F318851

General Info

Members Datasets Scaffolds Average Seq Length
209 115 418 683

Family's Representative Sequence

Representative Sequence 3300005544|Ga0070686_100001133|Ga0070686_10000113310
Length 710
Sequence MLISYNWLRELTGTTLTPLELRERLTMVGLAIDAVEEIEGDSVLDVEVPSNRPDCLSHVGIAREVSVISKSKVQSPKSKVVTTEGKAGDFSAVEIDDSDLCPRYAARVVRGVKIAPSPEWLTKRLGEIGQRPINNVADITNYVLHELGQPLHAFDLAKLAEQRIVVRRARAGEKLQTLDDVERKLDQEMLVIADAVQPVALAGIMGGLDSEISATTTDVLIESAYFNPDSVRRTARKLGMDTEASRRFERGADCENVIKAQTRCIELICEIAGGVATEDALDVYPNPLAPRSVVFHPARVESLTSLRVELDEMTRILEALGFVQSDQGTSPSESDGAESGPRTFVVPSWRIDVGIEEDLVEEIARHTGYDQIASELPPSNMAGEYQPSEMQRRDLRRAFRSLGFDEAINFSFVDPTHAEQFEVIPQLWVEALTGRLQGRSVDDLFVSLQNPILEGLTRMRPSLLPGLLASLRNNLNHGIRDVRLFEIGRVFANFTPGEPPAEREALTLLATGGALEEGRAQATHEIDFYELKGALETGVDATKLGPLSFSVADFKHLRVGQSAAISLADGTAIGSIGRLAESIAASYKFRQPVYVAEIDLTTLVASEPRSIQYAPLPRYPAVVRDVTLLLDRDVNFAALVEAIDAAGVADYRGATLVGTYEGEKIPENKRSVTLRVEYRSDERTLRDDEIEERHRGLIDLLVKQFCAQLH

Samples

Sample ID Description Type Environment
1 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
104 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
105 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
109 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
110 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
114 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
115 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.48
Rhizosphere 99.04
Stem 0
Stem Tuber 0
Unclassified 5.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070686_100001133 3300005544 Bacteria 15326
2 CNAas_1000026 3300000532 Bacteria 9657
3 JGI24751J29686_10000017 3300002459 Bacteria 109415
4 Ga0065714_10064596 3300005288 Bacteria 30781
5 Ga0065712_10068446 3300005290 Bacteria 10594
6 Ga0065712_10073588 3300005290 Bacteria 4340
7 Ga0065715_10013809 3300005293 Bacteria 3268
8 Ga0065715_10089589 3300005293 Bacteria 9352
9 Ga0065715_10096811 3300005293 Bacteria 3814
10 Ga0070690_100017532 3300005330 Bacteria 4309
11 Ga0070690_100057486 3300005330 Bacteria 2496
12 Ga0070670_100002554 3300005331 Bacteria 15028
13 Ga0070670_100018951 3300005331 Bacteria 5901
14 Ga0070670_100116911 3300005331 Bacteria 2300
15 Ga0070666_10012919 3300005335 Bacteria 5283
16 Ga0070680_100003222 3300005336 Bacteria 12146
17 Ga0070682_100000088 3300005337 Bacteria 83442
18 Ga0068868_100045354 3300005338 Bacteria 3439
19 Ga0070669_100001947 3300005353 Bacteria 14905
20 Ga0070669_100008114 3300005353 Bacteria 7501
21 Ga0070669_100011425 3300005353 Bacteria 6303
22 Ga0070671_100001256 3300005355 Bacteria 19009
23 Ga0070673_100004450 3300005364 Bacteria 8859
24 Ga0070659_100015215 3300005366 Bacteria 5758
25 Ga0070703_10001368 3300005406 Bacteria 7405
26 Ga0070700_100000106 3300005441 Bacteria 53028
