F323217

General Info

Members Datasets Scaffolds Average Seq Length
212 164 424 342

Family's Representative Sequence

Representative Sequence 3300046491|Ga0495584_0049252|Ga0495584_0049252_689_1939
Length 395
Sequence MAGFGAARGPKGRFPQITFPSTLQFRLRSTSNPIIELERNLNGMEMAMRKSRFVALAGVLIAASGAAVFATLAIPAKEASAARDPRQESPMVSLVTAARVSGSERGFTGTIGARVESNLGFRVAGKIVERRVNVGEQVKTGQPLMRIDETDLRLALTAKRNAVAAARATVVQMDADERRYANLVNDGWTSRQRYEQAKAASDTANAQLAAAEADMQTLGEPGQVVSAGQTVVRLAQSGPREAVVALPETIRPAIGSVAEASLYGSDGRRHTARLRQLSDSADVQTRTYEARYVLEGEAAAAPLGATVTIRLASQETQPEVQVPLGAILDDGRKTGVWVFDSAASTVHFRPVKLARVTSESAVISGLSSDDRVVSLGAHLLQEGARVRTASENRSN

Samples

Sample ID Description Type Environment
1 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
47 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
67 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
68 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
69 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
77 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
78 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
79 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
80 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
81 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
82 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
83 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
84 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
85 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
86 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
87 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
88 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
89 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
92 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
93 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
94 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
100 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
101 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
102 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
103 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
104 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
105 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
106 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
107 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
108 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
109 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
110 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
111 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
112 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
113 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
114 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
115 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
116 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
117 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
118 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
119 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
120 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
121 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
122 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
123 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
124 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
125 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
126 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
