteria 1257
79 Ga0496124_0000062 3300048927 Bacteria 232676
80 Ga0496124_0035772 3300048927 Bacteria 4341
81 Ga0496124_0072214 3300048927 Bacteria 2858
82 Ga0496125_0000084 3300048928 Bacteria 223170
83 Ga0496125_0001792 3300048928 Bacteria 29679
84 Ga0496125_0220420 3300048928 Bacteria 1223
85 Ga0496125_0308307 3300048928 Bacteria 966
86 Ga0496126_0000413 3300048929 Bacteria 86439
87 Ga0496126_0000953 3300048929 Bacteria 49576
88 Ga0496126_0017474 3300048929 Bacteria 7144

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025224 Ga0209784_101536 Ga0209784_1015362 268
2 3300046457 Ga0495590_0011612 Ga0495590_0011612_865_1674 268
3 3300046694 Ga0495649_0143730 Ga0495649_0143730_170_979 268
4 3300048921 Ga0496118_0014829 Ga0496118_0014829_1794_2603 268
5 3300048922 Ga0496119_0016445 Ga0496119_0016445_4689_5498 268
6 3300048924 Ga0496121_0029112 Ga0496121_0029112_4073_4882 268
7 3300048924 Ga0496121_0155002 Ga0496121_0155002_238_1047 268
8 3300048925 Ga0496122_0021168 Ga0496122_0021168_1891_2700 268
9 3300048925 Ga0496122_0134497 Ga0496122_0134497_325_1134 268
10 3300048926 Ga0496123_0150511 Ga0496123_0150511_388_1197 268
11 3300048927 Ga0496124_0035772 Ga0496124_0035772_2702_3511 268
12 3300048928 Ga0496125_0001792 Ga0496125_0001792_22274_23083 268
13 3300048928 Ga0496125_0308307 Ga0496125_0308307_11_820 268
14 3300048929 Ga0496126_0017474 Ga0496126_0017474_4533_5342 268
15 3300027312 Ga0209371_1029761 Ga0209371_10297611 284
16 3300030500 Ga0268256_1033858 Ga0268256_10338581 284
17 3300039062 Ga0400483_171961 Ga0400483_171961_581_1441 284
18 3300048921 Ga0496118_0250256 Ga0496118_0250256_128_994 284
19 3300048925 Ga0496122_0000139 Ga0496122_0000139_154460_155437 287
20 3300048926 Ga0496123_0020452 Ga0496123_0020452_2384_3361 287
21 3300048929 Ga0496126_0000413 Ga0496126_0000413_71474_72451 287
22 iso_pu_bacteria 2889276214 2889280012 289
23 iso_pu_bacteria 2931384279 2931384292 291
24 iso_pu_bacteria 2524023129 2524188285 292
25 iso_pu_bacteria 2885526491 2885531474 292
26 iso_pu_bacteria 2888578766 2888580157 292
27 iso_pu_bacteria 2889049205 2889053278 292
28 iso_pu_bacteria 2904162308 2904164009 292
29 3300048919 Ga0496116_0055941 Ga0496116_0055941_453_1334 293
30 iso_pu_bacteria 2671180694 2673817791 293
31 iso_pu_bacteria 2980182181 2980186427 294
32 3300003841 Ga0055541_1001150 Ga0055541_10011504 296
33 3300025225 Ga0209566_100565 Ga0209566_1005659 296
34 3300032002 Ga0307416_100123900 Ga0307416_1001239002 296
35 3300042007 Ga0439449_0011107 Ga0439449_0011107_1556_2449 296
36 3300042015 Ga0439462_0001698 Ga0439462_0001698_1724_2617 296
37 3300044656 Ga0466969_0015328 Ga0466969_0015328_426_1319 296
38 3300045049 Ga0466959_0088062 Ga0466959_0088062_836_1729 296
39 iso_pu_bacteria 2512564039 2512731817 296
40 iso_pu_bacteria 2512564039 2512731870 296
41 iso_pu_bacteria 2928510474 2928512971 296
42 iso_pu_bacteria 2980182181 2980183419 296
43 3300025233 Ga0209437_100644 Ga0209437_10064413 297
44 3300046810 Ga0495660_0092053 Ga0495660_0092053_453_1421 297
45 3300048091 Ga0495626_0024990 Ga0495626_0024990_906_1847 297
46 3300048919 Ga0496116_0002112 Ga0496116_0002112_1666_2613 297
47 3300048922 Ga0496119_0014692 Ga0496119_0014692_2274_3221 297
48 3300048923 Ga0496120_0037819 Ga0496120_0037819_251_1198 297
49 3300048924 Ga0496121_0131527 Ga0496121_0131527_100_1068 297
50 3300048925 Ga0496122_0040589 Ga0496122_0040589_902_1849 297
