F321184

General Info

Members Datasets Scaffolds Average Seq Length
211 130 422 335

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100387076|Ga0070683_1003870762
Length 358
Sequence VGYRSARRDRAIVRVAPPRPAYSRLDVSRIKTTVVGSYPVLPWMVGHPSRLVLRDAVMAVLKTQELAGLDLVTDGELQRFDANHPEANGMVDYFVAQLDGIRKAVSPSDFERWRADRAAGYQLPGATVIGKIGPGTLNLPRDCDLTRSLTRSSLKFTCTGPHMLARMLDNRHYPDLPELAMDLAGVLRQQLELVEADVVQLDEAAIAGSPQDARWAAEAINHVLDGVLCDTAVHICFGNYGGQPMLRGFWRDLIPFLNALHADHLVLEFARRGYDELDAFRDLDPRIGLGIGVIDIKDNEVESPELIASRLERIVDALGPGRLHYAHPDCGFWMLQRSVVDRKIQALVTGRDLYEGRL

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
49 3300022734 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 Metagenome Rhizosphere
50 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
70 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
71 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
90 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
91 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
105 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
106 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
107 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
108 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
109 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
112 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
113 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
114 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
115 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
127 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
128 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
129 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
130 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.53
Metatranscriptomes 0.47
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.47
Nodule 0
Rhizoplane 0.95
Rhizosphere 98.58
Stem 0
Stem Tuber 0
Unclassified 11.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100387076 3300005329 Bacteria 1333
2 Ga0070677_10089755 3300005333 Bacteria 1334
3 Ga0068869_100187697 3300005334 Bacteria 1624
4 Ga0070687_100020817 3300005343 Bacteria 3073
5 Ga0070692_10068904 3300005345 Bacteria 1881
6 Ga0070669_100104268 3300005353 Bacteria 2144
7 Ga0070675_100217312 3300005354 Bacteria 1663
8 Ga0070673_100038463 3300005364 Bacteria 3654
9 Ga0070688_100059948 3300005365 Bacteria 2402
10 Ga0070709_10095498 3300005434 Bacteria 1969
11 Ga0070705_100073449 3300005440 Unclassified 2075
12 Ga0070705_100096468 3300005440 Bacteria 1856
13 Ga0070705_100113181 3300005440 Bacteria 1738
14 Ga0070694_100018038 3300005444 Bacteria 4472
15 Ga0070708_100011476 3300005445 Bacteria 7211
16 Ga0070708_100030275 3300005445 Bacteria 4678
17 Ga0070681_10030907 3300005458 Bacteria 5375
18 Ga0070707_100151438 3300005468 Bacteria 2258
19 Ga0070698_100094434 3300005471 Bacteria 2970
20 Ga0070699_100000644 3300005518 Bacteria 32680
21 Ga0070699_100052003 3300005518 Unclassified 3547
22 Ga0070699_100059628 3300005518 Bacteria 3306
23 Ga0070699_100302309 3300005518 Bacteria 1435
24 Ga0070679_100183059 3300005530 Bacteria 2067
25 Ga0070697_100000148 3300005536 Bacteria 57034
