F330283

General Info

Members Datasets Scaffolds Average Seq Length
218 108 218 306

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0027179|Ga0466967_0027179_2396_3397
Length 333
Sequence MFRLHGLSTHLLSNQELAMTLLFILILIFAFGVAFYMLRPTKTETAVQQRLEDIQTTHAEQTGQTILKEEGYSSNAELGLLVREIPGGIYTLNLIKQSGQNWMVSSVMGISLAATILTAWITSYFVPTVALAVIAGVAAGAIPYVVLIVMREQRFRKCDALLPEAIDLMARGLRAGHALTAVLEMVGNETSEPLSTEFKKLSEEHSLGLTLRDAVMNMVDRVPRDDMRFLATAILLQKETGGNLAVILDKTAAVARERSRLRGQLKIYTAQGRITGWVLCCMPFIMFGLLSAINWHFEKLLFTEPLGRSMVYFGLGLMAVGVFVIRKIIDVKI

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
84 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
96 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
107 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
108 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.05
Rhizosphere 94.95
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100387138 3300005329 Unclassified 1333
2 Ga0070670_100072662 3300005331 Bacteria 2954
3 Ga0068869_100196929 3300005334 Bacteria 1587
4 Ga0070682_100027543 3300005337 Bacteria 3411
5 Ga0068868_100025053 3300005338 Bacteria 4531
6 Ga0070660_100019080 3300005339 Bacteria 5020
7 Ga0070661_100005190 3300005344 Bacteria 8964
8 Ga0070671_100135997 3300005355 Bacteria 2072
9 Ga0070674_100265500 3300005356 Bacteria 1354
10 Ga0070659_100008873 3300005366 Bacteria 7367
11 Ga0070659_100042968 3300005366 Bacteria 3534
12 Ga0070709_10234671 3300005434 Unclassified 1314
13 Ga0070714_100008065 3300005435 Bacteria 8211
14 Ga0070714_100009804 3300005435 Bacteria 7550
15 Ga0070714_100182512 3300005435 Bacteria 1910
16 Ga0070714_100283834 3300005435 Bacteria 1539
17 Ga0070713_100026085 3300005436 Bacteria 4582
18 Ga0070713_100055671 3300005436 Bacteria 3288
19 Ga0070713_100141368 3300005436 Bacteria 2133
20 Ga0070711_100000114 3300005439 Bacteria 42397
21 Ga0070708_100000566 3300005445 Bacteria 27717
22 Ga0070708_100001430 3300005445 Bacteria 18210
23 Ga0070708_100004097 3300005445 Bacteria 11443
24 Ga0070708_100077259 3300005445 Bacteria 3008
25 Ga0070708_100256314 3300005445 Bacteria 1644
26 Ga0070681_10089833 3300005458 Bacteria 3023
27 Ga0070681_10205060 3300005458 Bacteria 1889
28 Ga0070706_100001234 3300005467 Bacteria 27356
29 Ga0070706_100007140 3300005467 Bacteria 10506
30 Ga0070706_100106243 3300005467 Bacteria 2612
31 Ga0070706_100137242 3300005467 Bacteria 2282
32 Ga0070706_100265782 3300005467 Bacteria 1601
33 Ga0070707_100003972 3300005468 Bacteria 13928
34 Ga0070707_100007050 3300005468 Bacteria 10422
35 Ga0070707_100392871 3300005468 Bacteria 1347
36 Ga0070698_100000187 3300005471 Bacteria 58877
37 Ga0070698_100007798 3300005471 Bacteria 11583
38 Ga0070698_100081881 3300005471 Bacteria 3221
39 Ga0070698_100228442 3300005471 Bacteria 1794
40 Ga0070699_100001253 3300005518 Bacteria 23411
41 Ga0070699_100006135 3300005518 Bacteria 10511
42 Ga0070699_100018121 3300005518 Bacteria 6049
43 Ga0070699_100206103 3300005518 Bacteria 1749
44 Ga0070697_100003435 3300005536 Bacteria 12181
45 Ga0070697_100041645 3300005536 Bacteria 3718
46 Ga0070697_100178857 3300005536 Bacteria 1798
47 Ga0070697_100188409 3300005536 Bacteria 1750
48 Ga0068853_100384990 3300005539 Unclassified 1310
49 Ga0070693_100114783 3300005547 Bacteria 1662
50 Ga0068855_100032223 3300005563 Bacteria 6258
