F330317

General Info

Members Datasets Scaffolds Average Seq Length
218 149 199 446

Family's Representative Sequence

Representative Sequence 3300046516|Ga0495628_0006814|Ga0495628_0006814_3699_5222
Length 507
Sequence MPSASAAVIQAIVFTNLILTIRIKIDVNFIKFKLCIETVAAVTGFLYGGSMSDSSMKFLRAASMALQFPADALMHITVQGSGELTSAFPVADFAAEAIATAGVAVAQLLKVQSDCAPEVVVDRRLASLWFGWSIHPVGWTLPAAWDSIAGDYATRDGWIRLHTNAPHHKAAALAVLQCADDKSAVAGVVANWDAEELETAIVERKGCAAAMRTCNEWKFHPQGKAVASEPLIALSSIAASFGPSAWQPEEAGPLAGLKVLDLTRVLAGPVATRFLAGYGADVLRIDPPGWNEPALIPEVTLGKRCARLDLETQQGREIFEQLLLQADVLVHGYRPGALDQLGYTESARRAINPGLIDVSLDAYGWSGPWQGRRGFDSLVQMSSGIAHAGMQYKQADRPVPLPVQALDQATGYLMAAAVVRSLIWRITENRATTARLSLARTAQSLIDVPRTASAAEGLAASSSDFSALLEQTEWGPAKRCRSPVSVGGAALAWRRPASILGSAEPRW

Samples

Sample ID Description Type Environment
1 2124908027 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v1 Metagenome Rhizosphere
2 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
3 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
4 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
5 2511231004 Pseudomonas sp. GM102 Isolate Nodule
6 2773857670 Pseudomonas sp. 478 Isolate Unclassified
7 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
8 2784132072 Pseudomonas sp. 460 Isolate Unclassified
9 2821131069 Duganella sp. 1224 Isolate Unclassified
10 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
11 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
12 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
13 2919456309 Pseudomonas sp. 3296 Isolate Rhizosphere
14 2919476304 Duganella sp. 3397 Isolate Unclassified
15 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
16 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
17 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
18 3007619802 Pseudomonas sp. PB120 Isolate Unclassified
19 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
45 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
50 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
61 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
64 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
65 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
66 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
67 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
68 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
71 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
72 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
73 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
74 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
75 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
76 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
77 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
78 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
79 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
80 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
81 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
82 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
83 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
84 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
88 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
89 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
90 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
91 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
92 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
93 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
94 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
95 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
96 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
97 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
98 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
101 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
102 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
111 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
121 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
122 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
123 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
124 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
125 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
126 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
127 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
128 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
136 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
137 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
138 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
139 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
143 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
144 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
145 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
146 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
147 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
148 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
149 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.28
Metatranscriptomes 0
Isolates 8.72

