F327889

General Info

Members Datasets Scaffolds Average Seq Length
216 145 432 203

Family's Representative Sequence

Representative Sequence 3300044684|Ga0466966_0283957|Ga0466966_0283957_243_848
Length 201
Sequence MALSPADFYAQAIAVADGERRLPLSRMTGWEVSPFEPDGLRVAPLRPPVVPEPAREGENCSHCGSCQRRDQGIWLDDHWRLTRMPGGVPLVLMLYPREHYDLDTLPDDRAAELGVLTAHVARHIEALPNVARAHVYRIGDGGAHLHVWFFARPEGQSQLRGSWMVVWDDLLPEYPADIADADAAAVAEALTTSYVGRAARP

Samples

Sample ID Description Type Environment
1 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
76 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
80 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
81 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
84 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
90 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
91 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
96 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
97 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
98 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
99 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
132 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
133 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
134 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
135 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
136 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
137 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
138 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
139 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
140 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
141 2902582711 Micromonospora sp. AP08 Isolate Unclassified
142 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
143 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
144 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
145 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.44
Metatranscriptomes 1.39
Isolates 4.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.24
Nodule 0.46
Rhizoplane 10.19
Rhizosphere 76.85
Stem 0
Stem Tuber 0
Unclassified 1.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466966_0283957 3300044684 Unclassified 995
2 rootH1_10050169 3300003316 Bacteria 3633
3 Ga0070658_10000278 3300005327 Bacteria 44894
4 Ga0070658_10013308 3300005327 Bacteria 6602
5 Ga0070683_100002269 3300005329 Bacteria 15231
6 Ga0068869_100182391 3300005334 Bacteria 1646
7 Ga0070680_100002813 3300005336 Bacteria 12926
8 Ga0070680_100164459 3300005336 Bacteria 1865
9 Ga0070682_100598869 3300005337 Bacteria 870
10 Ga0070660_100031362 3300005339 Bacteria 3991
11 Ga0070660_100053510 3300005339 Bacteria 3114
12 Ga0070691_10105979 3300005341 Bacteria 1401
13 Ga0070661_100379465 3300005344 Bacteria 1114
14 Ga0070661_100467141 3300005344 Bacteria 1006
15 Ga0070692_10053869 3300005345 Bacteria 2099
16 Ga0070714_100087046 3300005435 Bacteria 2731
17 Ga0070714_100094937 3300005435 Bacteria 2618
18 Ga0070711_100158939 3300005439 Bacteria 1711
19 Ga0070700_100000012 3300005441 Bacteria 171410
20 Ga0070708_100206774 3300005445 Bacteria 1839
21 Ga0070663_100032947 3300005455 Bacteria 3576