51 Ga0068855_100042427 3300005563 Bacteria 5390
52 Ga0070664_100005730 3300005564 Bacteria 10011
53 Ga0070664_100139607 3300005564 Bacteria 2133
54 Ga0068854_100110209 3300005578 Bacteria 2075
55 Ga0068854_100133610 3300005578 Bacteria 1897
56 Ga0068856_100002220 3300005614 Bacteria 20098
57 Ga0068856_100008021 3300005614 Bacteria 10308
58 Ga0068856_100012914 3300005614 Bacteria 8084
59 Ga0068856_100022859 3300005614 Bacteria 6081
60 Ga0068856_100073075 3300005614 Bacteria 3396
61 Ga0068866_10038096 3300005718 Bacteria 2365
62 Ga0068858_100111651 3300005842 Bacteria 2553
63 Ga0070717_10001129 3300006028 Bacteria 18066
64 Ga0070717_10001508 3300006028 Bacteria 16126
65 Ga0070717_10003167 3300006028 Bacteria 11750
66 Ga0070717_10005798 3300006028 Bacteria 9046
67 Ga0070717_10009007 3300006028 Bacteria 7489
68 Ga0070717_10236147 3300006028 Bacteria 1611
69 Ga0070717_10278116 3300006028 Bacteria 1484
70 Ga0070716_100023053 3300006173 Bacteria 3297
71 Ga0070716_100071665 3300006173 Bacteria 2038
72 Ga0070712_100014591 3300006175 Bacteria 5043
73 Ga0097621_100003695 3300006237 Bacteria 10587
74 Ga0097621_100018667 3300006237 Bacteria 5305
75 Ga0097621_100439183 3300006237 Unclassified 1174
76 Ga0068871_100025238 3300006358 Bacteria 4621
77 Ga0068871_100201414 3300006358 Unclassified 1719
78 Ga0075433_10134150 3300006852 Bacteria 2201
79 Ga0105240_10012975 3300009093 Bacteria 11477
80 Ga0105240_10014662 3300009093 Bacteria 10695
81 Ga0105240_10019317 3300009093 Bacteria 9107
82 Ga0105240_10071315 3300009093 Bacteria 4297
83 Ga0105240_10116071 3300009093 Bacteria 3230
84 Ga0105240_10221358 3300009093 Bacteria 2205
85 Ga0105240_10261683 3300009093 Bacteria 1995
86 Ga0105245_10007852 3300009098 Bacteria 9335
87 Ga0114129_10353781 3300009147 Bacteria 1945
88 Ga0105241_10073588 3300009174 Bacteria 2658
89 Ga0105242_10004918 3300009176 Bacteria 10345
90 Ga0105242_10194476 3300009176 Bacteria 1798
91 Ga0105248_10087130 3300009177 Bacteria 3514
92 Ga0105248_10461482 3300009177 Unclassified 1432
93 Ga0105237_10082631 3300009545 Bacteria 3203
94 Ga0105237_10153764 3300009545 Bacteria 2297
95 Ga0105238_10005821 3300009551 Bacteria 12203
96 Ga0105238_10088001 3300009551 Bacteria 3093
97 Ga0105238_10418909 3300009551 Unclassified 1334
98 Ga0099796_10008190 3300010159 Bacteria 2775
99 Ga0105239_10013286 3300010375 Bacteria 9149
100 Ga0105239_10649789 3300010375 Unclassified 1205
101 Ga0157373_10056150 3300013100 Bacteria 2796
102 Ga0157370_10491178 3300013104 Unclassified 1128
103 Ga0157369_10027384 3300013105 Bacteria 6319
104 Ga0157369_10040304 3300013105 Bacteria 5099
105 Ga0157369_10057298 3300013105 Bacteria 4204
106 Ga0157369_10138214 3300013105 Bacteria 2579
107 Ga0157369_10464089 3300013105 Bacteria 1311
108 Ga0157374_10000388 3300013296 Bacteria 40353
109 Ga0157374_10030583 3300013296 Bacteria 4891
110 Ga0157374_10105140 3300013296 Bacteria 2711
111 Ga0157374_10136729 3300013296 Bacteria 2376
112 Ga0157374_10142736 3300013296 Bacteria 2325
113 Ga0157378_10002385 3300013297 Bacteria 16683
114 Ga0157378_10014893 3300013297 Bacteria 6805
115 Ga0157378_10062871 3300013297 Bacteria 3316
116 Ga0157378_10074576 3300013297 Bacteria 3053
117 Ga0157378_10153255 3300013297 Bacteria 2149
118 Ga0163162_10034421 3300013306 Bacteria 5042
119 Ga0163162_10051511 3300013306 Bacteria 4131
