F323186

General Info

Members Datasets Scaffolds Average Seq Length
212 140 424 101

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0207190|Ga0466958_0207190_492_836
Length 114
Sequence MSRPDAVRVTIFNQSYSLLASGEEPGRVEELAQRVDDLMHSIASKGGNIDSTRIAVLACLHLADQLQTVQEDLAKLRDTVSNKAREYALLLDEAIDPAEDQRPGEPRTFLHSGE

Samples

Sample ID Description Type Environment
1 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
55 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
94 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
97 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
98 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
99 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
100 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
101 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
120 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
121 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
125 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300059503 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 21R_SD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.81
Metatranscriptomes 5.19
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.89
Rhizosphere 94.81
Stem 0
Stem Tuber 0
Unclassified 44.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466958_0207190 3300045836 Bacteria 1249
2 Ga0058859_11607696 3300004798 Bacteria 1442
3 Ga0058863_10003491 3300004799 Bacteria 1285
4 Ga0058861_11635338 3300004800 Unclassified 513
5 Ga0058861_11773797 3300004800 Bacteria 1400
6 Ga0058862_12665423 3300004803 Bacteria 1374
7 Ga0070658_10004306 3300005327 Bacteria 11635
8 Ga0070683_100059361 3300005329 Bacteria 3554
9 Ga0070683_101804801 3300005329 Unclassified 588
10 Ga0070690_100802934 3300005330 Unclassified 730
11 Ga0070680_100005738 3300005336 Bacteria 9419
12 Ga0070680_100167122 3300005336 Bacteria 1850
13 Ga0070680_100354675 3300005336 Bacteria 1247
14 Ga0070660_100182569 3300005339 Bacteria 1698
15 Ga0070660_100317591 3300005339 Bacteria 1279
16 Ga0070669_100192304 3300005353 Bacteria 1601
17 Ga0070669_101346091 3300005353 Unclassified 619
18 Ga0070673_100012766 3300005364 Bacteria 5780
19 Ga0070673_102220779 3300005364 Bacteria 522
20 Ga0070667_101849433 3300005367 Unclassified 568
21 Ga0070667_102036480 3300005367 Unclassified 541
22 Ga0070709_10409502 3300005434 Unclassified 1014
23 Ga0070714_100003509 3300005435 Bacteria 11706
24 Ga0070714_100139842 3300005435 Bacteria 2172
25 Ga0070713_100007038 3300005436 Bacteria 7856
26 Ga0070713_102075620 3300005436 Unclassified 551
27 Ga0070711_100128095 3300005439 Bacteria 1887
28 Ga0070708_101974836 3300005445 Bacteria 540
29 Ga0070678_101499676 3300005456 Unclassified 631
30 Ga0070681_10215339 3300005458 Bacteria 1837
31 Ga0070679_100243608 3300005530 Bacteria 1755
32 Ga0070679_100401656 3300005530 Bacteria 1316
33 Ga0070679_100856185 3300005530 Unclassified 852
34 Ga0070684_100227925 3300005535 Bacteria 1701
35 Ga0070684_101999573 3300005535 Unclassified 547
36 Ga0068853_102197750 3300005539 Unclassified 535
37 Ga0070686_101675454 3300005544 Unclassified 539
38 Ga0070665_101512116 3300005548 Bacteria 680
39 Ga0070665_101947998 3300005548 Bacteria 593
40 Ga0068855_100078182 3300005563 Bacteria 3838
41 Ga0068855_100219756 3300005563 Bacteria 2131
42 Ga0068855_101513308 3300005563 Unclassified 689
