F330323

General Info

Members Datasets Scaffolds Average Seq Length
218 148 207 672

Family's Representative Sequence

Representative Sequence 3300046522|Ga0495643_0000041|Ga0495643_0000041_89598_91859
Length 753
Sequence VSQETCLRLVAHAVVQGVAGARNHSVRATNQRWRPHRFAQTVAGGVRPQARADRLYGGTPPTQSQAPGGMTMNLMTGAALARIATGIATGTAMVLATMPAQAEEASAAGADGNSSEIVVFGRGEAKIGTANAASEGSVSGSDLLVRPLLRVAELLEAVPGMVAAQHSGSGKANQYFLRGFNLDHGTDFTTYIDGVQMNLRSHGHGQGYLDLNGLIPEIVAREDFRKGPYRADGGDFALAGAAYMTTINGFDRPWISVEGGSYKSGRLAAGGTIKDVAGGSLTLVGQAKRYDGPWQEGEHLRHYSGFAKYTAPAGEGILEASLHAYHAIWRPTEQIPERIIGSAQCPDEFCSPDPSARGRTTRLVGNIAVRQPNWNANVYAQYYDWNMYSNPTYADPDGTSAQIDQFDKRWIVGITARKQWEVGSTLQLSLGTENRYDHIGNVGVNRTDTRAFLSSLGRYHVEELSGALYGEATWKPVRGLRLTGGLRGDYYHYTVRARDAVAAELGTGSGHDSIVSPKVSAAYEIVPQFEVYANWGRGFHSNDVRGAVNVESPVPVLVRGTGKELGGRLQLGTVSLTATYWWLDVGSELRFVGDSNAVEPTGASKRHGYEVVGFWRPLPWLALDGSYVASHSRYDNGDRIPNAVENAVSAGAAIVLDPWEASVRVRHLGPYPLIEDNSLRDKGSTIFNARAAWKRRKIEIYGEVLNIFDSHDKDIAYYYESYIPAFDTNGPVEGRLSRVIEPRTFKIGARYTF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
3 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
4 2643221640 Caulobacter sp. Root342 Isolate Unclassified
5 2643221642 Caulobacter sp. Root343 Isolate Unclassified
6 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
7 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
8 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
9 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
10 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
11 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
12 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
13 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
14 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
15 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
16 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
17 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
18 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
24 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
47 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
59 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
96 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
97 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
103 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
108 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
111 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
112 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
113 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
125 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
126 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
131 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
134 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
135 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
136 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
137 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
138 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
139 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
140 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
141 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
142 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
143 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
144 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
145 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
146 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.95
Metatranscriptomes 0
Isolates 5.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.06
Nodule 0
Rhizoplane 4.13
Rhizosphere 64.68
Stem 0
Stem Tuber 0
Unclassified 15.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3496163 2162886007 Bacteria 5834
2 JGI24736J21556_1000047 3300001904 Bacteria 19781
3 JGI24740J21852_10001001 3300001979 Bacteria 12648
4 JGI24740J21852_10007756 3300001979 Bacteria 4337
5 JGI24739J22299_10000652 3300001989 Bacteria 12449
6 JGI24739J22299_10011541 3300001989 Bacteria 3261
7 JGI24737J22298_10002698 3300001990 Bacteria 6277
8 JGI24737J22298_10004301 3300001990 Bacteria 4974
9 JGI24735J21928_10000204 3300002067 Bacteria 20871
10 JGI24735J21928_10009148 3300002067 Bacteria 3187
11 JGI24738J21930_10000686 3300002075 Bacteria 9770
12 Ga0055526_1000046 3300003771 Bacteria 120614
13 Ga0055530_10000140 3300003791 Bacteria 64560
14 Ga0055530_10000278 3300003791 Bacteria 46428
15 Ga0055531_10000094 3300003794 Bacteria 96266
16 Ga0065165_1000412 3300005262 Bacteria 68242
17 Ga0065704_10070440 3300005289 Bacteria 24705