Biome Distribution

Category Percentage (%)
Aerial Root 0.46
Bulb 0
Endosphere 4.13
Nodule 0.46
Rhizoplane 1.83
Rhizosphere 74.31
Stem 0
Stem Tuber 0
Unclassified 18.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS2a_Contig_80 2124908027 Bacteria 41608
2 Ga0055526_1000696 3300003771 Bacteria 25648
3 Ga0065165_1000161 3300005262 Bacteria 116828
4 Ga0065714_10000421 3300005288 Bacteria 4843
5 Ga0065714_10006341 3300005288 Bacteria 4629
6 Ga0065714_10069318 3300005288 Bacteria 4282
7 Ga0070669_100036069 3300005353 Bacteria 3582
8 Ga0070671_100186139 3300005355 Bacteria 1759
9 Ga0070706_100005970 3300005467 Bacteria 11519
10 Ga0068855_100216323 3300005563 Bacteria 2151
11 Ga0070664_100046969 3300005564 Bacteria 3648
12 Ga0068859_100149652 3300005617 Bacteria 2410
13 Ga0068863_100058810 3300005841 Bacteria 3637
14 Ga0068858_100001229 3300005842 Bacteria 26495
15 Ga0068862_100083997 3300005844 Bacteria 2766
16 Ga0081455_10000216 3300005937 Bacteria 73781
17 Ga0075364_10003363 3300006051 Bacteria 9077
18 Ga0075432_10012476 3300006058 Bacteria 2887
19 Ga0097620_100149652 3300006931 Bacteria 2410
20 Ga0105251_10000057 3300009011 Bacteria 104178
21 Ga0105244_10000008 3300009036 Bacteria 302297
22 Ga0105244_10059239 3300009036 Bacteria 1931
23 Ga0105250_10000283 3300009092 Bacteria 40773
24 Ga0105241_10140869 3300009174 Bacteria 1963
25 Ga0157371_10004250 3300013102 Bacteria 12594
26 Ga0157370_10006965 3300013104 Bacteria 12348
27 Ga0157370_10016668 3300013104 Bacteria 7436
28 Ga0157369_10006568 3300013105 Bacteria 13459
29 Ga0163162_10036156 3300013306 Bacteria 4921
30 Ga0163162_10311506 3300013306 Bacteria 1706
31 Ga0157375_10218596 3300013308 Bacteria 2063
32 Ga0182008_10001850 3300014497 Bacteria 13773
33 Ga0182005_1012880 3300015265 Bacteria 2357
34 Ga0163161_10020038 3300017792 Bacteria 4692
35 Ga0163161_10194740 3300017792 Bacteria 1560
36 Ga0213876_10001291 3300021384 Bacteria 15786
37 Ga0213875_10004768 3300021388 Bacteria 7377
38 Ga0209646_1000072 3300025246 Bacteria 224823
39 Ga0207696_1000112 3300025711 Bacteria 154384
40 Ga0207655_1000083 3300025728 Bacteria 213295
41 Ga0207655_1025707 3300025728 Bacteria 2851
42 Ga0207713_1000014 3300025735 Bacteria 432450
43 Ga0207713_1005460 3300025735 Bacteria 7950
44 Ga0207684_10003261 3300025910 Bacteria 15920
45 Ga0207681_10090006 3300025923 Bacteria 2189
46 Ga0207644_10051178 3300025931 Bacteria 2964
47 Ga0207679_10033797 3300025945 Bacteria 3602
48 Ga0207703_10008226 3300026035 Bacteria 8242
49 Ga0207676_10121006 3300026095 Bacteria 2208
50 Ga0307515_10105713 3300028794 Bacteria 3348
51 Ga0307513_10079016 3300031456 Bacteria 3400
52 Ga0436364_1153027 3300037853 Bacteria 22140
53 Ga0436365_0386368 3300039437 Bacteria 1662
54 Ga0436365_1820187 3300039437 Bacteria 16013
55 Ga0436362_0335426 3300039453 Bacteria 7200
56 Ga0450890_000618 3300042127 Bacteria 5191
57 Ga0450902_000432 3300042137 Bacteria 5173
58 Ga0450905_000099 3300042142 Bacteria 8479
59 Ga0450901_001130 3300042533 Bacteria 3093
60 Ga0466968_0004179 3300044735 Bacteria 5382
61 Ga0466960_0057915 3300044901 Bacteria 1891
62 Ga0495617_002785 3300046452 Bacteria 6744
63 Ga0495617_024185 3300046452 Bacteria 2050
64 Ga0495603_0012542 3300046455 Bacteria 5130
65 Ga0495603_0012987 3300046455 Bacteria 5034
66 Ga0495603_0070444 3300046455 Bacteria 2055
67 Ga0495590_0011672 3300046457 Bacteria 3281
68 Ga0495590_0045187 3300046457 Bacteria 1536
69 Ga0495591_019801 3300046458 Bacteria 2242
70 Ga0495638_0015446 3300046460 Bacteria 5125
71 Ga0495650_0012063 3300046471 Bacteria 4675
72 Ga0495650_0021087 3300046471 Bacteria 3158
73 Ga0495582_0038106 3300046473 Bacteria 2644
74 Ga0495605_0000022 3300046474 Bacteria 248321
75 Ga0495605_0010675 3300046474 Bacteria 5134
76 Ga0495605_0014142 3300046474 Bacteria 4377
77 Ga0495605_0026984 3300046474 Bacteria 2980
78 Ga0495605_0084275 3300046474 Bacteria 1482
79 Ga0495584_0003606 3300046491 Bacteria 8446
80 Ga0495584_0014276 3300046491 Bacteria 4047
81 Ga0495585_0006949 3300046492 Bacteria 6972
82 Ga0495585_0012499 3300046492 Bacteria 5001
83 Ga0495585_0034122 3300046492 Bacteria 2877
84 Ga0495585_0048523 3300046492 Bacteria 2360
85 Ga0495594_0097354 3300046499 Bacteria 1653
86 Ga0495594_0118728 3300046499 Bacteria 1494
87 Ga0495607_0000109 3300046501 Bacteria 86702
88 Ga0495607_0001972 3300046501 Bacteria 17295
89 Ga0495607_0017531 3300046501 Bacteria 4592
90 Ga0495607_0028548 3300046501 Bacteria 3442
91 Ga0495606_0005104 3300046507 Bacteria 12760
92 Ga0495616_0011272 3300046513 Bacteria 5131
93 Ga0495616_0017416 3300046513 Bacteria 3963
94 Ga0495620_0024439 3300046515 Bacteria 2873
95 Ga0495628_0006814 3300046516 Bacteria 9932
96 Ga0495630_0017164 3300046517 Bacteria 5300
97 Ga0495631_0000637 3300046518 Bacteria 22916
98 Ga0495631_0013466 3300046518 Bacteria 3969