129 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
130 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
131 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
132 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
133 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
134 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
135 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
136 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
137 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
138 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
139 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
140 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
141 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
142 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
143 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
144 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
145 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
146 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
147 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
148 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
149 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
150 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
151 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
152 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
153 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
154 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
155 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
156 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
157 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
158 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
159 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
160 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
161 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
162 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
163 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
164 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.43
Metatranscriptomes 0
Isolates 15.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 29.25
Nodule 9.91
Rhizoplane 2.83
Rhizosphere 46.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495584_0049252 3300046491 Bacteria 2123
2 JGI25153J46596_10006848 3300003215 Bacteria 5696
3 Ga0055539_1004158 3300003752 Bacteria 1945
4 Ga0070670_100094388 3300005331 Bacteria 2573
5 Ga0070670_100136328 3300005331 Bacteria 2121
6 Ga0068869_100007319 3300005334 Bacteria 7040
7 Ga0068869_100199358 3300005334 Bacteria 1577
8 Ga0070680_100153370 3300005336 Bacteria 1935
9 Ga0070668_100120524 3300005347 Bacteria 2096
10 Ga0070713_100012312 3300005436 Bacteria 6268
11 Ga0070663_100045136 3300005455 Bacteria 3112
12 Ga0070698_100087374 3300005471 Bacteria 3104
13 Ga0070698_100391280 3300005471 Bacteria 1323
14 Ga0070679_100007812 3300005530 Bacteria 10027
15 Ga0068853_100380616 3300005539 Bacteria 1318
16 Ga0070665_100156928 3300005548 Bacteria 2277
17 Ga0068855_100124855 3300005563 Bacteria 2944
18 Ga0068855_100193339 3300005563 Bacteria 2293
19 Ga0068856_100212316 3300005614 Bacteria 1951
20 Ga0068856_100341449 3300005614 Bacteria 1516
21 Ga0068859_100146471 3300005617 Bacteria 2437
22 Ga0068863_100058295 3300005841 Bacteria 3654
23 Ga0068863_100242992 3300005841 Bacteria 1738
