F325435

General Info

Members Datasets Scaffolds Average Seq Length
214 135 428 513

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0011936|Ga0316582_0011936_2962_4716
Length 584
Sequence MKEVRMTATTWPTPKWPEDVPHDISGYEKPLFSILDESAASYPDLVYTVFNDATRTYAQVKDTADRIAHFLASHGIQKGDRVAIFLPNLPHYPAIFFGILKAGAVCVTCNPLYKANELNYQLKDAGAKVVFCMDHPQFYPTTVEAIRNTDVDTVVICGVKSYLPPIKALIGGLLGKIPKAGNYQAGHLFFDDMVAGAQPKPPEVEINPTEDLALIIYTGGTTGVPKGAALTHSNFTYDLEAILEWIRLVHEPGARPEKTRNGGFHTYLGVLPWYHSFGLTCAMLSSCASGNRLICIPDPRAGHPPFTEVLKVVQKHKPTVMPAVPTIFVAFTNHADLDQYDLSSLMGCFSGGAPLPPEVCRRFEEKTGAVIFEGYGLSETAPVATVNPTNREQRKVGTIGFPIPGTDIKVLDIEGGTTELPRGEDGEIAICGPQVMKGYWNRPEETAEVFRDIEGKRYFLTGDIGHVDEEGYIVITDRKKDLILVGGFNVYPRDVEDILFQHPKVELAAVIGAPDEKSGEAVKAFIQLKPGQTATVEEIIEFSKEKMAGYKRPKYIEFRESLPVSNVGKVLRRVLRDEELKKAK

