F320553

General Info

Members Datasets Scaffolds Average Seq Length
210 148 420 172

Family's Representative Sequence

Representative Sequence 3300031903|Ga0307407_10635427|Ga0307407_106354272
Length 192
Sequence MTQTQPGLSPAHRPPHLADLDGDPSGDAARERTYTWQDPSPIFATLGTRPGIELLKTMEAGGLPPPPIMHTLGLSGFTAEVGTATFTLVPREFHYNPLGTVHGGVIAMMLDSAAGCAVHSVLPAGEGYTSVDLVTKYLRPVTVETGEITAVGSVLSRGSRTALAEARLTDARGRLLAHATSTCMIFPIPQRP

Samples

Sample ID Description Type Environment
1 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
83 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
84 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
89 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
99 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
100 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
101 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
105 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
106 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
109 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
112 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
113 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
114 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
115 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
134 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
140 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
141 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
142 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
143 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
144 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
145 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
146 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
147 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
148 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.1
Metatranscriptomes 0.95
Isolates 0.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.86
Nodule 0
Rhizoplane 13.33
Rhizosphere 67.62
Stem 0
Stem Tuber 0
Unclassified 0.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307407_10635427 3300031903 Bacteria 798
2 JGI24740J21852_10024033 3300001979 Bacteria 2072
3 JGI24740J21852_10127444 3300001979 Bacteria 636
4 JGI24738J21930_10014510 3300002075 Bacteria 1689
5 JGI25406J46586_10001523 3300003203 Bacteria 10935
6 rootH2_10021694 3300003320 Bacteria 1312
7 rootH2_10050629 3300003320 Bacteria 3940
8 JGI25407J50210_10015727 3300003373 Bacteria 1956
9 Ga0070658_10085973 3300005327 Bacteria 2586
10 Ga0070683_100001649 3300005329 Bacteria 17295
11 Ga0070683_100027060 3300005329 Bacteria 5169
12 Ga0070677_10582716 3300005333 Bacteria 617
13 Ga0070682_100534922 3300005337 Bacteria 914
14 Ga0070661_100022592 3300005344 Bacteria 4504
15 Ga0070668_101457214 3300005347 Bacteria 625
16 Ga0070659_100111371 3300005366 Bacteria 2210
17 Ga0070667_100115986 3300005367 Bacteria 2326
18 Ga0070714_100530507 3300005435 Bacteria 1125
19 Ga0070713_100177774 3300005436 Bacteria 1911
20 Ga0070681_10091330 3300005458 Bacteria 2995
21 Ga0070679_100051546 3300005530 Bacteria 4099
22 Ga0070679_101412054 3300005530 Bacteria 642
23 Ga0070684_100001388 3300005535 Bacteria 17398
24 Ga0070684_100036450 3300005535 Bacteria 4214
25 Ga0068853_100332627 3300005539 Bacteria 1410
26 Ga0070686_100581606 3300005544 Bacteria 880
27 Ga0070665_100222540 3300005548 Bacteria 1888
28 Ga0068855_100449847 3300005563 Bacteria 1406
