F327346

General Info

Members Datasets Scaffolds Average Seq Length
216 162 216 480

Family's Representative Sequence

Representative Sequence 3300005459|Ga0068867_100001857|Ga0068867_10000185711
Length 513
Sequence MAEQFSFSLGALIIVLSVGAATSISVLRFFGSVADALSHNGVLTRQLKNKLAAVDGGGPENILILGSDKRANLAEDPGRSDTTILLRLDPERDAIAVMSIPRDLKVEIPGYGTEKFNAAYTYGGPKLTLQVVKELTGLQINHVVNVDFLGFVRAVDAIGCVYTDVDRRYYHSNVGVPPSEQYSEINIKPGYQLLCGKKALQYVRYRHTDTDIVRAARQQDFLSAARQRVPIKDLLLGQNKLIDIFTEYTSSDINSTSTMIQVMDLFVESRNAAIKEVHFPAELGPSFVYASPEAIHEAVEKFLGIEASAGPRGTLDEGHDKSAGGARHKHGHKQHIAKPKPPGNDGLVPAGESGESEAKAVARKVSAGFPVFYPSRLPSGAYYQEDNSYEHIQNPRVYHLRDTDEGRHGAYRMVLEWPLSDGVHYFGVQGIQGWSDPPILDNPSVTEEINGREYEIYTDGGRITLIAWHRGESSYWVSNDLLNTLTNDQMVGIARSAKLRIPHEKRRKGRADG