24 Ga0081455_10023797 3300005937 Bacteria 5692
25 Ga0081455_10048684 3300005937 Bacteria 3660
26 Ga0081539_10009059 3300005985 Bacteria 8437
27 Ga0075365_10028418 3300006038 Bacteria 3567
28 Ga0075365_10040293 3300006038 Bacteria 3046
29 Ga0075365_10184231 3300006038 Bacteria 1460
30 Ga0075368_10009276 3300006042 Bacteria 3536
31 Ga0075363_100043502 3300006048 Bacteria 2376
32 Ga0075363_100049546 3300006048 Bacteria 2237
33 Ga0075364_10222073 3300006051 Bacteria 1282
34 Ga0070712_100321259 3300006175 Bacteria 1259
35 Ga0075362_10038660 3300006177 Bacteria 2096
36 Ga0075367_10002196 3300006178 Bacteria 8797
37 Ga0075367_10006635 3300006178 Bacteria 5866
38 Ga0075367_10027773 3300006178 Bacteria 3222
39 Ga0075369_10027982 3300006186 Bacteria 2360
40 Ga0075369_10046253 3300006186 Bacteria 1873
41 Ga0075366_10023327 3300006195 Bacteria 3605
42 Ga0075370_10009584 3300006353 Bacteria 5035
43 Ga0075370_10128127 3300006353 Bacteria 1480
44 Ga0075434_100257949 3300006871 Bacteria 1762
45 Ga0097620_100146467 3300006931 Bacteria 2437
46 Ga0105240_10109327 3300009093 Bacteria 3348
47 Ga0105247_10011403 3300009101 Bacteria 5361
48 Ga0114129_10340480 3300009147 Bacteria 1989
49 Ga0105242_10321344 3300009176 Bacteria 1420
50 Ga0105248_10000001 3300009177 Bacteria 1881304
51 Ga0105237_10080194 3300009545 Bacteria 3254
52 Ga0105249_10363944 3300009553 Bacteria 1468
53 Ga0105249_10376782 3300009553 Bacteria 1444
54 Ga0105239_10236761 3300010375 Bacteria 2049
55 Ga0105239_10256941 3300010375 Bacteria 1963
56 Ga0157370_10193617 3300013104 Bacteria 1887
57 Ga0157370_10235184 3300013104 Bacteria 1695
58 Ga0171462_1014 3300013250 Bacteria 198579
59 Ga0171462_1041 3300013250 Bacteria 66600
60 Ga0157378_10004228 3300013297 Bacteria 12667
61 Ga0163163_10069094 3300014325 Bacteria 3517
62 Ga0209677_101886 3300025253 Bacteria 8474
63 Ga0209455_1007378 3300025272 Bacteria 3112
64 Ga0209758_1000761 3300025297 Bacteria 46617
65 Ga0207710_10016591 3300025900 Bacteria 3118
66 Ga0207707_10019395 3300025912 Bacteria 5936
67 Ga0207695_10061707 3300025913 Bacteria 3873
68 Ga0207695_10167590 3300025913 Bacteria 2124
69 Ga0207671_10033856 3300025914 Bacteria 3799
70 Ga0207660_10111560 3300025917 Bacteria 2059
71 Ga0207652_10007791 3300025921 Bacteria 8603
72 Ga0207646_10099340 3300025922 Bacteria 2608
73 Ga0207650_10099738 3300025925 Bacteria 2233
74 Ga0207711_10000001 3300025941 Bacteria 1325674
75 Ga0207667_10244552 3300025949 Bacteria 1836
76 Ga0207668_10028553 3300025972 Bacteria 3648
77 Ga0207668_10138536 3300025972 Bacteria 1868
78 Ga0207668_10228170 3300025972 Bacteria 1500
79 Ga0207658_10169592 3300025986 Bacteria 1797
80 Ga0207677_10354040 3300026023 Bacteria 1231
81 Ga0207678_10092018 3300026067 Bacteria 2592
82 Ga0207641_10280117 3300026088 Bacteria 1568
83 Ga0207675_100319240 3300026118 Bacteria 1516
84 Ga0209813_10007124 3300027866 Bacteria 2778
85 Ga0268266_10316137 3300028379 Bacteria 1460
86 Ga0307515_10081837 3300028794 Bacteria 4187
87 Ga0307509_10035928 3300031507 Bacteria 5432
88 Ga0307509_10076651 3300031507 Bacteria 3469
89 Ga0307516_10046556 3300031730 Bacteria 4279
90 Ga0307510_10048857 3300033180 Bacteria 4508
91 Ga0373943_0057022 3300035170 Bacteria 1940
92 Ga0395899_0101884 3300037312 Bacteria 2072
93 Ga0395900_0045064 3300037418 Bacteria 4543
94 Ga0395900_0203018 3300037418 Bacteria 2005
95 Ga0395898_0021411 3300037466 Bacteria 6557
96 Ga0395905_0017805 3300037471 Bacteria 6749
