F323689

General Info

Members Datasets Scaffolds Average Seq Length
213 135 426 402

Family's Representative Sequence

Representative Sequence 3300005345|Ga0070692_10065360|Ga0070692_100653601
Length 452
Sequence VRVRHGLRRPDAPLHERPVDPGYQRQRGATVVGYAHDRREPLDDRAITTELPLAADFAAPPTAADHVRWTESDAAARPGRLARLRARFETAGIDAYFGLRPAHMRYLTGFVLGEGEEKVAGTSGHFLVGGGEVLVLADTRYTIQAGREASGAQVVDGPRDLATGWAALVASVGARRVGVEAALLPHAVWRRLELAAPDVELVPIEGWVEADRAIKEPAELERVAAACAVADRALATLLPKIRPGATERDLALELEWLIRTGGAEAVAFEPACLVGSNAALPHGAPSDTAVRDGAVVLFDFGAQVGGYRSDMTRTLFVGEPAERDLAVYQLVARAQAAAIAELEACVEGELALPSGRDLDQIARRLIETDGRWPPYGHGLGHGIGLQTHEPPSLGAWALDGPLPSPTVFSVEPGIYLEGETGVRIEDLVLLDGGAGRVERLTRFPREVLVLDA

Samples

Sample ID Description Type Environment
1 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
74 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
77 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
78 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
81 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
87 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
88 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
89 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
90 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
91 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
92 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
93 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
94 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
95 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
96 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
97 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
98 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
129 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
130 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
133 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
134 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
135 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.98
Rhizosphere 92.02
Stem 0
Stem Tuber 0
Unclassified 14.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070692_10065360 3300005345 Archaea 1925
2 Ga0070676_10070504 3300005328 Bacteria 2097
3 Ga0068869_100107514 3300005334 Unclassified 2118
4 Ga0070680_100000004 3300005336 Bacteria 129387
5 Ga0070682_100057254 3300005337 Bacteria 2455
6 Ga0070661_100056644 3300005344 Bacteria 2872
7 Ga0070692_10031121 3300005345 Unclassified 2673
8 Ga0070668_100059380 3300005347 Bacteria 2960
9 Ga0070669_100041280 3300005353 Bacteria 3355
10 Ga0070674_100003458 3300005356 Bacteria 8866
11 Ga0070673_100040993 3300005364 Bacteria 3555
12 Ga0070673_100142430 3300005364 Archaea 2024
13 Ga0070701_10101994 3300005438 Bacteria 1591
14 Ga0070705_100007898 3300005440 Bacteria 5256
15 Ga0070705_100167430 3300005440 Unclassified 1475
16 Ga0070700_100050427 3300005441 Bacteria 2587
17 Ga0070708_100000524 3300005445 Bacteria 28887
18 Ga0070708_100026576 3300005445 Bacteria 4956
19 Ga0070708_100110454 3300005445 Bacteria 2526
20 Ga0070708_100118421 3300005445 Archaea 2440
21 Ga0070663_100017585 3300005455 Bacteria 4669
22 Ga0070678_100029756 3300005456 Bacteria 3744
23 Ga0068867_100005299 3300005459 Bacteria 9106
24 Ga0070685_10073864 3300005466 Bacteria 2028
25 Ga0070706_100000968 3300005467 Bacteria 31344
26 Ga0070706_100017770 3300005467 Bacteria 6562
27 Ga0070707_100001032 3300005468 Bacteria 27578
28 Ga0070707_100021701 3300005468 Bacteria 6069