18 Ga0065704_10087437 3300005289 Bacteria 3026
19 Ga0070670_100014682 3300005331 Bacteria 6725
20 Ga0070660_100027404 3300005339 Bacteria 4251
21 Ga0070661_100006145 3300005344 Bacteria 8273
22 Ga0070668_100011184 3300005347 Bacteria 6683
23 Ga0070669_100001799 3300005353 Bacteria 15418
24 Ga0070671_100036805 3300005355 Bacteria 4057
25 Ga0070671_100043606 3300005355 Bacteria 3727
26 Ga0070659_100000661 3300005366 Bacteria 25049
27 Ga0070659_100059115 3300005366 Bacteria 3026
28 Ga0070667_100001781 3300005367 Bacteria 19194
29 Ga0070662_100009193 3300005457 Bacteria 6452
30 Ga0068853_100061030 3300005539 Bacteria 3260
31 Ga0068853_100082997 3300005539 Bacteria 2807
32 Ga0070665_100002569 3300005548 Bacteria 19903
33 Ga0070665_100078646 3300005548 Bacteria 3304
34 Ga0068855_100064549 3300005563 Bacteria 4270
35 Ga0068854_100016284 3300005578 Bacteria 4953
36 Ga0068854_100033847 3300005578 Bacteria 3564
37 Ga0068856_100050423 3300005614 Bacteria 4103
38 Ga0068856_100087541 3300005614 Bacteria 3096
39 Ga0068852_100034363 3300005616 Bacteria 4217
40 Ga0068859_100001571 3300005617 Bacteria 23275
41 Ga0068859_100087877 3300005617 Bacteria 3157
42 Ga0068864_100000614 3300005618 Bacteria 30079
43 Ga0068864_100133585 3300005618 Bacteria 2232
44 Ga0068861_100000147 3300005719 Bacteria 36347
45 Ga0068861_100115453 3300005719 Bacteria 2157
46 Ga0068851_10014951 3300005834 Bacteria 3692
47 Ga0068863_100003707 3300005841 Bacteria 15113
48 Ga0068863_100081064 3300005841 Bacteria 3074
49 Ga0068858_100000158 3300005842 Bacteria 71944
50 Ga0081455_10002672 3300005937 Bacteria 21081
51 Ga0097620_100001571 3300006931 Bacteria 23275
52 Ga0097620_100087878 3300006931 Bacteria 3157
53 Ga0105251_10005680 3300009011 Bacteria 8100
54 Ga0105250_10023729 3300009092 Bacteria 2472
55 Ga0105240_10068900 3300009093 Bacteria 4381
56 Ga0105243_10041358 3300009148 Bacteria 3605
57 Ga0105248_10009872 3300009177 Bacteria 10511
58 Ga0105248_10015538 3300009177 Bacteria 8391
59 Ga0105249_10016910 3300009553 Bacteria 6472
60 Ga0105148_100330 3300009978 Bacteria 5921
61 Ga0105148_100419 3300009978 Bacteria 4247
62 Ga0157371_10028737 3300013102 Bacteria 4024
63 Ga0157370_10058772 3300013104 Bacteria 3654
64 Ga0157370_10110699 3300013104 Bacteria 2567
65 Ga0157369_10083600 3300013105 Bacteria 3413
66 Ga0163162_10005447 3300013306 Bacteria 12295
67 Ga0157372_10054542 3300013307 Bacteria 4460
68 Ga0209026_1000527 3300025250 Bacteria 26703
69 Ga0209675_1000143 3300025291 Bacteria 95249
70 Ga0209564_1000277 3300025295 Bacteria 105818
71 Ga0209758_1000528 3300025297 Bacteria 61055
72 Ga0209050_1000071 3300025298 Bacteria 295478
73 Ga0209050_1000141 3300025298 Bacteria 173116
74 Ga0209050_1000638 3300025298 Bacteria 54267
75 Ga0209257_1000027 3300025304 Bacteria 703541
76 Ga0209257_1000288 3300025304 Bacteria 111141
77 Ga0207656_10023232 3300025321 Bacteria 2495
78 Ga0207696_1000569 3300025711 Bacteria 29091
79 Ga0207647_10009354 3300025904 Bacteria 6965
80 Ga0207647_10020460 3300025904 Bacteria 4438
81 Ga0207654_10002677 3300025911 Bacteria 9049
82 Ga0207695_10051481 3300025913 Bacteria 4324
83 Ga0207671_10035254 3300025914 Bacteria 3715
84 Ga0207657_10000436 3300025919 Bacteria 44477
85 Ga0207657_10094489 3300025919 Bacteria 2490
86 Ga0207649_10009703 3300025920 Bacteria 5272
87 Ga0207649_10021556 3300025920 Bacteria 3711
88 Ga0207681_10001440 3300025923 Bacteria 15309
89 Ga0207694_10008518 3300025924 Bacteria 7745
90 Ga0207650_10012960 3300025925 Bacteria 5764
91 Ga0207644_10004817 3300025931 Bacteria 8789
92 Ga0207644_10044444 3300025931 Bacteria 3156
93 Ga0207690_10004527 3300025932 Bacteria 8209
94 Ga0207690_10061100 3300025932 Bacteria 2560
95 Ga0207706_10018571 3300025933 Bacteria 6257
96 Ga0207706_10018591 3300025933 Bacteria 6253
97 Ga0207711_10005839 3300025941 Bacteria 10395
98 Ga0207711_10007881 3300025941 Bacteria 8911
99 Ga0207711_10012309 3300025941 Bacteria 7111
100 Ga0207679_10009601 3300025945 Bacteria 6202
101 Ga0207667_10005038 3300025949 Bacteria 16141
102 Ga0207667_10053169 3300025949 Bacteria 4262
103 Ga0207668_10004028 3300025972 Bacteria 8642
104 Ga0207640_10020290 3300025981 Bacteria 3944
105 Ga0207658_10001179 3300025986 Bacteria 20859
106 Ga0207703_10000191 3300026035 Bacteria 71974
107 Ga0207639_10031706 3300026041 Bacteria 3886
108 Ga0207639_10032777 3300026041 Bacteria 3827
109 Ga0207678_10013384 3300026067 Bacteria 7200
110 Ga0207641_10002539 3300026088 Bacteria 16794
111 Ga0207676_10001908 3300026095 Bacteria 15228
112 Ga0207674_10017877 3300026116 Bacteria 7728
