F326393

General Info

Members Datasets Scaffolds Average Seq Length
215 131 430 379

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10139890|Ga0105238_101398902
Length 407
Sequence LVTGEEADPCYAFAVPAKSQPRNAAGTLLSAFDEQDKVFSRAFSILQQAITERAFPAACIAVTRNGQLTALKSFGSFVYETDPAGGNFDSLFGATVFDLASLTKPVATTTMSAILYERGLLELDAPIIGTVPEFRALTDPRRNEVTFRMLLSHSSGLPAYEKLFLKARSRDEILQAALTTPLTADPAARAEYSDIGFIILGLALERLSGESLDVFCQHEIFGPLGMSNTTFNPPERIRSKIPPTADERVEAVPAQDAPVRSTFRNRLIQGEVQDENASVLGGVAGHAGLFSTAHDLAIFASTMLNGGTPILRPETIALFTRRQSAPAGTSRALGWDTPSTPSQSGKYFGPNSYGHLGYTGTSLWIDPDRQLSITLFTNRTWPDCSNQTIKQVRPIFHDAIIEALLQE

Samples

Sample ID Description Type Environment
1 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
107 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
130 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.53
Metatranscriptomes 0.47
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.12
Rhizosphere 94.88
Stem 0
Stem Tuber 0
Unclassified 18.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105238_10139890 3300009551 Unclassified 2398
2 Ga0070683_100047148 3300005329 Unclassified 3982
3 Ga0068869_100009093 3300005334 Bacteria 6437
4 Ga0070680_100001654 3300005336 Bacteria 16298
5 Ga0070680_100112228 3300005336 Unclassified 2270
6 Ga0068868_100014126 3300005338 Bacteria 5879
7 Ga0068868_100034151 3300005338 Bacteria 3926
8 Ga0068868_100080273 3300005338 Unclassified 2614
9 Ga0070660_100197711 3300005339 Bacteria 1630
10 Ga0070691_10047367 3300005341 Bacteria 2044
11 Ga0070709_10007751 3300005434 Bacteria 5896
12 Ga0070709_10010380 3300005434 Bacteria 5157
13 Ga0070714_100002296 3300005435 Bacteria 14067
14 Ga0070714_100059710 3300005435 Bacteria 3270
15 Ga0070714_100073923 3300005435 Bacteria 2954
16 Ga0070713_100033353 3300005436 Unclassified 4123
17 Ga0070713_100108729 3300005436 Bacteria 2414
18 Ga0070713_100158758 3300005436 Unclassified 2017
19 Ga0070713_100186281 3300005436 Bacteria 1868
20 Ga0070711_100002888 3300005439 Bacteria 9898
21 Ga0070711_100038688 3300005439 Unclassified 3209
22 Ga0070708_100004189 3300005445 Bacteria 11331
23 Ga0070708_100045155 3300005445 Bacteria 3880
24 Ga0070678_100044556 3300005456 Bacteria 3169
25 Ga0070681_10000547 3300005458 Bacteria 31011
26 Ga0070681_10017024 3300005458 Bacteria 7264
27 Ga0068867_100007199 3300005459 Bacteria 7863
28 Ga0070706_100006206 3300005467 Bacteria 11307
29 Ga0070706_100040522 3300005467 Unclassified 4300
30 Ga0070706_100070269 3300005467 Unclassified 3238
31 Ga0070707_100001743 3300005468 Bacteria 20945
32 Ga0070698_100001966 3300005471 Bacteria 22836
33 Ga0070699_100108947 3300005518 Bacteria 2431
34 Ga0070699_100126639 3300005518 Bacteria 2249
35 Ga0070679_100067275 3300005530 Unclassified 3573
36 Ga0070697_100009058 3300005536 Bacteria 7777
37 Ga0068853_100301322 3300005539 Unclassified 1481
38 Ga0070695_100125025 3300005545 Bacteria 1765
39 Ga0070693_100107583 3300005547 Bacteria 1709
40 Ga0070665_100014166 3300005548 Bacteria 8012
41 Ga0068855_100000212 3300005563 Bacteria 73927
42 Ga0068855_100209187 3300005563 Unclassified 2193
43 Ga0068857_100008874 3300005577 Bacteria 8708
44 Ga0068854_100001555 3300005578 Bacteria 13925
45 Ga0068856_100001039 3300005614 Bacteria 29492
46 Ga0068856_100003270 3300005614 Bacteria 16476
47 Ga0068856_100026304 3300005614 Bacteria 5674
