F326781

General Info

Members Datasets Scaffolds Average Seq Length
215 153 187 727

Family's Representative Sequence

Representative Sequence 3300046457|Ga0495590_0004099|Ga0495590_0004099_2393_4789
Length 792
Sequence MRRSPENAAGMLLANCWCNVSEHAMRDTPLSGDATRIVPMNESFFEPGRNCATVRHVDRFSLLIDGSDYFRVLREAITRAERTVFILGWDIDSRMKLTPEGSDDGFPEALGDFLHAVAAKKRRLRIYILAWDFAMLYAFEREWLPVFKMGWRMHRRIAFEMDGKHPLGGSQHQKIVVIDDRLAFVGGLDLTRSRWDTQKHQADDPLRRDANGTRYQPFHDVHSMFDGEAAREIGMLARERWARACNRKLAIRAHRVPLTQDAWPPSRSVDLENVDIAISLTEPAYMGRDSTQQIRTQYLDAIARARRSIYIENQYFTSGPIGAALSESLAREDGPELTIVVPRDQSGWLQEVTMGVLRARLHNILKDADKHGRYRLLSPDVPGLGEAIVNVHSKLMIVDGELLIVGSANLNNRSMVLDSECNVSIDAGADARIRRAIATMRDTLLAEHLGCEVTDIVCERDARGSLNAAIEALQHDREKHRTLVDLDPQVSPELDQLIPPDALIDPETPLAADELVNQFVPAERARPLIGRYALLGVLALLVVGLAAVWHWTPLANYVNLKSLTNATRQIEALPLAPLWIVLCYVAAAVVSAPVTLLIATMGIVFGAAWGGLYAFIGTTVAAAASFWIGNRLGRDTVRKLAGARVNRLSERVAKRGIVAVVVLRLLPVAPFAIVNLVAGASHIRMRDFMIGTMLGMGPGIFLTVAFAHQLVASLRRPTAGSFAVLIGIGSLLLQRFLGGSHNSDVHEGAPGDADKPRASDEAERAQRLRERSGMPRDASGQTSSRRPDEVRS