113 Ga0207675_100015963 3300026118 Bacteria 7008
114 Ga0207698_10019526 3300026142 Bacteria 4642
115 Ga0268266_10006247 3300028379 Bacteria 10936
116 Ga0268265_10028941 3300028380 Bacteria 3971
117 Ga0307412_10025461 3300031911 Bacteria 3666
118 Ga0466972_0018817 3300044658 Bacteria 3452
119 Ga0466964_0026273 3300044706 Bacteria 2279
120 Ga0495627_000162 3300046453 Bacteria 76049
121 Ga0495638_0000277 3300046460 Bacteria 69421
122 Ga0495638_0000371 3300046460 Bacteria 55687
123 Ga0495638_0022964 3300046460 Bacteria 4087
124 Ga0495650_0002130 3300046471 Bacteria 16873
125 Ga0495583_0000307 3300046506 Bacteria 77441
126 Ga0495583_0000419 3300046506 Bacteria 64108
127 Ga0495606_0002552 3300046507 Bacteria 20922
128 Ga0495610_0000057 3300046512 Bacteria 138069
129 Ga0495610_0000059 3300046512 Bacteria 134692
130 Ga0495632_0001746 3300046519 Bacteria 17613
131 Ga0495643_0000041 3300046522 Bacteria 231342
132 Ga0495648_0000029 3300046524 Bacteria 223499
133 Ga0495648_0000199 3300046524 Bacteria 69421
134 Ga0495586_0043567 3300046535 Bacteria 2417
135 Ga0495622_0022599 3300046557 Bacteria 2931
136 Ga0495668_0000014 3300046616 Bacteria 442055
137 Ga0495625_0052311 3300046660 Bacteria 2925
138 Ga0495671_0000135 3300046692 Bacteria 65732
139 Ga0495671_0007264 3300046692 Bacteria 6329
140 Ga0495673_0000303 3300047469 Bacteria 65717
141 Ga0495673_0004963 3300047469 Bacteria 8183
142 Ga0495681_0000045 3300047470 Bacteria 111769
143 Ga0495615_0000009 3300048090 Bacteria 76727
144 Ga0496101_0063338 3300048904 Bacteria 2691
145 Ga0496102_0002270 3300048905 Bacteria 16438
146 Ga0496102_0026715 3300048905 Bacteria 5152
147 Ga0496103_0000489 3300048906 Bacteria 32960
148 Ga0496104_0002054 3300048907 Bacteria 17485
149 Ga0496109_0012389 3300048912 Bacteria 7364
150 Ga0496110_0041229 3300048913 Bacteria 4028
151 Ga0496113_0024648 3300048916 Bacteria 4279
152 Ga0496117_0014148 3300048920 Bacteria 6896
153 Ga0496117_0015048 3300048920 Bacteria 6627
154 Ga0496118_0003882 3300048921 Bacteria 18351
155 Ga0496118_0019016 3300048921 Bacteria 6158
156 Ga0496121_0000059 3300048924 Bacteria 278177
157 Ga0496121_0046857 3300048924 Bacteria 3695
158 Ga0496121_0055408 3300048924 Bacteria 3303
159 Ga0496122_0001343 3300048925 Bacteria 40125
160 Ga0496122_0003599 3300048925 Bacteria 20191
161 Ga0496122_0024538 3300048925 Bacteria 5274
162 Ga0496122_0027411 3300048925 Bacteria 4871
163 Ga0496123_0000300 3300048926 Bacteria 96475
164 Ga0496123_0001626 3300048926 Bacteria 30247
165 Ga0496123_0033078 3300048926 Bacteria 3728
166 Ga0496123_0040034 3300048926 Bacteria 3271
167 Ga0496124_0003451 3300048927 Bacteria 19331
168 Ga0496124_0005387 3300048927 Bacteria 14445
169 Ga0496124_0011740 3300048927 Bacteria 8736
170 Ga0496124_0031066 3300048927 Bacteria 4732
171 Ga0496124_0061569 3300048927 Bacteria 3145
172 Ga0496124_0096985 3300048927 Bacteria 2394
173 Ga0496125_0016458 3300048928 Bacteria 7098
174 Ga0496125_0018607 3300048928 Bacteria 6594
175 Ga0496125_0027179 3300048928 Bacteria 5192
176 Ga0496125_0101312 3300048928 Bacteria 2120
177 Ga0496126_0001245 3300048929 Bacteria 41334
178 Ga0496126_0109785 3300048929 Bacteria 2404
179 Ga0501034_0004809 3300049571 Bacteria 14936
180 Ga0501223_000020 3300049663 Bacteria 67103
181 Ga0501224_000004 3300049664 Bacteria 169090
182 Ga0501044_0001689 3300049823 Bacteria 25923
183 Ga0501226_000018 3300049853 Bacteria 147268
184 Ga0500643_001921 3300053087 Bacteria 11276
185 Ga0500643_002952 3300053087 Bacteria 8425
186 Ga0500643_003961 3300053087 Bacteria 6850
187 Ga0500643_007415 3300053087 Bacteria 4428
188 Ga0500643_012480 3300053087 Bacteria 3041
189 Ga0500644_0000043 3300053088 Bacteria 76139
190 Ga0500641_0000386 3300053096 Bacteria 16347
191 Ga0500641_0011635 3300053096 Bacteria 3197
192 Ga0500556_0001838 3300053104 Bacteria 7733
193 Ga0500592_003222 3300053116 Bacteria 2605
194 Ga0500594_0008407 3300053118 Bacteria 2353
195 Ga0500642_0000008 3300053130 Bacteria 293258
196 Ga0500564_000055 3300053138 Bacteria 29873
197 Ga0500616_0000162 3300053153 Bacteria 111421
198 Ga0500616_0036525 3300053153 Bacteria 2666
199 Ga0500622_0013016 3300053156 Bacteria 4495
200 Ga0500622_0015274 3300053156 Bacteria 4115
201 Ga0500622_0021991 3300053156 Bacteria 3384
202 Ga0500624_000055 3300053157 Bacteria 72708
203 Ga0500636_0004140 3300053177 Bacteria 8205
204 Ga0500645_000537 3300053730 Bacteria 25218
205 Ga0500645_002674 3300053730 Bacteria 7759
206 Ga0501084_0038826 3300054114 Bacteria 3981
207 Ga0501082_0011471 3300060353 Bacteria 7626

