F320516

General Info

Members Datasets Scaffolds Average Seq Length
210 127 420 292

Family's Representative Sequence

Representative Sequence 3300031090|Ga0265760_10041118|Ga0265760_100411182
Length 306
Sequence MTQVNLEVRAISGHAGPAPGTGLKREFEVCKLIDTTTCIGCKACEVACLEWNGYTFSETTFDNSYQTMPETAWNYWNLIKFNEHEREDGSMMLLMRKDQCMHCEDPGCLAACPADAAIVQYVNGIVDFQEANCIGCGYCMTGCPFNIPKFSPTARKVFKCTLCNDRVSVGLEPACIKACPTGCLHFGTKKEMKELAQTRADQLRDVSGFADAGVYDPPGVGGTHVIYVLHDAKNPELYGGLPKDPHIPYSVRLWKGPLKWLGNLAMVGGLVGLAWHYLRFGPKKEEPIPPGDGNGDGMVGRSERRP

Samples

Sample ID Description Type Environment
1 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
49 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
67 3300028023 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
70 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
71 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
73 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
74 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
78 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
79 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
80 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
95 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
96 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
101 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
102 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
108 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
109 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.19
Metatranscriptomes 3.81
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.38
Rhizosphere 97.14
Stem 0
Stem Tuber 0
Unclassified 9.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265760_10041118 3300031090 Unclassified 1378
2 Ga0058863_11648706 3300004799 Unclassified 1178
3 Ga0058862_12581089 3300004803 Unclassified 1811
4 Ga0070688_100014047 3300005365 Bacteria 4530
5 Ga0070709_10001166 3300005434 Bacteria 14415
6 Ga0070709_10019742 3300005434 Unclassified 3901
7 Ga0070709_10234892 3300005434 Unclassified 1314
8 Ga0070713_100036795 3300005436 Bacteria 3953
9 Ga0070713_100075824 3300005436 Bacteria 2854
10 Ga0070713_100184858 3300005436 Bacteria 1875
11 Ga0070711_100000781 3300005439 Bacteria 16615
12 Ga0070711_100189179 3300005439 Bacteria 1581
13 Ga0070708_100007670 3300005445 Bacteria 8646
14 Ga0070708_100011408 3300005445 Bacteria 7231
15 Ga0070708_100239440 3300005445 Bacteria 1704
16 Ga0070706_100004343 3300005467 Bacteria 13711
17 Ga0070706_100102524 3300005467 Bacteria 2660
18 Ga0070707_100000416 3300005468 Bacteria 42080
19 Ga0070707_100006382 3300005468 Bacteria 10964
20 Ga0070707_100017627 3300005468 Bacteria 6717
21 Ga0070707_100089017 3300005468 Bacteria 2986
22 Ga0070707_100197170 3300005468 Bacteria 1963
23 Ga0070698_100000900 3300005471 Bacteria 32637
24 Ga0070698_100049258 3300005471 Unclassified 4301
25 Ga0070698_100056652 3300005471 Bacteria 3971
26 Ga0070699_100002656 3300005518 Bacteria 15972
27 Ga0070699_100021873 3300005518 Bacteria 5511
28 Ga0070699_100044725 3300005518 Bacteria 3833
29 Ga0070697_100106771 3300005536 Bacteria 2329
30 Ga0070695_100057175 3300005545 Bacteria 2520
31 Ga0070695_100215714 3300005545 Bacteria 1380
32 Ga0070693_100023940 3300005547 Bacteria 3270
33 Ga0068856_100175527 3300005614 Bacteria 2155
34 Ga0068852_100248963 3300005616 Bacteria 1702
