F320956

General Info

Members Datasets Scaffolds Average Seq Length
210 141 420 191

Family's Representative Sequence

Representative Sequence 3300059424|Ga0590075_088870|Ga0590075_088870_35_607
Length 190
Sequence MDDQPFRMVKTMKAQERHELLQALQTRFEKNMHRHKGIAWADVQARLESNHHALKSLHEMEATGGEPDVINHDAGQYTFCDCSAESPSGRRSLCYDHEALASRKEKKPESSAVEMAAAMGVDLLTEDQYRALQKLGEFDSKTSSWIQTPPDVRALGGALFCDRRYGKVFVYHNGAQSYYAARGFRGSLRV

Samples

Sample ID Description Type Environment
1 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
77 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
78 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
79 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
80 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
85 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
86 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
87 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
88 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
89 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
90 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
94 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
100 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
141 2929520902 Variovorax beijingensis 502 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.52
Metatranscriptomes 0
Isolates 0.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.95
Nodule 0
Rhizoplane 11.43
Rhizosphere 85.71
Stem 0
Stem Tuber 0
Unclassified 10

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0590075_088870 3300059424 Bacteria 801
2 Ga0065712_10113318 3300005290 Bacteria 1785
3 Ga0065715_10487604 3300005293 Bacteria 791
4 Ga0070676_10123792 3300005328 Bacteria 1626
5 Ga0070676_10331886 3300005328 Bacteria 1040
6 Ga0070670_100005370 3300005331 Bacteria 10818
7 Ga0070670_100032615 3300005331 Bacteria 4486
8 Ga0070666_10013619 3300005335 Bacteria 5164
9 Ga0070666_10089203 3300005335 Bacteria 2116
10 Ga0068868_100117450 3300005338 Bacteria 2167
11 Ga0070668_100430930 3300005347 Bacteria 1130
12 Ga0070668_100455314 3300005347 Unclassified 1101
13 Ga0070675_100045619 3300005354 Bacteria 3587
14 Ga0070671_100046625 3300005355 Bacteria 3604
15 Ga0070674_100193294 3300005356 Bacteria 1567
16 Ga0070674_100378217 3300005356 Bacteria 1151
17 Ga0070673_100100281 3300005364 Bacteria 2383
18 Ga0070688_100583716 3300005365 Unclassified 853
19 Ga0070667_100022149 3300005367 Bacteria 5272
20 Ga0070667_100025428 3300005367 Bacteria 4922
21 Ga0070667_100240111 3300005367 Bacteria 1618
22 Ga0070710_10693726 3300005437 Bacteria 718
23 Ga0070705_100126053 3300005440 Bacteria 1662
24 Ga0070694_100600694 3300005444 Bacteria 886
25 Ga0070708_100862419 3300005445 Bacteria 851
26 Ga0068867_101323804 3300005459 Bacteria 666
27 Ga0070706_100095026 3300005467 Bacteria 2766
28 Ga0070707_100471650 3300005468 Bacteria 1216
29 Ga0070707_101407684 3300005468 Bacteria 664
30 Ga0070679_100338195 3300005530 Bacteria 1453
31 Ga0070697_100221258 3300005536 Bacteria 1613
32 Ga0070672_100145006 3300005543 Bacteria 1961
33 Ga0070672_100173855 3300005543 Bacteria 1792
34 Ga0070672_100182445 3300005543 Bacteria 1749
35 Ga0070672_100933343 3300005543 Unclassified 767
36 Ga0070665_100022945 3300005548 Bacteria 6284
37 Ga0070665_100103327 3300005548 Bacteria 2853