22 Ga0070681_10000019 3300005458 Bacteria 124774
23 Ga0070681_10026214 3300005458 Bacteria 5860
24 Ga0070681_10039381 3300005458 Bacteria 4738
25 Ga0070681_10617160 3300005458 Bacteria 999
26 Ga0070685_10347395 3300005466 Bacteria 1013
27 Ga0070698_100483609 3300005471 Bacteria 1175
28 Ga0070679_100000124 3300005530 Bacteria 61752
29 Ga0070679_100160238 3300005530 Bacteria 2224
30 Ga0070679_100835954 3300005530 Bacteria 864
31 Ga0070684_100047221 3300005535 Bacteria 3731
32 Ga0070684_100062251 3300005535 Bacteria 3268
33 Ga0070684_100212292 3300005535 Bacteria 1764
34 Ga0070665_101369237 3300005548 Bacteria 717
35 Ga0068855_100333786 3300005563 Bacteria 1673
36 Ga0068857_100559555 3300005577 Bacteria 1078
37 Ga0068856_100056532 3300005614 Bacteria 3872
38 Ga0068852_100008898 3300005616 Bacteria 7427
39 Ga0068852_100319343 3300005616 Bacteria 1508
40 Ga0068863_100046044 3300005841 Bacteria 4139
41 Ga0068858_100838593 3300005842 Bacteria 898
42 Ga0081455_10001225 3300005937 Bacteria 32099
43 Ga0070717_10195068 3300006028 Bacteria 1771
44 Ga0070712_100060724 3300006175 Bacteria 2667
45 Ga0070712_100116136 3300006175 Bacteria 2007
46 Ga0075431_100009549 3300006847 Bacteria 9744
47 Ga0114129_10473070 3300009147 Bacteria 1641
48 Ga0105243_10756944 3300009148 Bacteria 953
49 Ga0105242_10168001 3300009176 Bacteria 1926
50 Ga0105248_10026973 3300009177 Bacteria 6389
51 Ga0105248_10100779 3300009177 Bacteria 3255
52 Ga0105248_10522727 3300009177 Bacteria 1338
53 Ga0105237_11007983 3300009545 Bacteria 840
54 Ga0105239_11959074 3300010375 Bacteria 680
55 Ga0157370_10237504 3300013104 Bacteria 1687
56 Ga0157369_10005309 3300013105 Bacteria 15018
57 Ga0157369_10059604 3300013105 Bacteria 4116
58 Ga0163162_10354179 3300013306 Bacteria 1600
59 Ga0157372_10140709 3300013307 Bacteria 2779
60 Ga0157372_10404852 3300013307 Bacteria 1590
61 Ga0157372_11674075 3300013307 Unclassified 732
62 Ga0157375_10066185 3300013308 Bacteria 3606
63 Ga0157375_11302551 3300013308 Bacteria 854
64 Ga0157375_11873544 3300013308 Bacteria 712
65 Ga0163163_10018814 3300014325 Bacteria 6476
66 Ga0163163_10020057 3300014325 Bacteria 6291
67 Ga0157379_10684665 3300014968 Bacteria 962
68 Ga0206353_11344976 3300020082 Bacteria 1327
69 Ga0206353_11960376 3300020082 Bacteria 688
70 Ga0213876_10001463 3300021384 Bacteria 14701
71 Ga0213876_10506308 3300021384 Bacteria 642
72 Ga0224712_10077554 3300022467 Bacteria 1364
73 Ga0207647_10017883 3300025904 Bacteria 4810
74 Ga0207699_10053721 3300025906 Bacteria 2390
75 Ga0207705_10000590 3300025909 Bacteria 30474
76 Ga0207705_10065985 3300025909 Bacteria 2617
77 Ga0207654_10339415 3300025911 Bacteria 1032
78 Ga0207707_10000046 3300025912 Bacteria 119404
79 Ga0207707_10012412 3300025912 Bacteria 7405
80 Ga0207707_10013176 3300025912 Bacteria 7207
81 Ga0207707_10350021 3300025912 Bacteria 1273
82 Ga0207707_10375554 3300025912 Bacteria 1223
83 Ga0207695_10446774 3300025913 Bacteria 1176
84 Ga0207693_10041281 3300025915 Bacteria 3632
85 Ga0207663_10217222 3300025916 Bacteria 1389
86 Ga0207660_10002591 3300025917 Bacteria 11856
87 Ga0207660_10368063 3300025917 Bacteria 1154
88 Ga0207657_10051309 3300025919 Bacteria 3586