35 Ga0068863_100031688 3300005841 Bacteria 5044
36 Ga0068858_100072225 3300005842 Bacteria 3202
37 Ga0068860_100002021 3300005843 Bacteria 21410
38 Ga0070717_10087615 3300006028 Bacteria 2622
39 Ga0070717_10115802 3300006028 Bacteria 2291
40 Ga0070717_10263321 3300006028 Bacteria 1526
41 Ga0070715_10131567 3300006163 Bacteria 1205
42 Ga0070716_100071338 3300006173 Bacteria 2042
43 Ga0070716_100092038 3300006173 Bacteria 1838
44 Ga0070716_100146535 3300006173 Bacteria 1513
45 Ga0070712_100002281 3300006175 Bacteria 11816
46 Ga0070712_100222562 3300006175 Bacteria 1495
47 Ga0097621_100001861 3300006237 Bacteria 14473
48 Ga0075428_100219615 3300006844 Bacteria 2053
49 Ga0075431_100003707 3300006847 Bacteria 14845
50 Ga0075433_10179169 3300006852 Bacteria 1885
51 Ga0075433_10375557 3300006852 Unclassified 1255
52 Ga0075434_100007526 3300006871 Bacteria 10084
53 Ga0075434_100388286 3300006871 Bacteria 1417
54 Ga0075434_100476791 3300006871 Bacteria 1269
55 Ga0068865_100069800 3300006881 Bacteria 2488
56 Ga0075436_100031686 3300006914 Bacteria 3642
57 Ga0075435_100085777 3300007076 Bacteria 2592
58 Ga0099794_10040965 3300007265 Bacteria 2204
59 Ga0099794_10178735 3300007265 Bacteria 1083
60 Ga0099795_10012854 3300007788 Bacteria 2551
61 Ga0105240_10018024 3300009093 Bacteria 9497
62 Ga0111539_10886229 3300009094 Bacteria 1038
63 Ga0111539_10984375 3300009094 Bacteria 980
64 Ga0105245_10347658 3300009098 Bacteria 1468
65 Ga0114129_10539090 3300009147 Unclassified 1519
66 Ga0105248_10204094 3300009177 Bacteria 2227
67 Ga0105237_10160322 3300009545 Bacteria 2248
68 Ga0105238_10062958 3300009551 Bacteria 3710
69 Ga0157369_10024910 3300013105 Bacteria 6648
70 Ga0157369_10054537 3300013105 Bacteria 4316
71 Ga0157374_10299782 3300013296 Bacteria 1590
72 Ga0163163_10016239 3300014325 Bacteria 6912
73 Ga0163163_10352725 3300014325 Unclassified 1527
74 Ga0157379_10064454 3300014968 Bacteria 3274
75 Ga0157376_10000029 3300014969 Bacteria 201828
76 Ga0206356_10902708 3300020070 Unclassified 1245
77 Ga0224569_100021 3300022732 Bacteria 9369
78 Ga0228598_1000679 3300024227 Bacteria 7196
79 Ga0228598_1000837 3300024227 Bacteria 6646
80 Ga0228598_1001403 3300024227 Bacteria 5301
81 Ga0207699_10001624 3300025906 Bacteria 10668
82 Ga0207699_10054534 3300025906 Bacteria 2375
83 Ga0207699_10067174 3300025906 Bacteria 2179
84 Ga0207699_10199553 3300025906 Unclassified 1355
85 Ga0207684_10000843 3300025910 Bacteria 35325
86 Ga0207684_10013363 3300025910 Bacteria 7102
87 Ga0207684_10092154 3300025910 Bacteria 2583
88 Ga0207684_10102965 3300025910 Bacteria 2441
89 Ga0207695_10003354 3300025913 Bacteria 22633
90 Ga0207695_10466788 3300025913 Bacteria 1145
91 Ga0207671_10310878 3300025914 Bacteria 1246
92 Ga0207693_10000256 3300025915 Bacteria 48996
93 Ga0207693_10019718 3300025915 Bacteria 5362
94 Ga0207663_10028301 3300025916 Bacteria 3279
95 Ga0207663_10149651 3300025916 Bacteria 1636
96 Ga0207663_10355954 3300025916 Unclassified 1109
97 Ga0207646_10006882 3300025922 Bacteria 11676
98 Ga0207646_10015769 3300025922 Bacteria 7117
99 Ga0207694_10097259 3300025924 Bacteria 2329
100 Ga0207700_10048289 3300025928 Bacteria 3160
101 Ga0207700_10260476 3300025928 Bacteria 1485
102 Ga0207670_10166469 3300025936 Bacteria 1650
103 Ga0207665_10013353 3300025939 Bacteria 5399