97 Ga0395901_0057814 3300038443 Bacteria 4034
98 Ga0395901_0058348 3300038443 Bacteria 4014
99 Ga0395901_0061764 3300038443 Bacteria 3899
100 Ga0395901_0088006 3300038443 Bacteria 3248
101 Ga0395901_0113608 3300038443 Bacteria 2844
102 Ga0395901_0199805 3300038443 Bacteria 2096
103 Ga0436365_0704281 3300039437 Bacteria 1257
104 Ga0439465_0008593 3300041413 Bacteria 3223
105 Ga0466972_0004591 3300044658 Bacteria 6924
106 Ga0466964_0001221 3300044706 Bacteria 8706
107 Ga0466970_0078935 3300044765 Bacteria 1777
108 Ga0495638_0002335 3300046460 Bacteria 15593
109 Ga0495638_0028453 3300046460 Bacteria 3609
110 Ga0495638_0030116 3300046460 Bacteria 3496
111 Ga0495585_0049546 3300046492 Bacteria 2332
112 Ga0495606_0039029 3300046507 Bacteria 3206
113 Ga0495616_0041554 3300046513 Bacteria 2345
114 Ga0495620_0046338 3300046515 Bacteria 1878
115 Ga0495648_0025228 3300046524 Bacteria 4029
116 Ga0495609_0024323 3300046538 Bacteria 2779
117 Ga0495645_0078463 3300046543 Bacteria 2373
118 Ga0495633_0044703 3300046558 Bacteria 2099
119 Ga0495656_0021999 3300046615 Bacteria 2491
120 Ga0495668_0011187 3300046616 Bacteria 5385
121 Ga0495611_0084461 3300046648 Bacteria 1463
122 Ga0495625_0124465 3300046660 Bacteria 1751
123 Ga0495589_0035657 3300046794 Bacteria 2494
124 Ga0495673_0053816 3300047469 Bacteria 1753
125 Ga0496104_0032158 3300048907 Bacteria 4882
126 Ga0496105_0015893 3300048908 Bacteria 6003
127 Ga0496108_0010234 3300048911 Bacteria 7615
128 Ga0496109_0244808 3300048912 Bacteria 1688
129 Ga0496113_0156398 3300048916 Bacteria 1801
130 Ga0496118_0023568 3300048921 Bacteria 5342
131 Ga0496121_0000191 3300048924 Bacteria 136529
132 Ga0496121_0112715 3300048924 Bacteria 2071
133 Ga0496122_0054397 3300048925 Bacteria 3007
134 Ga0496124_0002311 3300048927 Bacteria 25168
135 Ga0496125_0015093 3300048928 Bacteria 7494
136 Ga0496126_0001250 3300048929 Bacteria 41108
137 Ga0496126_0004462 3300048929 Bacteria 16719
138 Ga0496126_0023370 3300048929 Bacteria 5991
139 nmdc:mga03683_150554_c1 3300050489 Bacteria 1050
140 nmdc:mga03n38_30663_c1 3300050490 Bacteria 2263
141 nmdc:mga03n38_84483_c1 3300050490 Bacteria 1499
142 nmdc:mga00v17_16192_c1 3300050491 Bacteria 4201
143 nmdc:mga00v17_48328_c1 3300050491 Bacteria 2579
144 nmdc:mga00v17_53148_c1 3300050491 Bacteria 2468
145 nmdc:mga0yw44_57428_c1 3300050492 Bacteria 2374
146 nmdc:mga0yw44_67388_c1 3300050492 Bacteria 2212
147 nmdc:mga0k408_9316_c1 3300050493 Bacteria 5292
148 nmdc:mga06z11_17452_c1 3300050494 Bacteria 3258
149 nmdc:mga06z11_53884_c1 3300050494 Bacteria 2071
150 nmdc:mga06z11_6244_c1 3300050494 Bacteria 4831
151 nmdc:mga06z11_78856_c1 3300050494 Bacteria 1761
152 nmdc:mga06z11_90215_c1 3300050494 Bacteria 1662
153 nmdc:mga04h51_17265_c1 3300050495 Bacteria 2108
154 nmdc:mga04h51_24792_c1 3300050495 Bacteria 1840
155 nmdc:mga07m45_5640_c1 3300050496 Bacteria 6254
156 nmdc:mga07m45_74767_c1 3300050496 Bacteria 1930
157 nmdc:mga0sz30_1053_c1 3300050516 Bacteria 9941
158 nmdc:mga0sz30_112904_c1 3300050516 Bacteria 1192
159 nmdc:mga0sz30_35118_c1 3300050516 Bacteria 2090
160 nmdc:mga0sz30_488_c1 3300050516 Bacteria 11210
161 Ga0495619_0066974 3300053085 Bacteria 2397
162 Ga0500578_0030674 3300053086 Bacteria 3455
163 Ga0500651_0074865 3300053093 Bacteria 2104
164 Ga0500556_0002546 3300053104 Bacteria 5770
165 Ga0500642_0000021 3300053130 Bacteria 146938
166 Ga0500658_0021042 3300053134 Bacteria 2468