43 Ga0068856_100389768 3300005614 Bacteria 1413
44 Ga0068852_100278241 3300005616 Bacteria 1612
45 Ga0068866_10836977 3300005718 Unclassified 642
46 Ga0068861_100957843 3300005719 Bacteria 814
47 Ga0068861_101524612 3300005719 Unclassified 656
48 Ga0068863_100041236 3300005841 Bacteria 4389
49 Ga0068858_100456342 3300005842 Bacteria 1232
50 Ga0068858_101010165 3300005842 Unclassified 815
51 Ga0068860_100567162 3300005843 Unclassified 1138
52 Ga0068860_100766580 3300005843 Unclassified 977
53 Ga0070717_10006693 3300006028 Bacteria 8500
54 Ga0070717_10067085 3300006028 Unclassified 2984
55 Ga0070717_11086221 3300006028 Unclassified 729
56 Ga0070716_101165745 3300006173 Unclassified 617
57 Ga0097621_100216814 3300006237 Bacteria 1666
58 Ga0097621_100390552 3300006237 Bacteria 1244
59 Ga0075433_10594791 3300006852 Unclassified 971
60 Ga0075433_10862788 3300006852 Unclassified 790
61 Ga0075436_100316289 3300006914 Unclassified 1121
62 Ga0075436_100798043 3300006914 Unclassified 703
63 Ga0075436_100890701 3300006914 Bacteria 665
64 Ga0075435_100639490 3300007076 Unclassified 923
65 Ga0105240_10002787 3300009093 Bacteria 27631
66 Ga0105247_10375857 3300009101 Unclassified 1006
67 Ga0114129_10061828 3300009147 Bacteria 5233
68 Ga0114129_10827095 3300009147 Bacteria 1179
69 Ga0105242_10232109 3300009176 Bacteria 1654
70 Ga0105242_12605001 3300009176 Unclassified 555
71 Ga0105248_10337668 3300009177 Bacteria 1696
72 Ga0105237_10004101 3300009545 Bacteria 16988
73 Ga0105249_10020139 3300009553 Bacteria 5959
74 Ga0105239_10359118 3300010375 Bacteria 1645
75 Ga0157370_10002294 3300013104 Bacteria 23184
76 Ga0157370_10561287 3300013104 Bacteria 1046
77 Ga0157369_10071930 3300013105 Bacteria 3712
78 Ga0157369_10509898 3300013105 Bacteria 1244
79 Ga0157378_10206019 3300013297 Bacteria 1863
80 Ga0157378_10977009 3300013297 Unclassified 880
81 Ga0157378_12645396 3300013297 Unclassified 554
82 Ga0163162_10241423 3300013306 Unclassified 1938
83 Ga0163162_10829257 3300013306 Unclassified 1041
84 Ga0163162_13468555 3300013306 Unclassified 502
85 Ga0157372_10267742 3300013307 Bacteria 1985
86 Ga0157372_10926207 3300013307 Bacteria 1010
87 Ga0157376_10973644 3300014969 Bacteria 870
88 Ga0157376_11472000 3300014969 Unclassified 714
89 Ga0206355_1197320 3300020076 Bacteria 1416
90 Ga0206352_10694939 3300020078 Unclassified 838
91 Ga0206354_10774688 3300020081 Unclassified 571
92 Ga0206353_10744735 3300020082 Unclassified 873
93 Ga0213876_10570018 3300021384 Unclassified 602
94 Ga0213875_10003606 3300021388 Bacteria 8757
95 Ga0207642_10912593 3300025899 Unclassified 563
96 Ga0207699_10252059 3300025906 Bacteria 1217
97 Ga0207707_10025207 3300025912 Bacteria 5202
98 Ga0207707_10603402 3300025912 Unclassified 929
99 Ga0207695_10099638 3300025913 Bacteria 2903
100 Ga0207695_10232243 3300025913 Bacteria 1748
101 Ga0207671_10083639 3300025914 Bacteria 2396
102 Ga0207663_10354594 3300025916 Bacteria 1111
103 Ga0207660_10039935 3300025917 Bacteria 3282
104 Ga0207660_10133386 3300025917 Unclassified 1893
105 Ga0207660_10335966 3300025917 Bacteria 1209
106 Ga0207657_10235968 3300025919 Bacteria 1461
107 Ga0207652_10262337 3300025921 Bacteria 1558
108 Ga0207652_10776661 3300025921 Unclassified 852
109 Ga0207681_10182198 3300025923 Bacteria 1601