99 Ga0495632_0003664 3300046519 Bacteria 10775
100 Ga0495632_0009971 3300046519 Bacteria 5670
101 Ga0495632_0046833 3300046519 Bacteria 2147
102 Ga0495637_0003548 3300046520 Bacteria 8268
103 Ga0495637_0008539 3300046520 Bacteria 5027
104 Ga0495643_0021642 3300046522 Bacteria 3684
105 Ga0495644_0014885 3300046523 Bacteria 2979
106 Ga0495648_0010592 3300046524 Bacteria 7010
107 Ga0495648_0039992 3300046524 Bacteria 2978
108 Ga0495648_0049200 3300046524 Bacteria 2586
109 Ga0495648_0101322 3300046524 Bacteria 1588
110 Ga0495642_0002205 3300046528 Bacteria 7983
111 Ga0495642_0009394 3300046528 Bacteria 3744
112 Ga0495654_0033434 3300046530 Bacteria 2603
113 Ga0495654_0058944 3300046530 Bacteria 1850
114 Ga0495586_0027962 3300046535 Bacteria 3017
115 Ga0495587_0009858 3300046536 Bacteria 6099
116 Ga0495609_0042241 3300046538 Bacteria 2048
117 Ga0495597_0012096 3300046542 Bacteria 4171
118 Ga0495645_0173697 3300046543 Bacteria 1481
119 Ga0495622_0008744 3300046557 Bacteria 4691
120 Ga0495622_0025817 3300046557 Bacteria 2744
121 Ga0495633_0003512 3300046558 Bacteria 10400
122 Ga0495656_0002584 3300046615 Bacteria 6036
123 Ga0495668_0000029 3300046616 Bacteria 279128
124 Ga0495634_0065891 3300046642 Bacteria 2399
125 Ga0495611_0014409 3300046648 Bacteria 3376
126 Ga0495625_0004213 3300046660 Bacteria 13703
127 Ga0495625_0023761 3300046660 Bacteria 4678
128 Ga0495625_0127997 3300046660 Bacteria 1722
129 Ga0495635_0011936 3300046663 Bacteria 6085
130 Ga0495659_0004388 3300046664 Bacteria 4440
131 Ga0495659_0009033 3300046664 Bacteria 3176
132 Ga0495661_0046097 3300046665 Bacteria 2663
133 Ga0495646_0021653 3300046680 Bacteria 4060
134 Ga0495669_0001057 3300046684 Bacteria 11475
135 Ga0495670_0003049 3300046691 Bacteria 8262
136 Ga0495670_0028460 3300046691 Bacteria 2770
137 Ga0495670_0044244 3300046691 Bacteria 2223
138 Ga0495649_0009383 3300046694 Bacteria 5821
139 Ga0495649_0045104 3300046694 Bacteria 2405
140 Ga0495589_0000710 3300046794 Bacteria 21647
141 Ga0495589_0003220 3300046794 Bacteria 8908
142 Ga0495660_0000641 3300046810 Bacteria 27196
143 Ga0495660_0027889 3300046810 Bacteria 3193
144 Ga0495660_0040315 3300046810 Bacteria 2589
145 Ga0495660_0047063 3300046810 Bacteria 2363
146 Ga0495660_0106491 3300046810 Bacteria 1436
147 Ga0495604_0064674 3300047317 Bacteria 2786
148 Ga0495636_0004524 3300047318 Bacteria 5449
149 Ga0495672_0012889 3300047320 Bacteria 5797
150 Ga0495680_0009212 3300047322 Bacteria 8900
151 Ga0495683_0001396 3300047323 Bacteria 15956
152 Ga0495675_0026364 3300047444 Bacteria 3705
153 Ga0495677_0004317 3300047445 Bacteria 5462
154 Ga0495679_023353 3300047446 Bacteria 2099
155 Ga0495685_014286 3300047447 Bacteria 2698
156 Ga0495673_0001881 3300047469 Bacteria 15755
157 Ga0495673_0012351 3300047469 Bacteria 4538
158 Ga0495673_0014331 3300047469 Bacteria 4124
159 Ga0495681_0015364 3300047470 Bacteria 4334
160 Ga0495681_0017092 3300047470 Bacteria 4041
161 Ga0495681_0030446 3300047470 Bacteria 2747
162 Ga0495686_0000048 3300047472 Bacteria 278044
163 Ga0495626_0014998 3300048091 Bacteria 3973
164 Ga0495626_0016307 3300048091 Bacteria 3776
165 Ga0496105_0144083 3300048908 Bacteria 1960
166 Ga0496109_0171819 3300048912 Bacteria 2033
167 Ga0496112_0033088 3300048915 Bacteria 5022
168 Ga0496114_0037756 3300048917 Bacteria 3996
169 Ga0496116_0015838 3300048919 Bacteria 5935
170 Ga0496116_0018902 3300048919 Bacteria 5291
171 Ga0496117_0038585 3300048920 Bacteria 3537
172 Ga0496120_0012978 3300048923 Bacteria 5636
173 Ga0496121_0000001 3300048924 Bacteria 1830318
174 Ga0496121_0082260 3300048924 Bacteria 2546
175 Ga0496121_0127959 3300048924 Bacteria 1906
176 Ga0496121_0181346 3300048924 Bacteria 1519
177 Ga0496122_0011251 3300048925 Bacteria 9091
178 Ga0496122_0059988 3300048925 Bacteria 2805
179 Ga0496122_0120475 3300048925 Bacteria 1693
180 Ga0496122_0133547 3300048925 Bacteria 1570
181 Ga0496123_0010404 3300048926 Bacteria 8223
182 Ga0496124_0020232 3300048927 Bacteria 6158
183 Ga0496124_0021268 3300048927 Bacteria 5981
184 Ga0496124_0155314 3300048927 Bacteria 1790
185 Ga0496125_0000001 3300048928 Bacteria 1766138
186 Ga0496125_0027457 3300048928 Bacteria 5158
187 Ga0496125_0056736 3300048928 Bacteria 3178
188 Ga0496126_0007846 3300048929 Bacteria 11634
189 Ga0496126_0011066 3300048929 Bacteria 9376
190 Ga0496126_0034491 3300048929 Bacteria 4753
191 Ga0496126_0150803 3300048929 Bacteria 1993
192 Ga0496126_0181920 3300048929 Bacteria 1785
193 Ga0495678_006097 3300049459 Bacteria 6484
194 nmdc:mga00v17_35130_c1 3300050491 Bacteria 2981
195 nmdc:mga00v17_66_c2 3300050491 Bacteria 30979
196 Ga0500643_037713 3300053087 Bacteria 1437
197 Ga0500644_0008473 3300053088 Bacteria 2716
198 Ga0500641_0001611 3300053096 Bacteria 8041
199 Ga0500568_0011010 3300053139 Bacteria 4212