Samples

Sample ID Description Type Environment
1 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
38 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
39 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
66 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
69 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
70 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
73 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
74 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
75 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
76 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
93 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
104 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
109 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
117 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
118 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
129 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
130 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
131 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
132 2643221615 Nocardioides sp. Root224 Isolate Unclassified
133 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
134 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
135 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.66
Metatranscriptomes 0.47
Isolates 1.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.93
Nodule 0.47
Rhizoplane 3.27
Rhizosphere 87.38
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316582_0011936 3300036647 Bacteria 4828
2 Ga0070683_100061732 3300005329 Bacteria 3485
3 Ga0070692_10030357 3300005345 Bacteria 2702
4 Ga0070675_100001942 3300005354 Bacteria 15299
5 Ga0070659_100037516 3300005366 Bacteria 3778
6 Ga0070709_10000759 3300005434 Bacteria 18219
7 Ga0070709_10011091 3300005434 Bacteria 5011
8 Ga0070714_100000470 3300005435 Bacteria 29292
9 Ga0070714_100002892 3300005435 Bacteria 12708
10 Ga0070714_100003792 3300005435 Bacteria 11345
11 Ga0070714_100020618 3300005435 Bacteria 5386
12 Ga0070714_100073864 3300005435 Bacteria 2955
13 Ga0070713_100001573 3300005436 Bacteria 14603
14 Ga0070713_100030992 3300005436 Bacteria 4253
15 Ga0070713_100050521 3300005436 Bacteria 3435
16 Ga0070713_100160333 3300005436 Bacteria 2007
17 Ga0070710_10000494 3300005437 Bacteria 18559
18 Ga0070710_10000642 3300005437 Bacteria 16650
19 Ga0070711_100013780 3300005439 Bacteria 5084
20 Ga0070700_100019901 3300005441 Bacteria 3879
21 Ga0070708_100001833 3300005445 Bacteria 16294
22 Ga0070663_100032718 3300005455 Bacteria 3587
23 Ga0070662_100041036 3300005457 Bacteria 3299
24 Ga0070706_100000535 3300005467 Bacteria 44191
25 Ga0070706_100002700 3300005467 Bacteria 17756
26 Ga0070706_100008259 3300005467 Bacteria 9710
27 Ga0070706_100017472 3300005467 Bacteria 6620
28 Ga0070706_100059146 3300005467 Bacteria 3537
29 Ga0070706_100100990 3300005467 Bacteria 2681
30 Ga0070707_100001203 3300005468 Bacteria 25448
31 Ga0070707_100007029 3300005468 Bacteria 10441
32 Ga0070707_100016671 3300005468 Bacteria 6896
33 Ga0070707_100064022 3300005468 Bacteria 3530
34 Ga0070698_100000167 3300005471 Bacteria 60583
35 Ga0070698_100001558 3300005471 Bacteria 25448
36 Ga0070698_100002267 3300005471 Bacteria 21282
37 Ga0070698_100005949 3300005471 Bacteria 13308
38 Ga0070684_100074486 3300005535 Bacteria 2993
39 Ga0070697_100015715 3300005536 Bacteria 5943
40 Ga0070665_100211392 3300005548 Bacteria 1941
41 Ga0068854_100031897 3300005578 Bacteria 3663
42 Ga0068860_100038587 3300005843 Bacteria 4570
43 Ga0081540_1034816 3300005983 Bacteria 2708
44 Ga0070717_10005039 3300006028 Bacteria 9622
45 Ga0070717_10016442 3300006028 Bacteria 5736
46 Ga0070717_10093988 3300006028 Bacteria 2536
47 Ga0070717_10209944 3300006028 Bacteria 1708
48 Ga0070715_10032397 3300006163 Bacteria 2129
49 Ga0070716_100000192 3300006173 Bacteria 24137
50 Ga0070716_100009461 3300006173 Bacteria 4860
51 Ga0070712_100001218 3300006175 Bacteria 15564
52 Ga0070712_100025151 3300006175 Bacteria 3954
53 Ga0075430_100000856 3300006846 Bacteria 23866
54 Ga0075433_10065232 3300006852 Bacteria 3194
55 Ga0075433_10194259 3300006852 Bacteria 1805