110 Ga0207681_11500526 3300025923 Unclassified 565
111 Ga0207700_10000687 3300025928 Bacteria 19717
112 Ga0207664_10007046 3300025929 Bacteria 7787
113 Ga0207664_10117513 3300025929 Bacteria 2220
114 Ga0207644_10387613 3300025931 Bacteria 1140
115 Ga0207686_10196879 3300025934 Bacteria 1440
116 Ga0207711_10966689 3300025941 Unclassified 791
117 Ga0207689_11031647 3300025942 Unclassified 694
118 Ga0207661_10033240 3300025944 Bacteria 4002
119 Ga0207667_10004176 3300025949 Bacteria 17739
120 Ga0207667_10119590 3300025949 Bacteria 2715
121 Ga0207667_11287785 3300025949 Unclassified 708
122 Ga0207651_10045434 3300025960 Bacteria 2946
123 Ga0207658_10601756 3300025986 Unclassified 988
124 Ga0207703_10370704 3300026035 Unclassified 1322
125 Ga0207703_10739414 3300026035 Bacteria 937
126 Ga0207703_11489256 3300026035 Bacteria 651
127 Ga0207639_11871257 3300026041 Bacteria 561
128 Ga0207702_10645809 3300026078 Bacteria 1040
129 Ga0207641_10040379 3300026088 Unclassified 3907
130 Ga0207675_100647327 3300026118 Bacteria 1063
131 Ga0207675_100879135 3300026118 Unclassified 912
132 Ga0207683_11460874 3300026121 Unclassified 632
133 Ga0207698_10310895 3300026142 Bacteria 1471
134 Ga0268266_10863482 3300028379 Bacteria 875
135 Ga0268264_10505931 3300028381 Unclassified 1179
136 Ga0265338_10389703 3300028800 Unclassified 995
137 Ga0265338_10784101 3300028800 Unclassified 654
138 Ga0265760_10032121 3300031090 Bacteria 1549
139 Ga0265325_10355562 3300031241 Unclassified 646
140 Ga0265325_10404208 3300031241 Unclassified 598
141 Ga0265316_10165619 3300031344 Unclassified 1651
142 Ga0265316_10878982 3300031344 Unclassified 627
143 Ga0373926_0041830 3300035083 Bacteria 1638
144 Ga0373934_0381654 3300035086 Unclassified 588
145 Ga0373953_0176128 3300035117 Bacteria 922
146 Ga0373953_0525600 3300035117 Unclassified 525
147 Ga0373954_0010694 3300035118 Bacteria 4056
148 Ga0373954_0133393 3300035118 Unclassified 1210
149 Ga0373956_0162102 3300035119 Bacteria 1054
150 Ga0373955_0149055 3300035172 Bacteria 1376
151 Ga0373955_0350780 3300035172 Unclassified 894
152 Ga0373924_0539952 3300035410 Bacteria 525
153 Ga0373931_0980359 3300035691 Unclassified 571
154 Ga0373935_0038469 3300035692 Bacteria 2996
155 Ga0373935_0103502 3300035692 Unclassified 1880
156 Ga0373935_1121573 3300035692 Bacteria 586
157 Ga0373927_0000816 3300035695 Bacteria 23841
158 Ga0373927_0001450 3300035695 Bacteria 17885
159 Ga0373927_0055881 3300035695 Unclassified 2552
160 Ga0373927_0072024 3300035695 Archaea 2237
161 Ga0373927_0804837 3300035695 Bacteria 621
162 Ga0373927_0866955 3300035695 Unclassified 596
163 Ga0373927_1131924 3300035695 Unclassified 516
164 Ga0373933_0909245 3300035724 Unclassified 579
165 Ga0373947_0189599 3300035725 Unclassified 1341
166 Ga0373947_0561213 3300035725 Bacteria 777
167 Ga0373947_0819449 3300035725 Unclassified 635
168 Ga0373925_0289454 3300037068 Unclassified 1321
169 Ga0373925_1131057 3300037068 Unclassified 644
170 Ga0395905_0335459 3300037471 Unclassified 1403
171 Ga0436364_0718121 3300037853 Bacteria 2320
172 Ga0436364_1060456 3300037853 Unclassified 650
173 Ga0436364_1249762 3300037853 Unclassified 716
174 Ga0436365_1353335 3300039437 Bacteria 1784
175 Ga0436362_0913093 3300039453 Unclassified 575
176 Ga0453683_0162331 3300044673 Bacteria 1414
177 Ga0466966_0485556 3300044684 Unclassified 743