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044735 Ga0466968_0004179 Ga0466968_0004179_3321_4697 406
2 3300039437 Ga0436365_0386368 Ga0436365_0386368_18_1283 409
3 3300039453 Ga0436362_0335426 Ga0436362_0335426_5879_7144 409
4 3300046810 Ga0495660_0106491 Ga0495660_0106491_158_1393 410
5 3300005617 Ga0068859_100149652 Ga0068859_1001496521 412
6 3300006931 Ga0097620_100149652 Ga0097620_1001496521 412
7 3300025246 Ga0209646_1000072 Ga0209646_1000072192 414
8 3300048917 Ga0496114_0037756 Ga0496114_0037756_2417_3799 415
9 3300048925 Ga0496122_0133547 Ga0496122_0133547_265_1557 415
10 3300048929 Ga0496126_0007846 Ga0496126_0007846_7503_8885 415
11 3300053088 Ga0500644_0008473 Ga0500644_0008473_791_2227 416
12 3300048912 Ga0496109_0171819 Ga0496109_0171819_195_1556 419
13 3300048915 Ga0496112_0033088 Ga0496112_0033088_2883_4244 419
14 3300021384 Ga0213876_10001291 Ga0213876_1000129111 421
15 3300039437 Ga0436365_1820187 Ga0436365_1820187_9675_11060 421
16 3300053087 Ga0500643_037713 Ga0500643_037713_113_1417 422
17 3300044901 Ga0466960_0057915 Ga0466960_0057915_61_1437 423
18 3300053139 Ga0500568_0011010 Ga0500568_0011010_1923_3281 423
19 3300005355 Ga0070671_100186139 Ga0070671_1001861392 424
20 3300025931 Ga0207644_10051178 Ga0207644_100511782 424
21 3300031456 Ga0307513_10079016 Ga0307513_100790163 425
22 3300009011 Ga0105251_10000057 Ga0105251_1000005788 426
23 3300025735 Ga0207713_1000014 Ga0207713_100001411 426
24 3300009092 Ga0105250_10000283 Ga0105250_1000028311 427
25 3300025711 Ga0207696_1000112 Ga0207696_100011256 427
26 3300028794 Ga0307515_10105713 Ga0307515_101057134 427
27 iso_pu_bacteria 2929138655 2929140289 427
28 3300005842 Ga0068858_100001229 Ga0068858_10000122922 428
29 3300026035 Ga0207703_10008226 Ga0207703_100082263 428
30 3300048919 Ga0496116_0015838 Ga0496116_0015838_2715_4040 430
31 3300048919 Ga0496116_0018902 Ga0496116_0018902_3574_4899 430
32 3300048920 Ga0496117_0038585 Ga0496117_0038585_2040_3365 430
33 3300048923 Ga0496120_0012978 Ga0496120_0012978_2574_3899 430
34 3300048924 Ga0496121_0000001 Ga0496121_0000001_1591594_1592919 430
35 3300048924 Ga0496121_0127959 Ga0496121_0127959_366_1691 430
36 3300048925 Ga0496122_0011251 Ga0496122_0011251_1464_2789 430
37 3300048925 Ga0496122_0059988 Ga0496122_0059988_65_1390 430
38 3300048925 Ga0496122_0120475 Ga0496122_0120475_47_1372 430
39 3300048926 Ga0496123_0010404 Ga0496123_0010404_1745_3070 430
40 3300048927 Ga0496124_0021268 Ga0496124_0021268_3626_4951 430
41 3300048927 Ga0496124_0155314 Ga0496124_0155314_249_1574 430
42 3300048928 Ga0496125_0000001 Ga0496125_0000001_1750294_1751619 430
43 3300048929 Ga0496126_0011066 Ga0496126_0011066_5328_6653 430
44 3300048929 Ga0496126_0034491 Ga0496126_0034491_1545_2870 430
45 3300048929 Ga0496126_0181920 Ga0496126_0181920_102_1427 430
46 3300050491 nmdc:mga00v17_35130_c1 nmdc:mga00v17_35130_c1_117_1442 430
47 3300005937 Ga0081455_10000216 Ga0081455_1000021642 431
48 3300048927 Ga0496124_0020232 Ga0496124_0020232_4171_5550 431
49 3300005841 Ga0068863_100058810 Ga0068863_1000588104 433
50 3300026095 Ga0207676_10121006 Ga0207676_101210063 433
51 iso_pu_bacteria 2821131069 2821133123 433
52 3300005844 Ga0068862_100083997 Ga0068862_1000839972 434
53 3300006051 Ga0075364_10003363 Ga0075364_100033638 435
54 3300013104 Ga0157370_10006965 Ga0157370_100069656 435
