F320790

General Info

Members Datasets Scaffolds Average Seq Length
210 133 418 352

Family's Representative Sequence

Representative Sequence 3300046689|Ga0495613_0132838|Ga0495613_0132838_223_1377
Length 377
Sequence VLLCVKPGGTVIGLFNVFKIRIMKSRKILFISAIILTGGALHAQDSTEKKGNLTISGSADTYYRFNFHNAKDSGYTNNYTSFELGMASIKADYSVGKVDGVVDLGFGRRAEEFSYNDGDLDQNKNGFTSLTAIKQAYISYAPSAKVKFTMGKWFTHVGYEVPDAYLNRNYSMDYMFSYGPFFHTGLKMDVTLNGNFGFMIGVANPTDFSSASFAKKNFIGQVHLATTNSKVNAYINYVGGKDMSDATVNQFDLVATGTISGKFSVGYNGSVKIVEPNGGSSDSWWGSAIYLNYDPSTAFGLTARGEYFGDDKGVAGFGTNIFDVTLSGNIHISNLTIIPEFRLDASQDPLFFKENDPSNAPSAKSTGTFILAATYHF

Samples

Sample ID Description Type Environment
1 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
83 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
84 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
85 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
88 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
94 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
95 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
96 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
121 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
127 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
128 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
129 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
130 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
131 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
132 3300059507 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 98R_CW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
133 2738541278 Niastella sp. CF465 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.1
Metatranscriptomes 1.43
Isolates 0.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.76
Nodule 0
Rhizoplane 0.48
Rhizosphere 88.57
Stem 0
Stem Tuber 0
Unclassified 4.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495613_0132838 3300046689 Bacteria 1782
2 rootL2_10087199 3300003322 Bacteria 2003
3 rootH1_10005865 3300003323 Bacteria 31302
4 rootH1_10297400 3300003323 Bacteria 2688
5 Ga0070683_100003287 3300005329 Bacteria 13069
6 Ga0070690_100217189 3300005330 Bacteria 1338
7 Ga0068869_100005769 3300005334 Bacteria 7809
8 Ga0068869_100099320 3300005334 Bacteria 2200
9 Ga0070666_10031235 3300005335 Bacteria 3515
10 Ga0068868_100001864 3300005338 Bacteria 14474
11 Ga0068868_100052804 3300005338 Bacteria 3200
12 Ga0068868_100075869 3300005338 Bacteria 2687
13 Ga0070689_100008756 3300005340 Bacteria 7142
14 Ga0070689_100141807 3300005340 Bacteria 1933
15 Ga0070661_100025076 3300005344 Bacteria 4282
16 Ga0070661_100296168 3300005344 Bacteria 1258
17 Ga0070669_100036499 3300005353 Bacteria 3562
18 Ga0070669_100292216 3300005353 Bacteria 1309
19 Ga0070675_100049806 3300005354 Bacteria 3439
20 Ga0070675_100077606 3300005354 Bacteria 2765
21 Ga0070688_100003733 3300005365 Bacteria 7882
22 Ga0070678_100053339 3300005456 Bacteria 2940
23 Ga0070662_100005964 3300005457 Bacteria 7814
24 Ga0070662_100065013 3300005457 Bacteria 2673
25 Ga0070662_100150512 3300005457 Bacteria 1811
26 Ga0068867_100177600 3300005459 Bacteria 1691
27 Ga0070685_10015282 3300005466 Bacteria 4077
28 Ga0070685_10071847 3300005466 Bacteria 2052
29 Ga0070698_100001781 3300005471 Bacteria 23961
30 Ga0070698_100060608 3300005471 Bacteria 3819
31 Ga0070684_100053002 3300005535 Bacteria 3529