48 Ga0068856_100045211 3300005614 Bacteria 4334
49 Ga0068859_100015506 3300005617 Bacteria 7657
50 Ga0068859_100020852 3300005617 Bacteria 6577
51 Ga0068861_100086872 3300005719 Bacteria 2459
52 Ga0068863_100081715 3300005841 Bacteria 3061
53 Ga0068858_100000430 3300005842 Bacteria 43681
54 Ga0068860_100050896 3300005843 Bacteria 3943
55 Ga0070717_10004704 3300006028 Bacteria 9916
56 Ga0070717_10013821 3300006028 Bacteria 6198
57 Ga0070717_10042250 3300006028 Bacteria 3718
58 Ga0070717_10072185 3300006028 Unclassified 2882
59 Ga0070716_100017383 3300006173 Bacteria 3728
60 Ga0070712_100019385 3300006175 Unclassified 4436
61 Ga0070712_100047790 3300006175 Bacteria 2963
62 Ga0097621_100002485 3300006237 Bacteria 12627
63 Ga0068871_100005060 3300006358 Bacteria 9208
64 Ga0068871_100119044 3300006358 Bacteria 2229
65 Ga0068871_100130581 3300006358 Bacteria 2130
66 Ga0075433_10197257 3300006852 Unclassified 1790
67 Ga0075434_100003353 3300006871 Bacteria 14332
68 Ga0068865_100016049 3300006881 Bacteria 4785
69 Ga0075436_100009109 3300006914 Bacteria 6792
70 Ga0075436_100063442 3300006914 Bacteria 2554
71 Ga0097620_100015506 3300006931 Bacteria 7657
72 Ga0097620_100020853 3300006931 Bacteria 6577
73 Ga0099794_10023484 3300007265 Bacteria 2821
74 Ga0105240_10023686 3300009093 Bacteria 8109
75 Ga0105240_10122304 3300009093 Unclassified 3132
76 Ga0105247_10024641 3300009101 Bacteria 3627
77 Ga0105241_10004983 3300009174 Bacteria 9795
78 Ga0105241_10021828 3300009174 Bacteria 4738
79 Ga0105241_10076182 3300009174 Bacteria 2615
80 Ga0105241_10193234 3300009174 Unclassified 1695
81 Ga0105248_10083202 3300009177 Unclassified 3600
82 Ga0105237_10038417 3300009545 Unclassified 4833
83 Ga0105237_10061581 3300009545 Unclassified 3752
84 Ga0105237_10073480 3300009545 Unclassified 3412
85 Ga0105237_10118180 3300009545 Bacteria 2645
86 Ga0105237_10390248 3300009545 Bacteria 1397
87 Ga0105238_10000064 3300009551 Bacteria 122380
88 Ga0105238_10019565 3300009551 Bacteria 6894
89 Ga0105249_10006163 3300009553 Bacteria 10405
90 Ga0105239_10029786 3300010375 Bacteria 6002
91 Ga0105239_10033917 3300010375 Bacteria 5603
92 Ga0105246_10060694 3300011119 Bacteria 2628
93 Ga0157373_10006902 3300013100 Bacteria 8451
94 Ga0157371_10024233 3300013102 Bacteria 4433
95 Ga0157370_10023273 3300013104 Bacteria 6152
96 Ga0157370_10131137 3300013104 Bacteria 2338
97 Ga0157370_10187968 3300013104 Unclassified 1917
98 Ga0157369_10000506 3300013105 Bacteria 51297
99 Ga0157369_10013281 3300013105 Bacteria 9319
100 Ga0157369_10128228 3300013105 Unclassified 2689
101 Ga0157374_10001714 3300013296 Bacteria 18399
102 Ga0157374_10007674 3300013296 Bacteria 9212
103 Ga0157374_10012446 3300013296 Bacteria 7402
104 Ga0157378_10128127 3300013297 Bacteria 2346
105 Ga0163162_10012866 3300013306 Bacteria 8172
106 Ga0163162_10016726 3300013306 Bacteria 7169
107 Ga0157372_10000378 3300013307 Bacteria 49389
108 Ga0157372_10004481 3300013307 Bacteria 14902
109 Ga0157372_10014447 3300013307 Bacteria 8448
110 Ga0157372_10014483 3300013307 Bacteria 8439
111 Ga0157372_10028054 3300013307 Bacteria 6140
112 Ga0157372_10038635 3300013307 Bacteria 5267
113 Ga0157372_10099032 3300013307 Unclassified 3325
114 Ga0157372_10182476 3300013307 Bacteria 2430
115 Ga0157372_10213503 3300013307 Unclassified 2236