55 3300050491 nmdc:mga00v17_66_c2 nmdc:mga00v17_66_c2_16134_17474 435
56 iso_pu_bacteria 2887375801 2887376953 435
57 iso_pu_bacteria 2889306138 2889306948 435
58 3300003771 Ga0055526_1000696 Ga0055526_100069631 436
59 3300005262 Ga0065165_1000161 Ga0065165_1000161103 436
60 3300046616 Ga0495668_0000029 Ga0495668_0000029_103410_104759 436
61 iso_pu_bacteria 2510065053 2510283681 436
62 iso_pu_bacteria 2510065055 2510292484 436
63 iso_pu_bacteria 2510065058 2510311583 436
64 iso_pu_bacteria 2773857672 2774128509 436
65 iso_pu_bacteria 2974298342 2974299347 436
66 iso_pu_bacteria 2984499530 2984501688 436
67 3300053096 Ga0500641_0001611 Ga0500641_0001611_697_2064 437
68 iso_pu_bacteria 8019769354 8019773898 437
69 iso_pu_bacteria 8057798959 8057804507 437
70 3300021388 Ga0213875_10004768 Ga0213875_100047682 438
71 iso_pu_bacteria 2511231004 2511256491 438
72 iso_pu_bacteria 2773857670 2774122290 438
73 iso_pu_bacteria 2784132072 2784316128 438
74 iso_pu_bacteria 2919456309 2919459301 438
75 iso_pu_bacteria 2919476304 2919479825 438
76 iso_pu_bacteria 3007619802 3007620379 438
77 3300013102 Ga0157371_10004250 Ga0157371_100042505 439
78 3300013105 Ga0157369_10006568 Ga0157369_1000656813 439
79 3300005353 Ga0070669_100036069 Ga0070669_1000360692 440
80 3300009174 Ga0105241_10140869 Ga0105241_101408692 440
81 3300025923 Ga0207681_10090006 Ga0207681_100900062 440
82 3300046519 Ga0495632_0046833 Ga0495632_0046833_370_1746 440
83 3300048908 Ga0496105_0144083 Ga0496105_0144083_13_1395 440
84 3300005467 Ga0070706_100005970 Ga0070706_1000059707 441
85 3300005563 Ga0068855_100216323 Ga0068855_1002163232 441
86 3300005564 Ga0070664_100046969 Ga0070664_1000469692 441
87 3300009036 Ga0105244_10000008 Ga0105244_10000008234 441
88 3300013306 Ga0163162_10036156 Ga0163162_100361563 441
89 3300025728 Ga0207655_1000083 Ga0207655_100008355 441
90 3300025910 Ga0207684_10003261 Ga0207684_100032617 441
91 3300025945 Ga0207679_10033797 Ga0207679_100337972 441
92 3300046499 Ga0495594_0118728 Ga0495594_0118728_69_1394 441
93 3300046516 Ga0495628_0006814 Ga0495628_0006814_3699_5222 441
94 3300046810 Ga0495660_0000641 Ga0495660_0000641_15590_16975 441
95 3300047470 Ga0495681_0017092 Ga0495681_0017092_2102_3487 441
96 3300047472 Ga0495686_0000048 Ga0495686_0000048_270194_271663 441
97 iso_pu_bacteria 2857576091 2857576552 441
98 2124908027 MRS2a_Contig_80 MRS2a_00656170 442
99 3300005288 Ga0065714_10000421 Ga0065714_100004213 442
100 3300005288 Ga0065714_10006341 Ga0065714_100063413 442
101 3300005288 Ga0065714_10069318 Ga0065714_100693182 442
102 3300006058 Ga0075432_10012476 Ga0075432_100124761 442
103 3300009036 Ga0105244_10059239 Ga0105244_100592392 442
104 3300013104 Ga0157370_10016668 Ga0157370_100166684 442
105 3300013306 Ga0163162_10311506 Ga0163162_103115062 442
106 3300013308 Ga0157375_10218596 Ga0157375_102185962 442
107 3300014497 Ga0182008_10001850 Ga0182008_1000185010 442
108 3300015265 Ga0182005_1012880 Ga0182005_10128802 442
109 3300017792 Ga0163161_10020038 Ga0163161_100200382 442
110 3300017792 Ga0163161_10194740 Ga0163161_101947401 442
111 3300025728 Ga0207655_1025707 Ga0207655_10257073 442
112 3300025735 Ga0207713_1005460 Ga0207713_10054605 442
113 3300037853 Ga0436364_1153027 Ga0436364_1153027_6608_7972 442
114 3300042127 Ga0450890_000618 Ga0450890_000618_2979_4310 442