Samples

Sample ID Description Type Environment
1 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
2 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
3 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
4 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
5 2519103095 Burkholderia sp. KJ006 Isolate Nodule
6 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
7 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
8 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
9 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
10 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
11 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
12 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
13 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
14 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
15 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
16 2904564687 Burkholderia sp. 571 Isolate Unclassified
17 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
18 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
19 2928163908 Burkholderia sp. 567 Isolate Unclassified
20 2928536128 Burkholderia sola 565 Isolate Unclassified
21 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
22 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
23 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
24 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
25 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
26 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
27 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
28 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
29 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
48 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
70 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
71 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
72 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
73 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
76 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
77 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
78 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
85 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
86 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
87 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
88 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
89 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
93 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
103 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
112 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
113 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
114 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
115 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
116 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
121 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
134 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
143 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
144 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
145 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
146 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
147 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
148 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
149 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
150 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
151 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
152 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
153 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.58
Metatranscriptomes 0.93
Isolates 13.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.37
Nodule 2.79
Rhizoplane 4.65
Rhizosphere 76.28
Stem 0
Stem Tuber 0
Unclassified 7.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000287 3300002067 Bacteria 17546
2 JGI24735J21928_10001573 3300002067 Bacteria 8095
3 rootH1_10004925 3300003316 Bacteria 12287
4 rootH1_10004925 3300003323 Bacteria 10403
5 Ga0055532_1000319 3300003758 Bacteria 28295
6 Ga0055527_1000311 3300003760 Bacteria 26355
7 Ga0055535_1000089 3300003761 Bacteria 102200
8 Ga0055542_1000121 3300003762 Bacteria 102200
9 Ga0055529_1000141 3300003763 Bacteria 102200