26 Ga0070697_100066955 3300005536 Bacteria 2937
27 Ga0070697_100071743 3300005536 Bacteria 2841
28 Ga0070697_100453639 3300005536 Bacteria 1117
29 Ga0070672_100070664 3300005543 Bacteria 2774
30 Ga0070686_100069413 3300005544 Bacteria 2302
31 Ga0070695_100009765 3300005545 Bacteria 5715
32 Ga0070695_100094657 3300005545 Bacteria 2001
33 Ga0070696_100015808 3300005546 Bacteria 5072
34 Ga0070704_100018180 3300005549 Bacteria 4488
35 Ga0068856_100038782 3300005614 Bacteria 4677
36 Ga0068852_100262881 3300005616 Bacteria 1658
37 Ga0068860_100257335 3300005843 Bacteria 1701
38 Ga0097621_100065038 3300006237 Bacteria 3000
39 Ga0097621_100349277 3300006237 Unclassified 1315
40 Ga0068871_100238572 3300006358 Bacteria 1580
41 Ga0068871_100288376 3300006358 Unclassified 1438
42 Ga0075428_100012421 3300006844 Bacteria 9473
43 Ga0075430_100014109 3300006846 Bacteria 6812
44 Ga0075431_100056373 3300006847 Bacteria 4053
45 Ga0075431_100131942 3300006847 Unclassified 2576
46 Ga0075431_100195095 3300006847 Bacteria 2073
47 Ga0075433_10000034 3300006852 Bacteria 55071
48 Ga0075433_10043422 3300006852 Bacteria 3902
49 Ga0075433_10065764 3300006852 Bacteria 3181
50 Ga0075433_10329358 3300006852 Bacteria 1350
51 Ga0075434_100000059 3300006871 Bacteria 55358
52 Ga0075434_100000848 3300006871 Bacteria 24312
53 Ga0075436_100007109 3300006914 Bacteria 7663
54 Ga0075436_100014696 3300006914 Bacteria 5366
55 Ga0075436_100016567 3300006914 Bacteria 5046
56 Ga0075436_100025621 3300006914 Bacteria 4059
57 Ga0075436_100072785 3300006914 Unclassified 2378
58 Ga0075435_100000043 3300007076 Bacteria 64194
59 Ga0075435_100000221 3300007076 Bacteria 35103
60 Ga0075435_100304837 3300007076 Unclassified 1362
61 Ga0105240_10662474 3300009093 Bacteria 1143
62 Ga0111539_10023177 3300009094 Bacteria 7625
63 Ga0111539_10061198 3300009094 Bacteria 4461
64 Ga0105245_10096049 3300009098 Bacteria 2734
65 Ga0114129_10052296 3300009147 Bacteria 5733
66 Ga0114129_10065492 3300009147 Bacteria 5071
67 Ga0114129_10135473 3300009147 Bacteria 3379
68 Ga0105248_10326046 3300009177 Bacteria 1730
69 Ga0105237_10309436 3300009545 Bacteria 1583
70 Ga0105249_10351600 3300009553 Unclassified 1493
71 Ga0157374_10050754 3300013296 Bacteria 3857
72 Ga0157378_10001146 3300013297 Bacteria 24057
73 Ga0157380_10131865 3300014326 Bacteria 2133
74 Ga0157380_10190730 3300014326 Bacteria 1809
75 Ga0163161_10172564 3300017792 Bacteria 1654
76 Ga0224569_100736 3300022732 Unclassified 2793
77 Ga0224571_100003 3300022734 Bacteria 7599
78 Ga0228598_1002691 3300024227 Unclassified 3851
79 Ga0228598_1003688 3300024227 Unclassified 3276
80 Ga0207684_10200879 3300025910 Bacteria 1720
81 Ga0207707_10014641 3300025912 Bacteria 6833
82 Ga0207707_10393873 3300025912 Unclassified 1190
83 Ga0207652_10138566 3300025921 Bacteria 2174
84 Ga0207646_10133031 3300025922 Unclassified 2239
85 Ga0207646_10427214 3300025922 Bacteria 1196
86 Ga0207681_10067504 3300025923 Bacteria 2480
87 Ga0207650_10075489 3300025925 Bacteria 2544
88 Ga0207659_10186513 3300025926 Bacteria 1647
89 Ga0207704_10272708 3300025938 Bacteria 1282
90 Ga0207691_10069831 3300025940 Bacteria 3173
91 Ga0207689_10135354 3300025942 Bacteria 2028