51 3300048927 Ga0496124_0000062 Ga0496124_0000062_85612_86559 297
52 3300048929 Ga0496126_0000953 Ga0496126_0000953_4983_5930 297
53 iso_pu_bacteria 2548877040 2550903740 297
54 iso_pu_bacteria 2571042143 2571527010 297
55 iso_pu_bacteria 2571042588 2573037066 297
56 iso_pu_bacteria 2576861424 2578338565 297
57 iso_pu_bacteria 2579778775 2580933054 297
58 iso_pu_bacteria 2600255286 2601637636 297
59 iso_pu_bacteria 2619619294 2621277121 297
60 iso_pu_bacteria 2643221676 2644424102 297
61 iso_pu_bacteria 2728368933 2728530271 297
62 iso_pu_bacteria 2818991459 2819673939 297
63 iso_pu_bacteria 2821111986 2821112572 297
64 iso_pu_bacteria 2857453340 2857456045 297
65 iso_pu_bacteria 2881636855 2881640012 297
66 iso_pu_bacteria 2904595352 2904597980 297
67 iso_pu_bacteria 2904755435 2904761360 297
68 iso_pu_bacteria 2919425241 2919429011 297
69 iso_pu_bacteria 2938649242 2938652598 297
70 iso_pu_bacteria 2938649242 2938653637 297
71 iso_pu_bacteria 2968558590 2968561340 297
72 iso_pu_bacteria 2968558590 2968564346 297
73 iso_pu_bacteria 2971410472 2971413716 297
74 iso_pu_bacteria 2971511577 2971513016 297
75 iso_pu_bacteria 2980176882 2980177927 297
76 iso_pu_bacteria 2980182181 2980183598 297
77 iso_pu_bacteria 2980182181 2980188636 297
78 iso_pu_bacteria 2988225383 2988228435 297
79 iso_pu_bacteria 2996632988 2996636089 297
80 iso_pu_bacteria 2996632988 2996636801 297
81 iso_pu_bacteria 648028048 648169396 297
82 iso_pu_bacteria 8054465665 8054466967 297
83 iso_pu_bacteria 8054795415 8054797575 297
84 iso_pu_bacteria 8054795415 8054802742 297
85 iso_pu_bacteria 2818991441 2819570176 298
86 iso_pu_bacteria 2524023129 2524187726 299
87 3300003751 Ga0055538_1004233 Ga0055538_10042331 300
88 3300003841 Ga0055541_1006226 Ga0055541_10062261 300
89 3300009011 Ga0105251_10005324 Ga0105251_100053242 300
90 3300009036 Ga0105244_10025091 Ga0105244_100250913 300
91 3300011119 Ga0105246_10004382 Ga0105246_100043826 300
92 3300025224 Ga0209784_100037 Ga0209784_100037257 300
93 3300025225 Ga0209566_100401 Ga0209566_1004016 300
94 3300025233 Ga0209437_100706 Ga0209437_1007068 300
95 3300025735 Ga0207713_1022422 Ga0207713_10224222 300
96 3300028654 Ga0265322_10001094 Ga0265322_100010947 300
97 3300031238 Ga0265332_10001296 Ga0265332_1000129612 300
98 3300031242 Ga0265329_10007051 Ga0265329_100070511 300
99 3300031344 Ga0265316_10000112 Ga0265316_1000011214 300
100 3300031712 Ga0265342_10001535 Ga0265342_1000153514 300
101 3300048919 Ga0496116_0005646 Ga0496116_0005646_5659_6639 300
102 3300048919 Ga0496116_0048030 Ga0496116_0048030_415_1350 300
103 3300048925 Ga0496122_0034670 Ga0496122_0034670_3145_4080 300
104 3300048925 Ga0496122_0097044 Ga0496122_0097044_1002_1937 300
105 3300048926 Ga0496123_0129828 Ga0496123_0129828_310_1293 300
106 3300048927 Ga0496124_0072214 Ga0496124_0072214_144_1124 300
107 3300048928 Ga0496125_0220420 Ga0496125_0220420_13_948 300
108 iso_pu_bacteria 2643221543 2643735864 300
109 iso_pu_bacteria 2728369359 2730138521 300
110 iso_pu_bacteria 2802428803 2802439120 300
111 iso_pu_bacteria 2808606364 2808868760 300
112 iso_pu_bacteria 2821111986 2821115927 300
113 iso_pu_bacteria 2885526491 2885532301 300
114 iso_pu_bacteria 2889042446 2889047240 300
115 iso_pu_bacteria 2904162308 2904167820 300
116 iso_pu_bacteria 2904490793 2904494142 300
117 iso_pu_bacteria 2904755435 2904761097 300
118 iso_pu_bacteria 2907202186 2907206271 300
119 iso_pu_bacteria 2919160200 2919163215 300