10 Ga0055528_1005234 3300003790 Bacteria 6092
11 Ga0070658_10021022 3300005327 Bacteria 5228
12 Ga0070658_10035643 3300005327 Bacteria 4008
13 Ga0070660_100000029 3300005339 Bacteria 88220
14 Ga0070660_100000545 3300005339 Bacteria 25282
15 Ga0070660_100002836 3300005339 Bacteria 11931
16 Ga0070673_100028232 3300005364 Bacteria 4170
17 Ga0070659_100000006 3300005366 Bacteria 229954
18 Ga0070659_100000772 3300005366 Bacteria 23233
19 Ga0070667_100010672 3300005367 Bacteria 7589
20 Ga0070662_100000439 3300005457 Bacteria 24616
21 Ga0068855_100070132 3300005563 Bacteria 4078
22 Ga0105251_10000854 3300009011 Bacteria 27299
23 Ga0105240_10003454 3300009093 Bacteria 24514
24 Ga0105240_10007303 3300009093 Bacteria 16081
25 Ga0111539_10019063 3300009094 Bacteria 8478
26 Ga0105239_10002310 3300010375 Bacteria 24350
27 Ga0105239_10011021 3300010375 Bacteria 10091
28 Ga0157371_10001169 3300013102 Bacteria 28175
29 Ga0157371_10019197 3300013102 Bacteria 5045
30 Ga0157370_10000384 3300013104 Bacteria 55593
31 Ga0157370_10010873 3300013104 Bacteria 9559
32 Ga0157369_10000278 3300013105 Bacteria 68926
33 Ga0157369_10000884 3300013105 Bacteria 38185
34 Ga0157369_10001104 3300013105 Bacteria 33795
35 Ga0157374_10000077 3300013296 Bacteria 97269
36 Ga0157372_10003724 3300013307 Bacteria 16378
37 Ga0157375_10012793 3300013308 Bacteria 7451
38 Ga0182007_10000341 3300015262 Bacteria 29669
39 Ga0206356_11270277 3300020070 Bacteria 3928
40 Ga0224712_10001189 3300022467 Bacteria 5844
41 Ga0209672_100025 3300025228 Bacteria 350006
42 Ga0209672_100283 3300025228 Bacteria 36077
43 Ga0209147_100032 3300025229 Bacteria 350006
44 Ga0209258_100050 3300025242 Bacteria 350006
45 Ga0209148_1000060 3300025254 Bacteria 350006
46 Ga0209565_1006220 3300025263 Bacteria 3377
47 Ga0209455_1000055 3300025272 Bacteria 350006
48 Ga0209673_1000404 3300025273 Bacteria 76454
49 Ga0207647_10000696 3300025904 Bacteria 26326
50 Ga0207647_10022671 3300025904 Bacteria 4167
51 Ga0207695_10004711 3300025913 Bacteria 18476
52 Ga0207695_10018296 3300025913 Bacteria 8106
53 Ga0207671_10023343 3300025914 Bacteria 4664
54 Ga0207660_10037739 3300025917 Bacteria 3369
55 Ga0207657_10000072 3300025919 Bacteria 93655
56 Ga0207657_10000201 3300025919 Bacteria 62212
57 Ga0207657_10000232 3300025919 Bacteria 58527
58 Ga0207690_10000019 3300025932 Bacteria 235380
59 Ga0207667_10001164 3300025949 Bacteria 33031
60 Ga0207667_10016153 3300025949 Bacteria 8440
61 Ga0207667_10024651 3300025949 Bacteria 6600
62 Ga0207651_10001946 3300025960 Bacteria 9707
63 Ga0207678_10003851 3300026067 Bacteria 13493
64 Ga0207698_10037026 3300026142 Bacteria 3589
65 Ga0209371_1000067 3300027312 Bacteria 210294
66 Ga0268266_10105440 3300028379 Unclassified 2490
67 Ga0268256_1000078 3300030500 Bacteria 176504
68 Ga0316575_10001109 3300031665 Bacteria 8393
69 Ga0316579_10000928 3300031691 Bacteria 10179
70 Ga0316579_10008947 3300031691 Bacteria 4199
71 Ga0316578_10005223 3300031728 Bacteria 6263
72 Ga0316577_10040714 3300031733 Unclassified 2598
73 Ga0307416_100067258 3300032002 Bacteria 2954
74 Ga0307416_100075556 3300032002 Bacteria 2820
75 Ga0316583_10012250 3300032133 Unclassified 3094
76 Ga0316574_0004484 3300035398 Bacteria 7326
77 Ga0316574_0005357 3300035398 Bacteria 6834
78 Ga0316574_0038327 3300035398 Bacteria 2942
79 Ga0316582_0002552 3300036647 Bacteria 8614
80 Ga0316582_0092125 3300036647 Bacteria 1996
81 Ga0316584_0013694 3300036712 Bacteria 5750
82 Ga0316584_0015269 3300036712 Bacteria 5488
83 Ga0316584_0016700 3300036712 Bacteria 5265
84 Ga0316584_0024545 3300036712 Bacteria 4413
85 Ga0316584_0033045 3300036712 Bacteria 3830
86 Ga0395899_0000423 3300037312 Bacteria 48936
87 Ga0395899_0000678 3300037312 Bacteria 34486
88 Ga0395899_0021342 3300037312 Bacteria 4912
89 Ga0395900_0000607 3300037418 Bacteria 48936
90 Ga0395900_0002283 3300037418 Bacteria 21301
91 Ga0395900_0006579 3300037418 Bacteria 12094
92 Ga0395900_0074710 3300037418 Bacteria 3484
93 Ga0395900_0136332 3300037418 Bacteria 2515
94 Ga0395898_0000695 3300037466 Bacteria 60320
95 Ga0395898_0001367 3300037466 Bacteria 35066
96 Ga0395898_0002550 3300037466 Bacteria 21378
97 Ga0316581_0005260 3300037588 Bacteria 3359
98 Ga0395901_0000004 3300038443 Bacteria 657361