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005539 Ga0068853_100082997 Ga0068853_1000829972 529
2 3300026041 Ga0207639_10031706 Ga0207639_100317061 529
3 3300053116 Ga0500592_003222 Ga0500592_003222_718_2592 603
4 3300053087 Ga0500643_002952 Ga0500643_002952_1054_3129 613
5 3300005719 Ga0068861_100000147 Ga0068861_1000001475 627
6 3300026118 Ga0207675_100015963 Ga0207675_1000159635 627
7 3300048925 Ga0496122_0024538 Ga0496122_0024538_2932_4923 630
8 3300048926 Ga0496123_0033078 Ga0496123_0033078_176_2167 630
9 3300048926 Ga0496123_0040034 Ga0496123_0040034_146_2137 630
10 3300048927 Ga0496124_0011740 Ga0496124_0011740_5487_7478 630
11 3300048928 Ga0496125_0101312 Ga0496125_0101312_142_2088 634
12 3300046507 Ga0495606_0002552 Ga0495606_0002552_8164_10260 635
13 iso_pu_bacteria 2585428106 2587919566 635
14 iso_pu_bacteria 2643221640 2644226501 635
15 iso_pu_bacteria 2643221642 2644235989 635
16 iso_pu_bacteria 2884960567 2884963829 635
17 iso_pu_bacteria 2928531327 2928534019 635
18 3300005937 Ga0081455_10002672 Ga0081455_100026726 636
19 3300053096 Ga0500641_0000386 Ga0500641_0000386_8418_10442 637
20 3300031911 Ga0307412_10025461 Ga0307412_100254613 639
21 3300046616 Ga0495668_0000014 Ga0495668_0000014_432551_434536 639
22 3300048927 Ga0496124_0096985 Ga0496124_0096985_197_2182 639
23 3300005563 Ga0068855_100064549 Ga0068855_1000645493 640
24 3300025949 Ga0207667_10053169 Ga0207667_100531692 640
25 3300005834 Ga0068851_10014951 Ga0068851_100149512 641
26 3300025932 Ga0207690_10061100 Ga0207690_100611002 641
27 3300046506 Ga0495583_0000307 Ga0495583_0000307_38122_40125 642
28 3300053156 Ga0500622_0015274 Ga0500622_0015274_22_2172 642
29 3300060353 Ga0501082_0011471 Ga0501082_0011471_3422_5494 642
30 3300009148 Ga0105243_10041358 Ga0105243_100413583 644
31 3300053157 Ga0500624_000055 Ga0500624_000055_33542_35587 644
32 3300053177 Ga0500636_0004140 Ga0500636_0004140_3585_5630 644
33 3300005289 Ga0065704_10087437 Ga0065704_100874371 645
34 3300005548 Ga0070665_100078646 Ga0070665_1000786462 646
35 3300054114 Ga0501084_0038826 Ga0501084_0038826_1914_3935 647
36 3300005262 Ga0065165_1000412 Ga0065165_100041239 649
37 3300044658 Ga0466972_0018817 Ga0466972_0018817_1417_3408 649
38 3300046460 Ga0495638_0000371 Ga0495638_0000371_53547_55571 649
39 3300001904 JGI24736J21556_1000047 JGI24736J21556_100004713 650
40 3300001979 JGI24740J21852_10001001 JGI24740J21852_100010017 650
41 3300001989 JGI24739J22299_10000652 JGI24739J22299_100006527 650
42 3300001990 JGI24737J22298_10002698 JGI24737J22298_100026983 650
43 3300002067 JGI24735J21928_10000204 JGI24735J21928_1000020415 650
44 3300002075 JGI24738J21930_10000686 JGI24738J21930_100006866 650
45 3300005339 Ga0070660_100027404 Ga0070660_1000274043 650
46 3300005366 Ga0070659_100059115 Ga0070659_1000591151 650
47 3300005578 Ga0068854_100033847 Ga0068854_1000338473 650
48 3300005614 Ga0068856_100050423 Ga0068856_1000504234 650
49 3300005719 Ga0068861_100115453 Ga0068861_1001154531 650
50 3300013104 Ga0157370_10058772 Ga0157370_100587723 650
51 3300013307 Ga0157372_10054542 Ga0157372_100545423 650
52 3300025904 Ga0207647_10009354 Ga0207647_100093544 650
53 3300025911 Ga0207654_10002677 Ga0207654_100026774 650
54 3300025914 Ga0207671_10035254 Ga0207671_100352543 650
55 3300025919 Ga0207657_10000436 Ga0207657_100004365 650