27 Ga0070700_100008091 3300005441 Bacteria 5714
28 Ga0070694_100017025 3300005444 Bacteria 4587
29 Ga0070708_100001683 3300005445 Bacteria 16984
30 Ga0070708_100045197 3300005445 Bacteria 3878
31 Ga0070681_10000417 3300005458 Bacteria 34518
32 Ga0070681_10012002 3300005458 Bacteria 8588
33 Ga0070681_10102428 3300005458 Bacteria 2808
34 Ga0070706_100000088 3300005467 Bacteria 107818
35 Ga0070706_100002494 3300005467 Bacteria 18540
36 Ga0070706_100003757 3300005467 Bacteria 14826
37 Ga0070706_100010028 3300005467 Bacteria 8797
38 Ga0070706_100060959 3300005467 Unclassified 3483
39 Ga0070707_100001325 3300005468 Bacteria 24376
40 Ga0070707_100014868 3300005468 Bacteria 7299
41 Ga0070707_100070878 3300005468 Bacteria 3357
42 Ga0070698_100022051 3300005471 Bacteria 6668
43 Ga0070698_100030847 3300005471 Bacteria 5558
44 Ga0070698_100039120 3300005471 Bacteria 4884
45 Ga0070698_100078648 3300005471 Bacteria 3296
46 Ga0070699_100003262 3300005518 Bacteria 14357
47 Ga0070699_100007628 3300005518 Bacteria 9407
48 Ga0070679_100000797 3300005530 Bacteria 27372
49 Ga0070679_100001091 3300005530 Bacteria 23751
50 Ga0070697_100000155 3300005536 Bacteria 55402
51 Ga0070697_100000205 3300005536 Bacteria 48600
52 Ga0070697_100080311 3300005536 Bacteria 2687
53 Ga0068853_100019123 3300005539 Bacteria 5675
54 Ga0068853_100047228 3300005539 Bacteria 3694
55 Ga0070696_100040232 3300005546 Bacteria 3227
56 Ga0070696_100050029 3300005546 Bacteria 2904
57 Ga0070693_100001027 3300005547 Bacteria 12460
58 Ga0070693_100048881 3300005547 Bacteria 2410
59 Ga0070704_100000638 3300005549 Bacteria 16925
60 Ga0070704_100011390 3300005549 Bacteria 5449
61 Ga0070664_100001593 3300005564 Bacteria 18144
62 Ga0068856_100013790 3300005614 Bacteria 7812
63 Ga0070702_100008168 3300005615 Bacteria 5056
64 Ga0070702_100017970 3300005615 Bacteria 3658
65 Ga0068859_100045857 3300005617 Bacteria 4390
66 Ga0068859_100055086 3300005617 Unclassified 4001
67 Ga0068859_100107883 3300005617 Bacteria 2845
68 Ga0068859_100117631 3300005617 Bacteria 2723
69 Ga0068859_100119558 3300005617 Bacteria 2701
70 Ga0068864_100005538 3300005618 Bacteria 10354
71 Ga0068864_100022558 3300005618 Bacteria 5278
72 Ga0068864_100056210 3300005618 Bacteria 3400
73 Ga0068861_100014138 3300005719 Bacteria 5598
74 Ga0068861_100018961 3300005719 Bacteria 4907
75 Ga0068861_100100545 3300005719 Unclassified 2298
76 Ga0068851_10002483 3300005834 Bacteria 8106
77 Ga0068860_100003829 3300005843 Bacteria 15471
78 Ga0068860_100142866 3300005843 Bacteria 2301
79 Ga0081539_10000043 3300005985 Bacteria 288108
80 Ga0081539_10005773 3300005985 Bacteria 12340
81 Ga0097621_100015419 3300006237 Bacteria 5749
82 Ga0097621_100098059 3300006237 Bacteria 2461
83 Ga0097621_100105468 3300006237 Unclassified 2376