29 Ga0070698_100020699 3300005471 Bacteria 6897
30 Ga0070698_100027983 3300005471 Bacteria 5857
31 Ga0070698_100028987 3300005471 Bacteria 5746
32 Ga0070699_100001116 3300005518 Bacteria 25013
33 Ga0070699_100002514 3300005518 Bacteria 16460
34 Ga0070699_100018056 3300005518 Bacteria 6059
35 Ga0070697_100007210 3300005536 Bacteria 8646
36 Ga0070697_100125643 3300005536 Bacteria 2148
37 Ga0070697_100135226 3300005536 Bacteria 2070
38 Ga0070686_100173215 3300005544 Unclassified 1528
39 Ga0070695_100030914 3300005545 Unclassified 3336
40 Ga0070695_100044575 3300005545 Bacteria 2824
41 Ga0070696_100001433 3300005546 Bacteria 15601
42 Ga0070696_100014787 3300005546 Bacteria 5238
43 Ga0070696_100050319 3300005546 Bacteria 2896
44 Ga0070696_100101278 3300005546 Archaea 2064
45 Ga0070693_100068625 3300005547 Bacteria 2081
46 Ga0070704_100015578 3300005549 Unclassified 4779
47 Ga0070704_100042441 3300005549 Bacteria 3146
48 Ga0070704_100085144 3300005549 Bacteria 2339
49 Ga0068854_100101276 3300005578 Bacteria 2160
50 Ga0068852_100029964 3300005616 Bacteria 4475
51 Ga0068864_100024049 3300005618 Bacteria 5121
52 Ga0068870_10012236 3300005840 Bacteria 4004
53 Ga0068862_100141497 3300005844 Archaea 2136
54 Ga0075428_100005021 3300006844 Bacteria 14702
55 Ga0075433_10010954 3300006852 Bacteria 7293
56 Ga0075434_100144007 3300006871 Unclassified 2403
57 Ga0111539_10175620 3300009094 Unclassified 2502
58 Ga0105245_10136094 3300009098 Unclassified 2309
59 Ga0105245_10196027 3300009098 Bacteria 1937
60 Ga0114129_10000135 3300009147 Bacteria 76177
61 Ga0114129_10048239 3300009147 Bacteria 5985
62 Ga0114129_10325397 3300009147 Unclassified 2043
63 Ga0105243_10003592 3300009148 Bacteria 12509
64 Ga0105243_10125249 3300009148 Bacteria 2172
65 Ga0105242_10063531 3300009176 Bacteria 3040
66 Ga0105249_10006371 3300009553 Bacteria 10265
67 Ga0105239_10045656 3300010375 Unclassified 4802
68 Ga0105239_10299310 3300010375 Archaea 1811
69 Ga0157378_10058384 3300013297 Bacteria 3441
70 Ga0157375_10035122 3300013308 Bacteria 4783
71 Ga0163163_10049556 3300014325 Bacteria 4134
72 Ga0163163_10050359 3300014325 Bacteria 4101
73 Ga0163163_10197077 3300014325 Archaea 2062
74 Ga0157380_10021435 3300014326 Bacteria 4846
75 Ga0157377_10007283 3300014745 Bacteria 5333
76 Ga0207688_10009289 3300025901 Bacteria 5359
77 Ga0207643_10002771 3300025908 Bacteria 9466
78 Ga0207684_10002256 3300025910 Bacteria 19635
79 Ga0207684_10005827 3300025910 Bacteria 11290
80 Ga0207660_10000001 3300025917 Bacteria 1034169
81 Ga0207662_10001452 3300025918 Bacteria 11502
82 Ga0207649_10029587 3300025920 Bacteria 3235
83 Ga0207646_10001709 3300025922 Bacteria 26658
84 Ga0207646_10003216 3300025922 Bacteria 18648
85 Ga0207694_10097630 3300025924 Bacteria 2325
86 Ga0207650_10033688 3300025925 Bacteria 3711
87 Ga0207706_10016216 3300025933 Bacteria 6733
88 Ga0207706_10056792 3300025933 Bacteria 3450
89 Ga0207686_10012382 3300025934 Bacteria 4691
90 Ga0207709_10051070 3300025935 Bacteria 2532
91 Ga0207669_10008063 3300025937 Bacteria 4926
92 Ga0207704_10198982 3300025938 Archaea 1464
93 Ga0207691_10056071 3300025940 Bacteria 3590
94 Ga0207689_10138583 3300025942 Unclassified 2004
95 Ga0207679_10155445 3300025945 Unclassified 1867
96 Ga0207712_10101284 3300025961 Archaea 2142
97 Ga0207712_10190617 3300025961 Unclassified 1618
98 Ga0207678_10029243 3300026067 Bacteria 4808
99 Ga0207708_10056000 3300026075 Bacteria 3007
100 Ga0207708_10096994 3300026075 Bacteria 2278