29 Ga0070664_100032997 3300005564 Bacteria 4332
30 Ga0070664_100552654 3300005564 Bacteria 1065
31 Ga0068857_100035451 3300005577 Bacteria 4418
32 Ga0068857_100584031 3300005577 Bacteria 1055
33 Ga0068854_100467056 3300005578 Bacteria 1057
34 Ga0068856_100139194 3300005614 Bacteria 2434
35 Ga0068856_100705940 3300005614 Bacteria 1029
36 Ga0068852_100378193 3300005616 Bacteria 1389
37 Ga0068852_100921579 3300005616 Bacteria 891
38 Ga0068863_100027665 3300005841 Bacteria 5410
39 Ga0068860_100163390 3300005843 Bacteria 2148
40 Ga0081538_10002858 3300005981 Bacteria 16515
41 Ga0081538_10108914 3300005981 Bacteria 1366
42 Ga0081540_1006547 3300005983 Bacteria 8459
43 Ga0081539_10000846 3300005985 Bacteria 58555
44 Ga0081539_10036091 3300005985 Bacteria 2963
45 Ga0075365_10060885 3300006038 Bacteria 2519
46 Ga0075365_10089183 3300006038 Bacteria 2099
47 Ga0075365_10143103 3300006038 Bacteria 1660
48 Ga0075365_10739653 3300006038 Bacteria 695
49 Ga0075368_10009866 3300006042 Bacteria 3442
50 Ga0075363_100051379 3300006048 Bacteria 2198
51 Ga0075364_10023482 3300006051 Bacteria 3904
52 Ga0075364_10049647 3300006051 Bacteria 2737
53 Ga0075364_10717909 3300006051 Bacteria 682
54 Ga0070716_100090267 3300006173 Bacteria 1853
55 Ga0075362_10042589 3300006177 Bacteria 2007
56 Ga0075367_10049502 3300006178 Bacteria 2477
57 Ga0075428_100002402 3300006844 Bacteria 20332
58 Ga0075428_100197820 3300006844 Bacteria 2174
59 Ga0075430_100251646 3300006846 Bacteria 1464
60 Ga0075431_100051804 3300006847 Bacteria 4232
61 Ga0075431_100080433 3300006847 Bacteria 3364
62 Ga0075433_10333409 3300006852 Bacteria 1341
63 Ga0075429_100004599 3300006880 Bacteria 11863
64 Ga0111539_10952028 3300009094 Bacteria 998
65 Ga0105245_10091642 3300009098 Bacteria 2797
66 Ga0114129_10074484 3300009147 Bacteria 4729
67 Ga0114129_10104133 3300009147 Bacteria 3922
68 Ga0105248_10115950 3300009177 Bacteria 3021
69 Ga0105248_10169610 3300009177 Bacteria 2460
70 Ga0105238_12019499 3300009551 Bacteria 610
71 Ga0105239_11422697 3300010375 Bacteria 801
72 Ga0105246_10444713 3300011119 Bacteria 1088
73 Ga0157369_10016273 3300013105 Bacteria 8373
74 Ga0157369_12158830 3300013105 Bacteria 565
75 Ga0157372_10277043 3300013307 Bacteria 1950
76 Ga0157372_10595465 3300013307 Bacteria 1289
77 Ga0163163_10006927 3300014325 Bacteria 9955
78 Ga0163163_11681442 3300014325 Bacteria 695
79 Ga0206354_11643845 3300020081 Bacteria 554
80 Ga0206353_11331478 3300020082 Bacteria 4183
81 Ga0213876_10014630 3300021384 Bacteria 4157
82 Ga0224572_1000419 3300024225 Bacteria 4883
83 Ga0207647_10005576 3300025904 Bacteria 9204
84 Ga0207705_10067790 3300025909 Bacteria 2583
85 Ga0207707_11193821 3300025912 Bacteria 616
86 Ga0207660_10380046 3300025917 Bacteria 1135
87 Ga0207657_10086897 3300025919 Bacteria 2616
88 Ga0207649_10031489 3300025920 Bacteria 3153
89 Ga0207687_10203796 3300025927 Bacteria 1548
90 Ga0207700_10278665 3300025928 Bacteria 1438
91 Ga0207690_10053015 3300025932 Bacteria 2720
92 Ga0207711_10045532 3300025941 Bacteria 3749
93 Ga0207689_10085888 3300025942 Bacteria 2587
94 Ga0207661_10012999 3300025944 Bacteria 6075
95 Ga0207661_10250347 3300025944 Bacteria 1574
96 Ga0207661_10337746 3300025944 Bacteria 1357
97 Ga0207679_10147799 3300025945 Bacteria 1908
98 Ga0207679_11702333 3300025945 Bacteria 577
99 Ga0207668_10476038 3300025972 Bacteria 1070
100 Ga0207668_10966032 3300025972 Bacteria 760