104 Ga0207665_10180427 3300025939 Bacteria 1529
105 Ga0207665_10428810 3300025939 Bacteria 1011
106 Ga0207711_10292676 3300025941 Bacteria 1501
107 Ga0207711_10308484 3300025941 Bacteria 1461
108 Ga0207702_10244691 3300026078 Bacteria 1682
109 Ga0207641_10000423 3300026088 Bacteria 49293
110 Ga0207641_10064321 3300026088 Bacteria 3135
111 Ga0209179_1033411 3300027512 Bacteria 1063
112 Ga0209588_1056763 3300027671 Bacteria 1266
113 Ga0265354_1000838 3300028016 Bacteria 4954
114 Ga0265354_1006125 3300028016 Bacteria 1199
115 Ga0265357_1002394 3300028023 Bacteria 1528
116 Ga0268264_10012234 3300028381 Bacteria 7060
117 Ga0268264_10036241 3300028381 Bacteria 4063
118 Ga0265319_1036595 3300028563 Bacteria 1678
119 Ga0265334_10064917 3300028573 Unclassified 1370
120 Ga0265762_1003950 3300030760 Bacteria 2655
121 Ga0265762_1005887 3300030760 Bacteria 2198
122 Ga0265760_10001606 3300031090 Bacteria 6640
123 Ga0265760_10001811 3300031090 Bacteria 6277
124 Ga0265320_10080614 3300031240 Bacteria 1520
125 Ga0265320_10108321 3300031240 Bacteria 1275
126 Ga0265325_10001173 3300031241 Bacteria 18706
127 Ga0265339_10079433 3300031249 Bacteria 1736
128 Ga0265314_10013470 3300031711 Bacteria 6603
129 Ga0265342_10109583 3300031712 Bacteria 1564
130 Ga0316212_1007265 3300033547 Bacteria 1600
131 Ga0373956_0012693 3300035119 Bacteria 3496
132 Ga0373957_0078783 3300035120 Bacteria 1298
133 Ga0373946_0018126 3300035171 Bacteria 2699
134 Ga0373955_0003979 3300035172 Bacteria 6524
135 Ga0373927_0000871 3300035695 Bacteria 23001
136 Ga0373933_0002758 3300035724 Bacteria 9800
137 Ga0373947_0001791 3300035725 Bacteria 13147
138 Ga0373937_0000412 3300036401 Bacteria 39962
139 Ga0373937_0208763 3300036401 Bacteria 1837
140 Ga0373937_0243683 3300036401 Bacteria 1694
141 Ga0373937_0442210 3300036401 Bacteria 1234
142 Ga0373925_0000656 3300037068 Bacteria 32516
143 Ga0373925_0197584 3300037068 Bacteria 1598
144 Ga0466959_0018777 3300045049 Bacteria 5079
145 Ga0451576_0025135 3300045051 Bacteria 6421
146 Ga0495592_0276525 3300046454 Bacteria 1099
147 Ga0495629_0270212 3300046459 Bacteria 1168
148 Ga0495651_0042162 3300046462 Bacteria 3544
149 Ga0495651_0044840 3300046462 Unclassified 3426
150 Ga0495651_0098526 3300046462 Bacteria 2181
151 Ga0495653_0028316 3300046463 Bacteria 4480
152 Ga0495653_0307544 3300046463 Bacteria 1032
153 Ga0495580_0000575 3300046472 Bacteria 30922
154 Ga0495580_0001776 3300046472 Bacteria 18958
155 Ga0495580_0075885 3300046472 Bacteria 2345
156 Ga0495580_0244645 3300046472 Bacteria 1229
157 Ga0495582_0000120 3300046473 Bacteria 41888
158 Ga0495582_0142617 3300046473 Bacteria 1358
159 Ga0495662_0142856 3300046476 Bacteria 1178
160 Ga0495664_0002839 3300046477 Bacteria 9326
161 Ga0495628_0034289 3300046516 Unclassified 4083
162 Ga0495628_0333233 3300046516 Bacteria 1118
163 Ga0495630_0000030 3300046517 Bacteria 139077
164 Ga0495630_0177860 3300046517 Bacteria 1622
165 Ga0495652_0139286 3300046529 Bacteria 1910
166 Ga0495665_0038426 3300046531 Bacteria 2552
167 Ga0495665_0045229 3300046531 Bacteria 2339
168 Ga0495587_0000200 3300046536 Bacteria 43851
169 Ga0495645_0015841 3300046543 Bacteria 5368
170 Ga0495667_0262892 3300046559 Bacteria 1097
171 Ga0495634_0034963 3300046642 Unclassified 3445
172 Ga0495635_0022533 3300046663 Bacteria 4388
173 Ga0495657_0259845 3300046675 Unclassified 1044