Samples

Sample ID Description Type Environment
1 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
82 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
83 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
84 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
85 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
94 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
157 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
158 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
159 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
160 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
162 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 10.19
Rhizosphere 83.8
Stem 0
Stem Tuber 0
Unclassified 6.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000467 3300001977 Bacteria 6038
2 JGI24748J21848_1000493 3300002074 Bacteria 4346
3 JGI24034J26672_10000270 3300002239 Bacteria 6846
4 JGI25407J50210_10003028 3300003373 Bacteria 4016
5 Ga0070683_100017754 3300005329 Bacteria 6286
6 Ga0070677_10008340 3300005333 Bacteria 3483
7 Ga0070680_100011928 3300005336 Bacteria 6742
8 Ga0070691_10002285 3300005341 Bacteria 8488
9 Ga0070674_100000008 3300005356 Bacteria 143844
10 Ga0070674_100000082 3300005356 Bacteria 44418
11 Ga0070667_100017880 3300005367 Bacteria 5876
12 Ga0070663_100000733 3300005455 Bacteria 17691
13 Ga0070662_100000016 3300005457 Bacteria 105820
14 Ga0068867_100001857 3300005459 Bacteria 14683
15 Ga0070679_100000312 3300005530 Bacteria 41159
16 Ga0070679_100001032 3300005530 Bacteria 24307
17 Ga0070684_100017734 3300005535 Bacteria 5851
18 Ga0070665_100000244 3300005548 Bacteria 90284
19 Ga0070665_100132882 3300005548 Bacteria 2490
20 Ga0068855_100280856 3300005563 Bacteria 1849
21 Ga0068854_100000031 3300005578 Bacteria 107298
22 Ga0068854_100029607 3300005578 Bacteria 3792
23 Ga0068856_100043294 3300005614 Bacteria 4430
24 Ga0068864_100000045 3300005618 Bacteria 154739
25 Ga0068866_10000001 3300005718 Bacteria 519680
26 Ga0068866_10007339 3300005718 Bacteria 4616
27 Ga0068858_100000267 3300005842 Bacteria 55818
28 Ga0068858_100001207 3300005842 Bacteria 26780
29 Ga0068860_100011347 3300005843 Bacteria 8779
30 Ga0081538_10000011 3300005981 Bacteria 154554
31 Ga0081538_10005512 3300005981 Bacteria 11371
32 Ga0081538_10006849 3300005981 Bacteria 9932
33 Ga0081538_10015760 3300005981 Bacteria 5834
34 Ga0081538_10029086 3300005981 Bacteria 3784
35 Ga0081538_10047413 3300005981 Bacteria 2635
36 Ga0070715_10000001 3300006163 Bacteria 693690
37 Ga0075428_100209805 3300006844 Bacteria 2105
38 Ga0075430_100000305 3300006846 Bacteria 34764
39 Ga0075431_100014255 3300006847 Bacteria 8038
40 Ga0075433_10000339 3300006852 Bacteria 29053
41 Ga0075429_100066681 3300006880 Bacteria 3134
42 Ga0068865_100008312 3300006881 Bacteria 6410
43 Ga0105245_10000016 3300009098 Bacteria 204372
44 Ga0105245_10006117 3300009098 Bacteria 10584
45 Ga0105245_10011455 3300009098 Bacteria 7723
46 Ga0114129_10195474 3300009147 Bacteria 2743
47 Ga0105243_10077360 3300009148 Bacteria 2706
48 Ga0105242_10011158 3300009176 Bacteria 6905
49 Ga0105242_10038717 3300009176 Bacteria 3835
50 Ga0105238_10000011 3300009551 Bacteria 261080
51 Ga0105249_10000068 3300009553 Bacteria 148594
52 Ga0105239_10032945 3300010375 Bacteria 5693
53 Ga0157371_10008951 3300013102 Bacteria 7921
54 Ga0157370_10032579 3300013104 Bacteria 5088
55 Ga0157370_10033524 3300013104 Bacteria 5006
56 Ga0157374_10027456 3300013296 Bacteria 5136
57 Ga0157372_10000409 3300013307 Bacteria 47021
58 Ga0157375_10000367 3300013308 Bacteria 41173
59 Ga0157376_10051741 3300014969 Bacteria 3412
60 Ga0163161_10000032 3300017792 Bacteria 165511
61 Ga0207682_10000206 3300025893 Bacteria 26843