99 Ga0395901_0000877 3300038443 Bacteria 33139
100 Ga0395901_0001463 3300038443 Bacteria 24577
101 Ga0395901_0004345 3300038443 Bacteria 14294
102 Ga0395901_0011035 3300038443 Bacteria 9151
103 Ga0395901_0040478 3300038443 Bacteria 4827
104 Ga0439448_0000137 3300042005 Bacteria 13878
105 Ga0439444_0000071 3300042437 Bacteria 7667
106 Ga0466969_0008820 3300044656 Bacteria 5345
107 Ga0466969_0012619 3300044656 Bacteria 4452
108 Ga0466973_0015470 3300044659 Bacteria 7211
109 Ga0466982_0028481 3300044672 Bacteria 3283
110 Ga0466965_0000245 3300044683 Bacteria 17435
111 Ga0466965_0013008 3300044683 Bacteria 3920
112 Ga0466966_0000017 3300044684 Bacteria 123642
113 Ga0466966_0001448 3300044684 Bacteria 15248
114 Ga0466966_0004407 3300044684 Bacteria 9287
115 Ga0466966_0069449 3300044684 Bacteria 2210
116 Ga0466961_0009955 3300044693 Bacteria 6059
117 Ga0466961_0015490 3300044693 Bacteria 4892
118 Ga0466961_0016633 3300044693 Bacteria 4729
119 Ga0466968_0014330 3300044735 Bacteria 3132
120 Ga0466970_0001731 3300044765 Bacteria 10520
121 Ga0466957_0004528 3300044842 Bacteria 7756
122 Ga0466957_0016324 3300044842 Bacteria 4343
123 Ga0466957_0023264 3300044842 Bacteria 3662
124 Ga0466957_0048322 3300044842 Bacteria 2586
125 Ga0466959_0013108 3300045049 Bacteria 6003
126 Ga0466958_0005122 3300045836 Bacteria 7006
127 Ga0495603_0002256 3300046455 Bacteria 11323
128 Ga0495590_0000516 3300046457 Bacteria 18815
129 Ga0495590_0004099 3300046457 Bacteria 5908
130 Ga0495629_0000045 3300046459 Bacteria 110283
131 Ga0495629_0021418 3300046459 Bacteria 4614
132 Ga0495638_0003218 3300046460 Bacteria 12921
133 Ga0495638_0005319 3300046460 Bacteria 9601
134 Ga0495653_0005633 3300046463 Bacteria 10223
135 Ga0495653_0074885 3300046463 Bacteria 2521
136 Ga0495650_0000549 3300046471 Bacteria 53534
137 Ga0495650_0011736 3300046471 Bacteria 4768
138 Ga0495605_0016917 3300046474 Bacteria 3939
139 Ga0495583_0003469 3300046506 Bacteria 11966
140 Ga0495606_0003591 3300046507 Bacteria 16342
141 Ga0495606_0017731 3300046507 Bacteria 5369
142 Ga0495628_0009947 3300046516 Bacteria 8096
143 Ga0495628_0011169 3300046516 Bacteria 7600
144 Ga0495630_0064837 3300046517 Bacteria 2745
145 Ga0495630_0069378 3300046517 Bacteria 2652
146 Ga0495648_0037550 3300046524 Bacteria 3110
147 Ga0495665_0000485 3300046531 Bacteria 19993
148 Ga0495645_0002722 3300046543 Bacteria 11987
149 Ga0495623_0001742 3300046679 Bacteria 14609
150 Ga0495646_0018200 3300046680 Bacteria 4449
151 Ga0495669_0008898 3300046684 Bacteria 4230
152 Ga0495669_0010237 3300046684 Bacteria 3961
153 Ga0495624_0006124 3300046690 Bacteria 8569
154 Ga0495649_0002780 3300046694 Bacteria 12177
155 Ga0495649_0012318 3300046694 Bacteria 4983
156 Ga0495589_0007649 3300046794 Bacteria 5658
157 Ga0495600_0021894 3300046809 Bacteria 4099
158 Ga0495672_0030002 3300047320 Bacteria 3417
159 Ga0495680_0008549 3300047322 Bacteria 9297
160 Ga0495687_001177 3300047443 Bacteria 25211
161 Ga0495687_005924 3300047443 Bacteria 7645
162 Ga0495673_0016224 3300047469 Bacteria 3814
163 Ga0495686_0000029 3300047472 Bacteria 369110
164 Ga0495593_0003065 3300047673 Bacteria 10060
165 Ga0495602_0000614 3300048088 Bacteria 33492
166 Ga0495626_0024475 3300048091 Bacteria 2960
167 Ga0496100_0002809 3300048903 Bacteria 8921
168 Ga0496101_0015596 3300048904 Bacteria 5124
169 Ga0496103_0001894 3300048906 Bacteria 13608
170 Ga0496106_0001047 3300048909 Bacteria 20345
171 Ga0496111_0015061 3300048914 Bacteria 5297
172 Ga0496112_0016998 3300048915 Bacteria 6827
173 Ga0496113_0057089 3300048916 Bacteria 2932
174 Ga0496121_0003151 3300048924 Bacteria 23787
175 Ga0496121_0016415 3300048924 Bacteria 7650
176 Ga0496122_0026302 3300048925 Bacteria 5020
177 Ga0496125_0007186 3300048928 Bacteria 11873
178 Ga0495682_0005163 3300049460 Bacteria 5459
179 Ga0501033_0005610 3300049570 Bacteria 9915
180 Ga0501038_0000778 3300049574 Bacteria 28249
181 Ga0501047_0037605 3300049581 Bacteria 4680
182 Ga0501073_0000635 3300049589 Bacteria 24608
183 nmdc:mga08y16_23881_c1 3300050511 Bacteria 6457
184 Ga0500556_0001443 3300053104 Bacteria 10107
185 Ga0500618_003906 3300053125 Bacteria 4959
186 Ga0500616_0000096 3300053153 Bacteria 179125
187 Ga0500634_0003295 3300053161 Bacteria 7136