101 Ga0207708_10155505 3300026075 Bacteria 1803
102 Ga0207648_10003965 3300026089 Bacteria 15376
103 Ga0207674_10007569 3300026116 Bacteria 12654
104 Ga0207683_10017551 3300026121 Bacteria 6101
105 Ga0268264_10104156 3300028381 Bacteria 2472
106 Ga0268264_10263073 3300028381 Archaea 1608
107 Ga0265318_10024017 3300028577 Bacteria 2424
108 Ga0265322_10008251 3300028654 Bacteria 3036
109 Ga0265320_10048438 3300031240 Bacteria 2074
110 Ga0265316_10049725 3300031344 Bacteria 3301
111 Ga0265342_10030701 3300031712 Bacteria 3327
112 Ga0316578_10060892 3300031728 Bacteria 2223
113 Ga0307410_10156264 3300031852 Unclassified 1704
114 Ga0373943_0002454 3300035170 Bacteria 8426
115 Ga0316574_0010693 3300035398 Bacteria 5195
116 Ga0373925_0034897 3300037068 Archaea 3709
117 Ga0451577_0019671 3300042876 Bacteria 6206
118 Ga0451577_0176271 3300042876 Bacteria 1927
119 Ga0453683_0046525 3300044673 Bacteria 2720
120 Ga0453683_0049182 3300044673 Bacteria 2643
121 Ga0451576_0129296 3300045051 Unclassified 2632
122 Ga0495603_0076389 3300046455 Bacteria 1966
123 Ga0495680_0109540 3300047322 Bacteria 2048
124 Ga0496100_0114794 3300048903 Unclassified 1877
125 Ga0496100_0167282 3300048903 Unclassified 1581
126 Ga0496102_0018670 3300048905 Bacteria 6099
127 Ga0496102_0019577 3300048905 Bacteria 5962
128 Ga0496105_0001431 3300048908 Bacteria 16790
129 Ga0496106_0027243 3300048909 Bacteria 4256
130 Ga0496106_0065505 3300048909 Bacteria 2766
131 Ga0496107_0098650 3300048910 Bacteria 2140
132 Ga0496108_0163590 3300048911 Bacteria 1924
133 Ga0496109_0032763 3300048912 Bacteria 4673
134 Ga0496109_0296085 3300048912 Bacteria 1526
135 Ga0496110_0017280 3300048913 Bacteria 6034
136 Ga0496111_0033265 3300048914 Bacteria 3676
137 Ga0496112_0000005 3300048915 Bacteria 525541
138 Ga0496112_0051792 3300048915 Bacteria 4027
139 Ga0496112_0282752 3300048915 Unclassified 1606
140 Ga0496114_0205361 3300048917 Unclassified 1727
141 Ga0501031_0008383 3300049568 Bacteria 6722
142 Ga0501031_0040363 3300049568 Bacteria 3047
143 Ga0501031_0044175 3300049568 Bacteria 2908
144 Ga0501032_0137986 3300049569 Unclassified 1607
145 Ga0501036_0017066 3300049572 Bacteria 6068
146 Ga0501036_0166282 3300049572 Unclassified 1859
147 Ga0501036_0205032 3300049572 Bacteria 1658
148 Ga0501037_0054734 3300049573 Bacteria 2918
149 Ga0501038_0072944 3300049574 Bacteria 2908
150 Ga0501038_0073148 3300049574 Bacteria 2903
151 Ga0501039_0039152 3300049575 Bacteria 3661
152 Ga0501040_0053100 3300049576 Bacteria 2775
153 Ga0501040_0115014 3300049576 Unclassified 1883
154 Ga0501041_0003258 3300049577 Bacteria 9337
155 Ga0501041_0016302 3300049577 Bacteria 4418
156 Ga0501041_0018763 3300049577 Bacteria 4120
157 Ga0501042_0002253 3300049578 Bacteria 11770
158 Ga0501042_0127545 3300049578 Bacteria 1832
159 Ga0501042_0140108 3300049578 Bacteria 1744
160 Ga0501043_0030526 3300049579 Bacteria 4236
161 Ga0501046_0020442 3300049580 Bacteria 5474
162 Ga0501046_0032518 3300049580 Bacteria 4224
163 Ga0501048_0018799 3300049582 Bacteria 5080
164 Ga0501048_0030084 3300049582 Bacteria 3932
165 Ga0501067_0034190 3300049583 Archaea 2821
166 Ga0501068_0050340 3300049584 Bacteria 2518
167 Ga0501068_0136227 3300049584 Bacteria 1538
168 Ga0501070_0106319 3300049586 Unclassified 2319
169 Ga0501071_0015811 3300049587 Bacteria 5184
170 Ga0501071_0079095 3300049587 Bacteria 2404
171 Ga0501071_0100666 3300049587 Unclassified 2130
172 Ga0501072_0037392 3300049588 Bacteria 3807