84 Ga0068871_100006157 3300006358 Bacteria 8456
85 Ga0068871_100019128 3300006358 Bacteria 5225
86 Ga0075430_100003709 3300006846 Bacteria 12833
87 Ga0075433_10058232 3300006852 Bacteria 3379
88 Ga0075434_100034748 3300006871 Bacteria 4980
89 Ga0075434_100130512 3300006871 Bacteria 2531
90 Ga0075436_100004844 3300006914 Bacteria 9249
91 Ga0097620_100045855 3300006931 Bacteria 4390
92 Ga0097620_100055085 3300006931 Unclassified 4001
93 Ga0097620_100107886 3300006931 Bacteria 2845
94 Ga0097620_100117636 3300006931 Bacteria 2723
95 Ga0097620_100119551 3300006931 Bacteria 2701
96 Ga0111539_10034502 3300009094 Bacteria 6134
97 Ga0114129_10005476 3300009147 Bacteria 17944
98 Ga0114129_10012624 3300009147 Bacteria 12026
99 Ga0114129_10061753 3300009147 Bacteria 5237
100 Ga0114129_10090358 3300009147 Bacteria 4245
101 Ga0105248_10018386 3300009177 Bacteria 7722
102 Ga0105248_10062642 3300009177 Bacteria 4176
103 Ga0105237_10000438 3300009545 Bacteria 59334
104 Ga0105237_10056051 3300009545 Unclassified 3946
105 Ga0105238_10030053 3300009551 Bacteria 5529
106 Ga0105238_10042085 3300009551 Bacteria 4626
107 Ga0105249_10000028 3300009553 Bacteria 230039
108 Ga0105249_10020461 3300009553 Bacteria 5916
109 Ga0157378_10008355 3300013297 Bacteria 9017
110 Ga0163162_10000027 3300013306 Bacteria 178451
111 Ga0163162_10001819 3300013306 Bacteria 20050
112 Ga0163162_10011778 3300013306 Bacteria 8530
113 Ga0163162_10013469 3300013306 Bacteria 7982
114 Ga0163162_10025055 3300013306 Bacteria 5894
115 Ga0163162_10090631 3300013306 Bacteria 3139
116 Ga0157372_10022333 3300013307 Bacteria 6845
117 Ga0157372_10067477 3300013307 Bacteria 4019
118 Ga0157375_10061224 3300013308 Bacteria 3736
119 Ga0157375_10069840 3300013308 Bacteria 3520
120 Ga0163163_10000953 3300014325 Bacteria 24583
121 Ga0163163_10023334 3300014325 Bacteria 5869
122 Ga0163163_10023744 3300014325 Bacteria 5825
123 Ga0163163_10028121 3300014325 Bacteria 5395
124 Ga0157380_10001451 3300014326 Bacteria 15515
125 Ga0157380_10002205 3300014326 Bacteria 13098
126 Ga0157380_10005911 3300014326 Bacteria 8559
127 Ga0157380_10015917 3300014326 Bacteria 5534
128 Ga0157380_10024802 3300014326 Bacteria 4543
129 Ga0163161_10025611 3300017792 Bacteria 4176
130 Ga0207697_10006150 3300025315 Bacteria 5478
131 Ga0207656_10020591 3300025321 Bacteria 2624
132 Ga0207653_10000948 3300025885 Bacteria 9584
133 Ga0207647_10001815 3300025904 Bacteria 16384
134 Ga0207643_10009763 3300025908 Bacteria 5151
135 Ga0207684_10000170 3300025910 Bacteria 107800
136 Ga0207684_10019633 3300025910 Bacteria 5781
137 Ga0207707_10000015 3300025912 Bacteria 259670
138 Ga0207707_10015435 3300025912 Bacteria 6653
139 Ga0207671_10000958 3300025914 Bacteria 35832
140 Ga0207660_10001103 3300025917 Bacteria 18024