116 Ga0157375_10015231 3300013308 Bacteria 6880
117 Ga0163163_10033445 3300014325 Bacteria 4974
118 Ga0163163_10143762 3300014325 Bacteria 2428
119 Ga0163163_10224064 3300014325 Bacteria 1929
120 Ga0157379_10003088 3300014968 Bacteria 14088
121 Ga0157376_10124753 3300014969 Bacteria 2288
122 Ga0207699_10114446 3300025906 Unclassified 1734
123 Ga0207684_10003177 3300025910 Bacteria 16141
124 Ga0207684_10081653 3300025910 Unclassified 2751
125 Ga0207684_10194805 3300025910 Bacteria 1748
126 Ga0207707_10000842 3300025912 Bacteria 30128
127 Ga0207707_10001752 3300025912 Bacteria 19949
128 Ga0207707_10004837 3300025912 Bacteria 11813
129 Ga0207707_10015913 3300025912 Bacteria 6560
130 Ga0207695_10036349 3300025913 Bacteria 5326
131 Ga0207695_10088954 3300025913 Unclassified 3107
132 Ga0207695_10111728 3300025913 Bacteria 2711
133 Ga0207671_10021299 3300025914 Bacteria 4920
134 Ga0207671_10165614 3300025914 Bacteria 1714
135 Ga0207693_10020095 3300025915 Bacteria 5312
136 Ga0207693_10033422 3300025915 Unclassified 4059
137 Ga0207663_10039896 3300025916 Bacteria 2849
138 Ga0207663_10055567 3300025916 Bacteria 2485
139 Ga0207657_10000878 3300025919 Bacteria 31777
140 Ga0207652_10003576 3300025921 Bacteria 12820
141 Ga0207652_10005463 3300025921 Bacteria 10315
142 Ga0207646_10007192 3300025922 Bacteria 11362
143 Ga0207694_10001302 3300025924 Bacteria 21509
144 Ga0207687_10001613 3300025927 Bacteria 15555
145 Ga0207700_10186110 3300025928 Bacteria 1742
146 Ga0207664_10000369 3300025929 Bacteria 32894
147 Ga0207664_10251589 3300025929 Bacteria 1542
148 Ga0207706_10000410 3300025933 Bacteria 46041
149 Ga0207686_10007313 3300025934 Bacteria 5944
150 Ga0207704_10011011 3300025938 Bacteria 4437
151 Ga0207665_10015216 3300025939 Bacteria 5053
152 Ga0207711_10007374 3300025941 Bacteria 9205
153 Ga0207711_10298173 3300025941 Bacteria 1486
154 Ga0207689_10010882 3300025942 Bacteria 7823
155 Ga0207689_10037172 3300025942 Bacteria 4040
156 Ga0207661_10025878 3300025944 Bacteria 4465
157 Ga0207667_10005383 3300025949 Bacteria 15604
158 Ga0207667_10014444 3300025949 Bacteria 9003
159 Ga0207712_10011125 3300025961 Bacteria 5727
160 Ga0207640_10003375 3300025981 Bacteria 8602
161 Ga0207677_10014181 3300026023 Bacteria 4645
162 Ga0207703_10004519 3300026035 Bacteria 11413
163 Ga0207702_10000219 3300026078 Bacteria 66719
164 Ga0207641_10079929 3300026088 Bacteria 2836
165 Ga0207648_10006992 3300026089 Bacteria 11157
166 Ga0207676_10081482 3300026095 Bacteria 2630
167 Ga0207674_10014473 3300026116 Bacteria 8710
168 Ga0207675_100019859 3300026118 Bacteria 6270
169 Ga0207683_10042227 3300026121 Bacteria 3982
170 Ga0207698_10061231 3300026142 Unclassified 2932
171 Ga0268266_10064197 3300028379 Bacteria 3172
172 Ga0268264_10021085 3300028381 Bacteria 5325
173 Ga0265338_10003543 3300028800 Bacteria 21848
174 Ga0265762_1000114 3300030760 Bacteria 11961
175 Ga0265339_10003820 3300031249 Bacteria 10468
176 Ga0265339_10033175 3300031249 Unclassified 2909
177 Ga0307409_100067202 3300031995 Bacteria 2830
178 Ga0373936_0022734 3300035113 Bacteria 2441
179 Ga0373936_0026729 3300035113 Bacteria 2261
180 Ga0373935_0187323 3300035692 Unclassified 1424
181 Ga0373947_0008182 3300035725 Bacteria 6029
182 Ga0373947_0016657 3300035725 Bacteria 4223
183 Ga0373937_0013309 3300036401 Bacteria 7248