38 Ga0070665_100344802 3300005548 Bacteria 1494
39 Ga0068855_100135511 3300005563 Bacteria 2810
40 Ga0068855_101129501 3300005563 Bacteria 818
41 Ga0068859_100054266 3300005617 Bacteria 4030
42 Ga0068864_100740531 3300005618 Bacteria 963
43 Ga0068858_100074034 3300005842 Bacteria 3162
44 Ga0068858_100354052 3300005842 Bacteria 1407
45 Ga0068858_100602189 3300005842 Bacteria 1066
46 Ga0068860_101063305 3300005843 Bacteria 828
47 Ga0070712_100192056 3300006175 Bacteria 1598
48 Ga0075362_10087263 3300006177 Bacteria 1444
49 Ga0068871_100218560 3300006358 Bacteria 1650
50 Ga0075430_100118569 3300006846 Bacteria 2206
51 Ga0068865_100181790 3300006881 Bacteria 1620
52 Ga0097620_100054266 3300006931 Bacteria 4030
53 Ga0105240_10272457 3300009093 Bacteria 1948
54 Ga0105240_10854294 3300009093 Bacteria 982
55 Ga0105242_10011161 3300009176 Bacteria 6903
56 Ga0105238_10001338 3300009551 Bacteria 24740
57 Ga0105238_10264362 3300009551 Bacteria 1700
58 Ga0157374_10080842 3300013296 Bacteria 3083
59 Ga0157374_10082356 3300013296 Bacteria 3055
60 Ga0157374_10101671 3300013296 Bacteria 2756
61 Ga0157374_11625301 3300013296 Bacteria 670
62 Ga0157378_10256781 3300013297 Bacteria 1675
63 Ga0157378_10449767 3300013297 Bacteria 1278
64 Ga0157378_10672814 3300013297 Bacteria 1052
65 Ga0163162_10136010 3300013306 Bacteria 2568
66 Ga0163162_10227066 3300013306 Bacteria 1997
67 Ga0163162_10547210 3300013306 Bacteria 1286
68 Ga0157375_10007700 3300013308 Bacteria 9425
69 Ga0157375_10085414 3300013308 Bacteria 3206
70 Ga0157376_10673247 3300014969 Bacteria 1037
71 Ga0163161_10011596 3300017792 Bacteria 6119
72 Ga0213876_10030311 3300021384 Bacteria 2853
73 Ga0207697_10100803 3300025315 Bacteria 1230
74 Ga0207692_10265563 3300025898 Bacteria 1033
75 Ga0207642_10282291 3300025899 Bacteria 956
76 Ga0207680_10026247 3300025903 Bacteria 3227
77 Ga0207680_10505330 3300025903 Unclassified 861
78 Ga0207645_10152497 3300025907 Bacteria 1509
79 Ga0207645_10488027 3300025907 Bacteria 833
80 Ga0207684_10214552 3300025910 Bacteria 1660
81 Ga0207695_10172730 3300025913 Bacteria 2086
82 Ga0207693_10148527 3300025915 Bacteria 1843
83 Ga0207646_10097643 3300025922 Bacteria 2632
84 Ga0207650_10076225 3300025925 Bacteria 2533
85 Ga0207650_10410986 3300025925 Bacteria 1121
86 Ga0207659_10002405 3300025926 Bacteria 11141
87 Ga0207659_10143720 3300025926 Unclassified 1855
88 Ga0207659_10235758 3300025926 Bacteria 1478
89 Ga0207644_10085785 3300025931 Bacteria 2336
90 Ga0207670_10422525 3300025936 Bacteria 1070
91 Ga0207669_10337603 3300025937 Bacteria 1159
92 Ga0207691_10120475 3300025940 Bacteria 2326
93 Ga0207691_10251860 3300025940 Bacteria 1524
94 Ga0207711_10431530 3300025941 Bacteria 1226
95 Ga0207689_10355814 3300025942 Bacteria 1217
96 Ga0207679_10158979 3300025945 Bacteria 1848
97 Ga0207651_10076574 3300025960 Bacteria 2392
98 Ga0207651_10115742 3300025960 Bacteria 2022
99 Ga0207668_10423874 3300025972 Unclassified 1130
100 Ga0207668_10619226 3300025972 Bacteria 944
101 Ga0207640_10194117 3300025981 Bacteria 1533
102 Ga0207658_10016753 3300025986 Bacteria 5043
103 Ga0207658_10140262 3300025986 Bacteria 1955
104 Ga0207677_10050280 3300026023 Bacteria 2819
105 Ga0207703_10071085 3300026035 Bacteria 2874
106 Ga0207703_10429364 3300026035 Bacteria 1231