101 Ga0207677_10435577 3300026023 Bacteria 1120
102 Ga0207702_10263433 3300026078 Bacteria 1624
103 Ga0207641_10040765 3300026088 Bacteria 3889
104 Ga0207641_10740691 3300026088 Bacteria 970
105 Ga0207676_10113342 3300026095 Bacteria 2273
106 Ga0207676_10402459 3300026095 Bacteria 1280
107 Ga0207676_10550838 3300026095 Bacteria 1102
108 Ga0207674_10043584 3300026116 Bacteria 4626
109 Ga0207674_10077858 3300026116 Bacteria 3321
110 Ga0207674_10528380 3300026116 Bacteria 1140
111 Ga0207675_101285119 3300026118 Bacteria 752
112 Ga0207683_10069576 3300026121 Bacteria 3109
113 Ga0268266_10531343 3300028379 Bacteria 1125
114 Ga0307515_10013838 3300028794 Bacteria 15030
115 Ga0307512_10028662 3300030522 Bacteria 4877
116 Ga0316181_1059191 3300030744 Bacteria 909
117 Ga0307513_10036859 3300031456 Bacteria 5447
118 Ga0307513_10048269 3300031456 Bacteria 4622
119 Ga0307508_10008441 3300031616 Bacteria 9514
120 Ga0307508_10201292 3300031616 Bacteria 1592
121 Ga0307516_10021872 3300031730 Bacteria 6570
122 Ga0307405_10470699 3300031731 Bacteria 1001
123 Ga0307405_10527155 3300031731 Bacteria 952
124 Ga0307405_11330230 3300031731 Bacteria 626
125 Ga0307410_10179063 3300031852 Bacteria 1604
126 Ga0307410_11272382 3300031852 Bacteria 643
127 Ga0307406_10886443 3300031901 Bacteria 759
128 Ga0307409_100582631 3300031995 Bacteria 1103
129 Ga0307409_100779369 3300031995 Bacteria 962
130 Ga0307409_100981466 3300031995 Bacteria 862
131 Ga0307416_100523974 3300032002 Bacteria 1254
132 Ga0307416_100714700 3300032002 Bacteria 1092
133 Ga0307411_10713637 3300032005 Bacteria 875
134 Ga0307415_100024509 3300032126 Bacteria 3768
135 Ga0307415_100197228 3300032126 Bacteria 1594
136 Ga0395900_0663647 3300037418 Unclassified 979
137 Ga0436364_1218979 3300037853 Bacteria 1964
138 Ga0436365_0175677 3300039437 Bacteria 30988
139 Ga0436363_0047602 3300039450 Bacteria 1381
140 Ga0436362_0147919 3300039453 Bacteria 5444
141 Ga0451802_0636556 3300041460 Bacteria 949
142 Ga0450907_005053 3300042146 Bacteria 2240
143 Ga0466966_0029390 3300044684 Bacteria 3576
144 Ga0466970_0523647 3300044765 Bacteria 684
145 Ga0466958_0077690 3300045836 Bacteria 2039
146 Ga0495594_0124931 3300046499 Bacteria 1455
147 Ga0495611_0148391 3300046648 Bacteria 1095
148 Ga0495658_0777041 3300046683 Bacteria 613
149 Ga0495670_0304696 3300046691 Bacteria 854
150 Ga0495589_0015029 3300046794 Bacteria 3984
151 Ga0495581_0618907 3300047315 Bacteria 627
152 Ga0495636_0179497 3300047318 Bacteria 960
153 Ga0495683_0200613 3300047323 Bacteria 900
154 Ga0495685_001181 3300047447 Bacteria 7982
155 Ga0496100_0145171 3300048903 Bacteria 1686
156 Ga0496100_0294063 3300048903 Bacteria 1214
157 Ga0496101_0014620 3300048904 Bacteria 5279
158 Ga0496102_0014521 3300048905 Bacteria 6843
159 Ga0496103_0006703 3300048906 Bacteria 6871
160 Ga0496104_0214647 3300048907 Bacteria 1836
161 Ga0496104_0437479 3300048907 Bacteria 1220
162 Ga0496104_0470858 3300048907 Bacteria 1168
163 Ga0496105_0168214 3300048908 Bacteria 1798
164 Ga0496105_0422847 3300048908 Bacteria 1055
165 Ga0496106_0885358 3300048909 Bacteria 705
166 Ga0496107_0012586 3300048910 Bacteria 5908
167 Ga0496108_0000227 3300048911 Bacteria 50319
168 Ga0496108_0045399 3300048911 Bacteria 3670
169 Ga0496108_0704185 3300048911 Bacteria 876
170 Ga0496108_1201955 3300048911 Bacteria 641
171 Ga0496108_1379901 3300048911 Bacteria 590