120 Ga0163162_10733358 3300013306 Bacteria 1108
121 Ga0157372_10001881 3300013307 Bacteria 22752
122 Ga0157372_10002429 3300013307 Bacteria 20175
123 Ga0157372_10004122 3300013307 Bacteria 15578
124 Ga0157372_10004383 3300013307 Bacteria 15059
125 Ga0157372_10043892 3300013307 Bacteria 4952
126 Ga0157372_10091707 3300013307 Bacteria 3455
127 Ga0157372_10115516 3300013307 Bacteria 3077
128 Ga0157372_10123802 3300013307 Bacteria 2972
129 Ga0157372_10148453 3300013307 Bacteria 2704
130 Ga0157372_10166452 3300013307 Bacteria 2550
131 Ga0157372_10172801 3300013307 Bacteria 2500
132 Ga0157372_10200753 3300013307 Bacteria 2310
133 Ga0182008_10000911 3300014497 Bacteria 20576
134 Ga0157376_10085606 3300014969 Bacteria 2716
135 Ga0182006_1014082 3300015261 Bacteria 3453
136 Ga0182007_10007466 3300015262 Bacteria 4580
137 Ga0207699_10032482 3300025906 Bacteria 2941
138 Ga0207684_10001359 3300025910 Bacteria 26756
139 Ga0207684_10010199 3300025910 Bacteria 8272
140 Ga0207684_10123806 3300025910 Bacteria 2218
141 Ga0207684_10372371 3300025910 Unclassified 1229
142 Ga0207654_10159188 3300025911 Bacteria 1457
143 Ga0207707_10236676 3300025912 Bacteria 1588
144 Ga0207707_10328512 3300025912 Bacteria 1319
145 Ga0207695_10007383 3300025913 Bacteria 14022
146 Ga0207695_10008952 3300025913 Bacteria 12460
147 Ga0207695_10012167 3300025913 Bacteria 10343
148 Ga0207695_10121417 3300025913 Bacteria 2580
149 Ga0207695_10247929 3300025913 Bacteria 1681
150 Ga0207695_10298837 3300025913 Bacteria 1501
151 Ga0207671_10196873 3300025914 Bacteria 1572
152 Ga0207671_10200803 3300025914 Bacteria 1557
153 Ga0207693_10003169 3300025915 Bacteria 14130
154 Ga0207693_10153935 3300025915 Bacteria 1809
155 Ga0207663_10001017 3300025916 Unclassified 12855
156 Ga0207657_10010469 3300025919 Bacteria 9251
157 Ga0207649_10005964 3300025920 Bacteria 6611
158 Ga0207646_10001676 3300025922 Bacteria 27041
159 Ga0207646_10006609 3300025922 Bacteria 11971
160 Ga0207646_10467705 3300025922 Bacteria 1137
161 Ga0207650_10037102 3300025925 Bacteria 3550
162 Ga0207650_10291069 3300025925 Bacteria 1332
163 Ga0207687_10005827 3300025927 Bacteria 8154
164 Ga0207700_10040686 3300025928 Bacteria 3394
165 Ga0207664_10139477 3300025929 Bacteria 2049
166 Ga0207664_10201407 3300025929 Unclassified 1718
167 Ga0207664_10522845 3300025929 Bacteria 1063
168 Ga0207690_10015958 3300025932 Bacteria 4562
169 Ga0207686_10121328 3300025934 Bacteria 1780
170 Ga0207665_10008805 3300025939 Bacteria 6635
171 Ga0207665_10096924 3300025939 Unclassified 2052
172 Ga0207689_10216625 3300025942 Bacteria 1582
173 Ga0207679_10198085 3300025945 Bacteria 1676
174 Ga0207667_10094421 3300025949 Bacteria 3088
175 Ga0207667_10314626 3300025949 Bacteria 1599
176 Ga0207677_10004731 3300026023 Bacteria 7336
177 Ga0207677_10051377 3300026023 Bacteria 2795
178 Ga0207703_10065752 3300026035 Bacteria 2981
179 Ga0207639_10085038 3300026041 Bacteria 2515
180 Ga0207702_10008015 3300026078 Bacteria 8944
181 Ga0207702_10016794 3300026078 Bacteria 6058
182 Ga0207702_10104568 3300026078 Bacteria 2506
183 Ga0207702_10181734 3300026078 Bacteria 1937
184 Ga0207674_10563720 3300026116 Bacteria 1100
185 Ga0373931_0060526 3300035691 Bacteria 2039
186 Ga0373935_0159626 3300035692 Bacteria 1536
187 Ga0373937_0073651 3300036401 Bacteria 3151