89 Ga0207657_10056856 3300025919 Bacteria 3373
90 Ga0207649_10271273 3300025920 Bacteria 1230
91 Ga0207649_10302444 3300025920 Bacteria 1170
92 Ga0207652_10000476 3300025921 Bacteria 41111
93 Ga0207652_10064692 3300025921 Bacteria 3165
94 Ga0207652_10284067 3300025921 Bacteria 1493
95 Ga0207687_10081839 3300025927 Bacteria 2334
96 Ga0207700_10008007 3300025928 Bacteria 6513
97 Ga0207700_10689666 3300025928 Bacteria 911
98 Ga0207664_10008098 3300025929 Bacteria 7312
99 Ga0207664_10029961 3300025929 Bacteria 4151
100 Ga0207664_10160398 3300025929 Bacteria 1918
101 Ga0207686_10414783 3300025934 Bacteria 1029
102 Ga0207711_10013161 3300025941 Bacteria 6871
103 Ga0207711_10018588 3300025941 Bacteria 5778
104 Ga0207711_10636301 3300025941 Bacteria 995
105 Ga0207661_10001278 3300025944 Bacteria 16823
106 Ga0207661_10010182 3300025944 Bacteria 6761
107 Ga0207679_10168594 3300025945 Bacteria 1800
108 Ga0207667_10315971 3300025949 Bacteria 1595
109 Ga0207640_10954475 3300025981 Bacteria 752
110 Ga0207703_10729514 3300026035 Bacteria 943
111 Ga0207678_10112016 3300026067 Bacteria 2328
112 Ga0207702_10028678 3300026078 Bacteria 4627
113 Ga0207702_10368533 3300026078 Bacteria 1378
114 Ga0207641_10016771 3300026088 Bacteria 5999
115 Ga0207698_10003317 3300026142 Bacteria 9680
116 Ga0265334_10105610 3300028573 Bacteria 1016
117 Ga0307517_10071005 3300028786 Bacteria 3128
118 Ga0307515_10010604 3300028794 Bacteria 17639
119 Ga0265338_10028800 3300028800 Bacteria 5528
120 Ga0265320_10062949 3300031240 Bacteria 1765
121 Ga0265325_10010748 3300031241 Bacteria 5283
122 Ga0265340_10018802 3300031247 Bacteria 3561
123 Ga0307513_10003151 3300031456 Bacteria 22534
124 Ga0265342_10090399 3300031712 Bacteria 1756
125 Ga0307516_10002365 3300031730 Bacteria 25285
126 Ga0307516_10134377 3300031730 Bacteria 2250
127 Ga0307413_10434102 3300031824 Bacteria 1038
128 Ga0307409_100104962 3300031995 Bacteria 2355
129 Ga0307409_100742376 3300031995 Bacteria 985
130 Ga0307416_100641190 3300032002 Bacteria 1146
131 Ga0307415_100297708 3300032126 Bacteria 1335
132 Ga0307415_100360232 3300032126 Bacteria 1228
133 Ga0307415_100434014 3300032126 Bacteria 1131
134 Ga0373926_0002312 3300035083 Bacteria 6026
135 Ga0373953_0031026 3300035117 Bacteria 2077
136 Ga0373942_0001096 3300035207 Bacteria 7231
137 Ga0373935_0000114 3300035692 Bacteria 36901
138 Ga0373947_0000261 3300035725 Bacteria 29877
139 Ga0395905_0149072 3300037471 Bacteria 2201
140 Ga0436365_0204965 3300039437 Bacteria 14697
141 Ga0436365_1146899 3300039437 Bacteria 1912
142 Ga0451795_1277085 3300041456 Bacteria 1194
143 Ga0451802_0213385 3300041460 Bacteria 952
144 Ga0451833_0127720 3300041491 Bacteria 781
145 Ga0451843_1241084 3300041509 Bacteria 845
146 Ga0466961_0001843 3300044693 Bacteria 13162
147 Ga0466961_0173585 3300044693 Bacteria 1340
148 Ga0466961_0176462 3300044693 Bacteria 1327
149 Ga0466961_0255891 3300044693 Bacteria 1074
150 Ga0466961_0286366 3300044693 Bacteria 1008
151 Ga0466963_0100950 3300044694 Bacteria 1975
152 Ga0466963_0144951 3300044694 Bacteria 1647
153 Ga0466963_0345147 3300044694 Bacteria 1048
154 Ga0466963_0589725 3300044694 Unclassified 785