178 Ga0466961_0127083 3300044693 Bacteria 1598
179 Ga0466959_0363792 3300045049 Bacteria 985
180 Ga0451576_0017166 3300045051 Bacteria 7962
181 Ga0466967_1005272 3300045976 Unclassified 830
182 Ga0495651_0642750 3300046462 Bacteria 666
183 Ga0495580_0002896 3300046472 Bacteria 14751
184 Ga0495580_0021850 3300046472 Bacteria 4719
185 Ga0495580_0057202 3300046472 Bacteria 2745
186 Ga0495580_0370167 3300046472 Unclassified 969
187 Ga0495639_0580837 3300046475 Bacteria 575
188 Ga0495664_0114999 3300046477 Bacteria 1626
189 Ga0495594_0036558 3300046499 Bacteria 2678
190 Ga0495665_0031472 3300046531 Bacteria 2840
191 Ga0495645_0614010 3300046543 Unclassified 668
192 Ga0495645_0756554 3300046543 Unclassified 586
193 Ga0495635_0483502 3300046663 Bacteria 816
194 Ga0495670_0512368 3300046691 Unclassified 652
195 Ga0495636_0636304 3300047318 Bacteria 523
196 Ga0495674_0557253 3300047319 Bacteria 912
197 Ga0495684_0026958 3300047471 Unclassified 4415
198 Ga0496105_0535721 3300048908 Unclassified 916
199 Ga0496110_1041613 3300048913 Unclassified 726
200 Ga0496111_0813261 3300048914 Unclassified 676
201 Ga0496114_1220450 3300048917 Unclassified 638
202 Ga0501047_0079103 3300049581 Bacteria 3162
203 Ga0501080_0550889 3300049742 Bacteria 1027
204 Ga0501083_0443837 3300049744 Unclassified 844
205 nmdc:mga05p37_23408_c1 3300050507 Bacteria 7494
206 nmdc:mga0rr50_1668104_c1 3300050513 Unclassified 537
207 nmdc:mga08x19_794367_c1 3300050514 Bacteria 672
208 nmdc:mga08x19_90011_c1 3300050514 Unclassified 2024
209 nmdc:mga0a205_1569447_c1 3300050515 Unclassified 507
210 nmdc:mga0a205_876030_c1 3300050515 Unclassified 745
211 Ga0587080_013450 3300059503 Bacteria 1253
212 Ga0501082_1902656 3300060353 Unclassified 519
213 Ga0466958_0207190
214 Ga0058859_11607696
215 Ga0058863_10003491
216 Ga0058861_11635338
217 Ga0058861_11773797
218 Ga0058862_12665423
219 Ga0070658_10004306
220 Ga0070683_100059361
221 Ga0070683_101804801
222 Ga0070690_100802934
223 Ga0070680_100005738
224 Ga0070680_100167122
225 Ga0070680_100354675
226 Ga0070660_100182569
227 Ga0070660_100317591
228 Ga0070669_100192304
229 Ga0070669_101346091
230 Ga0070673_100012766
231 Ga0070673_102220779
232 Ga0070667_101849433
233 Ga0070667_102036480
234 Ga0070709_10409502
235 Ga0070714_100003509
236 Ga0070714_100139842
237 Ga0070713_100007038
238 Ga0070713_102075620
239 Ga0070711_100128095
240 Ga0070708_101974836
241 Ga0070678_101499676
242 Ga0070681_10215339
243 Ga0070679_100243608
244 Ga0070679_100401656
245 Ga0070679_100856185
246 Ga0070684_100227925
247 Ga0070684_101999573
248 Ga0068853_102197750
249 Ga0070686_101675454
250 Ga0070665_101512116
251 Ga0070665_101947998
252 Ga0068855_100078182
253 Ga0068855_100219756
254 Ga0068855_101513308
255 Ga0068856_100389768
256 Ga0068852_100278241
257 Ga0068866_10836977
258 Ga0068861_100957843
259 Ga0068861_101524612
260 Ga0068863_100041236
261 Ga0068858_100456342
262 Ga0068858_101010165
263 Ga0068860_100567162
264 Ga0068860_100766580
265 Ga0070717_10006693
266 Ga0070717_10067085
267 Ga0070717_11086221
268 Ga0070716_101165745
269 Ga0097621_100216814
270 Ga0097621_100390552
271 Ga0075433_10594791
272 Ga0075433_10862788
273 Ga0075436_100316289
274 Ga0075436_100798043
275 Ga0075436_100890701
276 Ga0075435_100639490
277 Ga0105240_10002787
278 Ga0105247_10375857
279 Ga0114129_10061828