188 Ga0373925_0047709 3300037068 Bacteria 3189
189 Ga0451577_0000290 3300042876 Bacteria 97706
190 Ga0451577_0083296 3300042876 Bacteria 2853
191 Ga0453683_0135999 3300044673 Unclassified 1550
192 Ga0466966_0278088 3300044684 Bacteria 1007
193 Ga0466963_0043797 3300044694 Bacteria 2945
194 Ga0453684_0000104 3300044712 Bacteria 365431
195 Ga0451576_0006148 3300045051 Bacteria 14789
196 Ga0451576_0052618 3300045051 Bacteria 4267
197 Ga0466967_0027179 3300045976 Bacteria 4757
198 Ga0466967_0151877 3300045976 Bacteria 2165
199 Ga0466967_0862413 3300045976 Unclassified 900
200 Ga0495580_0008033 3300046472 Bacteria 8425
201 Ga0495580_0269049 3300046472 Unclassified 1164
202 Ga0495623_0173242 3300046679 Unclassified 1259
203 Ga0495602_0023604 3300048088 Bacteria 5989
204 Ga0495602_0074891 3300048088 Bacteria 2875
205 Ga0496100_0200314 3300048903 Unclassified 1455
206 Ga0496102_0032269 3300048905 Bacteria 4705
207 Ga0496104_0046518 3300048907 Bacteria 4087
208 Ga0496108_0295285 3300048911 Bacteria 1411
209 Ga0496109_0070027 3300048912 Bacteria 3218
210 Ga0496110_0039096 3300048913 Bacteria 4130
211 Ga0496111_0018466 3300048914 Bacteria 4833
212 Ga0496112_0000311 3300048915 Bacteria 31365
213 Ga0496112_0038481 3300048915 Bacteria 4670
214 Ga0496112_0151117 3300048915 Bacteria 2289
215 Ga0496113_0083324 3300048916 Bacteria 2453
216 nmdc:mga0rr50_78662_c1 3300050513 Bacteria 2538
217 nmdc:mga08x19_127907_c1 3300050514 Bacteria 1707
218 nmdc:mga0a205_242985_c1 3300050515 Unclassified 1681

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_0862413 Ga0466967_0862413_34_753 239
2 3300046679 Ga0495623_0173242 Ga0495623_0173242_60_809 244
3 3300050515 nmdc:mga0a205_242985_c1 nmdc:mga0a205_242985_c1_867_1637 256
4 3300005435 Ga0070714_100283834 Ga0070714_1002838342 278
5 3300025911 Ga0207654_10159188 Ga0207654_101591882 280
6 3300035691 Ga0373931_0060526 Ga0373931_0060526_973_1923 280
7 3300005356 Ga0070674_100265500 Ga0070674_1002655002 281
8 3300006237 Ga0097621_100439183 Ga0097621_1004391832 281
9 3300009176 Ga0105242_10004918 Ga0105242_100049186 281
10 3300013297 Ga0157378_10014893 Ga0157378_100148933 281
11 3300025912 Ga0207707_10328512 Ga0207707_103285122 281
12 3300044684 Ga0466966_0278088 Ga0466966_0278088_14_880 285
13 3300025915 Ga0207693_10153935 Ga0207693_101539352 286
14 3300025939 Ga0207665_10008805 Ga0207665_100088054 286
15 3300005445 Ga0070708_100004097 Ga0070708_1000040974 287
16 3300005467 Ga0070706_100007140 Ga0070706_1000071404 287
17 3300005468 Ga0070707_100007050 Ga0070707_1000070504 287
18 3300005471 Ga0070698_100007798 Ga0070698_1000077984 287
19 3300005518 Ga0070699_100006135 Ga0070699_1000061354 287
20 3300005536 Ga0070697_100003435 Ga0070697_1000034357 287
21 3300009093 Ga0105240_10116071 Ga0105240_101160712 287
22 3300025910 Ga0207684_10010199 Ga0207684_100101996 287
23 3300025913 Ga0207695_10121417 Ga0207695_101214172 287
24 3300025922 Ga0207646_10006609 Ga0207646_100066096 287
25 3300005614 Ga0068856_100002220 Ga0068856_10000222015 289
26 3300006028 Ga0070717_10001129 Ga0070717_100011292 289
27 3300006028 Ga0070717_10005798 Ga0070717_100057985 289
28 3300013306 Ga0163162_10733358 Ga0163162_107333581 289
29 3300026078 Ga0207702_10008015 Ga0207702_100080154 289
30 3300044694 Ga0466963_0043797 Ga0466963_0043797_860_1819 289