155 Ga0466970_0165983 3300044765 Bacteria 1222
156 Ga0466970_0186781 3300044765 Bacteria 1151
157 Ga0466957_0221020 3300044842 Bacteria 1251
158 Ga0466959_0085357 3300045049 Bacteria 2272
159 Ga0466959_0108423 3300045049 Bacteria 1984
160 Ga0466959_0176725 3300045049 Unclassified 1495
161 Ga0466958_0145959 3300045836 Bacteria 1491
162 Ga0466967_0164862 3300045976 Bacteria 2082
163 Ga0495638_0123099 3300046460 Bacteria 1531
164 Ga0495640_0031366 3300046533 Bacteria 3793
165 Ga0495613_0155578 3300046689 Bacteria 1629
166 Ga0495613_0618708 3300046689 Bacteria 719
167 Ga0495604_0094678 3300047317 Bacteria 2207
168 Ga0495604_0585705 3300047317 Bacteria 717
169 Ga0495674_0395731 3300047319 Bacteria 1116
170 Ga0495676_0254043 3300047321 Bacteria 1198
171 Ga0495676_0261586 3300047321 Bacteria 1177
172 Ga0496104_0497964 3300048907 Bacteria 1129
173 Ga0496105_0073615 3300048908 Bacteria 2822
174 Ga0496105_0142557 3300048908 Bacteria 1972
175 Ga0496108_0000086 3300048911 Bacteria 100279
176 Ga0496108_0070681 3300048911 Bacteria 2946
177 Ga0496108_0657338 3300048911 Bacteria 911
178 Ga0496109_0008217 3300048912 Bacteria 8857
179 Ga0496109_0029872 3300048912 Bacteria 4884
180 Ga0496109_0154993 3300048912 Bacteria 2145
181 Ga0496110_0062653 3300048913 Bacteria 3285
182 Ga0496111_0077850 3300048914 Bacteria 2418
183 Ga0496111_0275103 3300048914 Bacteria 1249
184 Ga0496111_0281936 3300048914 Bacteria 1232
185 Ga0496112_0080570 3300048915 Bacteria 3219
186 Ga0496112_0081065 3300048915 Bacteria 3209
187 Ga0496112_0140528 3300048915 Bacteria 2384
188 Ga0496113_0006730 3300048916 Bacteria 7323
189 Ga0496113_0119070 3300048916 Bacteria 2063
190 Ga0496114_0203046 3300048917 Bacteria 1736
191 Ga0496115_0070767 3300048918 Bacteria 2828
192 Ga0496118_0292622 3300048921 Bacteria 899
193 Ga0496126_0269274 3300048929 Bacteria 1414
194 Ga0496126_0363563 3300048929 Bacteria 1181
195 Ga0501032_0371329 3300049569 Bacteria 920
196 Ga0501070_0125632 3300049586 Bacteria 2120
197 Ga0501035_0038499 3300049822 Bacteria 4329
198 Ga0501044_0501888 3300049823 Bacteria 1114
199 nmdc:mga0qj67_334472_c1 3300050509 Bacteria 1225
200 nmdc:mga06r32_77073_c1 3300050510 Bacteria 3238
201 Ga0500644_0036457 3300053088 Bacteria 1601
202 Ga0500646_0000134 3300053090 Bacteria 21323
203 Ga0500583_0021229 3300053092 Bacteria 2697
204 Ga0500583_0125947 3300053092 Bacteria 1269
205 Ga0500573_0048285 3300053140 Bacteria 2450
206 Ga0500588_0013727 3300053146 Bacteria 2037
207 Ga0500616_0009587 3300053153 Bacteria 5876
208 2819739681 2818991472 Bacteria 10089953
209 2867314736 2867312974 Bacteria 7058875
210 2867322249 2867319477 Bacteria 7069771
211 2880492801 2880489317 Bacteria 7096270
212 2902585297 2902582711 Bacteria 6187705
213 2996227418 2996221748 Bacteria 6799777
214 8001790187 8001781756 Bacteria 9586736
215 8003874958 8003870546 Bacteria 7396674
216 8055417971 8055412473 Bacteria 6257500
217 Ga0466966_0283957
218 rootH1_10050169
219 Ga0070658_10000278
220 Ga0070658_10013308
221 Ga0070683_100002269
222 Ga0068869_100182391
223 Ga0070680_100002813
224 Ga0070680_100164459
225 Ga0070682_100598869
226 Ga0070660_100031362