141 Ga0207652_10000252 3300025921 Bacteria 55772
142 Ga0207652_10084978 3300025921 Bacteria 2773
143 Ga0207646_10063422 3300025922 Bacteria 3299
144 Ga0207646_10099652 3300025922 Bacteria 2604
145 Ga0207681_10005772 3300025923 Bacteria 7591
146 Ga0207681_10006488 3300025923 Bacteria 7181
147 Ga0207694_10004960 3300025924 Bacteria 10306
148 Ga0207650_10000005 3300025925 Bacteria 663190
149 Ga0207650_10001694 3300025925 Bacteria 15668
150 Ga0207650_10047533 3300025925 Bacteria 3162
151 Ga0207650_10082993 3300025925 Bacteria 2434
152 Ga0207686_10019085 3300025934 Bacteria 3893
153 Ga0207711_10004919 3300025941 Bacteria 11344
154 Ga0207711_10102165 3300025941 Bacteria 2538
155 Ga0207689_10004566 3300025942 Bacteria 12534
156 Ga0207689_10031044 3300025942 Bacteria 4451
157 Ga0207689_10048131 3300025942 Bacteria 3517
158 Ga0207689_10108222 3300025942 Bacteria 2284
159 Ga0207679_10007735 3300025945 Bacteria 6829
160 Ga0207651_10012707 3300025960 Unclassified 4779
161 Ga0207712_10000110 3300025961 Bacteria 89234
162 Ga0207677_10030542 3300026023 Bacteria 3441
163 Ga0207703_10030675 3300026035 Bacteria 4249
164 Ga0207639_10022288 3300026041 Unclassified 4561
165 Ga0207708_10000043 3300026075 Bacteria 121725
166 Ga0207708_10008562 3300026075 Bacteria 7569
167 Ga0207708_10060182 3300026075 Bacteria 2899
168 Ga0207708_10079564 3300026075 Bacteria 2518
169 Ga0207676_10005890 3300026095 Bacteria 8655
170 Ga0207676_10008806 3300026095 Bacteria 7183
171 Ga0207674_10005214 3300026116 Bacteria 15471
172 Ga0207675_100002789 3300026118 Bacteria 17170
173 Ga0207675_100019390 3300026118 Bacteria 6345
174 Ga0207675_100022919 3300026118 Bacteria 5808
175 Ga0207675_100147707 3300026118 Unclassified 2236
176 Ga0268265_10017259 3300028380 Unclassified 4978
177 Ga0268264_10043770 3300028381 Bacteria 3712
178 Ga0307408_100034088 3300031548 Bacteria 3562
179 Ga0307405_10010901 3300031731 Bacteria 4737
180 Ga0307413_10000932 3300031824 Bacteria 10422
181 Ga0307410_10003013 3300031852 Bacteria 8313
182 Ga0307410_10068859 3300031852 Bacteria 2446
183 Ga0307406_10033220 3300031901 Bacteria 3156
184 Ga0307407_10021815 3300031903 Bacteria 3310
185 Ga0307412_10005846 3300031911 Bacteria 6923
186 Ga0307416_100010159 3300032002 Bacteria 6204
187 Ga0307414_10027496 3300032004 Bacteria 3677
188 Ga0307411_10002733 3300032005 Bacteria 7920
189 Ga0307415_100007489 3300032126 Bacteria 5974
190 Ga0436365_0059717 3300039437 Bacteria 3135
191 Ga0451576_0081072 3300045051 Bacteria 3375
192 Ga0495663_0000477 3300046525 Bacteria 14578
193 Ga0495598_0000801 3300046537 Bacteria 6006
194 Ga0495621_0004449 3300046539 Bacteria 3942
195 Ga0496113_0046868 3300048916 Bacteria 3211
196 Ga0501038_0002264 3300049574 Bacteria 17906