107 Ga0207639_10767667 3300026041 Bacteria 897
108 Ga0207708_11175583 3300026075 Bacteria 670
109 Ga0207702_11281148 3300026078 Bacteria 727
110 Ga0207641_10212458 3300026088 Bacteria 1790
111 Ga0268266_10007352 3300028379 Bacteria 9950
112 Ga0265337_1000706 3300028556 Bacteria 17597
113 Ga0265337_1009118 3300028556 Bacteria 3561
114 Ga0265337_1009829 3300028556 Unclassified 3389
115 Ga0265334_10010711 3300028573 Bacteria 3869
116 Ga0265323_10058370 3300028653 Bacteria 1348
117 Ga0265322_10081732 3300028654 Bacteria 917
118 Ga0265336_10000399 3300028666 Bacteria 27286
119 Ga0265336_10019523 3300028666 Bacteria 2186
120 Ga0265336_10034246 3300028666 Bacteria 1570
121 Ga0265338_10000108 3300028800 Bacteria 152898
122 Ga0265338_10000546 3300028800 Bacteria 65848
123 Ga0265338_10007792 3300028800 Bacteria 13171
124 Ga0265338_10036304 3300028800 Bacteria 4719
125 Ga0265338_10046630 3300028800 Unclassified 3969
126 Ga0265338_10082763 3300028800 Bacteria 2686
127 Ga0265338_10093065 3300028800 Unclassified 2485
128 Ga0265324_10015521 3300029957 Unclassified 2800
129 Ga0265324_10047991 3300029957 Bacteria 1469
130 Ga0265320_10000999 3300031240 Bacteria 21006
131 Ga0265320_10001109 3300031240 Bacteria 19864
132 Ga0265320_10039742 3300031240 Unclassified 2350
133 Ga0265339_10186347 3300031249 Bacteria 1031
134 Ga0265331_10160711 3300031250 Bacteria 1018
135 Ga0265327_10060578 3300031251 Bacteria 1934
136 Ga0265327_10082288 3300031251 Bacteria 1587
137 Ga0307508_10109815 3300031616 Bacteria 2357
138 Ga0373924_0263661 3300035410 Bacteria 764
139 Ga0373931_0076457 3300035691 Bacteria 1839
140 Ga0373931_0273250 3300035691 Bacteria 1035
141 Ga0373935_0133059 3300035692 Bacteria 1673
142 Ga0373937_0706070 3300036401 Bacteria 955
143 Ga0436365_0948976 3300039437 Bacteria 2731
144 Ga0451577_0500886 3300042876 Bacteria 1103
145 Ga0495592_0000485 3300046454 Bacteria 28950
146 Ga0495592_0062415 3300046454 Bacteria 2736
147 Ga0495651_0052218 3300046462 Unclassified 3149
148 Ga0495653_0212992 3300046463 Bacteria 1304
149 Ga0495662_0048961 3300046476 Bacteria 2040
150 Ga0495664_0067424 3300046477 Bacteria 2135
151 Ga0495618_0007012 3300046514 Bacteria 6828
152 Ga0495628_0313317 3300046516 Bacteria 1159
153 Ga0495630_0144215 3300046517 Bacteria 1811
154 Ga0495666_0324109 3300046526 Bacteria 695
155 Ga0495586_0008168 3300046535 Bacteria 5577
156 Ga0495586_0249258 3300046535 Bacteria 1013
157 Ga0495587_0275200 3300046536 Unclassified 944
158 Ga0495598_0189423 3300046537 Bacteria 738
159 Ga0495645_0096407 3300046543 Bacteria 2108
160 Ga0495634_0151019 3300046642 Bacteria 1469
161 Ga0495634_0153635 3300046642 Bacteria 1454
162 Ga0495599_0026640 3300046678 Bacteria 3624
163 Ga0495599_0171529 3300046678 Bacteria 1338
164 Ga0495624_0446487 3300046690 Bacteria 775
165 Ga0495674_0106263 3300047319 Bacteria 2384
166 Ga0495684_0025765 3300047471 Bacteria 4519
167 Ga0496100_0001181 3300048903 Bacteria 12715
168 Ga0496101_0001557 3300048904 Bacteria 13753
169 Ga0496101_0429718 3300048904 Unclassified 1041
170 Ga0496102_0119321 3300048905 Bacteria 2462
171 Ga0496104_0001324 3300048907 Bacteria 21371
172 Ga0496104_0653756 3300048907 Unclassified 960
173 Ga0496105_0012089 3300048908 Bacteria 6835
174 Ga0496105_0183688 3300048908 Bacteria 1712