184 Ga0373925_0083046 3300037068 Bacteria 2439
185 Ga0373925_0266723 3300037068 Unclassified 1376
186 Ga0395905_0005225 3300037471 Bacteria 13288
187 Ga0395905_0063363 3300037471 Unclassified 3459
188 Ga0395901_0353725 3300038443 Bacteria 1516
189 Ga0451577_0204507 3300042876 Unclassified 1782
190 Ga0466961_0080906 3300044693 Bacteria 2056
191 Ga0466967_0013399 3300045976 Bacteria 6334
192 Ga0466967_0027574 3300045976 Bacteria 4726
193 Ga0466967_0044209 3300045976 Bacteria 3862
194 Ga0495629_0065736 3300046459 Unclassified 2531
195 Ga0495580_0000285 3300046472 Bacteria 41012
196 Ga0495580_0002485 3300046472 Bacteria 16095
197 Ga0495580_0005768 3300046472 Bacteria 10168
198 Ga0495580_0069621 3300046472 Bacteria 2458
199 Ga0495582_0000532 3300046473 Bacteria 21082
200 Ga0495684_0198109 3300047471 Unclassified 1482
201 Ga0496101_0154154 3300048904 Bacteria 1759
202 Ga0496102_0006608 3300048905 Bacteria 9907
203 Ga0496102_0014836 3300048905 Bacteria 6778
204 Ga0496102_0194008 3300048905 Bacteria 1914
205 Ga0496103_0001622 3300048906 Bacteria 14765
206 Ga0496104_0042596 3300048907 Bacteria 4261
207 Ga0496107_0059502 3300048910 Bacteria 2765
208 Ga0496111_0132777 3300048914 Bacteria 1843
209 Ga0496112_0018008 3300048915 Bacteria 6648
210 Ga0496112_0044374 3300048915 Bacteria 4355
211 Ga0496115_0115193 3300048918 Bacteria 2210
212 nmdc:mga0n895_626_c1 3300050512 Bacteria 24579
213 nmdc:mga0rr50_215709_c1 3300050513 Unclassified 1583
214 nmdc:mga08x19_55487_c1 3300050514 Bacteria 2554
215 nmdc:mga0a205_219036_c1 3300050515 Unclassified 1790
216 Ga0105238_10139890
217 Ga0070683_100047148
218 Ga0068869_100009093
219 Ga0070680_100001654
220 Ga0070680_100112228
221 Ga0068868_100014126
222 Ga0068868_100034151
223 Ga0068868_100080273
224 Ga0070660_100197711
225 Ga0070691_10047367
226 Ga0070709_10007751
227 Ga0070709_10010380
228 Ga0070714_100002296
229 Ga0070714_100059710
230 Ga0070714_100073923
231 Ga0070713_100033353
232 Ga0070713_100108729
233 Ga0070713_100158758
234 Ga0070713_100186281
235 Ga0070711_100002888
236 Ga0070711_100038688
237 Ga0070708_100004189
238 Ga0070708_100045155
239 Ga0070678_100044556
240 Ga0070681_10000547
241 Ga0070681_10017024
242 Ga0068867_100007199
243 Ga0070706_100006206
244 Ga0070706_100040522
245 Ga0070706_100070269
246 Ga0070707_100001743
247 Ga0070698_100001966
248 Ga0070699_100108947
249 Ga0070699_100126639
250 Ga0070679_100067275
251 Ga0070697_100009058
252 Ga0068853_100301322
253 Ga0070695_100125025
254 Ga0070693_100107583
255 Ga0070665_100014166
256 Ga0068855_100000212
257 Ga0068855_100209187
258 Ga0068857_100008874
259 Ga0068854_100001555
260 Ga0068856_100001039
261 Ga0068856_100003270
262 Ga0068856_100026304
263 Ga0068856_100045211
264 Ga0068859_100015506
265 Ga0068859_100020852
266 Ga0068861_100086872
267 Ga0068863_100081715
268 Ga0068858_100000430
269 Ga0068860_100050896
270 Ga0070717_10004704
271 Ga0070717_10013821
272 Ga0070717_10042250
273 Ga0070717_10072185
274 Ga0070716_100017383
275 Ga0070712_100019385
276 Ga0070712_100047790
277 Ga0097621_100002485
278 Ga0068871_100005060
279 Ga0068871_100119044
280 Ga0068871_100130581
281 Ga0075433_10197257
282 Ga0075434_100003353
283 Ga0068865_100016049
284 Ga0075436_100009109
285 Ga0075436_100063442
286 Ga0097620_100015506
287 Ga0097620_100020853
288 Ga0099794_10023484