172 Ga0496109_0195810 3300048912 Bacteria 1899
173 Ga0496109_0366555 3300048912 Bacteria 1361
174 Ga0496109_0517852 3300048912 Bacteria 1126
175 Ga0496110_0261610 3300048913 Bacteria 1575
176 Ga0496110_0587961 3300048913 Bacteria 1010
177 Ga0496111_0056987 3300048914 Bacteria 2828
178 Ga0496112_0008739 3300048915 Bacteria 9085
179 Ga0496112_0154073 3300048915 Bacteria 2265
180 Ga0496112_0544210 3300048915 Bacteria 1095
181 Ga0496113_0100435 3300048916 Bacteria 2242
182 Ga0501042_0160539 3300049578 Bacteria 1622
183 Ga0501067_0003308 3300049583 Bacteria 8866
184 Ga0501044_0113482 3300049823 Bacteria 2717
185 nmdc:mga00v17_222451_c1 3300050491 Bacteria 1222
186 nmdc:mga00v17_7716_c1 3300050491 Bacteria 5761
187 nmdc:mga0yw44_122707_c1 3300050492 Bacteria 1675
188 nmdc:mga0yw44_124396_c1 3300050492 Bacteria 1664
189 nmdc:mga0yw44_2470_c2 3300050492 Bacteria 4173
190 nmdc:mga06z11_321821_c1 3300050494 Bacteria 923
191 nmdc:mga06z11_678709_c1 3300050494 Bacteria 627
192 nmdc:mga07m45_177985_c1 3300050496 Bacteria 1237
193 nmdc:mga05p37_108223_c1 3300050507 Bacteria 3419
194 nmdc:mga05p37_198030_c1 3300050507 Bacteria 2435
195 nmdc:mga0qj67_24346_c1 3300050509 Bacteria 4666
196 nmdc:mga0qj67_245577_c1 3300050509 Bacteria 1452
197 nmdc:mga06r32_148514_c1 3300050510 Bacteria 2322
198 nmdc:mga06r32_14871_c1 3300050510 Bacteria 7061
199 nmdc:mga08y16_461585_c1 3300050511 Bacteria 1294
200 nmdc:mga08y16_807462_c1 3300050511 Bacteria 930
201 nmdc:mga0sz30_5293_c1 3300050516 Bacteria 4726
202 Ga0500644_0000050 3300053088 Bacteria 71907
203 Ga0500646_0000349 3300053090 Bacteria 13889
204 Ga0500651_0095532 3300053093 Bacteria 1827
205 Ga0500641_0051660 3300053096 Bacteria 1692
206 Ga0500654_163141 3300053099 Bacteria 751
207 Ga0500600_0150745 3300053149 Bacteria 1156
208 Ga0500620_267713 3300053155 Bacteria 563
209 2676487298 2675903059 Bacteria 8644972
210 2918508564 2918501144 Bacteria 8668083
211 Ga0307407_10635427
212 JGI24740J21852_10024033
213 JGI24740J21852_10127444
214 JGI24738J21930_10014510
215 JGI25406J46586_10001523
216 rootH2_10021694
217 rootH2_10050629
218 JGI25407J50210_10015727
219 Ga0070658_10085973
220 Ga0070683_100001649
221 Ga0070683_100027060
222 Ga0070677_10582716
223 Ga0070682_100534922
224 Ga0070661_100022592
225 Ga0070668_101457214
226 Ga0070659_100111371
227 Ga0070667_100115986
228 Ga0070714_100530507
229 Ga0070713_100177774
230 Ga0070681_10091330
231 Ga0070679_100051546
232 Ga0070679_101412054
233 Ga0070684_100001388
234 Ga0070684_100036450
235 Ga0068853_100332627
236 Ga0070686_100581606
237 Ga0070665_100222540
238 Ga0068855_100449847
239 Ga0070664_100032997
240 Ga0070664_100552654
241 Ga0068857_100035451
242 Ga0068857_100584031
243 Ga0068854_100467056
244 Ga0068856_100139194
245 Ga0068856_100705940
246 Ga0068852_100378193
247 Ga0068852_100921579
248 Ga0068863_100027665
249 Ga0068860_100163390
250 Ga0081538_10002858
251 Ga0081538_10108914
252 Ga0081540_1006547
253 Ga0081539_10000846
254 Ga0081539_10036091
255 Ga0075365_10060885
256 Ga0075365_10089183
257 Ga0075365_10143103
258 Ga0075365_10739653
259 Ga0075368_10009866
260 Ga0075363_100051379
261 Ga0075364_10023482
262 Ga0075364_10049647
263 Ga0075364_10717909
264 Ga0070716_100090267
265 Ga0075362_10042589
266 Ga0075367_10049502
267 Ga0075428_100002402
268 Ga0075428_100197820
269 Ga0075430_100251646
270 Ga0075431_100051804
271 Ga0075431_100080433
272 Ga0075433_10333409
273 Ga0075429_100004599