197 Ga0501217_002716 3300049661 Unclassified 3509
198 Ga0501233_001382 3300049668 Bacteria 4150
199 Ga0501234_000103 3300049707 Bacteria 10792
200 nmdc:mga05p37_1550_c1 3300050507 Bacteria 26715
201 nmdc:mga08y16_14198_c1 3300050511 Bacteria 8381
202 nmdc:mga0n895_22555_c1 3300050512 Bacteria 5904
203 nmdc:mga0n895_86157_c1 3300050512 Bacteria 3137
204 nmdc:mga0n895_86383_c1 3300050512 Bacteria 3133
205 nmdc:mga08x19_1934_c1 3300050514 Bacteria 4074
206 nmdc:mga0a205_53600_c1 3300050515 Bacteria 3893
207 nmdc:mga0a205_5706_c1 3300050515 Bacteria 11216
208 nmdc:mga0a205_59159_c1 3300050515 Bacteria 3702
209 nmdc:mga0a205_9217_c1 3300050515 Bacteria 9010
210 Ga0070686_100001133
211 CNAas_1000026
212 JGI24751J29686_10000017
213 Ga0065714_10064596
214 Ga0065712_10068446
215 Ga0065712_10073588
216 Ga0065715_10013809
217 Ga0065715_10089589
218 Ga0065715_10096811
219 Ga0070690_100017532
220 Ga0070690_100057486
221 Ga0070670_100002554
222 Ga0070670_100018951
223 Ga0070670_100116911
224 Ga0070666_10012919
225 Ga0070680_100003222
226 Ga0070682_100000088
227 Ga0068868_100045354
228 Ga0070669_100001947
229 Ga0070669_100008114
230 Ga0070669_100011425
231 Ga0070671_100001256
232 Ga0070673_100004450
233 Ga0070659_100015215
234 Ga0070703_10001368
235 Ga0070700_100000106
236 Ga0070700_100008091
237 Ga0070694_100017025
238 Ga0070708_100001683
239 Ga0070708_100045197
240 Ga0070681_10000417
241 Ga0070681_10012002
242 Ga0070681_10102428
243 Ga0070706_100000088
244 Ga0070706_100002494
245 Ga0070706_100003757
246 Ga0070706_100010028
247 Ga0070706_100060959
248 Ga0070707_100001325
249 Ga0070707_100014868
250 Ga0070707_100070878
251 Ga0070698_100022051
252 Ga0070698_100030847
253 Ga0070698_100039120
254 Ga0070698_100078648
255 Ga0070699_100003262
256 Ga0070699_100007628
257 Ga0070679_100000797
258 Ga0070679_100001091
259 Ga0070697_100000155
260 Ga0070697_100000205
261 Ga0070697_100080311
262 Ga0068853_100019123
263 Ga0068853_100047228
264 Ga0070696_100040232
265 Ga0070696_100050029
266 Ga0070693_100001027
267 Ga0070693_100048881
268 Ga0070704_100000638
269 Ga0070704_100011390
270 Ga0070664_100001593
271 Ga0068856_100013790
272 Ga0070702_100008168
273 Ga0070702_100017970
274 Ga0068859_100045857
275 Ga0068859_100055086
276 Ga0068859_100107883
277 Ga0068859_100117631
278 Ga0068859_100119558
279 Ga0068864_100005538
280 Ga0068864_100022558
281 Ga0068864_100056210
282 Ga0068861_100014138
283 Ga0068861_100018961
284 Ga0068861_100100545
285 Ga0068851_10002483
286 Ga0068860_100003829
287 Ga0068860_100142866
288 Ga0081539_10000043
289 Ga0081539_10005773
290 Ga0097621_100015419
291 Ga0097621_100098059
292 Ga0097621_100105468
293 Ga0068871_100006157
294 Ga0068871_100019128
295 Ga0075430_100003709
296 Ga0075433_10058232
297 Ga0075434_100034748
298 Ga0075434_100130512