56 3300025920 Ga0207649_10021556 Ga0207649_100215563 650
57 3300025924 Ga0207694_10008518 Ga0207694_100085183 650
58 3300025933 Ga0207706_10018571 Ga0207706_100185714 650
59 3300025949 Ga0207667_10005038 Ga0207667_1000503813 650
60 3300026067 Ga0207678_10013384 Ga0207678_100133844 650
61 3300026116 Ga0207674_10017877 Ga0207674_100178774 650
62 3300026142 Ga0207698_10019526 Ga0207698_100195265 650
63 iso_pu_bacteria 2928968154 2928970024 651
64 3300009177 Ga0105248_10009872 Ga0105248_100098723 652
65 3300049823 Ga0501044_0001689 Ga0501044_0001689_8209_10239 652
66 3300053087 Ga0500643_007415 Ga0500643_007415_1939_3903 652
67 3300003791 Ga0055530_10000140 Ga0055530_1000014035 654
68 3300025297 Ga0209758_1000528 Ga0209758_100052818 654
69 3300025298 Ga0209050_1000141 Ga0209050_100014168 654
70 3300025304 Ga0209257_1000288 Ga0209257_10002889 654
71 3300046460 Ga0495638_0022964 Ga0495638_0022964_884_2926 654
72 3300053153 Ga0500616_0000162 Ga0500616_0000162_20006_22060 654
73 3300005617 Ga0068859_100001571 Ga0068859_1000015713 656
74 3300006931 Ga0097620_100001571 Ga0097620_1000015713 656
75 3300025941 Ga0207711_10005839 Ga0207711_100058398 656
76 3300053153 Ga0500616_0036525 Ga0500616_0036525_469_2484 656
77 3300053730 Ga0500645_002674 Ga0500645_002674_5733_7748 656
78 3300053087 Ga0500643_012480 Ga0500643_012480_11_1999 657
79 3300044706 Ga0466964_0026273 Ga0466964_0026273_164_2227 658
80 3300046535 Ga0495586_0043567 Ga0495586_0043567_24_2039 658
81 3300053087 Ga0500643_003961 Ga0500643_003961_2600_4627 658
82 3300053096 Ga0500641_0011635 Ga0500641_0011635_703_2730 658
83 3300005344 Ga0070661_100006145 Ga0070661_1000061455 659
84 3300005617 Ga0068859_100087877 Ga0068859_1000878772 659
85 3300006931 Ga0097620_100087878 Ga0097620_1000878782 659
86 3300005618 Ga0068864_100000614 Ga0068864_10000061419 660
87 3300005841 Ga0068863_100081064 Ga0068863_1000810643 660
88 3300026095 Ga0207676_10001908 Ga0207676_100019085 660
89 3300053730 Ga0500645_000537 Ga0500645_000537_21555_23567 660
90 3300005841 Ga0068863_100003707 Ga0068863_1000037076 662
91 3300026088 Ga0207641_10002539 Ga0207641_100025397 662
92 3300049571 Ga0501034_0004809 Ga0501034_0004809_2922_4979 662
93 iso_pu_bacteria 2599185359 2600225484 662
94 iso_pu_bacteria 2818991466 2819713919 662
95 3300046512 Ga0495610_0000059 Ga0495610_0000059_74939_76966 664
96 3300048925 Ga0496122_0003599 Ga0496122_0003599_8493_10514 664
97 3300048926 Ga0496123_0001626 Ga0496123_0001626_8477_10498 664
98 3300049663 Ga0501223_000020 Ga0501223_000020_40981_43083 664
99 3300049664 Ga0501224_000004 Ga0501224_000004_45865_47967 664
100 3300049853 Ga0501226_000018 Ga0501226_000018_121103_123205 664
101 3300053156 Ga0500622_0021991 Ga0500622_0021991_327_2381 664
102 3300005366 Ga0070659_100000661 Ga0070659_10000066118 665
103 3300009978 Ga0105148_100330 Ga0105148_1003306 665
104 3300025919 Ga0207657_10094489 Ga0207657_100944892 665
105 3300025920 Ga0207649_10009703 Ga0207649_100097031 665
106 3300025932 Ga0207690_10004527 Ga0207690_100045271 665
107 3300025945 Ga0207679_10009601 Ga0207679_100096014 665
108 3300053104 Ga0500556_0001838 Ga0500556_0001838_5063_7084 665
109 3300046660 Ga0495625_0052311 Ga0495625_0052311_470_2494 666
110 3300025250 Ga0209026_1000527 Ga0209026_10005278 667
111 3300053130 Ga0500642_0000008 Ga0500642_0000008_89035_91065 667
