F326105

General Info

Members Datasets Scaffolds Average Seq Length
215 133 430 318

Family's Representative Sequence

Representative Sequence 3300005366|Ga0070659_100352116|Ga0070659_1003521161
Length 312
Sequence MRNWVAAFAAMCLLASCGGTKQTGAKKYLVAFSQCNNAEPYRAAQNALMAKLFGEQRDVELVIADAQQDNSKQVAQIEAFIRQKPDLLIVAPNERAPLTEVMGRAYRSGIPVICLERDILQPNYTTYIKADNHKIGEMAGNFIVDYLKKNGSPRGNIVELRGLLGVEGEINRYAGAHEVFSKYPGIKVVHEAVADWIQAKAKDRMTEALRAQPKIDVVYAHNDPMAVGAYLAARELGREKEMIFVGIDGLSGPGGGIEKVHDGVLAATFVYPLCVDKAVEIGSRILHDSNFKPEKTYTMESVLVTPDTKLPR

Samples

Sample ID Description Type Environment
1 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
72 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
73 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
87 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
88 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
89 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
90 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
91 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
95 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
96 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
101 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
102 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
103 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
110 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
111 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
112 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 96.74
Stem 0
Stem Tuber 0
Unclassified 9.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070659_100352116 3300005366 Unclassified 1235
2 Ga0070683_100327163 3300005329 Unclassified 1459
3 Ga0070670_100214009 3300005331 Bacteria 1676
4 Ga0070689_100360780 3300005340 Bacteria 1221
5 Ga0070661_100288188 3300005344 Bacteria 1275
6 Ga0070667_100000046 3300005367 Bacteria 162942
7 Ga0070713_100279896 3300005436 Bacteria 1530
8 Ga0070678_100429431 3300005456 Bacteria 1153
9 Ga0070681_10312882 3300005458 Bacteria 1480
10 Ga0070684_100000038 3300005535 Bacteria 94959
11 Ga0070684_100122610 3300005535 Bacteria 2339
12 Ga0068853_100011962 3300005539 Bacteria 7058
13 Ga0070665_100044018 3300005548 Bacteria 4484
14 Ga0070665_100124287 3300005548 Bacteria 2582
15 Ga0068855_100024964 3300005563 Bacteria 7153
16 Ga0068855_100034651 3300005563 Bacteria 6017
17 Ga0068856_100025602 3300005614 Bacteria 5753
18 Ga0068859_100109544 3300005617 Bacteria 2823
19 Ga0068859_100341233 3300005617 Bacteria 1592
20 Ga0068859_100483929 3300005617 Bacteria 1333
21 Ga0081455_10086605 3300005937 Bacteria 2551
22 Ga0070717_10007090 3300006028 Bacteria 8303
23 Ga0070712_100153757 3300006175 Bacteria 1769
24 Ga0097621_100001944 3300006237 Bacteria 14088
25 Ga0097621_100020732 3300006237 Bacteria 5070
26 Ga0068871_100000746 3300006358 Bacteria 22033
27 Ga0068871_100298769 3300006358 Unclassified 1413
28 Ga0068865_100034462 3300006881 Bacteria 3397
29 Ga0097620_100109545 3300006931 Bacteria 2823
30 Ga0097620_100341223 3300006931 Bacteria 1592
31 Ga0097620_100484009 3300006931 Bacteria 1333
32 Ga0105250_10059315 3300009092 Bacteria 1537
33 Ga0105240_10001541 3300009093 Bacteria 39132
34 Ga0105240_10003233 3300009093 Bacteria 25510
35 Ga0105240_10005902 3300009093 Bacteria 18137
36 Ga0105240_10009238 3300009093 Bacteria 13988
37 Ga0105240_10022542 3300009093 Bacteria 8345