62 Ga0207642_10000006 3300025899 Bacteria 230268
63 Ga0207642_10000007 3300025899 Bacteria 226017
64 Ga0207642_10000222 3300025899 Bacteria 16787
65 Ga0207685_10000011 3300025905 Bacteria 213430
66 Ga0207660_10015371 3300025917 Bacteria 5050
67 Ga0207652_10000483 3300025921 Bacteria 40881
68 Ga0207652_10004210 3300025921 Bacteria 11747
69 Ga0207694_10000004 3300025924 Bacteria 967075
70 Ga0207687_10000018 3300025927 Bacteria 236159
71 Ga0207687_10042944 3300025927 Bacteria 3113
72 Ga0207706_10000068 3300025933 Bacteria 105795
73 Ga0207686_10006611 3300025934 Bacteria 6249
74 Ga0207709_10025319 3300025935 Bacteria 3396
75 Ga0207669_10000004 3300025937 Bacteria 196828
76 Ga0207669_10000012 3300025937 Bacteria 138242
77 Ga0207704_10000190 3300025938 Bacteria 32246
78 Ga0207661_10018192 3300025944 Bacteria 5220
79 Ga0207712_10000007 3300025961 Bacteria 539589
80 Ga0207640_10000015 3300025981 Bacteria 215411
81 Ga0207640_10047564 3300025981 Bacteria 2768
82 Ga0207658_10011141 3300025986 Bacteria 6123
83 Ga0207677_10000372 3300026023 Bacteria 31162
84 Ga0207703_10000040 3300026035 Bacteria 168191
85 Ga0207703_10000322 3300026035 Bacteria 52048
86 Ga0207639_10004255 3300026041 Bacteria 9652
87 Ga0207678_10000834 3300026067 Bacteria 28248
88 Ga0207702_10011070 3300026078 Bacteria 7530
89 Ga0207648_10004376 3300026089 Bacteria 14522
90 Ga0207676_10000016 3300026095 Bacteria 311561
91 Ga0268266_10000020 3300028379 Bacteria 527065
92 Ga0268266_10000085 3300028379 Bacteria 201288
93 Ga0268266_10077652 3300028379 Bacteria 2887
94 Ga0268264_10005606 3300028381 Bacteria 10637
95 Ga0307413_10055915 3300031824 Bacteria 2404
96 Ga0307410_10105800 3300031852 Bacteria 2026
97 Ga0307409_100032252 3300031995 Bacteria 3795
98 Ga0307416_100008087 3300032002 Bacteria 6746
99 Ga0307415_100120613 3300032126 Bacteria 1965
100 Ga0439440_0030672 3300042993 Bacteria 1267
101 Ga0466963_0000023 3300044694 Bacteria 52546
102 Ga0466967_0000027 3300045976 Bacteria 64265
103 Ga0495592_0000036 3300046454 Bacteria 125461
104 Ga0495629_0049558 3300046459 Bacteria 2943
105 Ga0495641_0024985 3300046461 Bacteria 2938
106 Ga0495653_0039594 3300046463 Bacteria 3691
107 Ga0495653_0050331 3300046463 Bacteria 3205
108 Ga0495582_0000029 3300046473 Bacteria 77919
109 Ga0495608_0000031 3300046511 Bacteria 145255
110 Ga0495608_0014951 3300046511 Bacteria 5386
111 Ga0495620_0000210 3300046515 Bacteria 44013
112 Ga0495628_0029624 3300046516 Bacteria 4436
113 Ga0495630_0039187 3300046517 Unclassified 3544
114 Ga0495652_0000019 3300046529 Bacteria 190248
115 Ga0495652_0051512 3300046529 Bacteria 3515
116 Ga0495587_0035783 3300046536 Bacteria 2990
117 Ga0495645_0010791 3300046543 Bacteria 6418
118 Ga0495656_0000241 3300046615 Bacteria 19365
119 Ga0495635_0000016 3300046663 Bacteria 214088
120 Ga0495657_0000024 3300046675 Bacteria 145255
121 Ga0495599_0006252 3300046678 Bacteria 7178
122 Ga0495658_0000026 3300046683 Bacteria 77681
123 Ga0495669_0000260 3300046684 Bacteria 30549
124 Ga0495613_0000073 3300046689 Bacteria 98688
125 Ga0495600_0097608 3300046809 Bacteria 1915
126 Ga0495604_0000019 3300047317 Bacteria 175064
127 Ga0495604_0014177 3300047317 Bacteria 6354
128 Ga0495672_0027919 3300047320 Bacteria 3579
129 Ga0495676_0001652 3300047321 Bacteria 19468
130 Ga0495680_0000061 3300047322 Bacteria 90676
131 Ga0495680_0087710 3300047322 Unclassified 2340
132 Ga0495675_0000428 3300047444 Bacteria 28143
133 Ga0495685_015952 3300047447 Bacteria 2566
134 Ga0495593_0005209 3300047673 Bacteria 7685
135 Ga0495602_0001790 3300048088 Bacteria 21477
136 Ga0496100_0000002 3300048903 Bacteria 489057
137 Ga0496101_0000001 3300048904 Bacteria 489057
138 Ga0496104_0000009 3300048907 Bacteria 488055
139 Ga0496105_0000027 3300048908 Bacteria 148197