92 Ga0207679_10108600 3300025945 Bacteria 2185
93 Ga0207651_10025985 3300025960 Bacteria 3649
94 Ga0207703_10108012 3300026035 Bacteria 2369
95 Ga0207702_10411260 3300026078 Bacteria 1306
96 Ga0207676_10522012 3300026095 Bacteria 1131
97 Ga0207674_10431582 3300026116 Bacteria 1273
98 Ga0207428_10008138 3300027907 Bacteria 9496
99 Ga0268265_10092756 3300028380 Bacteria 2418
100 Ga0265319_1004643 3300028563 Bacteria 6749
101 Ga0265318_10004367 3300028577 Bacteria 6863
102 Ga0265760_10017592 3300031090 Unclassified 2054
103 Ga0265332_10056559 3300031238 Unclassified 1681
104 Ga0265313_10000337 3300031595 Bacteria 50974
105 Ga0265342_10084294 3300031712 Bacteria 1831
106 Ga0373949_0000844 3300035090 Bacteria 9768
107 Ga0373935_0153553 3300035692 Bacteria 1564
108 Ga0373927_0001757 3300035695 Bacteria 16176
109 Ga0373927_0002493 3300035695 Bacteria 13436
110 Ga0373933_0200299 3300035724 Bacteria 1277
111 Ga0373937_0305961 3300036401 Bacteria 1503
112 Ga0373925_0000090 3300037068 Bacteria 97041
113 Ga0373925_0212365 3300037068 Bacteria 1542
114 Ga0453683_0220813 3300044673 Bacteria 1205
115 Ga0495651_0000112 3300046462 Bacteria 59789
116 Ga0495580_0016262 3300046472 Bacteria 5588
117 Ga0495580_0098389 3300046472 Bacteria 2035
118 Ga0495580_0102853 3300046472 Unclassified 1986
119 Ga0495608_0196664 3300046511 Unclassified 1272
120 Ga0495628_0111664 3300046516 Unclassified 2102
121 Ga0495628_0169738 3300046516 Bacteria 1655
122 Ga0495667_0004163 3300046559 Bacteria 9735
123 Ga0495600_0004055 3300046809 Bacteria 8707
124 Ga0495674_0167967 3300047319 Bacteria 1832
125 Ga0495680_0003219 3300047322 Bacteria 16225
126 Ga0495680_0085173 3300047322 Unclassified 2380
127 Ga0495675_0020074 3300047444 Bacteria 4246
128 Ga0496102_0296289 3300048905 Bacteria 1525
129 Ga0496112_0337493 3300048915 Bacteria 1451
130 Ga0501031_0006359 3300049568 Bacteria 7705
131 Ga0501032_0068731 3300049569 Bacteria 2364
132 Ga0501036_0002547 3300049572 Bacteria 14331
133 Ga0501037_0092470 3300049573 Bacteria 2188
134 Ga0501039_0023105 3300049575 Bacteria 4770
135 Ga0501039_0149204 3300049575 Bacteria 1837
136 Ga0501040_0032878 3300049576 Bacteria 3511
137 Ga0501041_0017636 3300049577 Bacteria 4248
138 Ga0501042_0003525 3300049578 Bacteria 9835
139 Ga0501042_0074101 3300049578 Bacteria 2436
140 Ga0501043_0023851 3300049579 Bacteria 4799
141 Ga0501046_0002378 3300049580 Bacteria 17678
142 Ga0501048_0002802 3300049582 Bacteria 13300
143 Ga0501068_0001077 3300049584 Bacteria 14436
144 Ga0501069_0039393 3300049585 Bacteria 2611
145 Ga0501070_0029177 3300049586 Bacteria 4627
146 Ga0501071_0002160 3300049587 Bacteria 11805
147 Ga0501071_0021631 3300049587 Bacteria 4481
148 Ga0501072_0007588 3300049588 Bacteria 8228
149 Ga0501072_0022080 3300049588 Bacteria 4937
150 Ga0501072_0068577 3300049588 Bacteria 2799
151 Ga0501074_0000847 3300049590 Bacteria 19455
152 Ga0501075_0005904 3300049591 Bacteria 8374
153 Ga0501076_0001871 3300049592 Bacteria 14342
154 Ga0501076_0007607 3300049592 Bacteria 7889
155 Ga0501076_0059835 3300049592 Bacteria 3030
156 Ga0501076_0099451 3300049592 Bacteria 2343
157 Ga0501076_0263194 3300049592 Bacteria 1412