31 3300045976 Ga0466967_0151877 Ga0466967_0151877_759_1718 289
32 3300009093 Ga0105240_10261683 Ga0105240_102616832 290
33 3300005445 Ga0070708_100077259 Ga0070708_1000772593 291
34 3300009093 Ga0105240_10071315 Ga0105240_100713154 291
35 3300009177 Ga0105248_10087130 Ga0105248_100871302 291
36 3300009545 Ga0105237_10082631 Ga0105237_100826312 291
37 3300009551 Ga0105238_10005821 Ga0105238_1000582110 291
38 3300010375 Ga0105239_10013286 Ga0105239_100132866 291
39 3300013100 Ga0157373_10056150 Ga0157373_100561501 291
40 3300013297 Ga0157378_10153255 Ga0157378_101532552 291
41 3300013307 Ga0157372_10043892 Ga0157372_100438925 291
42 3300014497 Ga0182008_10000911 Ga0182008_1000091115 291
43 3300015261 Ga0182006_1014082 Ga0182006_10140824 291
44 3300015262 Ga0182007_10007466 Ga0182007_100074665 291
45 3300042876 Ga0451577_0000290 Ga0451577_0000290_91895_92854 291
46 3300044673 Ga0453683_0135999 Ga0453683_0135999_560_1519 291
47 3300044712 Ga0453684_0000104 Ga0453684_0000104_278198_279157 291
48 3300045051 Ga0451576_0006148 Ga0451576_0006148_4655_5614 291
49 3300048903 Ga0496100_0200314 Ga0496100_0200314_204_1082 291
50 3300048905 Ga0496102_0032269 Ga0496102_0032269_471_1349 291
51 3300048907 Ga0496104_0046518 Ga0496104_0046518_2084_2962 291
52 3300048911 Ga0496108_0295285 Ga0496108_0295285_330_1208 291
53 3300048912 Ga0496109_0070027 Ga0496109_0070027_1870_2748 291
54 3300048913 Ga0496110_0039096 Ga0496110_0039096_1174_2052 291
55 3300048914 Ga0496111_0018466 Ga0496111_0018466_1382_2260 291
56 3300048915 Ga0496112_0038481 Ga0496112_0038481_1511_2389 291
57 3300048916 Ga0496113_0083324 Ga0496113_0083324_1183_2061 291
58 3300005355 Ga0070671_100135997 Ga0070671_1001359972 293
59 3300009093 Ga0105240_10014662 Ga0105240_100146622 293
60 3300013104 Ga0157370_10491178 Ga0157370_104911781 293
61 3300013105 Ga0157369_10464089 Ga0157369_104640892 293
62 3300013307 Ga0157372_10166452 Ga0157372_101664522 293
63 3300013296 Ga0157374_10136729 Ga0157374_101367293 294
64 3300005536 Ga0070697_100188409 Ga0070697_1001884092 295
65 3300005536 Ga0070697_100178857 Ga0070697_1001788572 297
66 3300005334 Ga0068869_100196929 Ga0068869_1001969292 298
67 3300005338 Ga0068868_100025053 Ga0068868_1000250532 298
68 3300005547 Ga0070693_100114783 Ga0070693_1001147832 298
69 3300005578 Ga0068854_100133610 Ga0068854_1001336102 298
70 3300005718 Ga0068866_10038096 Ga0068866_100380964 298
71 3300005842 Ga0068858_100111651 Ga0068858_1001116514 298
72 3300006237 Ga0097621_100003695 Ga0097621_1000036958 298
73 3300006358 Ga0068871_100025238 Ga0068871_1000252385 298
74 3300009098 Ga0105245_10007852 Ga0105245_100078522 298
75 3300009176 Ga0105242_10194476 Ga0105242_101944762 298
76 3300013296 Ga0157374_10105140 Ga0157374_101051402 298
77 3300013297 Ga0157378_10002385 Ga0157378_1000238512 298
78 3300013306 Ga0163162_10034421 Ga0163162_100344212 298
79 3300025927 Ga0207687_10005827 Ga0207687_100058279 298
80 3300025934 Ga0207686_10121328 Ga0207686_101213282 298
81 3300025942 Ga0207689_10216625 Ga0207689_102166252 298
82 3300026023 Ga0207677_10004731 Ga0207677_100047318 298
83 3300026035 Ga0207703_10065752 Ga0207703_100657521 298
84 3300005467 Ga0070706_100137242 Ga0070706_1001372422 300
85 3300005471 Ga0070698_100081881 Ga0070698_1000818813 300
86 3300009093 Ga0105240_10221358 Ga0105240_102213582 300