140 Ga0496105_0007116 3300048908 Bacteria 8631
141 Ga0496105_0057797 3300048908 Bacteria 3202
142 Ga0496106_0000149 3300048909 Bacteria 51656
143 Ga0496106_0000955 3300048909 Bacteria 21074
144 Ga0496107_0000013 3300048910 Bacteria 178284
145 Ga0496107_0007531 3300048910 Bacteria 7513
146 Ga0496108_0000001 3300048911 Bacteria 919044
147 Ga0496108_0000132 3300048911 Bacteria 73888
148 Ga0496108_0008881 3300048911 Bacteria 8146
149 Ga0496109_0000003 3300048912 Bacteria 420862
150 Ga0496109_0000007 3300048912 Bacteria 247554
151 Ga0496109_0009763 3300048912 Bacteria 8191
152 Ga0496110_0004281 3300048913 Bacteria 11045
153 Ga0496110_0007855 3300048913 Bacteria 8546
154 Ga0496110_0027983 3300048913 Bacteria 4837
155 Ga0496111_0005935 3300048914 Bacteria 7879
156 Ga0496112_0000003 3300048915 Bacteria 660147
157 Ga0496113_0000029 3300048916 Bacteria 61873
158 Ga0496116_0001188 3300048919 Bacteria 30564
159 Ga0496117_0011901 3300048920 Bacteria 7737
160 Ga0496118_0005186 3300048921 Bacteria 14915
161 Ga0496119_0017636 3300048922 Bacteria 5362
162 Ga0496119_0023138 3300048922 Bacteria 4421
163 Ga0496119_0024543 3300048922 Bacteria 4237
164 Ga0496120_0007077 3300048923 Bacteria 8420
165 Ga0496121_0096934 3300048924 Unclassified 2287
166 Ga0496124_0055887 3300048927 Bacteria 3333
167 Ga0496125_0046798 3300048928 Bacteria 3625
168 Ga0496125_0073776 3300048928 Bacteria 2650
169 Ga0496126_0012897 3300048929 Bacteria 8535
170 Ga0496126_0029057 3300048929 Bacteria 5256
171 Ga0501031_0000434 3300049568 Bacteria 24055
172 Ga0501032_0000899 3300049569 Bacteria 24104
173 Ga0501033_0001140 3300049570 Bacteria 24003
174 Ga0501034_0031533 3300049571 Bacteria 5383
175 Ga0501036_0001260 3300049572 Bacteria 19408
176 Ga0501037_0000774 3300049573 Bacteria 24049
177 Ga0501038_0001146 3300049574 Bacteria 24003
178 Ga0501039_0028236 3300049575 Bacteria 4318
179 Ga0501040_0010301 3300049576 Bacteria 6114
180 Ga0501041_0049056 3300049577 Bacteria 2572
181 Ga0501043_0001082 3300049579 Bacteria 23968
182 Ga0501046_0000447 3300049580 Bacteria 41432
183 Ga0501047_0001335 3300049581 Bacteria 24206
184 Ga0501048_0000734 3300049582 Bacteria 24021
185 Ga0501048_0028939 3300049582 Bacteria 4021
186 Ga0501070_0001137 3300049586 Bacteria 23887
187 Ga0501071_0066700 3300049587 Bacteria 2616
188 Ga0501072_0022773 3300049588 Bacteria 4862
189 Ga0501072_0059510 3300049588 Bacteria 3012
190 Ga0501073_0002868 3300049589 Bacteria 12910
191 Ga0501074_0006442 3300049590 Bacteria 8477
192 Ga0501079_0030745 3300049741 Bacteria 4126
193 Ga0501079_0036721 3300049741 Bacteria 3774
194 Ga0501080_0050659 3300049742 Bacteria 3864
195 Ga0501083_0004605 3300049744 Bacteria 9743
196 Ga0501035_0002398 3300049822 Bacteria 18377
197 Ga0501044_0003241 3300049823 Bacteria 18299
198 Ga0501044_0082858 3300049823 Bacteria 3244
199 nmdc:mga05p37_411050_c1 3300050507 Bacteria 1577
200 nmdc:mga0qj67_2616_c1 3300050509 Bacteria 12905
201 nmdc:mga06r32_8940_c1 3300050510 Bacteria 9028
202 nmdc:mga0a205_11_c1 3300050515 Bacteria 121735
203 Ga0495601_0000039 3300053077 Bacteria 79594
204 Ga0495601_0003202 3300053077 Bacteria 9364
205 Ga0495612_0000098 3300053078 Bacteria 37601
206 Ga0495612_0001743 3300053078 Bacteria 8910
207 Ga0495655_0027058 3300053083 Unclassified 1357
208 Ga0495595_0000014 3300053084 Bacteria 145255
209 Ga0495595_0000278 3300053084 Bacteria 20258
210 Ga0495619_0000021 3300053085 Bacteria 187095
211 Ga0495619_0000147 3300053085 Bacteria 51947
212 Ga0495619_0000534 3300053085 Bacteria 25127
213 Ga0495619_0001794 3300053085 Bacteria 14259
214 Ga0495619_0067553 3300053085 Unclassified 2387
215 Ga0501082_0006800 3300060353 Bacteria 9882
216 Ga0530510_0044848 3300061734 Bacteria 3196