56 Ga0075434_100011103 3300006871 Bacteria 8477
57 Ga0075436_100024021 3300006914 Bacteria 4189
58 Ga0111539_10029460 3300009094 Bacteria 6685
59 Ga0105245_10030222 3300009098 Bacteria 4790
60 Ga0163163_10001808 3300014325 Bacteria 18036
61 Ga0163163_10396700 3300014325 Bacteria 1438
62 Ga0206353_10104667 3300020082 Bacteria 4436
63 Ga0213875_10000592 3300021388 Bacteria 29287
64 Ga0213875_10000745 3300021388 Bacteria 24615
65 Ga0224572_1003272 3300024225 Bacteria 2722
66 Ga0228598_1007375 3300024227 Bacteria 2242
67 Ga0207692_10000632 3300025898 Bacteria 12378
68 Ga0207692_10005852 3300025898 Bacteria 4954
69 Ga0207688_10008944 3300025901 Bacteria 5449
70 Ga0207685_10000657 3300025905 Bacteria 6151
71 Ga0207685_10009576 3300025905 Bacteria 2820
72 Ga0207699_10001105 3300025906 Bacteria 12742
73 Ga0207699_10053726 3300025906 Bacteria 2390
74 Ga0207684_10025938 3300025910 Bacteria 4996
75 Ga0207684_10042294 3300025910 Bacteria 3862
76 Ga0207684_10105855 3300025910 Bacteria 2406
77 Ga0207693_10000354 3300025915 Bacteria 42162
78 Ga0207693_10002463 3300025915 Bacteria 16087
79 Ga0207693_10039643 3300025915 Bacteria 3709
80 Ga0207693_10111709 3300025915 Bacteria 2144
81 Ga0207663_10003613 3300025916 Bacteria 7594
82 Ga0207663_10010641 3300025916 Bacteria 4906
83 Ga0207646_10001784 3300025922 Bacteria 26072
84 Ga0207646_10009513 3300025922 Bacteria 9599
85 Ga0207646_10020020 3300025922 Bacteria 6206
86 Ga0207646_10020533 3300025922 Bacteria 6119
87 Ga0207659_10010723 3300025926 Bacteria 5763
88 Ga0207700_10010540 3300025928 Bacteria 5840
89 Ga0207700_10018386 3300025928 Bacteria 4693
90 Ga0207700_10019687 3300025928 Bacteria 4564
91 Ga0207664_10002202 3300025929 Bacteria 12839
92 Ga0207664_10007990 3300025929 Bacteria 7355
93 Ga0207664_10018685 3300025929 Bacteria 5109
94 Ga0207664_10022239 3300025929 Bacteria 4731
95 Ga0207690_10016985 3300025932 Bacteria 4437
96 Ga0207706_10067138 3300025933 Bacteria 3156
97 Ga0207665_10000042 3300025939 Bacteria 82783
98 Ga0207679_10021821 3300025945 Bacteria 4349
99 Ga0207677_10012497 3300026023 Bacteria 4884
100 Ga0207703_10128379 3300026035 Bacteria 2186
101 Ga0207708_10048852 3300026075 Bacteria 3221
102 Ga0207641_10120399 3300026088 Bacteria 2341
103 Ga0207676_10010962 3300026095 Bacteria 6470
104 Ga0207674_10140646 3300026116 Bacteria 2373
105 Ga0268266_10169676 3300028379 Bacteria 1980
106 Ga0268266_10197078 3300028379 Bacteria 1842
107 Ga0268264_10093155 3300028381 Bacteria 2602
108 Ga0268264_10192585 3300028381 Bacteria 1860
109 Ga0307512_10036111 3300030522 Bacteria 4197
110 Ga0265330_10027740 3300031235 Bacteria 2557
111 Ga0307508_10076094 3300031616 Bacteria 2934
112 Ga0316575_10000199 3300031665 Bacteria 15979
113 Ga0316579_10003238 3300031691 Bacteria 6309
114 Ga0316576_10001127 3300031727 Bacteria 14014
115 Ga0316576_10001423 3300031727 Bacteria 12815
116 Ga0316576_10007176 3300031727 Bacteria 6989
117 Ga0316576_10025927 3300031727 Bacteria 4107
118 Ga0316578_10000425 3300031728 Bacteria 13851
119 Ga0316578_10011562 3300031728 Bacteria 4624
120 Ga0316578_10018433 3300031728 Bacteria 3826
121 Ga0316577_10017267 3300031733 Bacteria 3982
122 Ga0316577_10021672 3300031733 Bacteria 3566
123 Ga0307518_10053815 3300031838 Bacteria 2925
124 Ga0307415_100020489 3300032126 Bacteria 4039
125 Ga0307415_100036117 3300032126 Bacteria 3235
126 Ga0307415_100046850 3300032126 Bacteria 2907
127 Ga0316583_10005077 3300032133 Bacteria 4712
128 Ga0373939_0002758 3300035114 Bacteria 4118
129 Ga0373957_0001254 3300035120 Bacteria 6793
130 Ga0373957_0002463 3300035120 Bacteria 5291
131 Ga0373960_0005483 3300035121 Bacteria 2942
132 Ga0373955_0015604 3300035172 Bacteria 3723
133 Ga0316574_0002828 3300035398 Bacteria 8797
134 Ga0373935_0004111 3300035692 Bacteria 8516
135 Ga0373935_0006936 3300035692 Bacteria 6761
136 Ga0373935_0164751 3300035692 Bacteria 1513
137 Ga0373933_0000337 3300035724 Bacteria 30069
138 Ga0373937_0007570 3300036401 Bacteria 9404
139 Ga0373937_0009820 3300036401 Bacteria 8345
140 Ga0373937_0020111 3300036401 Bacteria 5981
141 Ga0373937_0076246 3300036401 Bacteria 3096
142 Ga0316582_0000652 3300036647 Bacteria 13569