173 Ga0501072_0086345 3300049588 Unclassified 2490
174 Ga0501072_0146460 3300049588 Bacteria 1883
175 Ga0501072_0227777 3300049588 Bacteria 1485
176 Ga0501072_0243405 3300049588 Bacteria 1433
177 Ga0501073_0113632 3300049589 Bacteria 1878
178 Ga0501073_0130236 3300049589 Bacteria 1744
179 Ga0501075_0024923 3300049591 Bacteria 4392
180 Ga0501075_0049039 3300049591 Bacteria 3174
181 Ga0501075_0097344 3300049591 Bacteria 2233
182 Ga0501075_0251981 3300049591 Bacteria 1346
183 Ga0501076_0136993 3300049592 Archaea 1988
184 Ga0501077_0062584 3300049593 Bacteria 2360
185 Ga0501077_0071190 3300049593 Bacteria 2204
186 Ga0501079_0003121 3300049741 Bacteria 12134
187 Ga0501079_0004801 3300049741 Bacteria 10020
188 Ga0501079_0096227 3300049741 Bacteria 2295
189 Ga0501079_0173810 3300049741 Bacteria 1680
190 Ga0501079_0197799 3300049741 Bacteria 1569
191 Ga0501080_0158071 3300049742 Bacteria 2094
192 Ga0501080_0368818 3300049742 Bacteria 1295
193 Ga0501044_0069889 3300049823 Bacteria 3574
194 Ga0501044_0313830 3300049823 Bacteria 1494
195 Ga0501045_0012810 3300049824 Bacteria 5909
196 nmdc:mga05p37_184715_c1 3300050507 Bacteria 2535
197 nmdc:mga05p37_44_c1 3300050507 Bacteria 107032
198 nmdc:mga06r32_132093_c1 3300050510 Bacteria 2469
199 nmdc:mga08y16_165589_c1 3300050511 Unclassified 2297
200 nmdc:mga0n895_200927_c1 3300050512 Bacteria 2024
201 nmdc:mga0a205_198486_c1 3300050515 Unclassified 1897
202 nmdc:mga0a205_25156_c1 3300050515 Bacteria 5669
203 Ga0495601_0030289 3300053077 Bacteria 3359
204 Ga0495612_0033151 3300053078 Unclassified 2089
205 Ga0495619_0094707 3300053085 Bacteria 2025
206 Ga0495619_0136768 3300053085 Archaea 1686
207 Ga0501084_0023682 3300054114 Bacteria 5121
208 Ga0501084_0073579 3300054114 Archaea 2862
209 Ga0590074_010835 3300059423 Unclassified 1526
210 Ga0501082_0027443 3300060353 Bacteria 4901
211 Ga0501082_0060693 3300060353 Bacteria 3255
212 Ga0530510_0004332 3300061734 Bacteria 9822
213 Ga0530510_0028192 3300061734 Bacteria 4026
214 Ga0070692_10065360
215 Ga0070676_10070504
216 Ga0068869_100107514
217 Ga0070680_100000004
218 Ga0070682_100057254
219 Ga0070661_100056644
220 Ga0070692_10031121
221 Ga0070668_100059380
222 Ga0070669_100041280
223 Ga0070674_100003458
224 Ga0070673_100040993
225 Ga0070673_100142430
226 Ga0070701_10101994
227 Ga0070705_100007898
228 Ga0070705_100167430
229 Ga0070700_100050427
230 Ga0070708_100000524
231 Ga0070708_100026576
232 Ga0070708_100110454
233 Ga0070708_100118421
234 Ga0070663_100017585
235 Ga0070678_100029756
236 Ga0068867_100005299
237 Ga0070685_10073864
238 Ga0070706_100000968
239 Ga0070706_100017770
240 Ga0070707_100001032
241 Ga0070707_100021701
242 Ga0070698_100020699
243 Ga0070698_100027983
244 Ga0070698_100028987
245 Ga0070699_100001116
246 Ga0070699_100002514
247 Ga0070699_100018056
248 Ga0070697_100007210
249 Ga0070697_100125643
250 Ga0070697_100135226
251 Ga0070686_100173215
252 Ga0070695_100030914
253 Ga0070695_100044575
254 Ga0070696_100001433
255 Ga0070696_100014787
256 Ga0070696_100050319
257 Ga0070696_100101278
258 Ga0070693_100068625
259 Ga0070704_100015578
260 Ga0070704_100042441
261 Ga0070704_100085144
262 Ga0068854_100101276
263 Ga0068852_100029964
264 Ga0068864_100024049
265 Ga0068870_10012236
266 Ga0068862_100141497
267 Ga0075428_100005021
268 Ga0075433_10010954
269 Ga0075434_100144007
270 Ga0111539_10175620
271 Ga0105245_10136094
272 Ga0105245_10196027
273 Ga0114129_10000135
274 Ga0114129_10048239