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053083 Ga0495655_0027058 Ga0495655_0027058_166_1338 376
2 3300042993 Ga0439440_0030672 Ga0439440_0030672_52_1242 381
3 3300050510 nmdc:mga06r32_8940_c1 nmdc:mga06r32_8940_c1_11_1282 390
4 3300048911 Ga0496108_0000132 Ga0496108_0000132_38597_40264 414
5 3300048912 Ga0496109_0000007 Ga0496109_0000007_145431_147098 414
6 3300005981 Ga0081538_10047413 Ga0081538_100474132 427
7 3300006846 Ga0075430_100000305 Ga0075430_1000003052 427
8 3300006847 Ga0075431_100014255 Ga0075431_1000142555 427
9 3300006880 Ga0075429_100066681 Ga0075429_1000666812 427
10 3300009147 Ga0114129_10195474 Ga0114129_101954742 427
11 3300032126 Ga0307415_100120613 Ga0307415_1001206132 427
12 3300050509 nmdc:mga0qj67_2616_c1 nmdc:mga0qj67_2616_c1_8332_9807 427
13 3300050507 nmdc:mga05p37_411050_c1 nmdc:mga05p37_411050_c1_19_1443 429
14 3300005981 Ga0081538_10005512 Ga0081538_100055122 433
15 3300005981 Ga0081538_10006849 Ga0081538_100068494 433
16 3300006844 Ga0075428_100209805 Ga0075428_1002098052 434
17 3300031824 Ga0307413_10055915 Ga0307413_100559152 434
18 3300031852 Ga0307410_10105800 Ga0307410_101058002 434
19 3300031995 Ga0307409_100032252 Ga0307409_1000322522 434
20 3300032002 Ga0307416_100008087 Ga0307416_1000080874 434
21 3300005981 Ga0081538_10029086 Ga0081538_100290863 436
22 3300048929 Ga0496126_0012897 Ga0496126_0012897_5014_6669 436
23 3300003373 JGI25407J50210_10003028 JGI25407J50210_100030283 437
24 3300005981 Ga0081538_10015760 Ga0081538_100157602 438
25 3300005981 Ga0081538_10000011 Ga0081538_1000001120 439
26 3300047320 Ga0495672_0027919 Ga0495672_0027919_821_2266 439
27 3300049577 Ga0501041_0049056 Ga0501041_0049056_717_2189 439
28 3300049588 Ga0501072_0059510 Ga0501072_0059510_1137_2609 439
29 3300061734 Ga0530510_0044848 Ga0530510_0044848_270_1742 439
30 3300048915 Ga0496112_0000003 Ga0496112_0000003_143756_145375 450
31 3300048922 Ga0496119_0024543 Ga0496119_0024543_1542_3206 457
32 3300048923 Ga0496120_0007077 Ga0496120_0007077_5155_6819 457
33 3300048928 Ga0496125_0046798 Ga0496125_0046798_1035_2702 457
34 3300048929 Ga0496126_0029057 Ga0496126_0029057_1711_3315 457
35 3300047673 Ga0495593_0005209 Ga0495593_0005209_5066_6730 458
36 3300049582 Ga0501048_0028939 Ga0501048_0028939_1126_2775 458
37 3300049587 Ga0501071_0066700 Ga0501071_0066700_158_1807 458
38 3300049741 Ga0501079_0030745 Ga0501079_0030745_1379_3028 458
39 3300049823 Ga0501044_0082858 Ga0501044_0082858_957_2606 458
40 3300005455 Ga0070663_100000733 Ga0070663_1000007338 459
41 3300005530 Ga0070679_100001032 Ga0070679_1000010329 459
42 3300025921 Ga0207652_10004210 Ga0207652_100042102 459
43 3300026067 Ga0207678_10000834 Ga0207678_100008348 459
44 3300046461 Ga0495641_0024985 Ga0495641_0024985_839_2446 459
45 3300049568 Ga0501031_0000434 Ga0501031_0000434_11042_12715 459
46 3300049569 Ga0501032_0000899 Ga0501032_0000899_11379_13052 459
47 3300049570 Ga0501033_0001140 Ga0501033_0001140_11388_13061 459
48 3300049571 Ga0501034_0031533 Ga0501034_0031533_2019_3692 459
49 3300049572 Ga0501036_0001260 Ga0501036_0001260_11391_13064 459
50 3300049573 Ga0501037_0000774 Ga0501037_0000774_10849_12522 459
51 3300049574 Ga0501038_0001146 Ga0501038_0001146_10957_12630 459
52 3300049575 Ga0501039_0028236 Ga0501039_0028236_1337_3010 459
53 3300049576 Ga0501040_0010301 Ga0501040_0010301_323_1996 459
54 3300049579 Ga0501043_0001082 Ga0501043_0001082_11377_13050 459
55 3300049580 Ga0501046_0000447 Ga0501046_0000447_11375_13048 459
56 3300049581 Ga0501047_0001335 Ga0501047_0001335_11535_13208 459
57 3300049582 Ga0501048_0000734 Ga0501048_0000734_11361_13034 459
58 3300049586 Ga0501070_0001137 Ga0501070_0001137_11366_13039 459
59 3300049588 Ga0501072_0022773 Ga0501072_0022773_1171_2844 459
60 3300049589 Ga0501073_0002868 Ga0501073_0002868_5332_7005 459
61 3300049590 Ga0501074_0006442 Ga0501074_0006442_346_2019 459
62 3300049741 Ga0501079_0036721 Ga0501079_0036721_115_1788 459
63 3300049742 Ga0501080_0050659 Ga0501080_0050659_2131_3804 459
64 3300049744 Ga0501083_0004605 Ga0501083_0004605_2797_4470 459
65 3300049822 Ga0501035_0002398 Ga0501035_0002398_10947_12620 459
66 3300049823 Ga0501044_0003241 Ga0501044_0003241_10891_12564 459
67 3300060353 Ga0501082_0006800 Ga0501082_0006800_6823_8496 459
68 3300005548 Ga0070665_100132882 Ga0070665_1001328822 460
69 3300028379 Ga0268266_10077652 Ga0268266_100776522 460
70 3300046689 Ga0495613_0000073 Ga0495613_0000073_21219_22877 460
71 3300053077 Ga0495601_0000039 Ga0495601_0000039_10542_12200 460