227 Ga0070660_100053510
228 Ga0070691_10105979
229 Ga0070661_100379465
230 Ga0070661_100467141
231 Ga0070692_10053869
232 Ga0070714_100087046
233 Ga0070714_100094937
234 Ga0070711_100158939
235 Ga0070700_100000012
236 Ga0070708_100206774
237 Ga0070663_100032947
238 Ga0070681_10000019
239 Ga0070681_10026214
240 Ga0070681_10039381
241 Ga0070681_10617160
242 Ga0070685_10347395
243 Ga0070698_100483609
244 Ga0070679_100000124
245 Ga0070679_100160238
246 Ga0070679_100835954
247 Ga0070684_100047221
248 Ga0070684_100062251
249 Ga0070684_100212292
250 Ga0070665_101369237
251 Ga0068855_100333786
252 Ga0068857_100559555
253 Ga0068856_100056532
254 Ga0068852_100008898
255 Ga0068852_100319343
256 Ga0068863_100046044
257 Ga0068858_100838593
258 Ga0081455_10001225
259 Ga0070717_10195068
260 Ga0070712_100060724
261 Ga0070712_100116136
262 Ga0075431_100009549
263 Ga0114129_10473070
264 Ga0105243_10756944
265 Ga0105242_10168001
266 Ga0105248_10026973
267 Ga0105248_10100779
268 Ga0105248_10522727
269 Ga0105237_11007983
270 Ga0105239_11959074
271 Ga0157370_10237504
272 Ga0157369_10005309
273 Ga0157369_10059604
274 Ga0163162_10354179
275 Ga0157372_10140709
276 Ga0157372_10404852
277 Ga0157372_11674075
278 Ga0157375_10066185
279 Ga0157375_11302551
280 Ga0157375_11873544
281 Ga0163163_10018814
282 Ga0163163_10020057
283 Ga0157379_10684665
284 Ga0206353_11344976
285 Ga0206353_11960376
286 Ga0213876_10001463
287 Ga0213876_10506308
288 Ga0224712_10077554
289 Ga0207647_10017883
290 Ga0207699_10053721
291 Ga0207705_10000590
292 Ga0207705_10065985
293 Ga0207654_10339415
294 Ga0207707_10000046
295 Ga0207707_10012412
296 Ga0207707_10013176
297 Ga0207707_10350021
298 Ga0207707_10375554
299 Ga0207695_10446774
300 Ga0207693_10041281
301 Ga0207663_10217222
302 Ga0207660_10002591
303 Ga0207660_10368063
304 Ga0207657_10051309
305 Ga0207657_10056856
306 Ga0207649_10271273
307 Ga0207649_10302444
308 Ga0207652_10000476
309 Ga0207652_10064692
310 Ga0207652_10284067
311 Ga0207687_10081839
312 Ga0207700_10008007
313 Ga0207700_10689666
314 Ga0207664_10008098
315 Ga0207664_10029961
316 Ga0207664_10160398
317 Ga0207686_10414783
318 Ga0207711_10013161
319 Ga0207711_10018588
320 Ga0207711_10636301
321 Ga0207661_10001278
322 Ga0207661_10010182
323 Ga0207679_10168594
324 Ga0207667_10315971
325 Ga0207640_10954475
326 Ga0207703_10729514
327 Ga0207678_10112016
328 Ga0207702_10028678
329 Ga0207702_10368533
330 Ga0207641_10016771
331 Ga0207698_10003317
332 Ga0265334_10105610
333 Ga0307517_10071005
334 Ga0307515_10010604
335 Ga0265338_10028800
336 Ga0265320_10062949
337 Ga0265325_10010748
338 Ga0265340_10018802
339 Ga0307513_10003151
340 Ga0265342_10090399
341 Ga0307516_10002365
342 Ga0307516_10134377
343 Ga0307413_10434102
344 Ga0307409_100104962
345 Ga0307409_100742376
346 Ga0307416_100641190
347 Ga0307415_100297708
348 Ga0307415_100360232
349 Ga0307415_100434014
350 Ga0373926_0002312
351 Ga0373953_0031026
352 Ga0373942_0001096
353 Ga0373935_0000114
354 Ga0373947_0000261
355 Ga0395905_0149072
356 Ga0436365_0204965
357 Ga0436365_1146899
358 Ga0451795_1277085
359 Ga0451802_0213385
360 Ga0451833_0127720
361 Ga0451843_1241084
362 Ga0466961_0001843