289 Ga0105240_10023686
290 Ga0105240_10122304
291 Ga0105247_10024641
292 Ga0105241_10004983
293 Ga0105241_10021828
294 Ga0105241_10076182
295 Ga0105241_10193234
296 Ga0105248_10083202
297 Ga0105237_10038417
298 Ga0105237_10061581
299 Ga0105237_10073480
300 Ga0105237_10118180
301 Ga0105237_10390248
302 Ga0105238_10000064
303 Ga0105238_10019565
304 Ga0105249_10006163
305 Ga0105239_10029786
306 Ga0105239_10033917
307 Ga0105246_10060694
308 Ga0157373_10006902
309 Ga0157371_10024233
310 Ga0157370_10023273
311 Ga0157370_10131137
312 Ga0157370_10187968
313 Ga0157369_10000506
314 Ga0157369_10013281
315 Ga0157369_10128228
316 Ga0157374_10001714
317 Ga0157374_10007674
318 Ga0157374_10012446
319 Ga0157378_10128127
320 Ga0163162_10012866
321 Ga0163162_10016726
322 Ga0157372_10000378
323 Ga0157372_10004481
324 Ga0157372_10014447
325 Ga0157372_10014483
326 Ga0157372_10028054
327 Ga0157372_10038635
328 Ga0157372_10099032
329 Ga0157372_10182476
330 Ga0157372_10213503
331 Ga0157375_10015231
332 Ga0163163_10033445
333 Ga0163163_10143762
334 Ga0163163_10224064
335 Ga0157379_10003088
336 Ga0157376_10124753
337 Ga0207699_10114446
338 Ga0207684_10003177
339 Ga0207684_10081653
340 Ga0207684_10194805
341 Ga0207707_10000842
342 Ga0207707_10001752
343 Ga0207707_10004837
344 Ga0207707_10015913
345 Ga0207695_10036349
346 Ga0207695_10088954
347 Ga0207695_10111728
348 Ga0207671_10021299
349 Ga0207671_10165614
350 Ga0207693_10020095
351 Ga0207693_10033422
352 Ga0207663_10039896
353 Ga0207663_10055567
354 Ga0207657_10000878
355 Ga0207652_10003576
356 Ga0207652_10005463
357 Ga0207646_10007192
358 Ga0207694_10001302
359 Ga0207687_10001613
360 Ga0207700_10186110
361 Ga0207664_10000369
362 Ga0207664_10251589
363 Ga0207706_10000410
364 Ga0207686_10007313
365 Ga0207704_10011011
366 Ga0207665_10015216
367 Ga0207711_10007374
368 Ga0207711_10298173
369 Ga0207689_10010882
370 Ga0207689_10037172
371 Ga0207661_10025878
372 Ga0207667_10005383
373 Ga0207667_10014444
374 Ga0207712_10011125
375 Ga0207640_10003375
376 Ga0207677_10014181
377 Ga0207703_10004519
378 Ga0207702_10000219
379 Ga0207641_10079929
380 Ga0207648_10006992
381 Ga0207676_10081482
382 Ga0207674_10014473
383 Ga0207675_100019859
384 Ga0207683_10042227
385 Ga0207698_10061231
386 Ga0268266_10064197
387 Ga0268264_10021085
388 Ga0265338_10003543
389 Ga0265762_1000114
390 Ga0265339_10003820
391 Ga0265339_10033175
392 Ga0307409_100067202
393 Ga0373936_0022734
394 Ga0373936_0026729
395 Ga0373935_0187323
396 Ga0373947_0008182
397 Ga0373947_0016657
398 Ga0373937_0013309
399 Ga0373925_0083046
400 Ga0373925_0266723
401 Ga0395905_0005225
402 Ga0395905_0063363
403 Ga0395901_0353725
404 Ga0451577_0204507
405 Ga0466961_0080906
406 Ga0466967_0013399
407 Ga0466967_0027574
408 Ga0466967_0044209
409 Ga0495629_0065736
410 Ga0495580_0000285
411 Ga0495580_0002485
412 Ga0495580_0005768
413 Ga0495580_0069621
414 Ga0495582_0000532
415 Ga0495684_0198109
416 Ga0496101_0154154
417 Ga0496102_0006608
418 Ga0496102_0014836
419 Ga0496102_0194008
420 Ga0496103_0001622
421 Ga0496104_0042596
422 Ga0496107_0059502
423 Ga0496111_0132777
424 Ga0496112_0018008
425 Ga0496112_0044374
426 Ga0496115_0115193
427 nmdc:mga0n895_626_c1
428 nmdc:mga0rr50_215709_c1
429 nmdc:mga08x19_55487_c1
430 nmdc:mga0a205_219036_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00144