38 Ga0105240_10047973 3300009093 Bacteria 5401
39 Ga0105240_10106046 3300009093 Bacteria 3410
40 Ga0105240_10109626 3300009093 Bacteria 3343
41 Ga0105247_10030666 3300009101 Bacteria 3260
42 Ga0105242_10378839 3300009176 Bacteria 1315
43 Ga0105248_10073187 3300009177 Bacteria 3851
44 Ga0105248_10118491 3300009177 Bacteria 2986
45 Ga0105248_10145121 3300009177 Unclassified 2678
46 Ga0105248_10151830 3300009177 Bacteria 2613
47 Ga0105248_10251264 3300009177 Bacteria 1990
48 Ga0105237_10005820 3300009545 Bacteria 13829
49 Ga0105237_10065908 3300009545 Bacteria 3617
50 Ga0105237_10231642 3300009545 Bacteria 1848
51 Ga0105249_10578022 3300009553 Bacteria 1177
52 Ga0105239_10001842 3300010375 Bacteria 27755
53 Ga0105239_10159640 3300010375 Bacteria 2518
54 Ga0105239_10235582 3300010375 Bacteria 2054
55 Ga0157373_10041300 3300013100 Bacteria 3299
56 Ga0157369_10003873 3300013105 Bacteria 17770
57 Ga0157374_10023804 3300013296 Bacteria 5483
58 Ga0157374_10026911 3300013296 Bacteria 5180
59 Ga0157378_10003369 3300013297 Bacteria 14210
60 Ga0163162_10105902 3300013306 Bacteria 2906
61 Ga0157372_10001424 3300013307 Bacteria 25823
62 Ga0163163_10012441 3300014325 Bacteria 7751
63 Ga0163163_10023067 3300014325 Bacteria 5901
64 Ga0163163_10318361 3300014325 Bacteria 1609
65 Ga0163163_10550083 3300014325 Unclassified 1217
66 Ga0157379_10076949 3300014968 Bacteria 2988
67 Ga0157379_10083794 3300014968 Unclassified 2857
68 Ga0157376_10293177 3300014969 Bacteria 1537
69 Ga0224572_1023728 3300024225 Bacteria 1178
70 Ga0207710_10017566 3300025900 Bacteria 3034
71 Ga0207680_10099469 3300025903 Unclassified 1866
72 Ga0207680_10218325 3300025903 Bacteria 1306
73 Ga0207695_10002274 3300025913 Bacteria 28782
74 Ga0207695_10003228 3300025913 Bacteria 23199
75 Ga0207695_10005781 3300025913 Bacteria 16284
76 Ga0207695_10015057 3300025913 Bacteria 9125
77 Ga0207695_10046753 3300025913 Bacteria 4585
78 Ga0207695_10063569 3300025913 Bacteria 3804
79 Ga0207695_10276822 3300025913 Bacteria 1572
80 Ga0207671_10022560 3300025914 Bacteria 4757
81 Ga0207693_10122905 3300025915 Bacteria 2039
82 Ga0207649_10217342 3300025920 Bacteria 1359
83 Ga0207694_10286701 3300025924 Bacteria 1353
84 Ga0207687_10033056 3300025927 Unclassified 3507
85 Ga0207700_10206973 3300025928 Bacteria 1656
86 Ga0207690_10319204 3300025932 Unclassified 1221
87 Ga0207670_10064248 3300025936 Bacteria 2515
88 Ga0207711_10080773 3300025941 Bacteria 2840
89 Ga0207711_10125214 3300025941 Unclassified 2298
90 Ga0207661_10000049 3300025944 Bacteria 93797
91 Ga0207661_10130620 3300025944 Unclassified 2151
92 Ga0207667_10010544 3300025949 Bacteria 10796
93 Ga0207667_10038707 3300025949 Bacteria 5089
94 Ga0207712_10133107 3300025961 Bacteria 1897
95 Ga0207640_10067942 3300025981 Unclassified 2387
96 Ga0207658_10000058 3300025986 Bacteria 122331
97 Ga0207658_10056115 3300025986 Unclassified 2922
98 Ga0207703_10040714 3300026035 Bacteria 3720
99 Ga0207703_10102131 3300026035 Unclassified 2433
100 Ga0207639_10008445 3300026041 Bacteria 7058
101 Ga0207702_10002903 3300026078 Bacteria 16043
102 Ga0207676_10340734 3300026095 Bacteria 1383
103 Ga0207674_10270529 3300026116 Bacteria 1647
104 Ga0207683_10467865 3300026121 Unclassified 1163
105 Ga0207698_10197926 3300026142 Bacteria 1797
106 Ga0268266_10037563 3300028379 Bacteria 4124