363 Ga0466961_0173585
364 Ga0466961_0176462
365 Ga0466961_0255891
366 Ga0466961_0286366
367 Ga0466963_0100950
368 Ga0466963_0144951
369 Ga0466963_0345147
370 Ga0466963_0589725
371 Ga0466970_0165983
372 Ga0466970_0186781
373 Ga0466957_0221020
374 Ga0466959_0085357
375 Ga0466959_0108423
376 Ga0466959_0176725
377 Ga0466958_0145959
378 Ga0466967_0164862
379 Ga0495638_0123099
380 Ga0495640_0031366
381 Ga0495613_0155578
382 Ga0495613_0618708
383 Ga0495604_0094678
384 Ga0495604_0585705
385 Ga0495674_0395731
386 Ga0495676_0254043
387 Ga0495676_0261586
388 Ga0496104_0497964
389 Ga0496105_0073615
390 Ga0496105_0142557
391 Ga0496108_0000086
392 Ga0496108_0070681
393 Ga0496108_0657338
394 Ga0496109_0008217
395 Ga0496109_0029872
396 Ga0496109_0154993
397 Ga0496110_0062653
398 Ga0496111_0077850
399 Ga0496111_0275103
400 Ga0496111_0281936
401 Ga0496112_0080570
402 Ga0496112_0081065
403 Ga0496112_0140528
404 Ga0496113_0006730
405 Ga0496113_0119070
406 Ga0496114_0203046
407 Ga0496115_0070767
408 Ga0496118_0292622
409 Ga0496126_0269274
410 Ga0496126_0363563
411 Ga0501032_0371329
412 Ga0501070_0125632
413 Ga0501035_0038499
414 Ga0501044_0501888
415 nmdc:mga0qj67_334472_c1
416 nmdc:mga06r32_77073_c1
417 Ga0500644_0036457
418 Ga0500646_0000134
419 Ga0500583_0021229
420 Ga0500583_0125947
421 Ga0500573_0048285
422 Ga0500588_0013727
423 Ga0500616_0009587
424 2819739681
425 2867314736
426 2867322249
427 2880492801
428 2902585297
429 2996227418
430 8001790187
431 8003874958
432 8055417971

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i24-assembly1.cif.gz_B crystal structure of a hit family hydrolase protein from vibrio fischeri. northeast structural genomics consortium target id vfr176 0.7366 64 199
4oyc-assembly1.cif.gz_A crystal structure of the prgk periplasmic domain 2 0.7335 103 137
2oik-assembly2.cif.gz_D crystal structure of a histidine triad (hit) protein (mfla_2506) from methylobacillus flagellatus kt at 1.65 a resolution 0.7255 62 191
4egu-assembly1.cif.gz_B 0.95a resolution structure of a histidine triad protein from clostridium difficile 0.7167 62 152
3i24-assembly1.cif.gz_B crystal structure of a hit family hydrolase protein from vibrio fischeri. northeast structural genomics consortium target id vfr176 0.7143 64 199
ID Description Score Start End Superfamily
af_Q7KVU5_528_609_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.8097 118 137 3.30.300.30
af_Q09909_385_541_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.7591 70 155 3.30.428.10
af_A0A140LH01_2_105_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.7587 73 157 3.30.428.10
af_Q84WU9_374_481_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.752 75 156 3.30.428.10
3auoB03 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.7421 110 138 3.30.460.10
ID Description Score Start End GO Terms
AF-A0A3L8R047-F1-model_v4 HIT domain-containing protein 0.9146 89 205
AF-A0A0F0H567-F1-model_v4 Uncharacterized protein 0.9089 61 170
AF-A0A0Q9RH92-F1-model_v4 HIT domain-containing protein 0.9083 73 191
AF-A0A0F0HMF0-F1-model_v4 Diadenosine tetraphosphate hydrolase 0.9051 73 200
AF-A0A3S3T7A5-F1-model_v4 deleted 0.8971 76 207

Map