120 iso_pu_bacteria 2939679117 2939684861 300
121 iso_pu_bacteria 2939702853 2939703986 300
122 iso_pu_bacteria 2945991243 2945997092 300
123 iso_pu_bacteria 2946053406 2946059758 300
124 iso_pu_bacteria 2964375228 2964377969 300
125 iso_pu_bacteria 8002317523 8002320417 300
126 3300003841 Ga0055541_1004506 Ga0055541_10045062 301
127 3300003841 Ga0055541_1006081 Ga0055541_10060812 301
128 3300025224 Ga0209784_100207 Ga0209784_10020720 301
129 3300025225 Ga0209566_100374 Ga0209566_10037410 301
130 3300025225 Ga0209566_100426 Ga0209566_10042622 301
131 3300025225 Ga0209566_101404 Ga0209566_1014045 301
132 3300025229 Ga0209147_102687 Ga0209147_1026873 301
133 3300025294 Ga0209025_1004668 Ga0209025_10046687 301
134 3300037312 Ga0395899_0004040 Ga0395899_0004040_3259_4230 301
135 3300037312 Ga0395899_0020310 Ga0395899_0020310_2908_3855 301
136 3300037312 Ga0395899_0020888 Ga0395899_0020888_3580_4527 301
137 3300037312 Ga0395899_0035478 Ga0395899_0035478_2649_3557 301
138 3300037312 Ga0395899_0056801 Ga0395899_0056801_1766_2743 301
139 3300037312 Ga0395899_0097822 Ga0395899_0097822_44_994 301
140 3300046457 Ga0495590_0043398 Ga0495590_0043398_33_989 301
141 3300048091 Ga0495626_0049896 Ga0495626_0049896_624_1589 301
142 3300048919 Ga0496116_0069306 Ga0496116_0069306_300_1262 301
143 3300048919 Ga0496116_0117642 Ga0496116_0117642_272_1240 301
144 3300048920 Ga0496117_0000384 Ga0496117_0000384_59526_60482 301
145 3300048922 Ga0496119_0001960 Ga0496119_0001960_13623_14579 301
146 3300048922 Ga0496119_0110274 Ga0496119_0110274_105_1061 301
147 3300048923 Ga0496120_0000037 Ga0496120_0000037_13623_14579 301
148 3300048923 Ga0496120_0000436 Ga0496120_0000436_49647_50603 301
149 3300048925 Ga0496122_0001053 Ga0496122_0001053_18973_19929 301
150 3300048926 Ga0496123_0000864 Ga0496123_0000864_28288_29244 301
151 3300048928 Ga0496125_0000084 Ga0496125_0000084_203242_204198 301
152 iso_pu_bacteria 2524023129 2524191020 301
153 iso_pu_bacteria 2585428059 2587739230 301
154 iso_pu_bacteria 2585428059 2587741464 301
155 iso_pu_bacteria 2593339198 2595317145 301
156 iso_pu_bacteria 2593339198 2595318840 301
157 iso_pu_bacteria 2593339198 2595320465 301
158 iso_pu_bacteria 2643221676 2644425821 301
159 iso_pu_bacteria 2643221676 2644427958 301
160 iso_pu_bacteria 2818991459 2819669996 301
161 iso_pu_bacteria 2818991459 2819670868 301
162 iso_pu_bacteria 2818991459 2819672004 301
163 iso_pu_bacteria 2818991459 2819672353 301
164 iso_pu_bacteria 2818991459 2819673988 301
165 iso_pu_bacteria 2821111986 2821113745 301
166 iso_pu_bacteria 2821111986 2821117372 301
167 iso_pu_bacteria 2857453340 2857455008 301
168 iso_pu_bacteria 2857453340 2857455020 301
169 iso_pu_bacteria 2857453340 2857455183 301
170 iso_pu_bacteria 2857453340 2857456170 301
171 iso_pu_bacteria 2885526491 2885529170 301
172 iso_pu_bacteria 2904113452 2904114280 301
173 iso_pu_bacteria 2904162308 2904164454 301
174 iso_pu_bacteria 2904755435 2904756042 301
175 iso_pu_bacteria 2904755435 2904757126 301
176 iso_pu_bacteria 2904755435 2904758089 301
177 iso_pu_bacteria 2904755435 2904758898 301
178 iso_pu_bacteria 2907202186 2907206707 301
179 iso_pu_bacteria 2919425241 2919426115 301
180 iso_pu_bacteria 2919425241 2919428410 301
181 iso_pu_bacteria 2919425241 2919429044 301
182 iso_pu_bacteria 2925326138 2925331347 301
183 iso_pu_bacteria 2925326138 2925333752 301
184 iso_pu_bacteria 2929206907 2929209134 301