72 3300005367 Ga0070667_100017880 Ga0070667_1000178804 461
73 3300025986 Ga0207658_10011141 Ga0207658_100111413 461
74 3300028379 Ga0268266_10000085 Ga0268266_1000008583 461
75 3300048922 Ga0496119_0017636 Ga0496119_0017636_2500_4164 461
76 3300048927 Ga0496124_0055887 Ga0496124_0055887_471_2159 461
77 3300048928 Ga0496125_0073776 Ga0496125_0073776_114_1778 461
78 3300006881 Ga0068865_100008312 Ga0068865_1000083122 462
79 3300014969 Ga0157376_10051741 Ga0157376_100517412 462
80 3300025938 Ga0207704_10000190 Ga0207704_100001902 462
81 3300045976 Ga0466967_0000027 Ga0466967_0000027_35183_36835 462
82 3300048908 Ga0496105_0007116 Ga0496105_0007116_5118_6737 462
83 3300048919 Ga0496116_0001188 Ga0496116_0001188_11194_12843 462
84 3300048922 Ga0496119_0023138 Ga0496119_0023138_1536_3185 462
85 3300013102 Ga0157371_10008951 Ga0157371_100089512 463
86 3300013104 Ga0157370_10032579 Ga0157370_100325794 463
87 3300046511 Ga0495608_0000031 Ga0495608_0000031_125977_127626 463
88 3300046675 Ga0495657_0000024 Ga0495657_0000024_125977_127626 463
89 3300047444 Ga0495675_0000428 Ga0495675_0000428_17630_19279 463
90 3300048924 Ga0496121_0096934 Ga0496121_0096934_143_1795 463
91 3300053084 Ga0495595_0000014 Ga0495595_0000014_17630_19279 463
92 3300053085 Ga0495619_0000147 Ga0495619_0000147_17630_19279 463
93 3300005614 Ga0068856_100043294 Ga0068856_1000432944 464
94 3300009551 Ga0105238_10000011 Ga0105238_100000116 464
95 3300025924 Ga0207694_10000004 Ga0207694_10000004615 464
96 3300026078 Ga0207702_10011070 Ga0207702_100110705 464
97 3300005329 Ga0070683_100017754 Ga0070683_1000177545 465
98 3300005535 Ga0070684_100017734 Ga0070684_1000177342 465
99 3300010375 Ga0105239_10032945 Ga0105239_100329452 465
100 3300025944 Ga0207661_10018192 Ga0207661_100181925 465
101 3300046459 Ga0495629_0049558 Ga0495629_0049558_352_1968 465
102 3300048913 Ga0496110_0007855 Ga0496110_0007855_4390_6057 465
103 3300048914 Ga0496111_0005935 Ga0496111_0005935_4522_6189 465
104 3300053078 Ga0495612_0001743 Ga0495612_0001743_6948_8561 465
105 3300005341 Ga0070691_10002285 Ga0070691_100022854 466
106 3300005548 Ga0070665_100000244 Ga0070665_10000024457 466
107 3300005578 Ga0068854_100000031 Ga0068854_10000003177 466
108 3300005842 Ga0068858_100001207 Ga0068858_1000012078 466
109 3300009098 Ga0105245_10006117 Ga0105245_100061178 466
110 3300013307 Ga0157372_10000409 Ga0157372_100004096 466
111 3300025981 Ga0207640_10000015 Ga0207640_10000015139 466
112 3300026035 Ga0207703_10000322 Ga0207703_1000032259 466
113 3300026041 Ga0207639_10004255 Ga0207639_100042558 466
114 3300028379 Ga0268266_10000020 Ga0268266_1000002055 466
115 3300046517 Ga0495630_0039187 Ga0495630_0039187_1608_3221 466
116 3300046529 Ga0495652_0051512 Ga0495652_0051512_1516_3126 466
117 3300046543 Ga0495645_0010791 Ga0495645_0010791_739_2349 466
118 3300046678 Ga0495599_0006252 Ga0495599_0006252_4207_5820 466
119 3300048916 Ga0496113_0000029 Ga0496113_0000029_54193_55851 466
120 3300047317 Ga0495604_0000019 Ga0495604_0000019_47977_49587 467
121 3300047321 Ga0495676_0001652 Ga0495676_0001652_6729_8345 467
122 3300005842 Ga0068858_100000267 Ga0068858_10000026753 468
123 3300006163 Ga0070715_10000001 Ga0070715_10000001189 468
124 3300009176 Ga0105242_10038717 Ga0105242_100387173 468
125 3300025905 Ga0207685_10000011 Ga0207685_10000011189 468
126 3300025934 Ga0207686_10006611 Ga0207686_100066113 468
127 3300026035 Ga0207703_10000040 Ga0207703_1000004097 468
128 3300046511 Ga0495608_0014951 Ga0495608_0014951_2580_4211 468
129 3300046516 Ga0495628_0029624 Ga0495628_0029624_1653_3287 468
130 3300002074 JGI24748J21848_1000493 JGI24748J21848_10004932 469
131 3300002239 JGI24034J26672_10000270 JGI24034J26672_100002705 469
132 3300005336 Ga0070680_100011928 Ga0070680_1000119282 469
133 3300005530 Ga0070679_100000312 Ga0070679_1000003126 469
134 3300013104 Ga0157370_10033524 Ga0157370_100335242 469
135 3300013296 Ga0157374_10027456 Ga0157374_100274566 469
136 3300025917 Ga0207660_10015371 Ga0207660_100153714 469
137 3300025921 Ga0207652_10000483 Ga0207652_100004836 469
138 3300046529 Ga0495652_0000019 Ga0495652_0000019_118000_119658 469
139 3300053077 Ga0495601_0003202 Ga0495601_0003202_1960_3576 469
140 3300053085 Ga0495619_0000021 Ga0495619_0000021_109297_110916 469
141 3300005563 Ga0068855_100280856 Ga0068855_1002808562 470
142 3300005843 Ga0068860_100011347 Ga0068860_1000113475 470
143 3300006852 Ga0075433_10000339 Ga0075433_1000033910 470
144 3300009098 Ga0105245_10011455 Ga0105245_100114552 470
145 3300013308 Ga0157375_10000367 Ga0157375_100003677 470