274 Ga0111539_10952028
275 Ga0105245_10091642
276 Ga0114129_10074484
277 Ga0114129_10104133
278 Ga0105248_10115950
279 Ga0105248_10169610
280 Ga0105238_12019499
281 Ga0105239_11422697
282 Ga0105246_10444713
283 Ga0157369_10016273
284 Ga0157369_12158830
285 Ga0157372_10277043
286 Ga0157372_10595465
287 Ga0163163_10006927
288 Ga0163163_11681442
289 Ga0206354_11643845
290 Ga0206353_11331478
291 Ga0213876_10014630
292 Ga0224572_1000419
293 Ga0207647_10005576
294 Ga0207705_10067790
295 Ga0207707_11193821
296 Ga0207660_10380046
297 Ga0207657_10086897
298 Ga0207649_10031489
299 Ga0207687_10203796
300 Ga0207700_10278665
301 Ga0207690_10053015
302 Ga0207711_10045532
303 Ga0207689_10085888
304 Ga0207661_10012999
305 Ga0207661_10250347
306 Ga0207661_10337746
307 Ga0207679_10147799
308 Ga0207679_11702333
309 Ga0207668_10476038
310 Ga0207668_10966032
311 Ga0207677_10435577
312 Ga0207702_10263433
313 Ga0207641_10040765
314 Ga0207641_10740691
315 Ga0207676_10113342
316 Ga0207676_10402459
317 Ga0207676_10550838
318 Ga0207674_10043584
319 Ga0207674_10077858
320 Ga0207674_10528380
321 Ga0207675_101285119
322 Ga0207683_10069576
323 Ga0268266_10531343
324 Ga0307515_10013838
325 Ga0307512_10028662
326 Ga0316181_1059191
327 Ga0307513_10036859
328 Ga0307513_10048269
329 Ga0307508_10008441
330 Ga0307508_10201292
331 Ga0307516_10021872
332 Ga0307405_10470699
333 Ga0307405_10527155
334 Ga0307405_11330230
335 Ga0307410_10179063
336 Ga0307410_11272382
337 Ga0307406_10886443
338 Ga0307409_100582631
339 Ga0307409_100779369
340 Ga0307409_100981466
341 Ga0307416_100523974
342 Ga0307416_100714700
343 Ga0307411_10713637
344 Ga0307415_100024509
345 Ga0307415_100197228
346 Ga0395900_0663647
347 Ga0436364_1218979
348 Ga0436365_0175677
349 Ga0436363_0047602
350 Ga0436362_0147919
351 Ga0451802_0636556
352 Ga0450907_005053
353 Ga0466966_0029390
354 Ga0466970_0523647
355 Ga0466958_0077690
356 Ga0495594_0124931
357 Ga0495611_0148391
358 Ga0495658_0777041
359 Ga0495670_0304696
360 Ga0495589_0015029
361 Ga0495581_0618907
362 Ga0495636_0179497
363 Ga0495683_0200613
364 Ga0495685_001181
365 Ga0496100_0145171
366 Ga0496100_0294063
367 Ga0496101_0014620
368 Ga0496102_0014521
369 Ga0496103_0006703
370 Ga0496104_0214647
371 Ga0496104_0437479
372 Ga0496104_0470858
373 Ga0496105_0168214
374 Ga0496105_0422847
375 Ga0496106_0885358
376 Ga0496107_0012586
377 Ga0496108_0000227
378 Ga0496108_0045399
379 Ga0496108_0704185
380 Ga0496108_1201955
381 Ga0496108_1379901
382 Ga0496109_0195810
383 Ga0496109_0366555
384 Ga0496109_0517852
385 Ga0496110_0261610
386 Ga0496110_0587961
387 Ga0496111_0056987
388 Ga0496112_0008739
389 Ga0496112_0154073
390 Ga0496112_0544210
391 Ga0496113_0100435
392 Ga0501042_0160539
393 Ga0501067_0003308
394 Ga0501044_0113482
395 nmdc:mga00v17_222451_c1
396 nmdc:mga00v17_7716_c1
397 nmdc:mga0yw44_122707_c1
398 nmdc:mga0yw44_124396_c1
399 nmdc:mga0yw44_2470_c2
400 nmdc:mga06z11_321821_c1
401 nmdc:mga06z11_678709_c1
402 nmdc:mga07m45_177985_c1
403 nmdc:mga05p37_108223_c1
404 nmdc:mga05p37_198030_c1
405 nmdc:mga0qj67_24346_c1
406 nmdc:mga0qj67_245577_c1
407 nmdc:mga06r32_148514_c1
408 nmdc:mga06r32_14871_c1
409 nmdc:mga08y16_461585_c1
410 nmdc:mga08y16_807462_c1
411 nmdc:mga0sz30_5293_c1
412 Ga0500644_0000050
413 Ga0500646_0000349
414 Ga0500651_0095532
415 Ga0500641_0051660
416 Ga0500654_163141
417 Ga0500600_0150745
418 Ga0500620_267713
419 2676487298
420 2918508564