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036647 Ga0316582_0092125 Ga0316582_0092125_120_1973 573
2 3300038443 Ga0395901_0040478 Ga0395901_0040478_2966_4804 594
3 3300037312 Ga0395899_0021342 Ga0395899_0021342_24_1982 618
4 3300037418 Ga0395900_0136332 Ga0395900_0136332_16_1974 618
5 3300042437 Ga0439444_0000071 Ga0439444_0000071_4576_6741 639
6 3300047443 Ga0495687_005924 Ga0495687_005924_3896_6091 640
7 3300013102 Ga0157371_10001169 Ga0157371_100011695 643
8 3300005364 Ga0070673_100028232 Ga0070673_1000282323 650
9 3300025960 Ga0207651_10001946 Ga0207651_100019468 650
10 3300005457 Ga0070662_100000439 Ga0070662_1000004398 652
11 3300025949 Ga0207667_10001164 Ga0207667_1000116433 652
12 3300044684 Ga0466966_0069449 Ga0466966_0069449_55_2178 656
13 3300053161 Ga0500634_0003295 Ga0500634_0003295_3153_5231 658
14 3300044842 Ga0466957_0048322 Ga0466957_0048322_55_2259 660
15 3300031691 Ga0316579_10008947 Ga0316579_100089472 662
16 3300035398 Ga0316574_0038327 Ga0316574_0038327_276_2417 664
17 3300037588 Ga0316581_0005260 Ga0316581_0005260_154_2295 664
18 3300028379 Ga0268266_10105440 Ga0268266_101054402 665
19 3300044656 Ga0466969_0012619 Ga0466969_0012619_1198_3441 665
20 3300044659 Ga0466973_0015470 Ga0466973_0015470_4204_6447 665
21 3300044683 Ga0466965_0000245 Ga0466965_0000245_9658_11901 665
22 3300044765 Ga0466970_0001731 Ga0466970_0001731_5525_7768 665
23 3300031691 Ga0316579_10000928 Ga0316579_100009289 666
24 3300036712 Ga0316584_0024545 Ga0316584_0024545_655_2772 666
25 3300005339 Ga0070660_100000545 Ga0070660_10000054515 667
26 3300005366 Ga0070659_100000772 Ga0070659_10000077219 667
27 3300025919 Ga0207657_10000201 Ga0207657_1000020144 667
28 3300037312 Ga0395899_0000423 Ga0395899_0000423_45373_47568 670
29 3300037418 Ga0395900_0000607 Ga0395900_0000607_45373_47568 670
30 3300037466 Ga0395898_0001367 Ga0395898_0001367_31503_33698 670
31 3300044842 Ga0466957_0016324 Ga0466957_0016324_920_3115 670
32 3300045049 Ga0466959_0013108 Ga0466959_0013108_1144_3339 670
33 3300044684 Ga0466966_0000017 Ga0466966_0000017_120280_122475 671
34 3300044693 Ga0466961_0009955 Ga0466961_0009955_1362_3557 671
35 3300045836 Ga0466958_0005122 Ga0466958_0005122_1147_3342 671
36 3300037418 Ga0395900_0002283 Ga0395900_0002283_17921_20122 672
37 3300044683 Ga0466965_0013008 Ga0466965_0013008_1552_3747 674
38 3300046455 Ga0495603_0002256 Ga0495603_0002256_6750_9152 674
39 3300046459 Ga0495629_0000045 Ga0495629_0000045_24725_27127 674
40 3300046463 Ga0495653_0074885 Ga0495653_0074885_31_2433 674
41 3300046471 Ga0495650_0000549 Ga0495650_0000549_49426_51828 674
42 3300046543 Ga0495645_0002722 Ga0495645_0002722_1638_4040 674
43 3300035398 Ga0316574_0004484 Ga0316574_0004484_31_2133 675
44 3300046516 Ga0495628_0009947 Ga0495628_0009947_421_2592 675
45 3300015262 Ga0182007_10000341 Ga0182007_1000034120 676
46 3300027312 Ga0209371_1000067 Ga0209371_100006749 676
47 3300030500 Ga0268256_1000078 Ga0268256_100007855 676
48 3300044693 Ga0466961_0015490 Ga0466961_0015490_1858_4056 676
49 3300031665 Ga0316575_10001109 Ga0316575_100011096 677
50 3300031728 Ga0316578_10005223 Ga0316578_100052232 677
51 3300031733 Ga0316577_10040714 Ga0316577_100407141 677
52 3300032133 Ga0316583_10012250 Ga0316583_100122502 677
53 3300038443 Ga0395901_0004345 Ga0395901_0004345_11087_13198 677
54 3300038443 Ga0395901_0000877 Ga0395901_0000877_1175_3382 678
55 3300003316 rootH1_10004925 rootH1_100049258 679
56 3300044672 Ga0466982_0028481 Ga0466982_0028481_609_2843 679
57 3300044693 Ga0466961_0016633 Ga0466961_0016633_1786_4020 679
58 3300044735 Ga0466968_0014330 Ga0466968_0014330_422_2656 679
59 3300003758 Ga0055532_1000319 Ga0055532_100031923 680
60 3300003760 Ga0055527_1000311 Ga0055527_10003114 680
61 3300003761 Ga0055535_1000089 Ga0055535_100008974 680
62 3300003762 Ga0055542_1000121 Ga0055542_100012174 680
63 3300003763 Ga0055529_1000141 Ga0055529_100014174 680
64 3300003790 Ga0055528_1005234 Ga0055528_10052344 680
65 3300005327 Ga0070658_10035643 Ga0070658_100356432 680
66 3300005563 Ga0068855_100070132 Ga0068855_1000701323 680
67 3300013104 Ga0157370_10010873 Ga0157370_100108732 680
68 3300025228 Ga0209672_100025 Ga0209672_100025109 680
69 3300025229 Ga0209147_100032 Ga0209147_100032109 680
70 3300025242 Ga0209258_100050 Ga0209258_100050109 680