174 Ga0495599_0002655 3300046678 Bacteria 10429
175 Ga0495623_0062767 3300046679 Bacteria 2328
176 Ga0495623_0063233 3300046679 Bacteria 2318
177 Ga0495647_0152831 3300046681 Bacteria 990
178 Ga0495613_0167062 3300046689 Unclassified 1563
179 Ga0495604_0065819 3300047317 Bacteria 2758
180 Ga0495604_0129447 3300047317 Bacteria 1816
181 Ga0495604_0355745 3300047317 Bacteria 972
182 Ga0495674_0008174 3300047319 Bacteria 9981
183 Ga0495674_0009803 3300047319 Bacteria 9095
184 Ga0495674_0050068 3300047319 Bacteria 3687
185 Ga0495674_0206329 3300047319 Bacteria 1629
186 Ga0495680_0084876 3300047322 Unclassified 2386
187 Ga0495675_0002119 3300047444 Bacteria 11820
188 Ga0495675_0050361 3300047444 Bacteria 2647
189 Ga0495675_0171145 3300047444 Bacteria 1334
190 Ga0495684_0010786 3300047471 Bacteria 7063
191 Ga0495684_0077768 3300047471 Bacteria 2518
192 Ga0495602_0005701 3300048088 Bacteria 13058
193 Ga0495602_0040871 3300048088 Unclassified 4243
194 Ga0495602_0048881 3300048088 Bacteria 3795
195 Ga0496102_0007643 3300048905 Bacteria 9234
196 Ga0496103_0036932 3300048906 Bacteria 2993
197 Ga0496110_0026200 3300048913 Bacteria 4987
198 Ga0496111_0000980 3300048914 Bacteria 15629
199 Ga0496115_0005341 3300048918 Bacteria 9347
200 nmdc:mga05p37_588200_c1 3300050507 Bacteria 1259
201 nmdc:mga06r32_5540_c1 3300050510 Bacteria 11376
202 nmdc:mga0n895_165262_c1 3300050512 Bacteria 2245
203 nmdc:mga0n895_174391_c1 3300050512 Bacteria 2181
204 nmdc:mga0n895_351879_c1 3300050512 Bacteria 1492
205 nmdc:mga0n895_6212_c1 3300050512 Bacteria 10106
206 nmdc:mga0rr50_251775_c1 3300050513 Bacteria 1467
207 nmdc:mga0rr50_369162_c1 3300050513 Bacteria 1209
208 nmdc:mga08x19_21985_c1 3300050514 Bacteria 3945
209 nmdc:mga08x19_6578_c1 3300050514 Bacteria 6887
210 Ga0495601_0173296 3300053077 Bacteria 1410
211 Ga0265760_10041118
212 Ga0058863_11648706
213 Ga0058862_12581089
214 Ga0070688_100014047
215 Ga0070709_10001166
216 Ga0070709_10019742
217 Ga0070709_10234892
218 Ga0070713_100036795
219 Ga0070713_100075824
220 Ga0070713_100184858
221 Ga0070711_100000781
222 Ga0070711_100189179
223 Ga0070708_100007670
224 Ga0070708_100011408
225 Ga0070708_100239440
226 Ga0070706_100004343
227 Ga0070706_100102524
228 Ga0070707_100000416
229 Ga0070707_100006382
230 Ga0070707_100017627
231 Ga0070707_100089017
232 Ga0070707_100197170
233 Ga0070698_100000900
234 Ga0070698_100049258
235 Ga0070698_100056652
236 Ga0070699_100002656
237 Ga0070699_100021873
238 Ga0070699_100044725
239 Ga0070697_100106771
240 Ga0070695_100057175
241 Ga0070695_100215714
242 Ga0070693_100023940
243 Ga0068856_100175527
244 Ga0068852_100248963
245 Ga0068863_100031688
246 Ga0068858_100072225
247 Ga0068860_100002021
248 Ga0070717_10087615
249 Ga0070717_10115802
250 Ga0070717_10263321
251 Ga0070715_10131567
252 Ga0070716_100071338
253 Ga0070716_100092038
254 Ga0070716_100146535
255 Ga0070712_100002281
256 Ga0070712_100222562
257 Ga0097621_100001861
258 Ga0075428_100219615
259 Ga0075431_100003707
260 Ga0075433_10179169
261 Ga0075433_10375557
262 Ga0075434_100007526
263 Ga0075434_100388286
264 Ga0075434_100476791
265 Ga0068865_100069800
266 Ga0075436_100031686
267 Ga0075435_100085777
268 Ga0099794_10040965
269 Ga0099794_10178735
270 Ga0099795_10012854
271 Ga0105240_10018024
272 Ga0111539_10886229
273 Ga0111539_10984375
274 Ga0105245_10347658