185 iso_pu_bacteria 2929206907 2929209433 301
186 iso_pu_bacteria 2971403814 2971407166 301
187 iso_pu_bacteria 2971410472 2971410994 301
188 iso_pu_bacteria 2971410472 2971411136 301
189 iso_pu_bacteria 2971410472 2971411935 301
190 iso_pu_bacteria 2971410472 2971412486 301
191 iso_pu_bacteria 2971410472 2971416123 301
192 iso_pu_bacteria 2980182181 2980182277 301
193 iso_pu_bacteria 2980182181 2980182314 301
194 iso_pu_bacteria 2980182181 2980183027 301
195 iso_pu_bacteria 2980182181 2980184932 301
196 iso_pu_bacteria 2980182181 2980185625 301
197 iso_pu_bacteria 2980182181 2980186435 301
198 iso_pu_bacteria 2980182181 2980188395 301
199 iso_pu_bacteria 2980182181 2980189933 301
200 iso_pu_bacteria 8002317523 8002318399 301
201 iso_pu_bacteria 8046991243 8046996749 301
202 iso_pu_bacteria 8054795415 8054796083 301
203 iso_pu_bacteria 8054795415 8054798428 301
204 iso_pu_bacteria 8054795415 8054798792 301
205 iso_pu_bacteria 8054795415 8054799277 301
206 iso_pu_bacteria 8054795415 8054800783 301
207 iso_pu_bacteria 8054795415 8054802698 301
208 iso_pu_bacteria 8054795415 8054803747 301
209 iso_pu_bacteria 8056533031 8056537764 301
210 iso_pu_bacteria 8056533031 8056538017 301
211 iso_pu_bacteria 8056533031 8056538360 301
212 iso_pu_bacteria 8056533031 8056539011 301
213 3300003751 Ga0055538_1000166 Ga0055538_10001664 302
214 3300025224 Ga0209784_100171 Ga0209784_10017147 302
215 iso_pu_bacteria 2579778775 2580933858 302
216 iso_pu_bacteria 2619619294 2621274300 302
217 iso_pu_bacteria 2971511577 2971516134 302
218 iso_pu_bacteria 8054795415 8054799722 302

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

122

331

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tqu-assembly1.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.9266 4 295
4tqu-assembly1.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.9172 4 295
4xtc-assembly1.cif.gz_M crystal structure of bacterial alginate abc transporter in complex with alginate pentasaccharide-bound periplasmic protein 0.9166 4 299
4tqv-assembly4.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.9154 4 295
4xtc-assembly1.cif.gz_M crystal structure of bacterial alginate abc transporter in complex with alginate pentasaccharide-bound periplasmic protein 0.9106 4 299
ID Description Score Start End Superfamily
4tquM01 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.939 54 295 1.10.3720.10
4tquM01 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9243 54 295 1.10.3720.10
af_P71896_49_286_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8901 53 293 1.10.3720.10
af_O53484_49_294_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8812 54 297 1.10.3720.10
af_I6XFF3_60_302_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8799 53 293 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A355SGA3-F1-model_v4 Protein lplB 0.973 35 300 GO:0005886
GO:0055085
AF-A0A5R9GA07-F1-model_v4 Sugar ABC transporter permease 0.971 18 300 GO:0005886
GO:0055085
AF-A0A2V5K2Y4-F1-model_v4 Protein lplB 0.9699 20 300 GO:0005886
GO:0055085
AF-A0A2N1RFR5-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9696 3 300 GO:0005886
GO:0055085
AF-A0A3P3UBD7-F1-model_v4 Sugar ABC transporter permease 0.9694 39 300 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
89.36 0.8 High
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Predicted Structure (AlphaFold2)

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