71 3300025254 Ga0209148_1000060 Ga0209148_1000060109 680
72 3300025263 Ga0209565_1006220 Ga0209565_10062203 680
73 3300025272 Ga0209455_1000055 Ga0209455_1000055109 680
74 3300025273 Ga0209673_1000404 Ga0209673_100040422 680
75 3300025949 Ga0207667_10024651 Ga0207667_100246516 680
76 3300036712 Ga0316584_0033045 Ga0316584_0033045_1073_3298 680
77 3300044842 Ga0466957_0004528 Ga0466957_0004528_2941_5160 680
78 3300002067 JGI24735J21928_10001573 JGI24735J21928_100015733 681
79 3300005327 Ga0070658_10021022 Ga0070658_100210224 681
80 3300005339 Ga0070660_100002836 Ga0070660_1000028364 681
81 3300009093 Ga0105240_10007303 Ga0105240_1000730311 681
82 3300010375 Ga0105239_10002310 Ga0105239_1000231012 681
83 3300013104 Ga0157370_10000384 Ga0157370_1000038413 681
84 3300013105 Ga0157369_10001104 Ga0157369_100011049 681
85 3300013296 Ga0157374_10000077 Ga0157374_1000007752 681
86 3300013307 Ga0157372_10003724 Ga0157372_1000372413 681
87 3300025904 Ga0207647_10000696 Ga0207647_1000069619 681
88 3300025913 Ga0207695_10018296 Ga0207695_100182964 681
89 3300025919 Ga0207657_10000232 Ga0207657_1000023224 681
90 3300036712 Ga0316584_0013694 Ga0316584_0013694_88_2250 681
91 3300042005 Ga0439448_0000137 Ga0439448_0000137_7876_10101 681
92 3300009093 Ga0105240_10003454 Ga0105240_100034545 682
93 3300025913 Ga0207695_10004711 Ga0207695_100047115 682
94 3300025914 Ga0207671_10023343 Ga0207671_100233432 682
95 3300049570 Ga0501033_0005610 Ga0501033_0005610_3167_5359 682
96 3300049574 Ga0501038_0000778 Ga0501038_0000778_9542_11734 682
97 3300049581 Ga0501047_0037605 Ga0501047_0037605_2109_4301 682
98 3300049589 Ga0501073_0000635 Ga0501073_0000635_17172_19364 682
99 3300037312 Ga0395899_0000678 Ga0395899_0000678_7231_9363 683
100 3300037418 Ga0395900_0006579 Ga0395900_0006579_5399_7531 683
101 3300038443 Ga0395901_0011035 Ga0395901_0011035_1334_3466 683
102 3300035398 Ga0316574_0005357 Ga0316574_0005357_1046_3211 685
103 3300036712 Ga0316584_0016700 Ga0316584_0016700_826_2991 685
104 3300032002 Ga0307416_100075556 Ga0307416_1000755562 686
105 3300005367 Ga0070667_100010672 Ga0070667_1000106726 687
106 3300013105 Ga0157369_10000278 Ga0157369_100002782 687
107 3300013308 Ga0157375_10012793 Ga0157375_100127937 687
108 3300020070 Ga0206356_11270277 Ga0206356_112702772 687
109 3300022467 Ga0224712_10001189 Ga0224712_100011892 687
110 3300046460 Ga0495638_0005319 Ga0495638_0005319_5148_7424 687
111 3300046474 Ga0495605_0016917 Ga0495605_0016917_130_2406 687
112 3300046684 Ga0495669_0010237 Ga0495669_0010237_1085_3361 687
113 3300046794 Ga0495589_0007649 Ga0495589_0007649_2027_4303 687
114 iso_pu_bacteria 2513237082 2513552884 687
115 iso_pu_bacteria 2513237083 2513559734 687
116 iso_pu_bacteria 8003955200 8003956420 687
117 3300036647 Ga0316582_0002552 Ga0316582_0002552_4544_6697 688
118 3300036712 Ga0316584_0015269 Ga0316584_0015269_2693_4846 690
119 3300053104 Ga0500556_0001443 Ga0500556_0001443_1305_3542 690
120 3300044684 Ga0466966_0004407 Ga0466966_0004407_953_3145 691
121 3300044842 Ga0466957_0023264 Ga0466957_0023264_1291_3519 692
122 3300053153 Ga0500616_0000096 Ga0500616_0000096_75108_77399 692
123 3300009094 Ga0111539_10019063 Ga0111539_100190637 693
124 3300025917 Ga0207660_10037739 Ga0207660_100377392 693
125 3300046517 Ga0495630_0069378 Ga0495630_0069378_287_2500 693
126 3300050511 nmdc:mga08y16_23881_c1 nmdc:mga08y16_23881_c1_383_2596 693
127 iso_pu_bacteria 2599185240 2599745055 693
128 iso_pu_bacteria 2599185355 2600206764 693
129 iso_pu_bacteria 2675903129 2676743217 693
130 3300005339 Ga0070660_100000029 Ga0070660_1000000296 694
131 3300005366 Ga0070659_100000006 Ga0070659_10000000677 694
132 3300010375 Ga0105239_10011021 Ga0105239_100110215 694
133 3300013102 Ga0157371_10019197 Ga0157371_100191973 694
134 3300013105 Ga0157369_10000884 Ga0157369_100008842 694
135 3300025228 Ga0209672_100283 Ga0209672_1002835 694
136 3300025919 Ga0207657_10000072 Ga0207657_1000007283 694
137 3300025932 Ga0207690_10000019 Ga0207690_10000019137 694
138 3300025949 Ga0207667_10016153 Ga0207667_100161535 694
139 3300026067 Ga0207678_10003851 Ga0207678_100038513 694
140 3300026142 Ga0207698_10037026 Ga0207698_100370265 694
141 3300037418 Ga0395900_0074710 Ga0395900_0074710_249_2444 694
142 3300037466 Ga0395898_0000695 Ga0395898_0000695_1250_3457 694