32 Ga0070684_100071075 3300005535 Bacteria 3063
33 Ga0070684_100325161 3300005535 Bacteria 1413
34 Ga0068853_100021963 3300005539 Bacteria 5323
35 Ga0068853_100108030 3300005539 Bacteria 2468
36 Ga0070665_100150906 3300005548 Bacteria 2327
37 Ga0068855_100006317 3300005563 Bacteria 14441
38 Ga0070664_100000670 3300005564 Bacteria 26132
39 Ga0070664_100118836 3300005564 Bacteria 2313
40 Ga0070664_100155118 3300005564 Bacteria 2023
41 Ga0068857_100010453 3300005577 Bacteria 8067
42 Ga0068857_100034067 3300005577 Bacteria 4506
43 Ga0068857_100138699 3300005577 Bacteria 2197
44 Ga0070702_100049865 3300005615 Bacteria 2389
45 Ga0068852_100070778 3300005616 Bacteria 3061
46 Ga0068859_100005857 3300005617 Bacteria 12472
47 Ga0068859_100010069 3300005617 Bacteria 9532
48 Ga0068859_100089553 3300005617 Bacteria 3127
49 Ga0068859_100294492 3300005617 Bacteria 1716
50 Ga0068859_100407517 3300005617 Unclassified 1455
51 Ga0068864_100000994 3300005618 Bacteria 23711
52 Ga0068864_100023216 3300005618 Bacteria 5206
53 Ga0068864_100068989 3300005618 Bacteria 3073
54 Ga0068864_100239684 3300005618 Unclassified 1680
55 Ga0068861_100055264 3300005719 Bacteria 3027
56 Ga0068863_100030778 3300005841 Bacteria 5125
57 Ga0068863_100042343 3300005841 Bacteria 4326
58 Ga0068858_100178641 3300005842 Bacteria 2004
59 Ga0068860_100184198 3300005843 Bacteria 2019
60 Ga0081539_10018735 3300005985 Bacteria 4783
61 Ga0075366_10007313 3300006195 Bacteria 6091
62 Ga0097621_100053188 3300006237 Bacteria 3300
63 Ga0097621_100071913 3300006237 Bacteria 2860
64 Ga0097621_100463899 3300006237 Unclassified 1143
65 Ga0097620_100003858 3300006931 Bacteria 15315
66 Ga0097620_100005856 3300006931 Bacteria 12472
67 Ga0097620_100010070 3300006931 Bacteria 9532
68 Ga0097620_100089553 3300006931 Bacteria 3127
69 Ga0097620_100294433 3300006931 Bacteria 1716
70 Ga0097620_100407502 3300006931 Unclassified 1455
71 Ga0105240_10131286 3300009093 Bacteria 3004
72 Ga0105247_10026278 3300009101 Bacteria 3514
73 Ga0114129_10021373 3300009147 Bacteria 9186
74 Ga0105242_10006263 3300009176 Bacteria 9163
75 Ga0105242_10006441 3300009176 Bacteria 9041
76 Ga0105242_10054798 3300009176 Bacteria 3260
77 Ga0105237_10015063 3300009545 Bacteria 8058
78 Ga0105249_10006983 3300009553 Bacteria 9848
79 Ga0105249_10035072 3300009553 Bacteria 4547
80 Ga0105239_10004669 3300010375 Bacteria 16284
81 Ga0105239_10409166 3300010375 Bacteria 1536
82 Ga0157371_10096063 3300013102 Bacteria 2100
83 Ga0157374_10000966 3300013296 Bacteria 24956
84 Ga0157378_10067946 3300013297 Bacteria 3195
85 Ga0157378_10328878 3300013297 Unclassified 1487
86 Ga0163162_10000805 3300013306 Bacteria 29123
87 Ga0163162_10008925 3300013306 Bacteria 9749
88 Ga0163162_10021455 3300013306 Bacteria 6362
89 Ga0163162_10043718 3300013306 Bacteria 4486
90 Ga0163162_10092003 3300013306 Bacteria 3116
91 Ga0157372_10183408 3300013307 Bacteria 2423
92 Ga0157375_10002825 3300013308 Bacteria 15030
93 Ga0157375_10145558 3300013308 Bacteria 2500
94 Ga0163163_10000836 3300014325 Bacteria 26189
95 Ga0163163_10007812 3300014325 Bacteria 9455
96 Ga0163163_10081523 3300014325 Bacteria 3237
97 Ga0157377_10009536 3300014745 Bacteria 4768
98 Ga0157379_10008113 3300014968 Bacteria 9119
99 Ga0157379_10011583 3300014968 Bacteria 7700
100 Ga0157379_10173021 3300014968 Bacteria 1949