167 Ga0500559_0016287 3300053136 Bacteria 3139
168 Ga0500568_0000175 3300053139 Bacteria 56086
169 Ga0500573_0029279 3300053140 Bacteria 3174
170 Ga0500577_0081716 3300053142 Bacteria 1290
171 Ga0500588_0067562 3300053146 Bacteria 1163
172 Ga0500590_107539 3300053148 Bacteria 1329
173 Ga0500616_0000006 3300053153 Bacteria 944738
174 Ga0500616_0026256 3300053153 Bacteria 3225
175 Ga0500616_0071649 3300053153 Bacteria 1764
176 Ga0500622_0033115 3300053156 Bacteria 2709
177 Ga0500634_0089797 3300053161 Bacteria 1563
178 Ga0500596_004514 3300053735 Bacteria 2544
179 Ga0500599_000118 3300053736 Bacteria 7159
180 2509117981 2508501123 Bacteria 6283661
181 2509395284 2509276022 Bacteria 6200534
182 2513610285 2513237090 Bacteria 7096802
183 2513696714 2513237101 Bacteria 7952346
184 2514417144 2513237305 Bacteria 7293571
185 2515626972 2515154112 Bacteria 8294334
186 2599940881 2599185301 Bacteria 6161860
187 2723574974 2721755686 Bacteria 7343952
188 2874592985 2874590934 Bacteria 8299676
189 2874647601 2874645413 Bacteria 8214782
190 2876779218 2876771140 Bacteria 8287509
191 2876820137 2876818435 Bacteria 8274608
192 2879076641 2879074833 Bacteria 8279565
193 2879129416 2879127579 Bacteria 8294491
194 2879145349 2879142872 Bacteria 8267021
195 2881153373 2881147464 Bacteria 7779814
196 2889795086 2889790730 Bacteria 5689708
197 2924768245 2924762789 Bacteria 6561353
198 2935981155 2935975950 Bacteria 8347125
199 2937851069 2937848649 Bacteria 6983481
200 2958069132 2958064165 Bacteria 7158582
201 2977871169 2977864932 Bacteria 7534097
202 2977926213 2977922695 Bacteria 6956781
203 2987671335 2987666974 Bacteria 6509233
204 2996312501 2996310559 Bacteria 6357320
205 3000139744 3000135777 Bacteria 6891109
206 3004215188 3004211236 Bacteria 7417683
207 3004220771 3004218560 Bacteria 7421728
208 3004335568 3004334049 Bacteria 8449246
209 8019619358 8019619141 Bacteria 9218857
210 8019633757 8019629233 Bacteria 8687553
211 8019661637 8019659431 Bacteria 8577854
212 8019671166 8019668869 Bacteria 8791617
213 Ga0495584_0049252
214 JGI25153J46596_10006848
215 Ga0055539_1004158
216 Ga0070670_100094388
217 Ga0070670_100136328
218 Ga0068869_100007319
219 Ga0068869_100199358
220 Ga0070680_100153370
221 Ga0070668_100120524
222 Ga0070713_100012312
223 Ga0070663_100045136
224 Ga0070698_100087374
225 Ga0070698_100391280
226 Ga0070679_100007812
227 Ga0068853_100380616
228 Ga0070665_100156928
229 Ga0068855_100124855
230 Ga0068855_100193339
231 Ga0068856_100212316
232 Ga0068856_100341449
233 Ga0068859_100146471
234 Ga0068863_100058295
235 Ga0068863_100242992
236 Ga0081455_10023797
237 Ga0081455_10048684
238 Ga0081539_10009059
239 Ga0075365_10028418
240 Ga0075365_10040293
241 Ga0075365_10184231
242 Ga0075368_10009276
243 Ga0075363_100043502
244 Ga0075363_100049546
245 Ga0075364_10222073
246 Ga0070712_100321259
247 Ga0075362_10038660
248 Ga0075367_10002196
249 Ga0075367_10006635
250 Ga0075367_10027773
251 Ga0075369_10027982
252 Ga0075369_10046253
253 Ga0075366_10023327
254 Ga0075370_10009584
255 Ga0075370_10128127
256 Ga0075434_100257949
257 Ga0097620_100146467
258 Ga0105240_10109327
259 Ga0105247_10011403
260 Ga0114129_10340480
261 Ga0105242_10321344
262 Ga0105248_10000001
263 Ga0105237_10080194
264 Ga0105249_10363944
265 Ga0105249_10376782
266 Ga0105239_10236761
267 Ga0105239_10256941
268 Ga0157370_10193617
269 Ga0157370_10235184
270 Ga0171462_1014
271 Ga0171462_1041