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03061

4HBT

Thioesterase superfamily

98

177

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dsl-assembly1.cif.gz_A mutant n33d structure of phenylacetic acid degradation protein paai from thermus thermophilus hb8 0.8855 38 155
1wlu-assembly1.cif.gz_A crystal structure of tt0310 protein from thermus thermophilus hb8 0.8799 35 155
5hmb-assembly1.cif.gz_A crystal structure of s. sahachiroi azig 0.8793 35 159
5hmb-assembly1.cif.gz_A crystal structure of s. sahachiroi azig 0.8728 35 159
1zki-assembly1.cif.gz_B structure of conserved protein pa5202 from pseudomonas aeruginosa 0.8722 36 157
ID Description Score Start End Superfamily
af_Q5A0N4_66_202_3.10.129.10 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8895 97 158 3.10.129.10
4m20A00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8801 38 156 3.10.129.10
1wluA00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8799 35 155 3.10.129.10
1zkiB00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8753 36 157 3.10.129.10
4xy5A00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8709 48 158 3.10.129.10
ID Description Score Start End GO Terms
AF-A0A7W4CNM1-F1-model_v4 PaaI family thioesterase 0.9762 80 161 GO:0005829
GO:0061522
AF-A0A3S2GAV9-F1-model_v4 deleted 0.9724 79 158
AF-A0A270AKU5-F1-model_v4 deleted 0.9686 78 159
AF-A0A3C0M345-F1-model_v4 deleted 0.9663 75 158
AF-A0A4V2AJQ5-F1-model_v4 deleted 0.9653 73 162

Map