280 Ga0114129_10827095
281 Ga0105242_10232109
282 Ga0105242_12605001
283 Ga0105248_10337668
284 Ga0105237_10004101
285 Ga0105249_10020139
286 Ga0105239_10359118
287 Ga0157370_10002294
288 Ga0157370_10561287
289 Ga0157369_10071930
290 Ga0157369_10509898
291 Ga0157378_10206019
292 Ga0157378_10977009
293 Ga0157378_12645396
294 Ga0163162_10241423
295 Ga0163162_10829257
296 Ga0163162_13468555
297 Ga0157372_10267742
298 Ga0157372_10926207
299 Ga0157376_10973644
300 Ga0157376_11472000
301 Ga0206355_1197320
302 Ga0206352_10694939
303 Ga0206354_10774688
304 Ga0206353_10744735
305 Ga0213876_10570018
306 Ga0213875_10003606
307 Ga0207642_10912593
308 Ga0207699_10252059
309 Ga0207707_10025207
310 Ga0207707_10603402
311 Ga0207695_10099638
312 Ga0207695_10232243
313 Ga0207671_10083639
314 Ga0207663_10354594
315 Ga0207660_10039935
316 Ga0207660_10133386
317 Ga0207660_10335966
318 Ga0207657_10235968
319 Ga0207652_10262337
320 Ga0207652_10776661
321 Ga0207681_10182198
322 Ga0207681_11500526
323 Ga0207700_10000687
324 Ga0207664_10007046
325 Ga0207664_10117513
326 Ga0207644_10387613
327 Ga0207686_10196879
328 Ga0207711_10966689
329 Ga0207689_11031647
330 Ga0207661_10033240
331 Ga0207667_10004176
332 Ga0207667_10119590
333 Ga0207667_11287785
334 Ga0207651_10045434
335 Ga0207658_10601756
336 Ga0207703_10370704
337 Ga0207703_10739414
338 Ga0207703_11489256
339 Ga0207639_11871257
340 Ga0207702_10645809
341 Ga0207641_10040379
342 Ga0207675_100647327
343 Ga0207675_100879135
344 Ga0207683_11460874
345 Ga0207698_10310895
346 Ga0268266_10863482
347 Ga0268264_10505931
348 Ga0265338_10389703
349 Ga0265338_10784101
350 Ga0265760_10032121
351 Ga0265325_10355562
352 Ga0265325_10404208
353 Ga0265316_10165619
354 Ga0265316_10878982
355 Ga0373926_0041830
356 Ga0373934_0381654
357 Ga0373953_0176128
358 Ga0373953_0525600
359 Ga0373954_0010694
360 Ga0373954_0133393
361 Ga0373956_0162102
362 Ga0373955_0149055
363 Ga0373955_0350780
364 Ga0373924_0539952
365 Ga0373931_0980359
366 Ga0373935_0038469
367 Ga0373935_0103502
368 Ga0373935_1121573
369 Ga0373927_0000816
370 Ga0373927_0001450
371 Ga0373927_0055881
372 Ga0373927_0072024
373 Ga0373927_0804837
374 Ga0373927_0866955
375 Ga0373927_1131924
376 Ga0373933_0909245
377 Ga0373947_0189599
378 Ga0373947_0561213
379 Ga0373947_0819449
380 Ga0373925_0289454
381 Ga0373925_1131057
382 Ga0395905_0335459
383 Ga0436364_0718121
384 Ga0436364_1060456
385 Ga0436364_1249762
386 Ga0436365_1353335
387 Ga0436362_0913093
388 Ga0453683_0162331
389 Ga0466966_0485556
390 Ga0466961_0127083
391 Ga0466959_0363792
392 Ga0451576_0017166
393 Ga0466967_1005272
394 Ga0495651_0642750
395 Ga0495580_0002896
396 Ga0495580_0021850
397 Ga0495580_0057202
398 Ga0495580_0370167
399 Ga0495639_0580837
400 Ga0495664_0114999
401 Ga0495594_0036558
402 Ga0495665_0031472
403 Ga0495645_0614010
404 Ga0495645_0756554
405 Ga0495635_0483502
406 Ga0495670_0512368
407 Ga0495636_0636304
408 Ga0495674_0557253
409 Ga0495684_0026958
410 Ga0496105_0535721
411 Ga0496110_1041613
412 Ga0496111_0813261
413 Ga0496114_1220450
414 Ga0501047_0079103
415 Ga0501080_0550889
416 Ga0501083_0443837
417 nmdc:mga05p37_23408_c1
418 nmdc:mga0rr50_1668104_c1
419 nmdc:mga08x19_794367_c1
420 nmdc:mga08x19_90011_c1
421 nmdc:mga0a205_1569447_c1
422 nmdc:mga0a205_876030_c1
423 Ga0587080_013450
424 Ga0501082_1902656