272 Ga0157378_10004228
273 Ga0163163_10069094
274 Ga0209677_101886
275 Ga0209455_1007378
276 Ga0209758_1000761
277 Ga0207710_10016591
278 Ga0207707_10019395
279 Ga0207695_10061707
280 Ga0207695_10167590
281 Ga0207671_10033856
282 Ga0207660_10111560
283 Ga0207652_10007791
284 Ga0207646_10099340
285 Ga0207650_10099738
286 Ga0207711_10000001
287 Ga0207667_10244552
288 Ga0207668_10028553
289 Ga0207668_10138536
290 Ga0207668_10228170
291 Ga0207658_10169592
292 Ga0207677_10354040
293 Ga0207678_10092018
294 Ga0207641_10280117
295 Ga0207675_100319240
296 Ga0209813_10007124
297 Ga0268266_10316137
298 Ga0307515_10081837
299 Ga0307509_10035928
300 Ga0307509_10076651
301 Ga0307516_10046556
302 Ga0307510_10048857
303 Ga0373943_0057022
304 Ga0395899_0101884
305 Ga0395900_0045064
306 Ga0395900_0203018
307 Ga0395898_0021411
308 Ga0395905_0017805
309 Ga0395901_0057814
310 Ga0395901_0058348
311 Ga0395901_0061764
312 Ga0395901_0088006
313 Ga0395901_0113608
314 Ga0395901_0199805
315 Ga0436365_0704281
316 Ga0439465_0008593
317 Ga0466972_0004591
318 Ga0466964_0001221
319 Ga0466970_0078935
320 Ga0495638_0002335
321 Ga0495638_0028453
322 Ga0495638_0030116
323 Ga0495585_0049546
324 Ga0495606_0039029
325 Ga0495616_0041554
326 Ga0495620_0046338
327 Ga0495648_0025228
328 Ga0495609_0024323
329 Ga0495645_0078463
330 Ga0495633_0044703
331 Ga0495656_0021999
332 Ga0495668_0011187
333 Ga0495611_0084461
334 Ga0495625_0124465
335 Ga0495589_0035657
336 Ga0495673_0053816
337 Ga0496104_0032158
338 Ga0496105_0015893
339 Ga0496108_0010234
340 Ga0496109_0244808
341 Ga0496113_0156398
342 Ga0496118_0023568
343 Ga0496121_0000191
344 Ga0496121_0112715
345 Ga0496122_0054397
346 Ga0496124_0002311
347 Ga0496125_0015093
348 Ga0496126_0001250
349 Ga0496126_0004462
350 Ga0496126_0023370
351 nmdc:mga03683_150554_c1
352 nmdc:mga03n38_30663_c1
353 nmdc:mga03n38_84483_c1
354 nmdc:mga00v17_16192_c1
355 nmdc:mga00v17_48328_c1
356 nmdc:mga00v17_53148_c1
357 nmdc:mga0yw44_57428_c1
358 nmdc:mga0yw44_67388_c1
359 nmdc:mga0k408_9316_c1
360 nmdc:mga06z11_17452_c1
361 nmdc:mga06z11_53884_c1
362 nmdc:mga06z11_6244_c1
363 nmdc:mga06z11_78856_c1
364 nmdc:mga06z11_90215_c1
365 nmdc:mga04h51_17265_c1
366 nmdc:mga04h51_24792_c1
367 nmdc:mga07m45_5640_c1
368 nmdc:mga07m45_74767_c1
369 nmdc:mga0sz30_1053_c1
370 nmdc:mga0sz30_112904_c1
371 nmdc:mga0sz30_35118_c1
372 nmdc:mga0sz30_488_c1
373 Ga0495619_0066974
374 Ga0500578_0030674
375 Ga0500651_0074865
376 Ga0500556_0002546
377 Ga0500642_0000021
378 Ga0500658_0021042
379 Ga0500559_0016287
380 Ga0500568_0000175
381 Ga0500573_0029279
382 Ga0500577_0081716
383 Ga0500588_0067562
384 Ga0500590_107539
385 Ga0500616_0000006
386 Ga0500616_0026256
387 Ga0500616_0071649
388 Ga0500622_0033115
389 Ga0500634_0089797
390 Ga0500596_004514
391 Ga0500599_000118
392 2509117981
393 2509395284
394 2513610285
395 2513696714
396 2514417144
397 2515626972
398 2599940881
399 2723574974
400 2874592985
401 2874647601
402 2876779218
403 2876820137
404 2879076641
405 2879129416
406 2879145349
407 2881153373
408 2889795086
409 2924768245
410 2935981155
411 2937851069
412 2958069132
413 2977871169
414 2977926213
415 2987671335
416 2996312501
417 3000139744
418 3004215188
419 3004220771
420 3004335568
421 8019619358
422 8019633757
423 8019661637
424 8019671166

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

115

164

0.9

PF13437

HlyD_3

HlyD family secretion protein

212

311

0.88

Map