143 Ga0316582_0004172 3300036647 Bacteria 7243
144 Ga0316582_0040684 3300036647 Bacteria 2902
145 Ga0316582_0061427 3300036647 Bacteria 2410
146 Ga0316582_0062605 3300036647 Bacteria 2389
147 Ga0316584_0003431 3300036712 Bacteria 10289
148 Ga0316584_0015708 3300036712 Bacteria 5419
149 Ga0316584_0045386 3300036712 Bacteria 3280
150 Ga0373925_0066646 3300037068 Bacteria 2714
151 Ga0316581_0018698 3300037588 Bacteria 2015
152 Ga0436364_1183580 3300037853 Bacteria 21689
153 Ga0436364_1223233 3300037853 Bacteria 42179
154 Ga0400488_14556 3300038741 Bacteria 7320
155 Ga0400488_56089 3300038741 Bacteria 3315
156 Ga0436365_0647117 3300039437 Bacteria 4212
157 Ga0451804_0822275 3300041463 Bacteria 1658
158 Ga0466961_0025563 3300044693 Bacteria 3797
159 Ga0466968_0022014 3300044735 Bacteria 2587
160 Ga0466970_0025338 3300044765 Bacteria 3105
161 Ga0466959_0025238 3300045049 Bacteria 4404
162 Ga0466959_0033391 3300045049 Bacteria 3805
163 Ga0495592_0030677 3300046454 Bacteria 4066
164 Ga0495641_0012244 3300046461 Bacteria 4812
165 Ga0495651_0011092 3300046462 Bacteria 6929
166 Ga0495651_0019026 3300046462 Bacteria 5321
167 Ga0495651_0027988 3300046462 Bacteria 4393
168 Ga0495653_0145492 3300046463 Bacteria 1661
169 Ga0495662_0004881 3300046476 Bacteria 6720
170 Ga0495662_0017742 3300046476 Bacteria 3447
171 Ga0495664_0050771 3300046477 Bacteria 2462
172 Ga0495608_0062458 3300046511 Bacteria 2447
173 Ga0495652_0126622 3300046529 Bacteria 2028
174 Ga0495640_0013253 3300046533 Bacteria 6269
175 Ga0495645_0056222 3300046543 Bacteria 2857
176 Ga0495667_0005834 3300046559 Bacteria 8346
177 Ga0495667_0011425 3300046559 Bacteria 6008
178 Ga0495623_0046933 3300046679 Bacteria 2741
179 Ga0495669_0002047 3300046684 Bacteria 8268
180 Ga0495613_0014684 3300046689 Bacteria 5811
181 Ga0495581_0031013 3300047315 Bacteria 3097
182 Ga0495680_0013383 3300047322 Bacteria 7159
183 Ga0495680_0025810 3300047322 Bacteria 4857
184 Ga0495593_0006009 3300047673 Bacteria 7148
185 Ga0495602_0035143 3300048088 Bacteria 4677
186 Ga0495602_0036985 3300048088 Bacteria 4536
187 Ga0496107_0098335 3300048910 Bacteria 2143
188 Ga0496108_0081280 3300048911 Bacteria 2746
189 Ga0496110_0001731 3300048913 Bacteria 16077
190 Ga0496111_0087469 3300048914 Bacteria 2281
191 Ga0496112_0044748 3300048915 Bacteria 4338
192 Ga0496115_0059831 3300048918 Bacteria 3068
193 Ga0496116_0000136 3300048919 Bacteria 153155
194 Ga0496117_0006037 3300048920 Bacteria 12442
195 Ga0496118_0003286 3300048921 Bacteria 20575
196 Ga0496126_0000055 3300048929 Bacteria 297958
197 Ga0496126_0071511 3300048929 Bacteria 3088
198 Ga0501034_0040616 3300049571 Bacteria 4709
199 Ga0501070_0002329 3300049586 Bacteria 16672
200 Ga0501070_0094218 3300049586 Bacteria 2478
201 Ga0501074_0003757 3300049590 Bacteria 10788
202 Ga0501079_0011417 3300049741 Bacteria 6779
203 Ga0501080_0001125 3300049742 Bacteria 22015
204 nmdc:mga0qj67_654_c1 3300050509 Bacteria 23875
205 nmdc:mga0n895_34156_c1 3300050512 Bacteria 4894
206 nmdc:mga0a205_65454_c1 3300050515 Bacteria 3512
207 Ga0495612_0027566 3300053078 Bacteria 2285
208 Ga0495595_0008173 3300053084 Bacteria 4293
209 Ga0500646_0000269 3300053090 Bacteria 15908
210 Ga0500559_0005984 3300053136 Bacteria 5525
211 2644092368 2643221615 Bacteria 5487866
212 2644322171 2643221657 Bacteria 5490246
213 2753267894 2751185782 Bacteria 11227053
214 8002790826 8002784119 Bacteria 9788632
215 Ga0316582_0011936
216 Ga0070683_100061732
217 Ga0070692_10030357
218 Ga0070675_100001942
219 Ga0070659_100037516
220 Ga0070709_10000759
221 Ga0070709_10011091
222 Ga0070714_100000470
223 Ga0070714_100002892
224 Ga0070714_100003792
225 Ga0070714_100020618
226 Ga0070714_100073864
227 Ga0070713_100001573
228 Ga0070713_100030992
229 Ga0070713_100050521
230 Ga0070713_100160333
231 Ga0070710_10000494
232 Ga0070710_10000642
233 Ga0070711_100013780
234 Ga0070700_100019901
235 Ga0070708_100001833
236 Ga0070663_100032718
237 Ga0070662_100041036
238 Ga0070706_100000535
239 Ga0070706_100002700
240 Ga0070706_100008259
241 Ga0070706_100017472
242 Ga0070706_100059146
243 Ga0070706_100100990
244 Ga0070707_100001203
245 Ga0070707_100007029