146 3300025927 Ga0207687_10042944 Ga0207687_100429442 470
147 3300026023 Ga0207677_10000372 Ga0207677_1000037226 470
148 3300028381 Ga0268264_10005606 Ga0268264_100056068 470
149 3300046463 Ga0495653_0039594 Ga0495653_0039594_242_1870 470
150 3300048909 Ga0496106_0000149 Ga0496106_0000149_39572_41188 470
151 3300048910 Ga0496107_0007531 Ga0496107_0007531_2389_4005 470
152 3300048911 Ga0496108_0008881 Ga0496108_0008881_3288_4919 470
153 3300048912 Ga0496109_0009763 Ga0496109_0009763_3331_4962 470
154 3300050515 nmdc:mga0a205_11_c1 nmdc:mga0a205_11_c1_48891_50531 470
155 3300053078 Ga0495612_0000098 Ga0495612_0000098_30023_31636 470
156 3300005356 Ga0070674_100000082 Ga0070674_10000008231 471
157 3300005718 Ga0068866_10000001 Ga0068866_10000001215 471
158 3300025899 Ga0207642_10000006 Ga0207642_10000006218 471
159 3300025899 Ga0207642_10000007 Ga0207642_1000000718 471
160 3300025937 Ga0207669_10000012 Ga0207669_1000001235 471
161 3300044694 Ga0466963_0000023 Ga0466963_0000023_39149_40762 471
162 3300046473 Ga0495582_0000029 Ga0495582_0000029_43308_44921 471
163 3300046536 Ga0495587_0035783 Ga0495587_0035783_1186_2799 471
164 3300046663 Ga0495635_0000016 Ga0495635_0000016_46345_47952 471
165 3300046683 Ga0495658_0000026 Ga0495658_0000026_33022_34635 471
166 3300047322 Ga0495680_0000061 Ga0495680_0000061_83881_85494 471
167 3300053085 Ga0495619_0001794 Ga0495619_0001794_662_2275 471
168 3300005356 Ga0070674_100000008 Ga0070674_100000008115 472
169 3300005457 Ga0070662_100000016 Ga0070662_10000001653 472
170 3300005459 Ga0068867_100001857 Ga0068867_10000185711 472
171 3300005578 Ga0068854_100029607 Ga0068854_1000296072 472
172 3300005718 Ga0068866_10007339 Ga0068866_100073394 472
173 3300009148 Ga0105243_10077360 Ga0105243_100773602 472
174 3300009176 Ga0105242_10011158 Ga0105242_100111585 472
175 3300017792 Ga0163161_10000032 Ga0163161_10000032105 472
176 3300025899 Ga0207642_10000222 Ga0207642_100002227 472
177 3300025933 Ga0207706_10000068 Ga0207706_1000006853 472
178 3300025935 Ga0207709_10025319 Ga0207709_100253192 472
179 3300025937 Ga0207669_10000004 Ga0207669_1000000491 472
180 3300025981 Ga0207640_10047564 Ga0207640_100475642 472
181 3300026089 Ga0207648_10004376 Ga0207648_100043768 472
182 3300046454 Ga0495592_0000036 Ga0495592_0000036_44447_46063 472
183 3300046463 Ga0495653_0050331 Ga0495653_0050331_1156_2769 472
184 3300046515 Ga0495620_0000210 Ga0495620_0000210_42085_43710 472
185 3300046615 Ga0495656_0000241 Ga0495656_0000241_12056_13696 472
186 3300046809 Ga0495600_0097608 Ga0495600_0097608_266_1894 472
187 3300047317 Ga0495604_0014177 Ga0495604_0014177_3856_5484 472
188 3300047322 Ga0495680_0087710 Ga0495680_0087710_589_2217 472
189 3300048088 Ga0495602_0001790 Ga0495602_0001790_4710_6359 472
190 3300048908 Ga0496105_0057797 Ga0496105_0057797_892_2562 472
191 3300048913 Ga0496110_0004281 Ga0496110_0004281_8263_9885 472
192 3300053084 Ga0495595_0000278 Ga0495595_0000278_3353_4966 472
193 3300053085 Ga0495619_0000534 Ga0495619_0000534_14946_16544 472
194 3300053085 Ga0495619_0067553 Ga0495619_0067553_115_1743 472
195 3300005333 Ga0070677_10008340 Ga0070677_100083402 473
196 3300009098 Ga0105245_10000016 Ga0105245_10000016160 473
197 3300009553 Ga0105249_10000068 Ga0105249_1000006846 473
198 3300025893 Ga0207682_10000206 Ga0207682_1000020622 473
199 3300025927 Ga0207687_10000018 Ga0207687_1000001864 473
200 3300025961 Ga0207712_10000007 Ga0207712_10000007198 473
201 3300046684 Ga0495669_0000260 Ga0495669_0000260_11412_13043 473
202 3300047447 Ga0495685_015952 Ga0495685_015952_587_2203 473
203 3300048903 Ga0496100_0000002 Ga0496100_0000002_190642_192273 473
204 3300048904 Ga0496101_0000001 Ga0496101_0000001_190642_192273 473
205 3300048907 Ga0496104_0000009 Ga0496104_0000009_17732_19360 473
206 3300048908 Ga0496105_0000027 Ga0496105_0000027_129165_130793 473
207 3300048909 Ga0496106_0000955 Ga0496106_0000955_13959_15590 473
208 3300048910 Ga0496107_0000013 Ga0496107_0000013_18364_19995 473
209 3300048911 Ga0496108_0000001 Ga0496108_0000001_482638_484245 473
210 3300048912 Ga0496109_0000003 Ga0496109_0000003_157184_158791 473
211 3300048913 Ga0496110_0027983 Ga0496110_0027983_2838_4454 473
212 3300048920 Ga0496117_0011901 Ga0496117_0011901_5828_7489 473
213 3300048921 Ga0496118_0005186 Ga0496118_0005186_460_2121 473
214 3300001977 JGI24746J21847_1000467 JGI24746J21847_10004673 474
215 3300005618 Ga0068864_100000045 Ga0068864_10000004529 474
216 3300026095 Ga0207676_10000016 Ga0207676_10000016134 474