101 Ga0157376_10002958 3300014969 Bacteria 11661
102 Ga0157376_10024429 3300014969 Bacteria 4744
103 Ga0163161_10123066 3300017792 Bacteria 1951
104 Ga0209646_1000812 3300025246 Bacteria 10588
105 Ga0207671_10114606 3300025914 Bacteria 2054
106 Ga0207662_10104529 3300025918 Bacteria 1759
107 Ga0207649_10006046 3300025920 Bacteria 6569
108 Ga0207681_10287575 3300025923 Bacteria 1296
109 Ga0207650_10000812 3300025925 Bacteria 24035
110 Ga0207659_10045185 3300025926 Bacteria 3103
111 Ga0207706_10010072 3300025933 Bacteria 8657
112 Ga0207706_10043432 3300025933 Bacteria 3983
113 Ga0207706_10220582 3300025933 Bacteria 1660
114 Ga0207686_10000379 3300025934 Bacteria 30995
115 Ga0207670_10001548 3300025936 Bacteria 12099
116 Ga0207704_10025101 3300025938 Bacteria 3247
117 Ga0207691_10123567 3300025940 Unclassified 2291
118 Ga0207689_10006901 3300025942 Bacteria 9988
119 Ga0207689_10047820 3300025942 Bacteria 3529
120 Ga0207689_10207488 3300025942 Bacteria 1618
121 Ga0207689_10305580 3300025942 Unclassified 1319
122 Ga0207661_10150443 3300025944 Unclassified 2012
123 Ga0207679_10001765 3300025945 Bacteria 13459
124 Ga0207679_10177417 3300025945 Bacteria 1759
125 Ga0207667_10004916 3300025949 Bacteria 16320
126 Ga0207712_10005601 3300025961 Bacteria 7919
127 Ga0207712_10055442 3300025961 Bacteria 2788
128 Ga0207677_10053408 3300026023 Bacteria 2750
129 Ga0207703_10242224 3300026035 Bacteria 1622
130 Ga0207639_10057446 3300026041 Bacteria 2988
131 Ga0207702_10010336 3300026078 Bacteria 7817
132 Ga0207641_10149418 3300026088 Bacteria 2115
133 Ga0207641_10217400 3300026088 Unclassified 1770
134 Ga0207648_10021542 3300026089 Bacteria 5792
135 Ga0207676_10007352 3300026095 Bacteria 7812
136 Ga0207676_10012459 3300026095 Bacteria 6094
137 Ga0207676_10057359 3300026095 Bacteria 3066
138 Ga0207676_10244360 3300026095 Unclassified 1612
139 Ga0207674_10003642 3300026116 Bacteria 18794
140 Ga0207675_100009985 3300026118 Bacteria 8890
141 Ga0207683_10015229 3300026121 Bacteria 6545
142 Ga0307515_10000001 3300028794 Bacteria 4259510
143 Ga0265327_10000013 3300031251 Bacteria 519549
144 Ga0307513_10052929 3300031456 Bacteria 4367
145 Ga0307513_10068147 3300031456 Bacteria 3729
146 Ga0307513_10224384 3300031456 Bacteria 1697
147 Ga0307509_10006169 3300031507 Bacteria 16246
148 Ga0307509_10030532 3300031507 Bacteria 5959
149 Ga0307508_10001202 3300031616 Bacteria 29714
150 Ga0373956_0017844 3300035119 Bacteria 2999
151 Ga0373955_0004781 3300035172 Bacteria 6030
152 Ga0373935_0189316 3300035692 Bacteria 1417
153 Ga0373927_0168275 3300035695 Bacteria 1436
154 Ga0373933_0050672 3300035724 Bacteria 2479
155 Ga0373937_0021327 3300036401 Bacteria 5815
156 Ga0439439_0043630 3300041406 Bacteria 1167
157 Ga0439457_004364 3300042014 Bacteria 3693
158 Ga0466969_0000132 3300044656 Bacteria 40569
159 Ga0466972_0000095 3300044658 Bacteria 77981
160 Ga0466972_0016726 3300044658 Bacteria 3667
161 Ga0466957_0000423 3300044842 Bacteria 20805
162 Ga0466957_0008431 3300044842 Bacteria 5863
163 Ga0466959_0003474 3300045049 Bacteria 10316
164 Ga0466959_0075000 3300045049 Bacteria 2445
165 Ga0495592_0107532 3300046454 Bacteria 1978
166 Ga0495608_0069799 3300046511 Bacteria 2294
167 Ga0495628_0005895 3300046516 Bacteria 10724
168 Ga0495657_0128831 3300046675 Bacteria 1587
169 Ga0495599_0178723 3300046678 Bacteria 1308