87 3300013307 Ga0157372_10004122 Ga0157372_100041222 300
88 3300025910 Ga0207684_10123806 Ga0207684_101238061 300
89 3300025913 Ga0207695_10008952 Ga0207695_100089525 300
90 3300025913 Ga0207695_10298837 Ga0207695_102988372 300
91 3300025929 Ga0207664_10522845 Ga0207664_105228451 301
92 3300006852 Ga0075433_10134150 Ga0075433_101341502 303
93 3300009147 Ga0114129_10353781 Ga0114129_103537812 303
94 3300010159 Ga0099796_10008190 Ga0099796_100081902 303
95 3300050513 nmdc:mga0rr50_78662_c1 nmdc:mga0rr50_78662_c1_911_1864 303
96 3300005467 Ga0070706_100106243 Ga0070706_1001062433 304
97 3300005518 Ga0070699_100018121 Ga0070699_1000181214 304
98 3300006028 Ga0070717_10236147 Ga0070717_102361472 304
99 3300005518 Ga0070699_100206103 Ga0070699_1002061032 305
100 3300005366 Ga0070659_100042968 Ga0070659_1000429683 306
101 3300005539 Ga0068853_100384990 Ga0068853_1003849901 306
102 3300005563 Ga0068855_100032223 Ga0068855_1000322235 306
103 3300009177 Ga0105248_10461482 Ga0105248_104614822 306
104 3300013297 Ga0157378_10062871 Ga0157378_100628714 306
105 3300013307 Ga0157372_10200753 Ga0157372_102007532 306
106 3300014969 Ga0157376_10085606 Ga0157376_100856062 306
107 3300025932 Ga0207690_10015958 Ga0207690_100159585 306
108 3300048915 Ga0496112_0000311 Ga0496112_0000311_4773_5720 306
109 3300005435 Ga0070714_100009804 Ga0070714_1000098043 307
110 3300005436 Ga0070713_100026085 Ga0070713_1000260854 307
111 3300006028 Ga0070717_10001508 Ga0070717_100015087 307
112 3300013307 Ga0157372_10172801 Ga0157372_101728012 307
113 3300026078 Ga0207702_10181734 Ga0207702_101817342 307
114 3300005468 Ga0070707_100392871 Ga0070707_1003928712 309
115 3300009093 Ga0105240_10012975 Ga0105240_100129755 310
116 3300009093 Ga0105240_10019317 Ga0105240_100193173 310
117 3300009545 Ga0105237_10153764 Ga0105237_101537643 310
118 3300009551 Ga0105238_10418909 Ga0105238_104189092 310
119 3300013105 Ga0157369_10027384 Ga0157369_100273842 310
120 3300013105 Ga0157369_10040304 Ga0157369_100403043 310
121 3300013307 Ga0157372_10001881 Ga0157372_1000188130 310
122 3300013307 Ga0157372_10002429 Ga0157372_1000242910 310
123 3300013307 Ga0157372_10004383 Ga0157372_100043839 310
124 3300035692 Ga0373935_0159626 Ga0373935_0159626_426_1367 310
125 3300048088 Ga0495602_0023604 Ga0495602_0023604_5023_5967 311
126 3300005435 Ga0070714_100008065 Ga0070714_1000080655 312
127 3300005435 Ga0070714_100182512 Ga0070714_1001825122 312
128 3300005436 Ga0070713_100055671 Ga0070713_1000556712 312
129 3300006028 Ga0070717_10003167 Ga0070717_1000316716 312
130 3300025913 Ga0207695_10007383 Ga0207695_100073837 312
131 3300025913 Ga0207695_10012167 Ga0207695_1001216711 312
132 3300025914 Ga0207671_10196873 Ga0207671_101968732 312
133 3300025928 Ga0207700_10040686 Ga0207700_100406862 312
134 3300025929 Ga0207664_10139477 Ga0207664_101394771 312
135 3300046472 Ga0495580_0008033 Ga0495580_0008033_2080_3018 312
136 3300046472 Ga0495580_0269049 Ga0495580_0269049_10_954 312
137 3300005329 Ga0070683_100387138 Ga0070683_1003871382 314
138 3300005331 Ga0070670_100072662 Ga0070670_1000726622 314
139 3300005337 Ga0070682_100027543 Ga0070682_1000275432 314
140 3300005339 Ga0070660_100019080 Ga0070660_1000190803 314
141 3300005344 Ga0070661_100005190 Ga0070661_1000051905 314