107 Ga0268266_10420670 3300028379 Unclassified 1266
108 Ga0265318_10013914 3300028577 Bacteria 3388
109 Ga0265320_10030309 3300031240 Bacteria 2790
110 Ga0265339_10048846 3300031249 Bacteria 2319
111 Ga0265316_10018576 3300031344 Bacteria 5971
112 Ga0265314_10046695 3300031711 Bacteria 3054
113 Ga0373926_0027994 3300035083 Bacteria 1977
114 Ga0373934_0006232 3300035086 Unclassified 4421
115 Ga0373956_0052871 3300035119 Bacteria 1828
116 Ga0373927_0000417 3300035695 Bacteria 32693
117 Ga0373927_0005744 3300035695 Bacteria 8521
118 Ga0373927_0227450 3300035695 Bacteria 1225
119 Ga0373933_0181267 3300035724 Bacteria 1343
120 Ga0373947_0014367 3300035725 Bacteria 4542
121 Ga0373937_0248450 3300036401 Unclassified 1677
122 Ga0373937_0343427 3300036401 Bacteria 1414
123 Ga0373937_0394070 3300036401 Bacteria 1314
124 Ga0373925_0000620 3300037068 Bacteria 33864
125 Ga0373925_0092893 3300037068 Bacteria 2309
126 Ga0373925_0213759 3300037068 Bacteria 1537
127 Ga0373925_0236904 3300037068 Bacteria 1460
128 Ga0436364_0365852 3300037853 Bacteria 3723
129 Ga0436364_0366043 3300037853 Unclassified 2989
130 Ga0436364_0423642 3300037853 Bacteria 2328
131 Ga0436364_1360829 3300037853 Bacteria 5065
132 Ga0436360_0670196 3300039438 Bacteria 2109
133 Ga0436363_0039905 3300039450 Bacteria 2261
134 Ga0436363_1312466 3300039450 Bacteria 1488
135 Ga0436362_0312371 3300039453 Bacteria 1146
136 Ga0451577_0412468 3300042876 Bacteria 1226
137 Ga0451576_0712964 3300045051 Bacteria 1054
138 Ga0495651_0005611 3300046462 Bacteria 9565
139 Ga0495651_0007804 3300046462 Bacteria 8191
140 Ga0495580_0004050 3300046472 Bacteria 12364
141 Ga0495662_0061315 3300046476 Bacteria 1817
142 Ga0495664_0047762 3300046477 Bacteria 2541
143 Ga0495583_0009292 3300046506 Bacteria 5889
144 Ga0495608_0265664 3300046511 Bacteria 1067
145 Ga0495618_0025706 3300046514 Bacteria 3656
146 Ga0495628_0006192 3300046516 Bacteria 10466
147 Ga0495628_0056962 3300046516 Bacteria 3075
148 Ga0495628_0103661 3300046516 Bacteria 2193
149 Ga0495630_0009017 3300046517 Bacteria 7168
150 Ga0495630_0088657 3300046517 Bacteria 2337
151 Ga0495652_0008332 3300046529 Bacteria 9471
152 Ga0495665_0077274 3300046531 Bacteria 1752
153 Ga0495640_0054460 3300046533 Bacteria 2740
154 Ga0495640_0067110 3300046533 Bacteria 2417
155 Ga0495640_0105717 3300046533 Bacteria 1844
156 Ga0495645_0006002 3300046543 Bacteria 8399
157 Ga0495645_0039411 3300046543 Bacteria 3446
158 Ga0495645_0211369 3300046543 Bacteria 1310
159 Ga0495667_0019228 3300046559 Bacteria 4609
160 Ga0495667_0020208 3300046559 Bacteria 4493
161 Ga0495667_0072277 3300046559 Bacteria 2249
162 Ga0495634_0006629 3300046642 Bacteria 8786
163 Ga0495635_0009693 3300046663 Bacteria 6733
164 Ga0495657_0207753 3300046675 Bacteria 1191
165 Ga0495599_0004497 3300046678 Bacteria 8263
166 Ga0495623_0038770 3300046679 Bacteria 3047
167 Ga0495623_0142545 3300046679 Bacteria 1424
168 Ga0495613_0016661 3300046689 Bacteria 5471
169 Ga0495613_0035101 3300046689 Bacteria 3723
170 Ga0495624_0085209 3300046690 Unclassified 1952
171 Ga0495604_0027452 3300047317 Bacteria 4528
172 Ga0495604_0081532 3300047317 Bacteria 2422
173 Ga0495674_0000493 3300047319 Bacteria 36004
174 Ga0495674_0011378 3300047319 Bacteria 8398
175 Ga0495674_0146367 3300047319 Bacteria 1983
176 Ga0495674_0189506 3300047319 Bacteria 1710
177 Ga0495680_0015736 3300047322 Bacteria 6515