170 Ga0495646_0030887 3300046680 Bacteria 3342
171 Ga0495604_0012621 3300047317 Bacteria 6722
172 Ga0495674_0057518 3300047319 Bacteria 3403
173 Ga0495686_0020148 3300047472 Bacteria 4450
174 Ga0496104_0321650 3300048907 Bacteria 1460
175 Ga0501306_007634 3300049127 Bacteria 1299
176 Ga0501312_009181 3300049528 Bacteria 1299
177 Ga0501031_0011783 3300049568 Bacteria 5704
178 Ga0501031_0022048 3300049568 Bacteria 4150
179 Ga0501032_0224615 3300049569 Bacteria 1222
180 Ga0501034_0011222 3300049571 Bacteria 9304
181 Ga0501034_0060959 3300049571 Bacteria 3789
182 Ga0501037_0111238 3300049573 Bacteria 1973
183 Ga0501038_0005513 3300049574 Bacteria 11752
184 Ga0501038_0075113 3300049574 Bacteria 2857
185 Ga0501039_0025852 3300049575 Bacteria 4513
186 Ga0501043_0125005 3300049579 Bacteria 2017
187 Ga0501043_0305116 3300049579 Bacteria 1216
188 Ga0501043_0394983 3300049579 Bacteria 1045
189 Ga0501046_0219271 3300049580 Bacteria 1409
190 Ga0501047_0074789 3300049581 Bacteria 3261
191 Ga0501225_0002999 3300049705 Bacteria 5155
192 Ga0501035_0044900 3300049822 Bacteria 3977
193 Ga0501035_0256096 3300049822 Bacteria 1485
194 Ga0501044_0014631 3300049823 Bacteria 8460
195 Ga0501044_0068357 3300049823 Bacteria 3619
196 Ga0501044_0167856 3300049823 Bacteria 2168
197 nmdc:mga0k408_3361_c1 3300050493 Bacteria 8474
198 nmdc:mga0k408_36382_c1 3300050493 Bacteria 2825
199 nmdc:mga05p37_2972_c2 3300050507 Bacteria 16562
200 Ga0495619_0074494 3300053085 Bacteria 2277
201 Ga0500578_0001498 3300053086 Bacteria 23150
202 Ga0500583_0000010 3300053092 Bacteria 160546
203 Ga0500652_006518 3300053131 Bacteria 3763
204 Ga0500589_003665 3300053147 Bacteria 5594
205 Ga0500616_0038163 3300053153 Bacteria 2596
206 Ga0500622_0039785 3300053156 Bacteria 2451
207 Ga0500622_0055041 3300053156 Bacteria 2039
208 Ga0587086_004847 3300059507 Bacteria 1427
209 2738729007 2738541278 Bacteria 9755573
210 Ga0495613_0132838
211 rootL2_10087199
212 rootH1_10005865
213 rootH1_10297400
214 Ga0070683_100003287
215 Ga0070690_100217189
216 Ga0068869_100005769
217 Ga0068869_100099320
218 Ga0070666_10031235
219 Ga0068868_100001864
220 Ga0068868_100052804
221 Ga0068868_100075869
222 Ga0070689_100008756
223 Ga0070689_100141807
224 Ga0070661_100025076
225 Ga0070661_100296168
226 Ga0070669_100036499
227 Ga0070669_100292216
228 Ga0070675_100049806
229 Ga0070675_100077606
230 Ga0070688_100003733
231 Ga0070678_100053339
232 Ga0070662_100005964
233 Ga0070662_100065013
234 Ga0070662_100150512
235 Ga0068867_100177600
236 Ga0070685_10015282
237 Ga0070685_10071847
238 Ga0070698_100001781
239 Ga0070698_100060608
240 Ga0070684_100053002
241 Ga0070684_100071075
242 Ga0070684_100325161
243 Ga0068853_100021963
244 Ga0068853_100108030
245 Ga0070665_100150906
246 Ga0068855_100006317
247 Ga0070664_100000670
248 Ga0070664_100118836
249 Ga0070664_100155118
250 Ga0068857_100010453
251 Ga0068857_100034067
252 Ga0068857_100138699
253 Ga0070702_100049865
254 Ga0068852_100070778
255 Ga0068859_100005857
256 Ga0068859_100010069
257 Ga0068859_100089553
258 Ga0068859_100294492
259 Ga0068859_100407517
260 Ga0068864_100000994
261 Ga0068864_100023216
262 Ga0068864_100068989
263 Ga0068864_100239684
264 Ga0068861_100055264
265 Ga0068863_100030778
266 Ga0068863_100042343
267 Ga0068858_100178641
268 Ga0068860_100184198
269 Ga0081539_10018735
270 Ga0075366_10007313
271 Ga0097621_100053188