275 Ga0114129_10539090
276 Ga0105248_10204094
277 Ga0105237_10160322
278 Ga0105238_10062958
279 Ga0157369_10024910
280 Ga0157369_10054537
281 Ga0157374_10299782
282 Ga0163163_10016239
283 Ga0163163_10352725
284 Ga0157379_10064454
285 Ga0157376_10000029
286 Ga0206356_10902708
287 Ga0224569_100021
288 Ga0228598_1000679
289 Ga0228598_1000837
290 Ga0228598_1001403
291 Ga0207699_10001624
292 Ga0207699_10054534
293 Ga0207699_10067174
294 Ga0207699_10199553
295 Ga0207684_10000843
296 Ga0207684_10013363
297 Ga0207684_10092154
298 Ga0207684_10102965
299 Ga0207695_10003354
300 Ga0207695_10466788
301 Ga0207671_10310878
302 Ga0207693_10000256
303 Ga0207693_10019718
304 Ga0207663_10028301
305 Ga0207663_10149651
306 Ga0207663_10355954
307 Ga0207646_10006882
308 Ga0207646_10015769
309 Ga0207694_10097259
310 Ga0207700_10048289
311 Ga0207700_10260476
312 Ga0207670_10166469
313 Ga0207665_10013353
314 Ga0207665_10180427
315 Ga0207665_10428810
316 Ga0207711_10292676
317 Ga0207711_10308484
318 Ga0207702_10244691
319 Ga0207641_10000423
320 Ga0207641_10064321
321 Ga0209179_1033411
322 Ga0209588_1056763
323 Ga0265354_1000838
324 Ga0265354_1006125
325 Ga0265357_1002394
326 Ga0268264_10012234
327 Ga0268264_10036241
328 Ga0265319_1036595
329 Ga0265334_10064917
330 Ga0265762_1003950
331 Ga0265762_1005887
332 Ga0265760_10001606
333 Ga0265760_10001811
334 Ga0265320_10080614
335 Ga0265320_10108321
336 Ga0265325_10001173
337 Ga0265339_10079433
338 Ga0265314_10013470
339 Ga0265342_10109583
340 Ga0316212_1007265
341 Ga0373956_0012693
342 Ga0373957_0078783
343 Ga0373946_0018126
344 Ga0373955_0003979
345 Ga0373927_0000871
346 Ga0373933_0002758
347 Ga0373947_0001791
348 Ga0373937_0000412
349 Ga0373937_0208763
350 Ga0373937_0243683
351 Ga0373937_0442210
352 Ga0373925_0000656
353 Ga0373925_0197584
354 Ga0466959_0018777
355 Ga0451576_0025135
356 Ga0495592_0276525
357 Ga0495629_0270212
358 Ga0495651_0042162
359 Ga0495651_0044840
360 Ga0495651_0098526
361 Ga0495653_0028316
362 Ga0495653_0307544
363 Ga0495580_0000575
364 Ga0495580_0001776
365 Ga0495580_0075885
366 Ga0495580_0244645
367 Ga0495582_0000120
368 Ga0495582_0142617
369 Ga0495662_0142856
370 Ga0495664_0002839
371 Ga0495628_0034289
372 Ga0495628_0333233
373 Ga0495630_0000030
374 Ga0495630_0177860
375 Ga0495652_0139286
376 Ga0495665_0038426
377 Ga0495665_0045229
378 Ga0495587_0000200
379 Ga0495645_0015841
380 Ga0495667_0262892
381 Ga0495634_0034963
382 Ga0495635_0022533
383 Ga0495657_0259845
384 Ga0495599_0002655
385 Ga0495623_0062767
386 Ga0495623_0063233
387 Ga0495647_0152831
388 Ga0495613_0167062
389 Ga0495604_0065819
390 Ga0495604_0129447
391 Ga0495604_0355745
392 Ga0495674_0008174
393 Ga0495674_0009803
394 Ga0495674_0050068
395 Ga0495674_0206329
396 Ga0495680_0084876
397 Ga0495675_0002119
398 Ga0495675_0050361
399 Ga0495675_0171145
400 Ga0495684_0010786
401 Ga0495684_0077768
402 Ga0495602_0005701
403 Ga0495602_0040871
404 Ga0495602_0048881
405 Ga0496102_0007643
406 Ga0496103_0036932
407 Ga0496110_0026200
408 Ga0496111_0000980
409 Ga0496115_0005341
410 nmdc:mga05p37_588200_c1
411 nmdc:mga06r32_5540_c1
412 nmdc:mga0n895_165262_c1
413 nmdc:mga0n895_174391_c1
414 nmdc:mga0n895_351879_c1
415 nmdc:mga0n895_6212_c1
416 nmdc:mga0rr50_251775_c1
417 nmdc:mga0rr50_369162_c1
418 nmdc:mga08x19_21985_c1
419 nmdc:mga08x19_6578_c1
420 Ga0495601_0173296