178 Ga0495680_0092496 3300047322 Bacteria 2265
179 Ga0495675_0043577 3300047444 Bacteria 2859
180 Ga0495675_0044395 3300047444 Bacteria 2832
181 Ga0495684_0010196 3300047471 Bacteria 7268
182 Ga0495684_0011776 3300047471 Bacteria 6749
183 Ga0495684_0014204 3300047471 Bacteria 6127
184 Ga0495684_0023030 3300047471 Bacteria 4790
185 Ga0495602_0054768 3300048088 Bacteria 3518
186 Ga0496120_0000488 3300048923 Bacteria 62050
187 Ga0501034_0181378 3300049571 Bacteria 2070
188 Ga0501036_0004991 3300049572 Bacteria 10733
189 Ga0501036_0109714 3300049572 Bacteria 2332
190 Ga0501037_0013727 3300049573 Bacteria 5966
191 Ga0501037_0238355 3300049573 Bacteria 1275
192 Ga0501038_0007942 3300049574 Bacteria 9777
193 Ga0501043_0113622 3300049579 Bacteria 2126
194 Ga0501046_0000891 3300049580 Bacteria 29094
195 Ga0501046_0299881 3300049580 Bacteria 1174
196 Ga0501047_0025083 3300049581 Bacteria 5727
197 Ga0501047_0162008 3300049581 Bacteria 2108
198 Ga0501048_0008616 3300049582 Bacteria 7701
199 Ga0501067_0026261 3300049583 Bacteria 3226
200 Ga0501068_0000532 3300049584 Bacteria 19226
201 Ga0501069_0004095 3300049585 Bacteria 7521
202 Ga0501070_0024558 3300049586 Bacteria 5054
203 Ga0501070_0053312 3300049586 Bacteria 3355
204 Ga0501072_0000736 3300049588 Bacteria 23875
205 Ga0501073_0010203 3300049589 Bacteria 6899
206 Ga0501074_0041283 3300049590 Unclassified 3340
207 Ga0501074_0335474 3300049590 Bacteria 1073
208 Ga0501077_0002315 3300049593 Bacteria 11463
209 Ga0501079_0008867 3300049741 Bacteria 7614
210 Ga0501080_0002853 3300049742 Bacteria 15188
211 Ga0501035_0008315 3300049822 Bacteria 9664
212 Ga0501044_0069958 3300049823 Bacteria 3571
213 Ga0501044_0158575 3300049823 Bacteria 2241
214 Ga0501082_0000716 3300060353 Bacteria 29168
215 Ga0501082_0037846 3300060353 Bacteria 4160
216 Ga0070659_100352116
217 Ga0070683_100327163
218 Ga0070670_100214009
219 Ga0070689_100360780
220 Ga0070661_100288188
221 Ga0070667_100000046
222 Ga0070713_100279896
223 Ga0070678_100429431
224 Ga0070681_10312882
225 Ga0070684_100000038
226 Ga0070684_100122610
227 Ga0068853_100011962
228 Ga0070665_100044018
229 Ga0070665_100124287
230 Ga0068855_100024964
231 Ga0068855_100034651
232 Ga0068856_100025602
233 Ga0068859_100109544
234 Ga0068859_100341233
235 Ga0068859_100483929
236 Ga0081455_10086605
237 Ga0070717_10007090
238 Ga0070712_100153757
239 Ga0097621_100001944
240 Ga0097621_100020732
241 Ga0068871_100000746
242 Ga0068871_100298769
243 Ga0068865_100034462
244 Ga0097620_100109545
245 Ga0097620_100341223
246 Ga0097620_100484009
247 Ga0105250_10059315
248 Ga0105240_10001541
249 Ga0105240_10003233
250 Ga0105240_10005902
251 Ga0105240_10009238
252 Ga0105240_10022542
253 Ga0105240_10047973
254 Ga0105240_10106046
255 Ga0105240_10109626
256 Ga0105247_10030666
257 Ga0105242_10378839
258 Ga0105248_10073187
259 Ga0105248_10118491
260 Ga0105248_10145121
261 Ga0105248_10151830
262 Ga0105248_10251264
263 Ga0105237_10005820
264 Ga0105237_10065908
265 Ga0105237_10231642
266 Ga0105249_10578022
267 Ga0105239_10001842
268 Ga0105239_10159640
269 Ga0105239_10235582
270 Ga0157373_10041300
271 Ga0157369_10003873
272 Ga0157374_10023804
273 Ga0157374_10026911
274 Ga0157378_10003369
275 Ga0163162_10105902
276 Ga0157372_10001424
277 Ga0163163_10012441
278 Ga0163163_10023067
279 Ga0163163_10318361
280 Ga0163163_10550083