272 Ga0097621_100071913
273 Ga0097621_100463899
274 Ga0097620_100003858
275 Ga0097620_100005856
276 Ga0097620_100010070
277 Ga0097620_100089553
278 Ga0097620_100294433
279 Ga0097620_100407502
280 Ga0105240_10131286
281 Ga0105247_10026278
282 Ga0114129_10021373
283 Ga0105242_10006263
284 Ga0105242_10006441
285 Ga0105242_10054798
286 Ga0105237_10015063
287 Ga0105249_10006983
288 Ga0105249_10035072
289 Ga0105239_10004669
290 Ga0105239_10409166
291 Ga0157371_10096063
292 Ga0157374_10000966
293 Ga0157378_10067946
294 Ga0157378_10328878
295 Ga0163162_10000805
296 Ga0163162_10008925
297 Ga0163162_10021455
298 Ga0163162_10043718
299 Ga0163162_10092003
300 Ga0157372_10183408
301 Ga0157375_10002825
302 Ga0157375_10145558
303 Ga0163163_10000836
304 Ga0163163_10007812
305 Ga0163163_10081523
306 Ga0157377_10009536
307 Ga0157379_10008113
308 Ga0157379_10011583
309 Ga0157379_10173021
310 Ga0157376_10002958
311 Ga0157376_10024429
312 Ga0163161_10123066
313 Ga0209646_1000812
314 Ga0207671_10114606
315 Ga0207662_10104529
316 Ga0207649_10006046
317 Ga0207681_10287575
318 Ga0207650_10000812
319 Ga0207659_10045185
320 Ga0207706_10010072
321 Ga0207706_10043432
322 Ga0207706_10220582
323 Ga0207686_10000379
324 Ga0207670_10001548
325 Ga0207704_10025101
326 Ga0207691_10123567
327 Ga0207689_10006901
328 Ga0207689_10047820
329 Ga0207689_10207488
330 Ga0207689_10305580
331 Ga0207661_10150443
332 Ga0207679_10001765
333 Ga0207679_10177417
334 Ga0207667_10004916
335 Ga0207712_10005601
336 Ga0207712_10055442
337 Ga0207677_10053408
338 Ga0207703_10242224
339 Ga0207639_10057446
340 Ga0207702_10010336
341 Ga0207641_10149418
342 Ga0207641_10217400
343 Ga0207648_10021542
344 Ga0207676_10007352
345 Ga0207676_10012459
346 Ga0207676_10057359
347 Ga0207676_10244360
348 Ga0207674_10003642
349 Ga0207675_100009985
350 Ga0207683_10015229
351 Ga0307515_10000001
352 Ga0265327_10000013
353 Ga0307513_10052929
354 Ga0307513_10068147
355 Ga0307513_10224384
356 Ga0307509_10006169
357 Ga0307509_10030532
358 Ga0307508_10001202
359 Ga0373956_0017844
360 Ga0373955_0004781
361 Ga0373935_0189316
362 Ga0373927_0168275
363 Ga0373933_0050672
364 Ga0373937_0021327
365 Ga0439439_0043630
366 Ga0439457_004364
367 Ga0466969_0000132
368 Ga0466972_0000095
369 Ga0466972_0016726
370 Ga0466957_0000423
371 Ga0466957_0008431
372 Ga0466959_0003474
373 Ga0466959_0075000
374 Ga0495592_0107532
375 Ga0495608_0069799
376 Ga0495628_0005895
377 Ga0495657_0128831
378 Ga0495599_0178723
379 Ga0495646_0030887
380 Ga0495604_0012621
381 Ga0495674_0057518
382 Ga0495686_0020148
383 Ga0496104_0321650
384 Ga0501306_007634
385 Ga0501312_009181
386 Ga0501031_0011783
387 Ga0501031_0022048
388 Ga0501032_0224615
389 Ga0501034_0011222
390 Ga0501034_0060959
391 Ga0501037_0111238
392 Ga0501038_0005513
393 Ga0501038_0075113
394 Ga0501039_0025852
395 Ga0501043_0125005
396 Ga0501043_0305116
397 Ga0501043_0394983
398 Ga0501046_0219271
399 Ga0501047_0074789
400 Ga0501225_0002999
401 Ga0501035_0044900
402 Ga0501035_0256096
403 Ga0501044_0014631
404 Ga0501044_0068357
405 Ga0501044_0167856
406 nmdc:mga0k408_3361_c1
407 nmdc:mga0k408_36382_c1
408 nmdc:mga05p37_2972_c2
409 Ga0495619_0074494
410 Ga0500578_0001498
411 Ga0500583_0000010
412 Ga0500652_006518
413 Ga0500589_003665
414 Ga0500616_0038163
415 Ga0500622_0039785
416 Ga0500622_0055041
417 Ga0587086_004847
418 2738729007