115 3300042137 Ga0450902_000432 Ga0450902_000432_229_1581 442
116 3300042142 Ga0450905_000099 Ga0450905_000099_4550_5902 442
117 3300042533 Ga0450901_001130 Ga0450901_001130_992_2344 442
118 3300046452 Ga0495617_002785 Ga0495617_002785_1794_3125 442
119 3300046452 Ga0495617_024185 Ga0495617_024185_106_1434 442
120 3300046455 Ga0495603_0012542 Ga0495603_0012542_2084_3412 442
121 3300046455 Ga0495603_0012987 Ga0495603_0012987_32_1363 442
122 3300046455 Ga0495603_0070444 Ga0495603_0070444_444_1775 442
123 3300046457 Ga0495590_0011672 Ga0495590_0011672_1936_3267 442
124 3300046457 Ga0495590_0045187 Ga0495590_0045187_23_1354 442
125 3300046458 Ga0495591_019801 Ga0495591_019801_51_1382 442
126 3300046460 Ga0495638_0015446 Ga0495638_0015446_3303_4634 442
127 3300046471 Ga0495650_0012063 Ga0495650_0012063_1741_3069 442
128 3300046471 Ga0495650_0021087 Ga0495650_0021087_903_2234 442
129 3300046473 Ga0495582_0038106 Ga0495582_0038106_1161_2492 442
130 3300046474 Ga0495605_0000022 Ga0495605_0000022_57216_58592 442
131 3300046474 Ga0495605_0010675 Ga0495605_0010675_3784_5115 442
132 3300046474 Ga0495605_0014142 Ga0495605_0014142_981_2312 442
133 3300046474 Ga0495605_0026984 Ga0495605_0026984_1272_2603 442
134 3300046474 Ga0495605_0084275 Ga0495605_0084275_92_1423 442
135 3300046491 Ga0495584_0003606 Ga0495584_0003606_3555_4886 442
136 3300046491 Ga0495584_0014276 Ga0495584_0014276_1108_2439 442
137 3300046492 Ga0495585_0006949 Ga0495585_0006949_773_2104 442
138 3300046492 Ga0495585_0012499 Ga0495585_0012499_2913_4241 442
139 3300046492 Ga0495585_0034122 Ga0495585_0034122_591_1922 442
140 3300046492 Ga0495585_0048523 Ga0495585_0048523_694_2025 442
141 3300046499 Ga0495594_0097354 Ga0495594_0097354_16_1347 442
142 3300046501 Ga0495607_0000109 Ga0495607_0000109_79140_80549 442
143 3300046501 Ga0495607_0001972 Ga0495607_0001972_3504_4835 442
144 3300046501 Ga0495607_0017531 Ga0495607_0017531_1153_2484 442
145 3300046501 Ga0495607_0028548 Ga0495607_0028548_781_2112 442
146 3300046507 Ga0495606_0005104 Ga0495606_0005104_1844_3175 442
147 3300046513 Ga0495616_0011272 Ga0495616_0011272_2615_3946 442
148 3300046513 Ga0495616_0017416 Ga0495616_0017416_1294_2625 442
149 3300046515 Ga0495620_0024439 Ga0495620_0024439_1390_2721 442
150 3300046517 Ga0495630_0017164 Ga0495630_0017164_244_1575 442
151 3300046518 Ga0495631_0000637 Ga0495631_0000637_4965_6296 442
152 3300046518 Ga0495631_0013466 Ga0495631_0013466_1756_3087 442
153 3300046519 Ga0495632_0003664 Ga0495632_0003664_5935_7263 442
154 3300046519 Ga0495632_0009971 Ga0495632_0009971_3016_4347 442
155 3300046520 Ga0495637_0003548 Ga0495637_0003548_4398_5726 442
156 3300046520 Ga0495637_0008539 Ga0495637_0008539_738_2069 442
157 3300046522 Ga0495643_0021642 Ga0495643_0021642_43_1374 442
158 3300046523 Ga0495644_0014885 Ga0495644_0014885_1529_2857 442
159 3300046524 Ga0495648_0010592 Ga0495648_0010592_791_2122 442
160 3300046524 Ga0495648_0039992 Ga0495648_0039992_1381_2712 442
161 3300046524 Ga0495648_0049200 Ga0495648_0049200_1163_2491 442
162 3300046524 Ga0495648_0101322 Ga0495648_0101322_26_1357 442
163 3300046528 Ga0495642_0002205 Ga0495642_0002205_4319_5647 442
164 3300046528 Ga0495642_0009394 Ga0495642_0009394_1300_2631 442
165 3300046530 Ga0495654_0033434 Ga0495654_0033434_813_2144 442
166 3300046530 Ga0495654_0058944 Ga0495654_0058944_50_1381 442