112 3300001979 JGI24740J21852_10007756 JGI24740J21852_100077561 668
113 3300001989 JGI24739J22299_10011541 JGI24739J22299_100115412 668
114 3300001990 JGI24737J22298_10004301 JGI24737J22298_100043015 668
115 3300002067 JGI24735J21928_10009148 JGI24735J21928_100091481 668
116 3300005457 Ga0070662_100009193 Ga0070662_1000091932 668
117 3300005539 Ga0068853_100061030 Ga0068853_1000610301 668
118 3300005578 Ga0068854_100016284 Ga0068854_1000162845 668
119 3300005614 Ga0068856_100087541 Ga0068856_1000875412 668
120 3300005616 Ga0068852_100034363 Ga0068852_1000343633 668
121 3300009093 Ga0105240_10068900 Ga0105240_100689002 668
122 3300013102 Ga0157371_10028737 Ga0157371_100287372 668
123 3300013104 Ga0157370_10110699 Ga0157370_101106992 668
124 3300013105 Ga0157369_10083600 Ga0157369_100836002 668
125 3300025321 Ga0207656_10023232 Ga0207656_100232322 668
126 3300025904 Ga0207647_10020460 Ga0207647_100204602 668
127 3300025913 Ga0207695_10051481 Ga0207695_100514814 668
128 3300025933 Ga0207706_10018591 Ga0207706_100185916 668
129 3300025981 Ga0207640_10020290 Ga0207640_100202902 668
130 3300026041 Ga0207639_10032777 Ga0207639_100327772 668
131 3300048090 Ga0495615_0000009 Ga0495615_0000009_38721_40775 668
132 3300048913 Ga0496110_0041229 Ga0496110_0041229_1507_3519 668
133 3300048925 Ga0496122_0001343 Ga0496122_0001343_1676_3730 668
134 3300048926 Ga0496123_0000300 Ga0496123_0000300_19533_21587 668
135 3300048927 Ga0496124_0031066 Ga0496124_0031066_488_2542 668
136 3300025298 Ga0209050_1000638 Ga0209050_100063813 669
137 3300053087 Ga0500643_001921 Ga0500643_001921_4029_6077 669
138 iso_pu_bacteria 2928968154 2928972197 670
139 iso_pu_bacteria 2879163058 2879166567 671
140 iso_pu_bacteria 2928526807 2928528477 671
141 3300009177 Ga0105248_10015538 Ga0105248_100155388 672
142 3300025941 Ga0207711_10012309 Ga0207711_100123092 672
143 3300048905 Ga0496102_0026715 Ga0496102_0026715_266_2311 672
144 3300048920 Ga0496117_0014148 Ga0496117_0014148_4645_6690 672
145 3300048921 Ga0496118_0003882 Ga0496118_0003882_5754_7799 672
146 3300048924 Ga0496121_0000059 Ga0496121_0000059_154955_157000 672
147 3300046453 Ga0495627_000162 Ga0495627_000162_1489_3516 673
148 3300046471 Ga0495650_0002130 Ga0495650_0002130_13539_15566 673
149 3300046557 Ga0495622_0022599 Ga0495622_0022599_304_2349 673
150 3300046692 Ga0495671_0007264 Ga0495671_0007264_1395_3440 673
151 3300047470 Ga0495681_0000045 Ga0495681_0000045_1479_3506 673
152 3300048912 Ga0496109_0012389 Ga0496109_0012389_2405_4432 673
153 3300048916 Ga0496113_0024648 Ga0496113_0024648_334_2361 673
154 3300053118 Ga0500594_0008407 Ga0500594_0008407_146_2191 673
155 3300053156 Ga0500622_0013016 Ga0500622_0013016_1751_3790 673
156 3300025291 Ga0209675_1000143 Ga0209675_100014352 674
157 3300025711 Ga0207696_1000569 Ga0207696_10005692 674
158 3300025923 Ga0207681_10001440 Ga0207681_1000144014 674
159 3300025931 Ga0207644_10004817 Ga0207644_100048174 674
160 3300025972 Ga0207668_10004028 Ga0207668_100040283 674
161 3300025986 Ga0207658_10001179 Ga0207658_100011794 674
162 3300028380 Ga0268265_10028941 Ga0268265_100289414 674
163 3300046524 Ga0495648_0000029 Ga0495648_0000029_26751_28790 674
164 3300047469 Ga0495673_0004963 Ga0495673_0004963_3488_5527 674
165 3300053088 Ga0500644_0000043 Ga0500644_0000043_47485_49524 674