158 Ga0501077_0001812 3300049593 Bacteria 12906
159 Ga0501077_0126477 3300049593 Bacteria 1620
160 Ga0501079_0123253 3300049741 Bacteria 2016
161 Ga0501080_0003537 3300049742 Bacteria 13765
162 Ga0501081_0009868 3300049743 Bacteria 6219
163 Ga0501081_0019256 3300049743 Bacteria 4543
164 Ga0501035_0300571 3300049822 Bacteria 1352
165 Ga0501045_0002327 3300049824 Bacteria 12887
166 Ga0501045_0059934 3300049824 Bacteria 2789
167 Ga0501045_0076951 3300049824 Bacteria 2459
168 Ga0501045_0118736 3300049824 Bacteria 1963
169 Ga0501045_0261991 3300049824 Unclassified 1287
170 nmdc:mga05p37_100695_c1 3300050507 Unclassified 3559
171 nmdc:mga05p37_104505_c1 3300050507 Unclassified 3485
172 nmdc:mga05p37_15351_c1 3300050507 Bacteria 9203
173 nmdc:mga05p37_346520_c1 3300050507 Bacteria 1750
174 nmdc:mga05p37_471646_c1 3300050507 Unclassified 1448
175 nmdc:mga05p37_76038_c1 3300050507 Bacteria 4134
176 nmdc:mga0qj67_11240_c1 3300050509 Bacteria 6706
177 nmdc:mga06r32_31536_c1 3300050510 Bacteria 4979
178 nmdc:mga08y16_10391_c1 3300050511 Bacteria 9766
179 nmdc:mga0n895_12670_c1 3300050512 Bacteria 7571
180 nmdc:mga0n895_2030_c1 3300050512 Bacteria 15576
181 nmdc:mga0n895_416_c1 3300050512 Bacteria 28634
182 nmdc:mga0n895_491936_c1 3300050512 Bacteria 1236
183 nmdc:mga0n895_9_c1 3300050512 Bacteria 119566
184 nmdc:mga0rr50_145811_c1 3300050513 Unclassified 1909
185 nmdc:mga0rr50_22586_c1 3300050513 Bacteria 4322
186 nmdc:mga0rr50_46599_c1 3300050513 Bacteria 3193
187 nmdc:mga0rr50_47579_c1 3300050513 Bacteria 3165
188 nmdc:mga0rr50_54450_c1 3300050513 Bacteria 2981
189 nmdc:mga0rr50_62_c1 3300050513 Bacteria 64188
190 nmdc:mga0rr50_67829_c1 3300050513 Bacteria 2711
191 nmdc:mga08x19_10914_c1 3300050514 Bacteria 5464
192 nmdc:mga08x19_1515_c1 3300050514 Bacteria 14397
193 nmdc:mga08x19_16734_c1 3300050514 Bacteria 4477
194 nmdc:mga08x19_273365_c1 3300050514 Bacteria 1170
195 nmdc:mga08x19_4363_c1 3300050514 Bacteria 8387
196 nmdc:mga08x19_461_c1 3300050514 Bacteria 27502
197 nmdc:mga08x19_9816_c1 3300050514 Bacteria 5735
198 nmdc:mga0a205_11021_c1 3300050515 Bacteria 8322
199 nmdc:mga0a205_1964_c1 3300050515 Bacteria 17906
200 nmdc:mga0a205_28570_c1 3300050515 Bacteria 5333
201 nmdc:mga0a205_36913_c1 3300050515 Bacteria 4697
202 nmdc:mga0a205_77535_c1 3300050515 Bacteria 3211
203 Ga0495612_0071152 3300053078 Bacteria 1450
204 Ga0500637_0149051 3300053178 Unclassified 1352
205 Ga0501084_0008750 3300054114 Bacteria 8372
206 Ga0501084_0013196 3300054114 Bacteria 6836
207 Ga0501084_0187788 3300054114 Bacteria 1744
208 Ga0501082_0018169 3300060353 Bacteria 6055
209 Ga0501082_0023687 3300060353 Bacteria 5294
210 Ga0530510_0000820 3300061734 Bacteria 20361
211 Ga0530510_0035502 3300061734 Bacteria 3593
212 Ga0070683_100387076
213 Ga0070677_10089755
214 Ga0068869_100187697
215 Ga0070687_100020817
216 Ga0070692_10068904
217 Ga0070669_100104268
218 Ga0070675_100217312
219 Ga0070673_100038463
220 Ga0070688_100059948
221 Ga0070709_10095498
222 Ga0070705_100073449
223 Ga0070705_100096468
224 Ga0070705_100113181
225 Ga0070694_100018038
226 Ga0070708_100011476
227 Ga0070708_100030275
228 Ga0070681_10030907
229 Ga0070707_100151438
230 Ga0070698_100094434