275 Ga0114129_10325397
276 Ga0105243_10003592
277 Ga0105243_10125249
278 Ga0105242_10063531
279 Ga0105249_10006371
280 Ga0105239_10045656
281 Ga0105239_10299310
282 Ga0157378_10058384
283 Ga0157375_10035122
284 Ga0163163_10049556
285 Ga0163163_10050359
286 Ga0163163_10197077
287 Ga0157380_10021435
288 Ga0157377_10007283
289 Ga0207688_10009289
290 Ga0207643_10002771
291 Ga0207684_10002256
292 Ga0207684_10005827
293 Ga0207660_10000001
294 Ga0207662_10001452
295 Ga0207649_10029587
296 Ga0207646_10001709
297 Ga0207646_10003216
298 Ga0207694_10097630
299 Ga0207650_10033688
300 Ga0207706_10016216
301 Ga0207706_10056792
302 Ga0207686_10012382
303 Ga0207709_10051070
304 Ga0207669_10008063
305 Ga0207704_10198982
306 Ga0207691_10056071
307 Ga0207689_10138583
308 Ga0207679_10155445
309 Ga0207712_10101284
310 Ga0207712_10190617
311 Ga0207678_10029243
312 Ga0207708_10056000
313 Ga0207708_10096994
314 Ga0207708_10155505
315 Ga0207648_10003965
316 Ga0207674_10007569
317 Ga0207683_10017551
318 Ga0268264_10104156
319 Ga0268264_10263073
320 Ga0265318_10024017
321 Ga0265322_10008251
322 Ga0265320_10048438
323 Ga0265316_10049725
324 Ga0265342_10030701
325 Ga0316578_10060892
326 Ga0307410_10156264
327 Ga0373943_0002454
328 Ga0316574_0010693
329 Ga0373925_0034897
330 Ga0451577_0019671
331 Ga0451577_0176271
332 Ga0453683_0046525
333 Ga0453683_0049182
334 Ga0451576_0129296
335 Ga0495603_0076389
336 Ga0495680_0109540
337 Ga0496100_0114794
338 Ga0496100_0167282
339 Ga0496102_0018670
340 Ga0496102_0019577
341 Ga0496105_0001431
342 Ga0496106_0027243
343 Ga0496106_0065505
344 Ga0496107_0098650
345 Ga0496108_0163590
346 Ga0496109_0032763
347 Ga0496109_0296085
348 Ga0496110_0017280
349 Ga0496111_0033265
350 Ga0496112_0000005
351 Ga0496112_0051792
352 Ga0496112_0282752
353 Ga0496114_0205361
354 Ga0501031_0008383
355 Ga0501031_0040363
356 Ga0501031_0044175
357 Ga0501032_0137986
358 Ga0501036_0017066
359 Ga0501036_0166282
360 Ga0501036_0205032
361 Ga0501037_0054734
362 Ga0501038_0072944
363 Ga0501038_0073148
364 Ga0501039_0039152
365 Ga0501040_0053100
366 Ga0501040_0115014
367 Ga0501041_0003258
368 Ga0501041_0016302
369 Ga0501041_0018763
370 Ga0501042_0002253
371 Ga0501042_0127545
372 Ga0501042_0140108
373 Ga0501043_0030526
374 Ga0501046_0020442
375 Ga0501046_0032518
376 Ga0501048_0018799
377 Ga0501048_0030084
378 Ga0501067_0034190
379 Ga0501068_0050340
380 Ga0501068_0136227
381 Ga0501070_0106319
382 Ga0501071_0015811
383 Ga0501071_0079095
384 Ga0501071_0100666
385 Ga0501072_0037392
386 Ga0501072_0086345
387 Ga0501072_0146460
388 Ga0501072_0227777
389 Ga0501072_0243405
390 Ga0501073_0113632
391 Ga0501073_0130236
392 Ga0501075_0024923
393 Ga0501075_0049039
394 Ga0501075_0097344
395 Ga0501075_0251981
396 Ga0501076_0136993
397 Ga0501077_0062584
398 Ga0501077_0071190
399 Ga0501079_0003121
400 Ga0501079_0004801
401 Ga0501079_0096227
402 Ga0501079_0173810
403 Ga0501079_0197799
404 Ga0501080_0158071
405 Ga0501080_0368818
406 Ga0501044_0069889
407 Ga0501044_0313830
408 Ga0501045_0012810
409 nmdc:mga05p37_184715_c1
410 nmdc:mga05p37_44_c1
411 nmdc:mga06r32_132093_c1
412 nmdc:mga08y16_165589_c1
413 nmdc:mga0n895_200927_c1
414 nmdc:mga0a205_198486_c1
415 nmdc:mga0a205_25156_c1
416 Ga0495601_0030289
417 Ga0495612_0033151
418 Ga0495619_0094707
419 Ga0495619_0136768
420 Ga0501084_0023682
421 Ga0501084_0073579
422 Ga0590074_010835
423 Ga0501082_0027443
424 Ga0501082_0060693
425 Ga0530510_0004332
426 Ga0530510_0028192