166 3300053138 Ga0500564_000055 Ga0500564_000055_1095_3134 674
167 3300003771 Ga0055526_1000046 Ga0055526_100004661 675
168 3300005842 Ga0068858_100000158 Ga0068858_10000015819 675
169 3300025295 Ga0209564_1000277 Ga0209564_100027747 675
170 3300026035 Ga0207703_10000191 Ga0207703_1000019119 675
171 3300048924 Ga0496121_0046857 Ga0496121_0046857_186_2222 675
172 3300048927 Ga0496124_0005387 Ga0496124_0005387_11294_13330 675
173 3300048928 Ga0496125_0018607 Ga0496125_0018607_3404_5440 675
174 3300048929 Ga0496126_0109785 Ga0496126_0109785_288_2324 675
175 3300005331 Ga0070670_100014682 Ga0070670_1000146824 676
176 3300005355 Ga0070671_100043606 Ga0070671_1000436063 676
177 3300005618 Ga0068864_100133585 Ga0068864_1001335851 676
178 3300025925 Ga0207650_10012960 Ga0207650_100129606 676
179 3300025931 Ga0207644_10044444 Ga0207644_100444442 676
180 3300025941 Ga0207711_10007881 Ga0207711_100078812 676
181 3300005289 Ga0065704_10070440 Ga0065704_100704404 677
182 3300005347 Ga0070668_100011184 Ga0070668_1000111843 677
183 3300005353 Ga0070669_100001799 Ga0070669_10000179914 677
184 3300005355 Ga0070671_100036805 Ga0070671_1000368052 677
185 3300005367 Ga0070667_100001781 Ga0070667_10000178110 677
186 3300005548 Ga0070665_100002569 Ga0070665_10000256919 677
187 3300028379 Ga0268266_10006247 Ga0268266_100062473 677
188 3300009011 Ga0105251_10005680 Ga0105251_100056801 678
189 3300009978 Ga0105148_100419 Ga0105148_1004194 678
190 3300048927 Ga0496124_0061569 Ga0496124_0061569_852_2915 678
191 3300048928 Ga0496125_0016458 Ga0496125_0016458_1903_3966 678
192 3300046460 Ga0495638_0000277 Ga0495638_0000277_51081_53132 680
193 3300046506 Ga0495583_0000419 Ga0495583_0000419_48792_50843 680
194 3300046519 Ga0495632_0001746 Ga0495632_0001746_13283_15334 680
195 3300046524 Ga0495648_0000199 Ga0495648_0000199_51081_53132 680
196 3300046692 Ga0495671_0000135 Ga0495671_0000135_13266_15317 680
197 3300047469 Ga0495673_0000303 Ga0495673_0000303_13266_15317 680
198 3300003791 Ga0055530_10000278 Ga0055530_1000027833 681
199 3300003794 Ga0055531_10000094 Ga0055531_1000009432 681
200 3300025298 Ga0209050_1000071 Ga0209050_1000071241 681
201 3300025304 Ga0209257_1000027 Ga0209257_100002763 681
202 3300046512 Ga0495610_0000057 Ga0495610_0000057_3030_5288 682
203 3300046522 Ga0495643_0000041 Ga0495643_0000041_89598_91859 683
204 2162886007 SwRhRL2b_contig_3496163 SwRhRL2b_0416.00007240 687
205 3300009092 Ga0105250_10023729 Ga0105250_100237291 687
206 3300009553 Ga0105249_10016910 Ga0105249_100169104 687
207 3300013306 Ga0163162_10005447 Ga0163162_1000544711 687
208 3300048904 Ga0496101_0063338 Ga0496101_0063338_388_2451 687
209 3300048905 Ga0496102_0002270 Ga0496102_0002270_9871_11934 687
210 3300048906 Ga0496103_0000489 Ga0496103_0000489_4364_6427 687
211 3300048907 Ga0496104_0002054 Ga0496104_0002054_13361_15424 687
212 3300048920 Ga0496117_0015048 Ga0496117_0015048_184_2247 687
213 3300048921 Ga0496118_0019016 Ga0496118_0019016_145_2208 687
214 3300048924 Ga0496121_0055408 Ga0496121_0055408_176_2239 687
215 3300048925 Ga0496122_0027411 Ga0496122_0027411_747_2810 687
216 3300048927 Ga0496124_0003451 Ga0496124_0003451_12844_14907 687
217 3300048928 Ga0496125_0027179 Ga0496125_0027179_2062_4125 687
218 3300048929 Ga0496126_0001245 Ga0496126_0001245_34765_36828 687