142 3300005366 Ga0070659_100008873 Ga0070659_1000088735 314
143 3300005434 Ga0070709_10234671 Ga0070709_102346712 314
144 3300005436 Ga0070713_100141368 Ga0070713_1001413682 314
145 3300005439 Ga0070711_100000114 Ga0070711_10000011424 314
146 3300005445 Ga0070708_100000566 Ga0070708_10000056612 314
147 3300005445 Ga0070708_100001430 Ga0070708_10000143011 314
148 3300005445 Ga0070708_100256314 Ga0070708_1002563142 314
149 3300005458 Ga0070681_10089833 Ga0070681_100898332 314
150 3300005458 Ga0070681_10205060 Ga0070681_102050602 314
151 3300005467 Ga0070706_100001234 Ga0070706_10000123422 314
152 3300005467 Ga0070706_100265782 Ga0070706_1002657822 314
153 3300005468 Ga0070707_100003972 Ga0070707_10000397212 314
154 3300005471 Ga0070698_100000187 Ga0070698_10000018720 314
155 3300005471 Ga0070698_100228442 Ga0070698_1002284422 314
156 3300005518 Ga0070699_100001253 Ga0070699_10000125312 314
157 3300005536 Ga0070697_100041645 Ga0070697_1000416452 314
158 3300005563 Ga0068855_100042427 Ga0068855_1000424274 314
159 3300005564 Ga0070664_100005730 Ga0070664_1000057304 314
160 3300005564 Ga0070664_100139607 Ga0070664_1001396072 314
161 3300005578 Ga0068854_100110209 Ga0068854_1001102092 314
162 3300005614 Ga0068856_100008021 Ga0068856_10000802112 314
163 3300005614 Ga0068856_100012914 Ga0068856_1000129144 314
164 3300005614 Ga0068856_100022859 Ga0068856_1000228594 314
165 3300005614 Ga0068856_100073075 Ga0068856_1000730753 314
166 3300006028 Ga0070717_10009007 Ga0070717_100090074 314
167 3300006028 Ga0070717_10278116 Ga0070717_102781162 314
168 3300006173 Ga0070716_100023053 Ga0070716_1000230531 314
169 3300006173 Ga0070716_100071665 Ga0070716_1000716652 314
170 3300006175 Ga0070712_100014591 Ga0070712_1000145913 314
171 3300006237 Ga0097621_100018667 Ga0097621_1000186674 314
172 3300006358 Ga0068871_100201414 Ga0068871_1002014142 314
173 3300009174 Ga0105241_10073588 Ga0105241_100735882 314
174 3300009551 Ga0105238_10088001 Ga0105238_100880012 314
175 3300010375 Ga0105239_10649789 Ga0105239_106497892 314
176 3300013105 Ga0157369_10057298 Ga0157369_100572986 314
177 3300013105 Ga0157369_10138214 Ga0157369_101382142 314
178 3300013296 Ga0157374_10000388 Ga0157374_1000038831 314
179 3300013296 Ga0157374_10030583 Ga0157374_100305834 314
180 3300013296 Ga0157374_10142736 Ga0157374_101427362 314
181 3300013297 Ga0157378_10074576 Ga0157378_100745762 314
182 3300013306 Ga0163162_10051511 Ga0163162_100515112 314
183 3300013307 Ga0157372_10091707 Ga0157372_100917073 314
184 3300013307 Ga0157372_10115516 Ga0157372_101155164 314
185 3300013307 Ga0157372_10123802 Ga0157372_101238022 314
186 3300013307 Ga0157372_10148453 Ga0157372_101484532 314
187 3300025906 Ga0207699_10032482 Ga0207699_100324822 314
188 3300025910 Ga0207684_10001359 Ga0207684_1000135910 314
189 3300025910 Ga0207684_10372371 Ga0207684_103723712 314
190 3300025912 Ga0207707_10236676 Ga0207707_102366762 314
191 3300025913 Ga0207695_10247929 Ga0207695_102479292 314
192 3300025914 Ga0207671_10200803 Ga0207671_102008032 314
193 3300025915 Ga0207693_10003169 Ga0207693_100031692 314
194 3300025916 Ga0207663_10001017 Ga0207663_1000101712 314
195 3300025919 Ga0207657_10010469 Ga0207657_100104699 314
196 3300025920 Ga0207649_10005964 Ga0207649_100059644 314
197 3300025922 Ga0207646_10001676 Ga0207646_100016768 314