246 Ga0070707_100016671
247 Ga0070707_100064022
248 Ga0070698_100000167
249 Ga0070698_100001558
250 Ga0070698_100002267
251 Ga0070698_100005949
252 Ga0070684_100074486
253 Ga0070697_100015715
254 Ga0070665_100211392
255 Ga0068854_100031897
256 Ga0068860_100038587
257 Ga0081540_1034816
258 Ga0070717_10005039
259 Ga0070717_10016442
260 Ga0070717_10093988
261 Ga0070717_10209944
262 Ga0070715_10032397
263 Ga0070716_100000192
264 Ga0070716_100009461
265 Ga0070712_100001218
266 Ga0070712_100025151
267 Ga0075430_100000856
268 Ga0075433_10065232
269 Ga0075433_10194259
270 Ga0075434_100011103
271 Ga0075436_100024021
272 Ga0111539_10029460
273 Ga0105245_10030222
274 Ga0163163_10001808
275 Ga0163163_10396700
276 Ga0206353_10104667
277 Ga0213875_10000592
278 Ga0213875_10000745
279 Ga0224572_1003272
280 Ga0228598_1007375
281 Ga0207692_10000632
282 Ga0207692_10005852
283 Ga0207688_10008944
284 Ga0207685_10000657
285 Ga0207685_10009576
286 Ga0207699_10001105
287 Ga0207699_10053726
288 Ga0207684_10025938
289 Ga0207684_10042294
290 Ga0207684_10105855
291 Ga0207693_10000354
292 Ga0207693_10002463
293 Ga0207693_10039643
294 Ga0207693_10111709
295 Ga0207663_10003613
296 Ga0207663_10010641
297 Ga0207646_10001784
298 Ga0207646_10009513
299 Ga0207646_10020020
300 Ga0207646_10020533
301 Ga0207659_10010723
302 Ga0207700_10010540
303 Ga0207700_10018386
304 Ga0207700_10019687
305 Ga0207664_10002202
306 Ga0207664_10007990
307 Ga0207664_10018685
308 Ga0207664_10022239
309 Ga0207690_10016985
310 Ga0207706_10067138
311 Ga0207665_10000042
312 Ga0207679_10021821
313 Ga0207677_10012497
314 Ga0207703_10128379
315 Ga0207708_10048852
316 Ga0207641_10120399
317 Ga0207676_10010962
318 Ga0207674_10140646
319 Ga0268266_10169676
320 Ga0268266_10197078
321 Ga0268264_10093155
322 Ga0268264_10192585
323 Ga0307512_10036111
324 Ga0265330_10027740
325 Ga0307508_10076094
326 Ga0316575_10000199
327 Ga0316579_10003238
328 Ga0316576_10001127
329 Ga0316576_10001423
330 Ga0316576_10007176
331 Ga0316576_10025927
332 Ga0316578_10000425
333 Ga0316578_10011562
334 Ga0316578_10018433
335 Ga0316577_10017267
336 Ga0316577_10021672
337 Ga0307518_10053815
338 Ga0307415_100020489
339 Ga0307415_100036117
340 Ga0307415_100046850
341 Ga0316583_10005077
342 Ga0373939_0002758
343 Ga0373957_0001254
344 Ga0373957_0002463
345 Ga0373960_0005483
346 Ga0373955_0015604
347 Ga0316574_0002828
348 Ga0373935_0004111
349 Ga0373935_0006936
350 Ga0373935_0164751
351 Ga0373933_0000337
352 Ga0373937_0007570
353 Ga0373937_0009820
354 Ga0373937_0020111
355 Ga0373937_0076246
356 Ga0316582_0000652
357 Ga0316582_0004172
358 Ga0316582_0040684
359 Ga0316582_0061427
360 Ga0316582_0062605
361 Ga0316584_0003431
362 Ga0316584_0015708
363 Ga0316584_0045386
364 Ga0373925_0066646
365 Ga0316581_0018698
366 Ga0436364_1183580
367 Ga0436364_1223233
368 Ga0400488_14556
369 Ga0400488_56089
370 Ga0436365_0647117
371 Ga0451804_0822275
372 Ga0466961_0025563
373 Ga0466968_0022014
374 Ga0466970_0025338
375 Ga0466959_0025238
376 Ga0466959_0033391
377 Ga0495592_0030677
378 Ga0495641_0012244
379 Ga0495651_0011092
380 Ga0495651_0019026
381 Ga0495651_0027988
382 Ga0495653_0145492
383 Ga0495662_0004881
384 Ga0495662_0017742
385 Ga0495664_0050771
386 Ga0495608_0062458
387 Ga0495652_0126622
388 Ga0495640_0013253
389 Ga0495645_0056222
390 Ga0495667_0005834
391 Ga0495667_0011425
392 Ga0495623_0046933
393 Ga0495669_0002047
394 Ga0495613_0014684
395 Ga0495581_0031013
396 Ga0495680_0013383
397 Ga0495680_0025810
398 Ga0495593_0006009
399 Ga0495602_0035143
400 Ga0495602_0036985
401 Ga0496107_0098335
402 Ga0496108_0081280
403 Ga0496110_0001731
404 Ga0496111_0087469
405 Ga0496112_0044748
406 Ga0496115_0059831
407 Ga0496116_0000136
408 Ga0496117_0006037
409 Ga0496118_0003286
410 Ga0496126_0000055
411 Ga0496126_0071511
412 Ga0501034_0040616
413 Ga0501070_0002329
414 Ga0501070_0094218
415 Ga0501074_0003757
416 Ga0501079_0011417
417 Ga0501080_0001125
418 nmdc:mga0qj67_654_c1
419 nmdc:mga0n895_34156_c1
420 nmdc:mga0a205_65454_c1
421 Ga0495612_0027566
422 Ga0495595_0008173
423 Ga0500646_0000269
424 Ga0500559_0005984
425 2644092368
426 2644322171
427 2753267894
428 8002790826