175 Ga0496106_0024072 3300048909 Bacteria 4526
176 Ga0496106_0438029 3300048909 Unclassified 1050
177 Ga0496107_0156572 3300048910 Unclassified 1687
178 Ga0496108_0232252 3300048911 Bacteria 1604
179 Ga0496108_0616818 3300048911 Unclassified 945
180 Ga0496108_0928891 3300048911 Bacteria 746
181 Ga0496109_0209274 3300048912 Bacteria 1834
182 Ga0496109_0728373 3300048912 Bacteria 929
183 Ga0496110_0007582 3300048913 Bacteria 8670
184 Ga0496111_0012992 3300048914 Bacteria 5652
185 Ga0496111_0170824 3300048914 Bacteria 1616
186 Ga0496112_0020262 3300048915 Bacteria 6300
187 Ga0496112_0337799 3300048915 Bacteria 1450
188 Ga0496114_0050249 3300048917 Bacteria 3471
189 Ga0496114_0063807 3300048917 Bacteria 3084
190 Ga0496115_0011382 3300048918 Bacteria 6667
191 Ga0501031_0010632 3300049568 Bacteria 5993
192 Ga0501032_0439774 3300049569 Bacteria 836
193 Ga0501033_0511289 3300049570 Unclassified 830
194 Ga0501036_0278871 3300049572 Unclassified 1399
195 Ga0501039_0009180 3300049575 Bacteria 7535
196 Ga0501039_0290517 3300049575 Bacteria 1285
197 Ga0501042_0664137 3300049578 Unclassified 758
198 Ga0501043_0035342 3300049579 Bacteria 3930
199 Ga0501047_0023723 3300049581 Bacteria 5889
200 Ga0501070_0012405 3300049586 Bacteria 7188
201 Ga0501070_0659120 3300049586 Bacteria 830
202 Ga0501083_0011061 3300049744 Bacteria 6340
203 Ga0501035_0011798 3300049822 Bacteria 8090
204 Ga0501035_0013397 3300049822 Bacteria 7568
205 Ga0501044_0006678 3300049823 Bacteria 12721
206 Ga0501044_0012919 3300049823 Bacteria 9038
207 nmdc:mga06r32_358573_c2 3300050510 Bacteria 995
208 Ga0495601_0684059 3300053077 Bacteria 655
209 Ga0500650_0086860 3300053098 Bacteria 1464
210 2929523945 2929520902 Bacteria 6765052
211 Ga0590075_088870
212 Ga0065712_10113318
213 Ga0065715_10487604
214 Ga0070676_10123792
215 Ga0070676_10331886
216 Ga0070670_100005370
217 Ga0070670_100032615
218 Ga0070666_10013619
219 Ga0070666_10089203
220 Ga0068868_100117450
221 Ga0070668_100430930
222 Ga0070668_100455314
223 Ga0070675_100045619
224 Ga0070671_100046625
225 Ga0070674_100193294
226 Ga0070674_100378217
227 Ga0070673_100100281
228 Ga0070688_100583716
229 Ga0070667_100022149
230 Ga0070667_100025428
231 Ga0070667_100240111
232 Ga0070710_10693726
233 Ga0070705_100126053
234 Ga0070694_100600694
235 Ga0070708_100862419
236 Ga0068867_101323804
237 Ga0070706_100095026
238 Ga0070707_100471650
239 Ga0070707_101407684
240 Ga0070679_100338195
241 Ga0070697_100221258
242 Ga0070672_100145006
243 Ga0070672_100173855
244 Ga0070672_100182445
245 Ga0070672_100933343
246 Ga0070665_100022945
247 Ga0070665_100103327
248 Ga0070665_100344802
249 Ga0068855_100135511
250 Ga0068855_101129501
251 Ga0068859_100054266
252 Ga0068864_100740531
253 Ga0068858_100074034
254 Ga0068858_100354052
255 Ga0068858_100602189
256 Ga0068860_101063305
257 Ga0070712_100192056
258 Ga0075362_10087263
259 Ga0068871_100218560
260 Ga0075430_100118569
261 Ga0068865_100181790
262 Ga0097620_100054266
263 Ga0105240_10272457
264 Ga0105240_10854294
265 Ga0105242_10011161
266 Ga0105238_10001338
267 Ga0105238_10264362
268 Ga0157374_10080842
269 Ga0157374_10082356
270 Ga0157374_10101671
271 Ga0157374_11625301
272 Ga0157378_10256781
273 Ga0157378_10449767
274 Ga0157378_10672814
275 Ga0163162_10136010