281 Ga0157379_10076949
282 Ga0157379_10083794
283 Ga0157376_10293177
284 Ga0224572_1023728
285 Ga0207710_10017566
286 Ga0207680_10099469
287 Ga0207680_10218325
288 Ga0207695_10002274
289 Ga0207695_10003228
290 Ga0207695_10005781
291 Ga0207695_10015057
292 Ga0207695_10046753
293 Ga0207695_10063569
294 Ga0207695_10276822
295 Ga0207671_10022560
296 Ga0207693_10122905
297 Ga0207649_10217342
298 Ga0207694_10286701
299 Ga0207687_10033056
300 Ga0207700_10206973
301 Ga0207690_10319204
302 Ga0207670_10064248
303 Ga0207711_10080773
304 Ga0207711_10125214
305 Ga0207661_10000049
306 Ga0207661_10130620
307 Ga0207667_10010544
308 Ga0207667_10038707
309 Ga0207712_10133107
310 Ga0207640_10067942
311 Ga0207658_10000058
312 Ga0207658_10056115
313 Ga0207703_10040714
314 Ga0207703_10102131
315 Ga0207639_10008445
316 Ga0207702_10002903
317 Ga0207676_10340734
318 Ga0207674_10270529
319 Ga0207683_10467865
320 Ga0207698_10197926
321 Ga0268266_10037563
322 Ga0268266_10420670
323 Ga0265318_10013914
324 Ga0265320_10030309
325 Ga0265339_10048846
326 Ga0265316_10018576
327 Ga0265314_10046695
328 Ga0373926_0027994
329 Ga0373934_0006232
330 Ga0373956_0052871
331 Ga0373927_0000417
332 Ga0373927_0005744
333 Ga0373927_0227450
334 Ga0373933_0181267
335 Ga0373947_0014367
336 Ga0373937_0248450
337 Ga0373937_0343427
338 Ga0373937_0394070
339 Ga0373925_0000620
340 Ga0373925_0092893
341 Ga0373925_0213759
342 Ga0373925_0236904
343 Ga0436364_0365852
344 Ga0436364_0366043
345 Ga0436364_0423642
346 Ga0436364_1360829
347 Ga0436360_0670196
348 Ga0436363_0039905
349 Ga0436363_1312466
350 Ga0436362_0312371
351 Ga0451577_0412468
352 Ga0451576_0712964
353 Ga0495651_0005611
354 Ga0495651_0007804
355 Ga0495580_0004050
356 Ga0495662_0061315
357 Ga0495664_0047762
358 Ga0495583_0009292
359 Ga0495608_0265664
360 Ga0495618_0025706
361 Ga0495628_0006192
362 Ga0495628_0056962
363 Ga0495628_0103661
364 Ga0495630_0009017
365 Ga0495630_0088657
366 Ga0495652_0008332
367 Ga0495665_0077274
368 Ga0495640_0054460
369 Ga0495640_0067110
370 Ga0495640_0105717
371 Ga0495645_0006002
372 Ga0495645_0039411
373 Ga0495645_0211369
374 Ga0495667_0019228
375 Ga0495667_0020208
376 Ga0495667_0072277
377 Ga0495634_0006629
378 Ga0495635_0009693
379 Ga0495657_0207753
380 Ga0495599_0004497
381 Ga0495623_0038770
382 Ga0495623_0142545
383 Ga0495613_0016661
384 Ga0495613_0035101
385 Ga0495624_0085209
386 Ga0495604_0027452
387 Ga0495604_0081532
388 Ga0495674_0000493
389 Ga0495674_0011378
390 Ga0495674_0146367
391 Ga0495674_0189506
392 Ga0495680_0015736
393 Ga0495680_0092496
394 Ga0495675_0043577
395 Ga0495675_0044395
396 Ga0495684_0010196
397 Ga0495684_0011776
398 Ga0495684_0014204
399 Ga0495684_0023030
400 Ga0495602_0054768
401 Ga0496120_0000488
402 Ga0501034_0181378
403 Ga0501036_0004991
404 Ga0501036_0109714
405 Ga0501037_0013727
406 Ga0501037_0238355
407 Ga0501038_0007942
408 Ga0501043_0113622
409 Ga0501046_0000891
410 Ga0501046_0299881
411 Ga0501047_0025083
412 Ga0501047_0162008
413 Ga0501048_0008616
414 Ga0501067_0026261
415 Ga0501068_0000532
416 Ga0501069_0004095
417 Ga0501070_0024558
418 Ga0501070_0053312
419 Ga0501072_0000736
420 Ga0501073_0010203
421 Ga0501074_0041283
422 Ga0501074_0335474
423 Ga0501077_0002315
424 Ga0501079_0008867
425 Ga0501080_0002853
426 Ga0501035_0008315
427 Ga0501044_0069958
428 Ga0501044_0158575
429 Ga0501082_0000716
430 Ga0501082_0037846