167 3300046535 Ga0495586_0027962 Ga0495586_0027962_1057_2388 442
168 3300046536 Ga0495587_0009858 Ga0495587_0009858_1313_2644 442
169 3300046538 Ga0495609_0042241 Ga0495609_0042241_528_1859 442
170 3300046542 Ga0495597_0012096 Ga0495597_0012096_709_2040 442
171 3300046543 Ga0495645_0173697 Ga0495645_0173697_24_1355 442
172 3300046557 Ga0495622_0008744 Ga0495622_0008744_1686_3017 442
173 3300046557 Ga0495622_0025817 Ga0495622_0025817_159_1490 442
174 3300046558 Ga0495633_0003512 Ga0495633_0003512_5058_6389 442
175 3300046615 Ga0495656_0002584 Ga0495656_0002584_2903_4231 442
176 3300046642 Ga0495634_0065891 Ga0495634_0065891_85_1416 442
177 3300046648 Ga0495611_0014409 Ga0495611_0014409_949_2280 442
178 3300046660 Ga0495625_0004213 Ga0495625_0004213_8732_10063 442
179 3300046660 Ga0495625_0023761 Ga0495625_0023761_25_1356 442
180 3300046660 Ga0495625_0127997 Ga0495625_0127997_319_1650 442
181 3300046663 Ga0495635_0011936 Ga0495635_0011936_1801_3132 442
182 3300046664 Ga0495659_0004388 Ga0495659_0004388_2245_3573 442
183 3300046664 Ga0495659_0009033 Ga0495659_0009033_126_1457 442
184 3300046665 Ga0495661_0046097 Ga0495661_0046097_1251_2582 442
185 3300046680 Ga0495646_0021653 Ga0495646_0021653_906_2237 442
186 3300046684 Ga0495669_0001057 Ga0495669_0001057_8985_10313 442
187 3300046691 Ga0495670_0003049 Ga0495670_0003049_5376_6707 442
188 3300046691 Ga0495670_0028460 Ga0495670_0028460_478_1809 442
189 3300046691 Ga0495670_0044244 Ga0495670_0044244_63_1394 442
190 3300046694 Ga0495649_0009383 Ga0495649_0009383_863_2194 442
191 3300046694 Ga0495649_0045104 Ga0495649_0045104_193_1524 442
192 3300046794 Ga0495589_0000710 Ga0495589_0000710_2860_4191 442
193 3300046794 Ga0495589_0003220 Ga0495589_0003220_4327_5655 442
194 3300046810 Ga0495660_0027889 Ga0495660_0027889_470_1801 442
195 3300046810 Ga0495660_0040315 Ga0495660_0040315_1142_2473 442
196 3300046810 Ga0495660_0047063 Ga0495660_0047063_962_2290 442
197 3300047317 Ga0495604_0064674 Ga0495604_0064674_894_2225 442
198 3300047318 Ga0495636_0004524 Ga0495636_0004524_1148_2479 442
199 3300047320 Ga0495672_0012889 Ga0495672_0012889_1136_2467 442
200 3300047322 Ga0495680_0009212 Ga0495680_0009212_680_2011 442
201 3300047323 Ga0495683_0001396 Ga0495683_0001396_3753_5084 442
202 3300047444 Ga0495675_0026364 Ga0495675_0026364_1090_2421 442
203 3300047445 Ga0495677_0004317 Ga0495677_0004317_1465_2793 442
204 3300047446 Ga0495679_023353 Ga0495679_023353_147_1478 442
205 3300047447 Ga0495685_014286 Ga0495685_014286_1095_2426 442
206 3300047469 Ga0495673_0001881 Ga0495673_0001881_3759_5090 442
207 3300047469 Ga0495673_0012351 Ga0495673_0012351_2656_3987 442
208 3300047469 Ga0495673_0014331 Ga0495673_0014331_1547_2878 442
209 3300047470 Ga0495681_0015364 Ga0495681_0015364_1117_2448 442
210 3300047470 Ga0495681_0030446 Ga0495681_0030446_1318_2649 442
211 3300048091 Ga0495626_0014998 Ga0495626_0014998_1341_2672 442
212 3300048091 Ga0495626_0016307 Ga0495626_0016307_761_2089 442
213 3300048924 Ga0496121_0082260 Ga0496121_0082260_156_1487 442
214 3300048924 Ga0496121_0181346 Ga0496121_0181346_97_1428 442
215 3300048928 Ga0496125_0027457 Ga0496125_0027457_127_1458 442
216 3300048928 Ga0496125_0056736 Ga0496125_0056736_1729_3057 442
217 3300048929 Ga0496126_0150803 Ga0496126_0150803_277_1641 442
218 3300049459 Ga0495678_006097 Ga0495678_006097_1540_2871 442