276 Ga0163162_10227066
277 Ga0163162_10547210
278 Ga0157375_10007700
279 Ga0157375_10085414
280 Ga0157376_10673247
281 Ga0163161_10011596
282 Ga0213876_10030311
283 Ga0207697_10100803
284 Ga0207692_10265563
285 Ga0207642_10282291
286 Ga0207680_10026247
287 Ga0207680_10505330
288 Ga0207645_10152497
289 Ga0207645_10488027
290 Ga0207684_10214552
291 Ga0207695_10172730
292 Ga0207693_10148527
293 Ga0207646_10097643
294 Ga0207650_10076225
295 Ga0207650_10410986
296 Ga0207659_10002405
297 Ga0207659_10143720
298 Ga0207659_10235758
299 Ga0207644_10085785
300 Ga0207670_10422525
301 Ga0207669_10337603
302 Ga0207691_10120475
303 Ga0207691_10251860
304 Ga0207711_10431530
305 Ga0207689_10355814
306 Ga0207679_10158979
307 Ga0207651_10076574
308 Ga0207651_10115742
309 Ga0207668_10423874
310 Ga0207668_10619226
311 Ga0207640_10194117
312 Ga0207658_10016753
313 Ga0207658_10140262
314 Ga0207677_10050280
315 Ga0207703_10071085
316 Ga0207703_10429364
317 Ga0207639_10767667
318 Ga0207708_11175583
319 Ga0207702_11281148
320 Ga0207641_10212458
321 Ga0268266_10007352
322 Ga0265337_1000706
323 Ga0265337_1009118
324 Ga0265337_1009829
325 Ga0265334_10010711
326 Ga0265323_10058370
327 Ga0265322_10081732
328 Ga0265336_10000399
329 Ga0265336_10019523
330 Ga0265336_10034246
331 Ga0265338_10000108
332 Ga0265338_10000546
333 Ga0265338_10007792
334 Ga0265338_10036304
335 Ga0265338_10046630
336 Ga0265338_10082763
337 Ga0265338_10093065
338 Ga0265324_10015521
339 Ga0265324_10047991
340 Ga0265320_10000999
341 Ga0265320_10001109
342 Ga0265320_10039742
343 Ga0265339_10186347
344 Ga0265331_10160711
345 Ga0265327_10060578
346 Ga0265327_10082288
347 Ga0307508_10109815
348 Ga0373924_0263661
349 Ga0373931_0076457
350 Ga0373931_0273250
351 Ga0373935_0133059
352 Ga0373937_0706070
353 Ga0436365_0948976
354 Ga0451577_0500886
355 Ga0495592_0000485
356 Ga0495592_0062415
357 Ga0495651_0052218
358 Ga0495653_0212992
359 Ga0495662_0048961
360 Ga0495664_0067424
361 Ga0495618_0007012
362 Ga0495628_0313317
363 Ga0495630_0144215
364 Ga0495666_0324109
365 Ga0495586_0008168
366 Ga0495586_0249258
367 Ga0495587_0275200
368 Ga0495598_0189423
369 Ga0495645_0096407
370 Ga0495634_0151019
371 Ga0495634_0153635
372 Ga0495599_0026640
373 Ga0495599_0171529
374 Ga0495624_0446487
375 Ga0495674_0106263
376 Ga0495684_0025765
377 Ga0496100_0001181
378 Ga0496101_0001557
379 Ga0496101_0429718
380 Ga0496102_0119321
381 Ga0496104_0001324
382 Ga0496104_0653756
383 Ga0496105_0012089
384 Ga0496105_0183688
385 Ga0496106_0024072
386 Ga0496106_0438029
387 Ga0496107_0156572
388 Ga0496108_0232252
389 Ga0496108_0616818
390 Ga0496108_0928891
391 Ga0496109_0209274
392 Ga0496109_0728373
393 Ga0496110_0007582
394 Ga0496111_0012992
395 Ga0496111_0170824
396 Ga0496112_0020262
397 Ga0496112_0337799
398 Ga0496114_0050249
399 Ga0496114_0063807
400 Ga0496115_0011382
401 Ga0501031_0010632
402 Ga0501032_0439774
403 Ga0501033_0511289
404 Ga0501036_0278871
405 Ga0501039_0009180
406 Ga0501039_0290517
407 Ga0501042_0664137
408 Ga0501043_0035342
409 Ga0501047_0023723
410 Ga0501070_0012405
411 Ga0501070_0659120
412 Ga0501083_0011061
413 Ga0501035_0011798
414 Ga0501035_0013397
415 Ga0501044_0006678
416 Ga0501044_0012919
417 nmdc:mga06r32_358573_c2
418 Ga0495601_0684059
419 Ga0500650_0086860
420 2929523945