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13407

Peripla_BP_4

Periplasmic binding protein domain

30

272

0.94

PF00532

Peripla_BP_1

Periplasmic binding proteins and sugar binding domain of LacI family

34

266

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qsp-assembly1.cif.gz_A permutated c-terminal lobe of the ribose binding protein from thermotoga maritima 0.9514 153 243
2x7x-assembly1.cif.gz_B fructose binding periplasmic domain of hybrid two component system bt1754 0.919 26 313
2fn9-assembly2.cif.gz_B thermotoga maritima ribose binding protein unliganded form 0.913 27 305
4yo7-assembly1.cif.gz_A crystal structure of an abc transporter solute binding protein (ipr025997) from bacillus halodurans c-125 (bh2323, target efi-511484) with bound myo-inositol 0.9093 23 313
7pu4-assembly1.cif.gz_B crystal structure of the dimer rbp-n and rbp-trunc from thermotoga maritima ribose binding protein 0.9026 153 311
ID Description Score Start End Superfamily
2x7xB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9875 131 271 3.40.50.2300
2x7xB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9663 131 271 3.40.50.2300
5ibqA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9446 130 309 3.40.50.2300
1dbpA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9288 128 269 3.40.50.2300
1gudA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9271 128 304 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A519V312-F1-model_v4 Histidine kinase domain-containing protein 0.9617 41 313 GO:0000155
GO:0016020
AF-A0A2U3KJZ3-F1-model_v4 Periplasmic binding protein/LacI transcriptional regulator 0.9464 18 313 GO:0030246
GO:0030313
AF-A0A2S8MQZ3-F1-model_v4 deleted 0.9463 127 249
AF-A0A6P2ATN1-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.9307 108 311 GO:0030246
GO:0030313
AF-A0A6P0X3D5-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.9299 90 311 GO:0030246
GO:0030313

Map