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

494

569

0.97

PF00501

AMP-binding

AMP-binding enzyme

35

440

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ni2-assembly1.cif.gz_A crystal structures and enzymatic mechanisms of a populus tomentosa 4-coumarate:coa ligase 0.9346 4 494
5bsv-assembly1.cif.gz_A crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate 0.9314 4 495
7kq6-assembly3.cif.gz_C crystal structure of acetyl-coenzyme a synthetase from coccidioides immitis in complex with prx 0.9172 4 476
2p2j-assembly2.cif.gz_B acetyl-coa synthetase, k609a mutation 0.9153 4 493
8u2s-assembly2.cif.gz_B crystal structure of acetyl-coenzyme a synthetase from leishmania infantum (ethyl amp bound, p21 form) 0.9152 4 493
ID Description Score Start End Superfamily
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9771 398 495 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9694 399 492 3.30.300.30
af_Q9VXZ8_496_596_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9623 399 494 3.30.300.30
af_A0A1D6KNL0_124_190_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9616 402 466 3.30.300.30
af_Q9XV68_424_526_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9616 399 500 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A3D5MRC7-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.954 395 499 GO:0016405
AF-A0A2E4XRB8-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9452 401 499 GO:0006631
GO:0031956
AF-A0A327YSD6-F1-model_v4 AMP-binding enzyme 0.9448 5 191
AF-A0A2K3LEK0-F1-model_v4 4-coumarate-CoA ligase 7-like protein 0.9351 409 499 GO:0016405
AF-A0A533VPQ0-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9342 5 396 GO:0016874

Map