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14066

DUF4256

Protein of unknown function (DUF4256)

20

190

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2y8r-assembly3.cif.gz_D crystal structure of apo ama1 mutant (tyr230ala) from toxoplasma gondii 0.72 144 175
8oks-assembly1.cif.gz_A crystal structure of bdellovibrio bacteriovorus bd2740 c-terminal domain 0.702 66 189
7sa7-assembly4.cif.gz_D crystal structure of the apo sh2 domains of syk 0.6944 124 175
6xe0-assembly1.cif.gz_V cryo-em structure of nusg-ctd bound to 70s ribosome (30s: nusg-ctd fragment) 0.6636 144 176
3whd-assembly3.cif.gz_C c-type lectin, human mcl 0.663 113 191
ID Description Score Start End Superfamily
af_C0HF20_381_483_3.20.180.10 Alpha Beta;Alpha-Beta Barrel;Split barrel-like;PNP-oxidase-like 0.7267 141 175 3.20.180.10
4yizC03 Mainly Beta;Ribbon;Complement Module; domain 1; 0.6989 144 175 2.10.70.70
2x2zA03 Mainly Beta;Ribbon;Complement Module; domain 1; 0.6988 144 175 2.10.70.70
af_Q94AA3_277_328_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.6776 146 175 2.30.30.30
af_A0A0K3AS36_963_1030_2.30.30.40 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.6718 144 176 2.30.30.40
ID Description Score Start End GO Terms
AF-A0A3D0P067-F1-model_v4 DUF4256 domain-containing protein 0.9794 10 191
AF-A0A0J7J108-F1-model_v4 DUF4256 domain-containing protein 0.9793 16 191
AF-A0A432K9I1-F1-model_v4 DUF4256 domain-containing protein 0.978 23 191
AF-A0A4Q3VWS0-F1-model_v4 DUF4256 domain-containing protein 0.978 10 180
AF-M4X0F9-F1-model_v4 Uncharacterized protein 0.9774 11 191

Map