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09163

Form-deh_trans

Formate dehydrogenase N, transmembrane

247

289

0.97

PF12838

Fer4_7

4Fe-4S dicluster domain

37

116

0.95

PF13247

Fer4_11

4Fe-4S dicluster domain

91

189

0.95

PF13237

Fer4_10

4Fe-4S dicluster domain

92

144

0.93

PF12837

Fer4_6

4Fe-4S binding domain

125

148

0.92

PF00037

Fer4

4Fe-4S binding domain

126

149

0.86

PF13187

Fer4_9

4Fe-4S dicluster domain

37

118

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mz9-assembly1.cif.gz_C revised structure of e. coli ssb 0.7829 79 97
6pkh-assembly1.cif.gz_A-2 zebrafish n-acetylglucosamine-1-phosphodiester alpha-n-acetylglucosaminidase (nagpa) catalytic domain auto-inhibited by pro-peptide 0.7665 79 95
1kqf-assembly1.cif.gz_B formate dehydrogenase n from e. coli 0.7632 6 289
1h0h-assembly2.cif.gz_L tungsten containing formate dehydrogenase from desulfovibrio gigas 0.7589 29 239
6pki-assembly1.cif.gz_A zebrafish n-acetylglucosamine-1-phosphodiester alpha-n-acetylglucosaminidase (nagpa) catalytic domain (c56s c230s) in complex with n-acetyl-alpha-d-glucosamine (alpha-glcnac) and mannose 6-phosphate (m6p) 0.7505 79 95
ID Description Score Start End Superfamily
af_Q8ID12_1426_1652_1.20.58.1930 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.8749 79 98 1.20.58.1930
2wybB02 Mainly Beta;Roll;Penicillin G acylase, beta-roll domain;Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.8182 79 96 2.30.120.10
4yf9I02 Mainly Beta;Roll;Penicillin G acylase, beta-roll domain;Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.7978 79 96 2.30.120.10
af_Q54B43_1_147_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.7742 79 95 2.30.29.30
af_Q9Y7K7_47_184_1.20.1280.290 Mainly Alpha;Up-down Bundle;Monooxygenase; 0.7735 79 97 1.20.1280.290
ID Description Score Start End GO Terms
AF-A0A378EHB2-F1-model_v4 deleted 0.8292 101 256
AF-A0A316XKB8-F1-model_v4 deleted 0.8222 84 247
AF-A0A377D430-F1-model_v4 Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit 0.8202 176 283 GO:0046872
GO:0051539
AF-A0A378EHB2-F1-model_v4 deleted 0.8198 101 256
AF-A0A316XKB8-F1-model_v4 deleted 0.8178 84 247

Map