143 3300037466 Ga0395898_0002550 Ga0395898_0002550_1350_3575 694
144 3300038443 Ga0395901_0000004 Ga0395901_0000004_654052_656247 694
145 3300038443 Ga0395901_0001463 Ga0395901_0001463_1115_3310 694
146 3300044656 Ga0466969_0008820 Ga0466969_0008820_2473_4689 694
147 3300044684 Ga0466966_0001448 Ga0466966_0001448_12227_14443 694
148 3300048916 Ga0496113_0057089 Ga0496113_0057089_641_2860 694
149 3300048924 Ga0496121_0016415 Ga0496121_0016415_1522_3741 694
150 iso_pu_bacteria 2515154123 2515687935 694
151 iso_pu_bacteria 2519103095 2519462625 694
152 iso_pu_bacteria 2582581311 2585291893 694
153 iso_pu_bacteria 2816332253 2817262977 694
154 iso_pu_bacteria 2816332256 2817276438 694
155 iso_pu_bacteria 2816332286 2817454715 694
156 iso_pu_bacteria 2863421361 2863423160 694
157 iso_pu_bacteria 2904564687 2904567016 694
158 iso_pu_bacteria 2904571731 2904574040 694
159 iso_pu_bacteria 2928157003 2928162698 694
160 iso_pu_bacteria 2928163908 2928166739 694
161 iso_pu_bacteria 2928536128 2928541152 694
162 iso_pu_bacteria 2981990288 2981995395 694
163 iso_pu_bacteria 641736154 642418518 694
164 iso_pu_bacteria 8020807995 8020813871 694
165 iso_pu_bacteria 8020938398 8020944323 694
166 iso_pu_bacteria 8020953355 8020958538 694
167 iso_pu_bacteria 8039098773 8039098980 694
168 iso_pu_bacteria 8040167225 8040171802 694
169 iso_pu_bacteria 8040173305 8040174250 694
170 3300032002 Ga0307416_100067258 Ga0307416_1000672582 695
171 3300046507 Ga0495606_0003591 Ga0495606_0003591_2945_5248 696
172 3300046684 Ga0495669_0008898 Ga0495669_0008898_529_2832 696
173 3300046694 Ga0495649_0002780 Ga0495649_0002780_1700_4003 696
174 iso_pu_bacteria 2904434214 2904438650 701
175 3300047472 Ga0495686_0000029 Ga0495686_0000029_136477_138738 702
176 3300047443 Ga0495687_001177 Ga0495687_001177_10652_13000 717
177 3300046809 Ga0495600_0021894 Ga0495600_0021894_1512_3776 722
178 3300047322 Ga0495680_0008549 Ga0495680_0008549_6480_8921 722
179 3300053125 Ga0500618_003906 Ga0500618_003906_577_2994 725
180 3300046459 Ga0495629_0021418 Ga0495629_0021418_855_3308 734
181 3300046463 Ga0495653_0005633 Ga0495653_0005633_6137_8590 734
182 3300046516 Ga0495628_0011169 Ga0495628_0011169_4642_7095 734
183 3300046517 Ga0495630_0064837 Ga0495630_0064837_300_2600 734
184 3300046531 Ga0495665_0000485 Ga0495665_0000485_15968_18421 734
185 3300046679 Ga0495623_0001742 Ga0495623_0001742_3368_5821 734
186 3300046680 Ga0495646_0018200 Ga0495646_0018200_1748_4048 734
187 3300046690 Ga0495624_0006124 Ga0495624_0006124_1265_3718 734
188 3300047673 Ga0495593_0003065 Ga0495593_0003065_5550_7850 734
189 3300048088 Ga0495602_0000614 Ga0495602_0000614_26922_29375 734
190 3300046471 Ga0495650_0011736 Ga0495650_0011736_1458_3737 736
191 iso_pu_bacteria 2515154122 2515683548 744
192 iso_pu_bacteria 2902682994 2902684984 744
193 3300046457 Ga0495590_0004099 Ga0495590_0004099_2393_4789 745
194 3300046460 Ga0495638_0003218 Ga0495638_0003218_9637_12033 745
195 3300046506 Ga0495583_0003469 Ga0495583_0003469_6632_9028 745
196 3300046507 Ga0495606_0017731 Ga0495606_0017731_2297_4693 745
197 3300046524 Ga0495648_0037550 Ga0495648_0037550_590_2986 745
198 3300046694 Ga0495649_0012318 Ga0495649_0012318_2211_4607 745
199 3300047320 Ga0495672_0030002 Ga0495672_0030002_419_2815 745
200 3300047469 Ga0495673_0016224 Ga0495673_0016224_1040_3436 745
201 3300048091 Ga0495626_0024475 Ga0495626_0024475_142_2538 745
202 3300049460 Ga0495682_0005163 Ga0495682_0005163_2939_5335 745
203 3300002067 JGI24735J21928_10000287 JGI24735J21928_100002873 747
204 3300009011 Ga0105251_10000854 Ga0105251_1000085420 747
205 3300025904 Ga0207647_10022671 Ga0207647_100226712 747
206 3300046457 Ga0495590_0000516 Ga0495590_0000516_6998_9298 747
207 3300048903 Ga0496100_0002809 Ga0496100_0002809_6217_8517 747
208 3300048904 Ga0496101_0015596 Ga0496101_0015596_2083_4383 747
209 3300048906 Ga0496103_0001894 Ga0496103_0001894_8335_10686 747
210 3300048909 Ga0496106_0001047 Ga0496106_0001047_4523_6823 747
211 3300048914 Ga0496111_0015061 Ga0496111_0015061_2547_4847 747
212 3300048915 Ga0496112_0016998 Ga0496112_0016998_2800_5100 747
213 3300048924 Ga0496121_0003151 Ga0496121_0003151_20314_22614 747
214 3300048925 Ga0496122_0026302 Ga0496122_0026302_404_2704 747
215 3300048928 Ga0496125_0007186 Ga0496125_0007186_9169_11469 747