Beta-lactamase

Beta-lactamase

42

392

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4p6b-assembly1.cif.gz_A crystal structure of est-y29,a novel penicillin-binding protein/beta-lactamase homolog from a metagenomic library 0.8328 50 391
7u1c-assembly1.cif.gz_A structure of estg crystalized with so4 and tris 0.831 45 392
4p6b-assembly1.cif.gz_B crystal structure of est-y29,a novel penicillin-binding protein/beta-lactamase homolog from a metagenomic library 0.8297 50 391
5zwr-assembly1.cif.gz_A structural basis for the enantioselectivity of est-y29 toward (s)-ketoprofen 0.8284 50 391
4p85-assembly1.cif.gz_A crystal structure of est-y29, a novel penicillin-binding protein/beta-lactamase homolog from a metagenomic library 0.8273 50 391
ID Description Score Start End Superfamily
af_Q8T2U3_27_449_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9046 45 395 3.40.710.10
af_P77619_23_410_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8845 44 384 3.40.710.10
af_Q58403_4_217_3.30.2290.10 Alpha Beta;2-Layer Sandwich;PmbA/TldD fold;PmbA/TldD superfamily 0.8795 65 84 3.30.2290.10
af_P72041_31_410_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8305 46 393 3.40.710.10
4p6bB00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8297 50 391 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A2V9YQ16-F1-model_v4 Beta-lactamase-related domain-containing protein 0.99 98 396 GO:0016787
AF-A0A2W0BNY0-F1-model_v4 Serine hydrolase 0.9897 49 395 GO:0016787
AF-A0A2V9W2N0-F1-model_v4 Beta-lactamase-related domain-containing protein 0.9882 40 396 GO:0016787
AF-A0A3M1A4Y1-F1-model_v4 beta-N-acetylhexosaminidase (EC 3.2.1.52) 0.9765 45 392 GO:0004553
GO:0005975
GO:0009254
AF-A0A382YKM6-F1-model_v4 Beta-lactamase-related domain-containing protein 0.9723 152 393 GO:0016787

Map