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05164

ZapA

Cell division protein ZapA

7

98

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6qbt-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (trimeric form) 0.9298 29 59
7ouf-assembly1.cif.gz_E structure of the stlv intasome:b56 complex bound to the strand-transfer inhibitor xz450 0.9055 26 59
6qbv-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.9024 30 59
7pel-assembly1.cif.gz_E cryoem structure of simian t-cell lymphotropic virus intasome in complex with pp2a regulatory subunit b56 gamma 0.8917 29 59
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8875 29 59
ID Description Score Start End Superfamily
af_D4A400_116_644_1.10.640.10 Mainly Alpha;Orthogonal Bundle;Myeloperoxidase, subunit C;Haem peroxidase domain superfamily, animal type 0.9199 26 59 1.10.640.10
af_P21614_414_474_1.10.246.10 Mainly Alpha;Orthogonal Bundle;Serum Albumin; Chain A, Domain 1; 0.9165 34 62 1.10.246.10
af_Q9VEP3_79_644_1.10.640.10 Mainly Alpha;Orthogonal Bundle;Myeloperoxidase, subunit C;Haem peroxidase domain superfamily, animal type 0.9157 26 59 1.10.640.10
1j7eA05 Mainly Alpha;Orthogonal Bundle;Serum Albumin; Chain A, Domain 1; 0.9156 34 62 1.10.246.10
1j78A05 Mainly Alpha;Orthogonal Bundle;Serum Albumin; Chain A, Domain 1; 0.9078 34 62 1.10.246.10
ID Description Score Start End GO Terms
AF-A0A2T0BGC3-F1-model_v4 Cell division protein ZapA (Z ring-associated protein ZapA) 0.9922 8 97 GO:0000917
GO:0000921
GO:0005829
GO:0030428
GO:0032153
GO:0043093
AF-A0A4U9RL41-F1-model_v4 Cell division protein ZapA (Z ring-associated protein ZapA) 0.9878 7 97 GO:0000917
GO:0000921
GO:0005829
GO:0016020
GO:0030428
GO:0032153
GO:0043093
AF-A0A2Z4WBK6-F1-model_v4 Cell division protein ZapA 0.9874 6 98
AF-N9WFQ8-F1-model_v4 Cell division protein ZapA (Z ring-associated protein ZapA) 0.9869 8 97 GO:0000917
GO:0000921
GO:0005829
GO:0030428
GO:0032153
GO:0043093
AF-A0A6N3FYF5-F1-model_v4 Cell division protein ZapA (Z ring-associated protein ZapA) 0.9868 8 97 GO:0000917
GO:0000921
GO:0005829
GO:0030428
GO:0032153
GO:0043093

Map