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00557

Peptidase_M24

Metallopeptidase family M24

221

431

0.93

PF01321

Creatinase_N

Creatinase/Prolidase N-terminal domain

80

214

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wy2-assembly1.cif.gz_B crystal structure of the prolidase from pyrococcus horikoshii ot3 0.9484 34 399
3q6d-assembly1.cif.gz_A xaa-pro dipeptidase from bacillus anthracis. 0.9429 34 405
1pv9-assembly1.cif.gz_B prolidase from pyrococcus furiosus 0.9341 37 397
3q6d-assembly1.cif.gz_A xaa-pro dipeptidase from bacillus anthracis. 0.9327 34 405
1wy2-assembly1.cif.gz_B crystal structure of the prolidase from pyrococcus horikoshii ot3 0.9325 34 399
ID Description Score Start End Superfamily
2howB02 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9658 169 405 3.90.230.10
2howB02 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9576 169 405 3.90.230.10
1wy2A02 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9515 169 402 3.90.230.10
af_P9WHS7_144_374_3.90.230.10 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9513 167 405 3.90.230.10
5cdlA02 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9452 168 403 3.90.230.10
ID Description Score Start End GO Terms
AF-A0A3D3QBG0-F1-model_v4 Peptidase M24 family protein 0.9691 204 405 GO:0004177
GO:0008235
GO:0046872
AF-A0A7Y8LH05-F1-model_v4 Aminopeptidase P family protein 0.9682 169 405 GO:0004177
GO:0046872
AF-A0A7C1K8E3-F1-model_v4 Aminopeptidase P family protein 0.9673 33 406 GO:0004177
GO:0046872
AF-A0A7V5YQS5-F1-model_v4 Aminopeptidase P family protein 0.9658 27 405 GO:0004177
AF-A0A7C6LIM9-F1-model_v4 M24 family metallopeptidase 0.9654 167 294

Map