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

129

241

0.94

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

337

707

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rgn-assembly1.cif.gz_A crystal structure of spin-labeled btub w371r1 0.8073 66 687
3rgm-assembly1.cif.gz_A crystal structure of spin-labeled btub t156r1 0.8026 66 687
3m8b-assembly1.cif.gz_A crystal structure of spin-labeled btub v10r1 in the apo state 0.7955 66 687
1nqe-assembly1.cif.gz_A outer membrane cobalamin transporter (btub) from e. coli 0.7952 66 687
1kmp-assembly1.cif.gz_A crystal structure of the outer membrane transporter feca complexed with ferric citrate 0.7942 65 687
ID Description Score Start End Superfamily
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8056 180 687 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8038 180 687 2.40.170.20
af_P76115_176_696_2.40.170.20 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7835 200 685 2.40.170.20
1kmpA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.782 187 687 2.40.170.20
3qlbB02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7789 184 687 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A4Q2X5Y9-F1-model_v4 deleted 0.9597 197 571
AF-A0A4Q2X5Y9-F1-model_v4 deleted 0.9573 197 571
AF-A0A350P8I3-F1-model_v4 TonB-dependent receptor 0.9565 129 687 GO:0009279
AF-A0A7Y3M4F8-F1-model_v4 TonB-dependent receptor 0.9272 448 687 GO:0009279
AF-A0A4R1K027-F1-model_v4 Outer membrane receptor protein involved in Fe transport 0.9216 79 687 GO:0009279
GO:0015344

Feature Viewer

pLDDT pTM Quality
84.39 0.84 High
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Predicted Structure (AlphaFold2)

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