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00614

PLDc

Phospholipase D Active site motif

389

414

0.95

PF00614

PLDc

Phospholipase D Active site motif

167

194

0.93

PF09335

VTT_dom

VTT domain

592

709

0.92

PF13091

PLDc_2

PLD-like domain

298

439

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ohr-assembly4.cif.gz_D structure of compound 5 bound human phospholipase d1 catalytic domain 0.8104 16 422
6ohr-assembly1.cif.gz_A structure of compound 5 bound human phospholipase d1 catalytic domain 0.79 14 392
6ohr-assembly3.cif.gz_C structure of compound 5 bound human phospholipase d1 catalytic domain 0.7841 16 422
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.7841 242 409
6kz8-assembly2.cif.gz_B crystal structure of plant phospholipase d alpha complex with phosphatidic acid 0.7768 19 418
ID Description Score Start End Superfamily
af_Q2FWG8_323_468_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8739 258 413 3.30.870.10
af_B0V1J1_670_900_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8246 242 392 3.30.870.10
af_P0A6H8_316_458_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8244 253 409 3.30.870.10
af_Q65XR9_493_717_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8124 250 392 3.30.870.10
af_Q54WR4_867_1086_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.8119 242 392 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A2W5RCF3-F1-model_v4 deleted 0.9554 121 462
AF-A0A0U2ZSS0-F1-model_v4 Bac_cardiolipin: cardiolipin 0.9512 154 340
AF-A0A4Q3TL99-F1-model_v4 Phospholipase 0.9489 8 360 GO:0004630
GO:0005886
GO:0009395
AF-A0A0U2ZSS0-F1-model_v4 Bac_cardiolipin: cardiolipin 0.9462 154 340
AF-A0A5M8BAY4-F1-model_v4 PLD phosphodiesterase domain-containing protein 0.9453 11 215 GO:0004630
GO:0009395

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pLDDT pTM Quality
73.15 0.69 Medium
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Predicted Structure (AlphaFold2)

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