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07642

BBP2

Putative beta-barrel porin-2, OmpL-like. bbp2

52

377

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ehe-assembly1.cif.gz_A omptdeltal8 (loop l8 deletion mutant of ompt), an outer membrane protein of vibrio cholerae 0.7288 30 356
6ehe-assembly1.cif.gz_A omptdeltal8 (loop l8 deletion mutant of ompt), an outer membrane protein of vibrio cholerae 0.718 30 356
3wi4-assembly1.cif.gz_A crystal structure of wild-type porb from neisseria meningitidis serogroup b 0.716 30 356
3wi4-assembly1.cif.gz_A crystal structure of wild-type porb from neisseria meningitidis serogroup b 0.7118 30 356
2o4v-assembly1.cif.gz_B an arginine ladder in oprp mediates phosphate specific transfer across the outer membrane 0.7024 30 356
ID Description Score Start End Superfamily
af_Q9M2W6_94_225_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.7331 160 283 2.40.160.10
2o4vB00 Mainly Beta;Beta Barrel;Porin;Porin 0.7024 30 356 2.40.160.10
1e54A00 Mainly Beta;Beta Barrel;Porin;Porin 0.6895 28 356 2.40.160.10
1e54A00 Mainly Beta;Beta Barrel;Porin;Porin 0.6848 28 356 2.40.160.10
af_B4FMR7_110_385_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.684 39 327 2.40.160.10
ID Description Score Start End GO Terms
AF-T0ZAV2-F1-model_v4 TonB-dependent receptor 0.9175 160 288
AF-A0A521EHL8-F1-model_v4 Beta-barrel porin-2, OmpL-like. bbp2 0.9069 21 356
AF-A0A4Q3PDU2-F1-model_v4 deleted 0.9007 30 356
AF-A0A519XYT0-F1-model_v4 Porin 0.8999 160 356
AF-A0A3E1NI37-F1-model_v4 Porin 0.8882 17 356

Map