231 Ga0070699_100000644
232 Ga0070699_100052003
233 Ga0070699_100059628
234 Ga0070699_100302309
235 Ga0070679_100183059
236 Ga0070697_100000148
237 Ga0070697_100066955
238 Ga0070697_100071743
239 Ga0070697_100453639
240 Ga0070672_100070664
241 Ga0070686_100069413
242 Ga0070695_100009765
243 Ga0070695_100094657
244 Ga0070696_100015808
245 Ga0070704_100018180
246 Ga0068856_100038782
247 Ga0068852_100262881
248 Ga0068860_100257335
249 Ga0097621_100065038
250 Ga0097621_100349277
251 Ga0068871_100238572
252 Ga0068871_100288376
253 Ga0075428_100012421
254 Ga0075430_100014109
255 Ga0075431_100056373
256 Ga0075431_100131942
257 Ga0075431_100195095
258 Ga0075433_10000034
259 Ga0075433_10043422
260 Ga0075433_10065764
261 Ga0075433_10329358
262 Ga0075434_100000059
263 Ga0075434_100000848
264 Ga0075436_100007109
265 Ga0075436_100014696
266 Ga0075436_100016567
267 Ga0075436_100025621
268 Ga0075436_100072785
269 Ga0075435_100000043
270 Ga0075435_100000221
271 Ga0075435_100304837
272 Ga0105240_10662474
273 Ga0111539_10023177
274 Ga0111539_10061198
275 Ga0105245_10096049
276 Ga0114129_10052296
277 Ga0114129_10065492
278 Ga0114129_10135473
279 Ga0105248_10326046
280 Ga0105237_10309436
281 Ga0105249_10351600
282 Ga0157374_10050754
283 Ga0157378_10001146
284 Ga0157380_10131865
285 Ga0157380_10190730
286 Ga0163161_10172564
287 Ga0224569_100736
288 Ga0224571_100003
289 Ga0228598_1002691
290 Ga0228598_1003688
291 Ga0207684_10200879
292 Ga0207707_10014641
293 Ga0207707_10393873
294 Ga0207652_10138566
295 Ga0207646_10133031
296 Ga0207646_10427214
297 Ga0207681_10067504
298 Ga0207650_10075489
299 Ga0207659_10186513
300 Ga0207704_10272708
301 Ga0207691_10069831
302 Ga0207689_10135354
303 Ga0207679_10108600
304 Ga0207651_10025985
305 Ga0207703_10108012
306 Ga0207702_10411260
307 Ga0207676_10522012
308 Ga0207674_10431582
309 Ga0207428_10008138
310 Ga0268265_10092756
311 Ga0265319_1004643
312 Ga0265318_10004367
313 Ga0265760_10017592
314 Ga0265332_10056559
315 Ga0265313_10000337
316 Ga0265342_10084294
317 Ga0373949_0000844
318 Ga0373935_0153553
319 Ga0373927_0001757
320 Ga0373927_0002493
321 Ga0373933_0200299
322 Ga0373937_0305961
323 Ga0373925_0000090
324 Ga0373925_0212365
325 Ga0453683_0220813
326 Ga0495651_0000112
327 Ga0495580_0016262
328 Ga0495580_0098389
329 Ga0495580_0102853
330 Ga0495608_0196664
331 Ga0495628_0111664
332 Ga0495628_0169738
333 Ga0495667_0004163
334 Ga0495600_0004055
335 Ga0495674_0167967
336 Ga0495680_0003219
337 Ga0495680_0085173
338 Ga0495675_0020074
339 Ga0496102_0296289
340 Ga0496112_0337493
341 Ga0501031_0006359
342 Ga0501032_0068731
343 Ga0501036_0002547
344 Ga0501037_0092470
345 Ga0501039_0023105
346 Ga0501039_0149204
347 Ga0501040_0032878
348 Ga0501041_0017636
349 Ga0501042_0003525
350 Ga0501042_0074101
351 Ga0501043_0023851
352 Ga0501046_0002378
353 Ga0501048_0002802
354 Ga0501068_0001077
355 Ga0501069_0039393
356 Ga0501070_0029177
357 Ga0501071_0002160
358 Ga0501071_0021631
359 Ga0501072_0007588
360 Ga0501072_0022080
361 Ga0501072_0068577
362 Ga0501074_0000847
363 Ga0501075_0005904
364 Ga0501076_0001871
365 Ga0501076_0007607
366 Ga0501076_0059835
367 Ga0501076_0099451
368 Ga0501076_0263194