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03816

LytR_cpsA_psr

LytR_cpsA_psr family

79

230

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4obm-assembly1.cif.gz_A crystal structure of a putative transcription regulator (eubsir_01389) from eubacterium siraeum dsm 15702 at 2.15 a resolution 0.8151 37 285
4de9-assembly1.cif.gz_A lytr-cps2a-psr family protein ywtf (tagt) with bound octaprenyl pyrophosphate lipid 0.7948 38 285
3qfi-assembly1.cif.gz_A x-ray crystal structure of transcriptional regulator (ef0465) from enterococcus faecalis, northeast structural genomics consortium target efr190 0.7857 40 284
3tfl-assembly1.cif.gz_A lytr-cps2a-psr family protein with bound octaprenyl pyrophosphate lipid 0.7849 36 285
3mej-assembly1.cif.gz_A crystal structure of putative transcriptional regulator ywtf from bacillus subtilis, northeast structural genomics consortium target sr736 0.7835 38 285
ID Description Score Start End Superfamily
4de9A01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.9307 38 127 3.30.420.590
af_P52078_42_333_3.40.630.190 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.8082 38 284 3.40.630.190
4obmA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.7984 37 285 3.40.630.190
af_Q7BHL7_76_327_3.40.630.190 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.7883 37 287 3.40.630.190
3qfiA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;LCP protein 0.7857 40 284 3.40.630.190
ID Description Score Start End GO Terms
AF-A0A0B0IA79-F1-model_v4 deleted 0.8343 37 256
AF-A0A538CR26-F1-model_v4 LytR family transcriptional regulator 0.8301 1 460 GO:0016020
AF-A0A538A8U9-F1-model_v4 Cell envelope-related transcriptional attenuator domain-containing protein 0.8286 172 460
AF-A0A4R5KNK2-F1-model_v4 Cell envelope-related transcriptional attenuator domain-containing protein 0.8232 37 285
AF-A0A847CRD2-F1-model_v4 LCP family protein 0.8221 40 285

Feature Viewer

pLDDT pTM Quality
75.3 0.76 High
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Predicted Structure (AlphaFold2)

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