198 3300025922 Ga0207646_10467705 Ga0207646_104677051 314
199 3300025925 Ga0207650_10037102 Ga0207650_100371024 314
200 3300025925 Ga0207650_10291069 Ga0207650_102910692 314
201 3300025929 Ga0207664_10201407 Ga0207664_102014072 314
202 3300025939 Ga0207665_10096924 Ga0207665_100969242 314
203 3300025945 Ga0207679_10198085 Ga0207679_101980852 314
204 3300025949 Ga0207667_10094421 Ga0207667_100944212 314
205 3300025949 Ga0207667_10314626 Ga0207667_103146262 314
206 3300026023 Ga0207677_10051377 Ga0207677_100513773 314
207 3300026041 Ga0207639_10085038 Ga0207639_100850382 314
208 3300026078 Ga0207702_10016794 Ga0207702_100167943 314
209 3300026078 Ga0207702_10104568 Ga0207702_101045682 314
210 3300026116 Ga0207674_10563720 Ga0207674_105637201 314
211 3300036401 Ga0373937_0073651 Ga0373937_0073651_1026_1970 314
212 3300037068 Ga0373925_0047709 Ga0373925_0047709_1058_2011 314
213 3300042876 Ga0451577_0083296 Ga0451577_0083296_63_1025 314
214 3300045051 Ga0451576_0052618 Ga0451576_0052618_1490_2452 314
215 3300045976 Ga0466967_0027179 Ga0466967_0027179_2396_3397 314
216 3300048088 Ga0495602_0074891 Ga0495602_0074891_1797_2741 314
217 3300048915 Ga0496112_0151117 Ga0496112_0151117_803_1759 314
218 3300050514 nmdc:mga08x19_127907_c1 nmdc:mga08x19_127907_c1_673_1626 314

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00482

T2SSF

Type II secretion system (T2SS), protein F

165

292

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2whn-assembly2.cif.gz_B n-terminal domain from the pilc type iv pilus biogenesis protein 0.8544 140 242
2whn-assembly1.cif.gz_A n-terminal domain from the pilc type iv pilus biogenesis protein 0.8506 140 242
5nbg-assembly1.cif.gz_B structure of the cytoplasmic domain i of outf in the d. dadantii type ii secretion system 0.8238 140 247
2vmb-assembly2.cif.gz_B the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae 0.8208 140 252
2vma-assembly1.cif.gz_A the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae 0.8095 140 252
ID Description Score Start End Superfamily
af_P36646_249_359_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.8466 140 242 1.20.81.30
af_I6Y479_96_222_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.8461 147 270 1.20.81.30
af_P41441_261_365_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.8337 144 248 1.20.81.30
af_P36646_52_165_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.8305 144 249 1.20.81.30
af_I6Y479_96_222_1.20.81.30 Mainly Alpha;Up-down Bundle;Receptor-associated Protein;Type II secretion system (T2SS), domain F 0.823 147 270 1.20.81.30
ID Description Score Start End GO Terms
AF-A0A350XTW3-F1-model_v4 VWFA domain-containing protein 0.9116 58 310 GO:0005886
AF-A0A1Q8QSQ9-F1-model_v4 Flp pilus assembly protein TadB 0.8709 110 310 GO:0005886
AF-A0A847GU78-F1-model_v4 Type II secretion system protein GspF domain-containing protein 0.8693 44 311 GO:0005886
AF-A0A1Q7FJ45-F1-model_v4 Type II secretion system protein GspF domain-containing protein 0.869 76 314 GO:0005886
AF-A0A535R8U2-F1-model_v4 Type II secretion system protein GspF domain-containing protein 0.8584 86 310 GO:0005886

Feature Viewer

pLDDT pTM Quality
77.31 0.6 Medium
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Predicted Structure (AlphaFold2)

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