369 Ga0501077_0001812
370 Ga0501077_0126477
371 Ga0501079_0123253
372 Ga0501080_0003537
373 Ga0501081_0009868
374 Ga0501081_0019256
375 Ga0501035_0300571
376 Ga0501045_0002327
377 Ga0501045_0059934
378 Ga0501045_0076951
379 Ga0501045_0118736
380 Ga0501045_0261991
381 nmdc:mga05p37_100695_c1
382 nmdc:mga05p37_104505_c1
383 nmdc:mga05p37_15351_c1
384 nmdc:mga05p37_346520_c1
385 nmdc:mga05p37_471646_c1
386 nmdc:mga05p37_76038_c1
387 nmdc:mga0qj67_11240_c1
388 nmdc:mga06r32_31536_c1
389 nmdc:mga08y16_10391_c1
390 nmdc:mga0n895_12670_c1
391 nmdc:mga0n895_2030_c1
392 nmdc:mga0n895_416_c1
393 nmdc:mga0n895_491936_c1
394 nmdc:mga0n895_9_c1
395 nmdc:mga0rr50_145811_c1
396 nmdc:mga0rr50_22586_c1
397 nmdc:mga0rr50_46599_c1
398 nmdc:mga0rr50_47579_c1
399 nmdc:mga0rr50_54450_c1
400 nmdc:mga0rr50_62_c1
401 nmdc:mga0rr50_67829_c1
402 nmdc:mga08x19_10914_c1
403 nmdc:mga08x19_1515_c1
404 nmdc:mga08x19_16734_c1
405 nmdc:mga08x19_273365_c1
406 nmdc:mga08x19_4363_c1
407 nmdc:mga08x19_461_c1
408 nmdc:mga08x19_9816_c1
409 nmdc:mga0a205_11021_c1
410 nmdc:mga0a205_1964_c1
411 nmdc:mga0a205_28570_c1
412 nmdc:mga0a205_36913_c1
413 nmdc:mga0a205_77535_c1
414 Ga0495612_0071152
415 Ga0500637_0149051
416 Ga0501084_0008750
417 Ga0501084_0013196
418 Ga0501084_0187788
419 Ga0501082_0018169
420 Ga0501082_0023687
421 Ga0530510_0000820
422 Ga0530510_0035502

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

30

350

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bq5-assembly1.cif.gz_A crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine (monoclinic) 0.8131 25 353
3rpd-assembly2.cif.gz_B the structure of a b12-independent methionine synthase from shewanella sp. w3-18-1 in complex with selenomethionine. 0.8116 28 357
3ppc-assembly2.cif.gz_B crystal structure of the candida albicans methionine synthase by surface entropy reduction, tyrosine variant with zinc 0.8116 30 358
1xr2-assembly1.cif.gz_A crystal structure of oxidized t. maritima cobalamin-independent methionine synthase complexed with methyltetrahydrofolate 0.8096 25 353
4zty-assembly1.cif.gz_A neurospora crassa cobalamin-independent methionine synthase complexed with cd2+ 0.8081 30 357
ID Description Score Start End Superfamily
af_K7KK03_1_110_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9058 247 358 3.20.20.210
af_K7MME4_84_171_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.901 274 356 3.20.20.210
af_K7KK03_1_110_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8831 247 358 3.20.20.210
af_K7MME4_84_171_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8445 274 356 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8287 29 356 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A7V5PZ67-F1-model_v4 Methionine synthase 0.974 128 356 GO:0003871
GO:0008270
GO:0009086
AF-A0A3M1G665-F1-model_v4 Methionine synthase 0.9728 265 356 GO:0003871
GO:0008270
GO:0009086
AF-A0A2V9R3L9-F1-model_v4 Methionine synthase 0.9724 156 356 GO:0003871
GO:0008270
GO:0009086
AF-A0A2V9R3L9-F1-model_v4 Methionine synthase 0.963 156 356 GO:0003871
GO:0008270
GO:0009086
AF-A0A258B4A7-F1-model_v4 Methionine synthase 0.9628 28 357 GO:0003871
GO:0008270
GO:0009086

Map