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

254

465

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yx6-assembly2.cif.gz_D crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.8969 193 384
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.8884 199 228
4h2n-assembly1.cif.gz_A crystal structure of mhpco, y270f mutant 0.8739 199 228
3all-assembly1.cif.gz_A crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, mutant y270a 0.8713 199 228
3alm-assembly2.cif.gz_B crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, mutant c294a 0.8711 199 228
ID Description Score Start End Superfamily
af_Q5AMS5_241_485_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9102 186 388 3.40.50.10540
af_Q9V8W3_3_464_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8957 201 228 3.50.50.60
6b4oA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8848 200 227 3.50.50.60
3gmbB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8768 199 228 3.50.50.60
af_P9WHH3_154_271_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8767 200 227 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A143GCL9-F1-model_v4 deleted 0.9862 1 442
AF-A0A143GCL9-F1-model_v4 deleted 0.984 1 442
AF-K2LSI2-F1-model_v4 Acyl-CoA transferase 0.9792 2 442 GO:0003824
AF-K2LSI2-F1-model_v4 Acyl-CoA transferase 0.9749 2 442 GO:0003824
AF-A0A2W0EGM2-F1-model_v4 Acyl-CoA transferase 0.9716 1 280 GO:0016740

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pLDDT pTM Quality
94.26 0.94 High
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Predicted Structure (AlphaFold2)

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