299 Ga0075436_100004844
300 Ga0097620_100045855
301 Ga0097620_100055085
302 Ga0097620_100107886
303 Ga0097620_100117636
304 Ga0097620_100119551
305 Ga0111539_10034502
306 Ga0114129_10005476
307 Ga0114129_10012624
308 Ga0114129_10061753
309 Ga0114129_10090358
310 Ga0105248_10018386
311 Ga0105248_10062642
312 Ga0105237_10000438
313 Ga0105237_10056051
314 Ga0105238_10030053
315 Ga0105238_10042085
316 Ga0105249_10000028
317 Ga0105249_10020461
318 Ga0157378_10008355
319 Ga0163162_10000027
320 Ga0163162_10001819
321 Ga0163162_10011778
322 Ga0163162_10013469
323 Ga0163162_10025055
324 Ga0163162_10090631
325 Ga0157372_10022333
326 Ga0157372_10067477
327 Ga0157375_10061224
328 Ga0157375_10069840
329 Ga0163163_10000953
330 Ga0163163_10023334
331 Ga0163163_10023744
332 Ga0163163_10028121
333 Ga0157380_10001451
334 Ga0157380_10002205
335 Ga0157380_10005911
336 Ga0157380_10015917
337 Ga0157380_10024802
338 Ga0163161_10025611
339 Ga0207697_10006150
340 Ga0207656_10020591
341 Ga0207653_10000948
342 Ga0207647_10001815
343 Ga0207643_10009763
344 Ga0207684_10000170
345 Ga0207684_10019633
346 Ga0207707_10000015
347 Ga0207707_10015435
348 Ga0207671_10000958
349 Ga0207660_10001103
350 Ga0207652_10000252
351 Ga0207652_10084978
352 Ga0207646_10063422
353 Ga0207646_10099652
354 Ga0207681_10005772
355 Ga0207681_10006488
356 Ga0207694_10004960
357 Ga0207650_10000005
358 Ga0207650_10001694
359 Ga0207650_10047533
360 Ga0207650_10082993
361 Ga0207686_10019085
362 Ga0207711_10004919
363 Ga0207711_10102165
364 Ga0207689_10004566
365 Ga0207689_10031044
366 Ga0207689_10048131
367 Ga0207689_10108222
368 Ga0207679_10007735
369 Ga0207651_10012707
370 Ga0207712_10000110
371 Ga0207677_10030542
372 Ga0207703_10030675
373 Ga0207639_10022288
374 Ga0207708_10000043
375 Ga0207708_10008562
376 Ga0207708_10060182
377 Ga0207708_10079564
378 Ga0207676_10005890
379 Ga0207676_10008806
380 Ga0207674_10005214
381 Ga0207675_100002789
382 Ga0207675_100019390
383 Ga0207675_100022919
384 Ga0207675_100147707
385 Ga0268265_10017259
386 Ga0268264_10043770
387 Ga0307408_100034088
388 Ga0307405_10010901
389 Ga0307413_10000932
390 Ga0307410_10003013
391 Ga0307410_10068859
392 Ga0307406_10033220
393 Ga0307407_10021815
394 Ga0307412_10005846
395 Ga0307416_100010159
396 Ga0307414_10027496
397 Ga0307411_10002733
398 Ga0307415_100007489
399 Ga0436365_0059717
400 Ga0451576_0081072
401 Ga0495663_0000477
402 Ga0495598_0000801
403 Ga0495621_0004449
404 Ga0496113_0046868
405 Ga0501038_0002264
406 Ga0501217_002716
407 Ga0501233_001382
408 Ga0501234_000103
409 nmdc:mga05p37_1550_c1
410 nmdc:mga08y16_14198_c1
411 nmdc:mga0n895_22555_c1
412 nmdc:mga0n895_86157_c1
413 nmdc:mga0n895_86383_c1
414 nmdc:mga08x19_1934_c1
415 nmdc:mga0a205_53600_c1
416 nmdc:mga0a205_5706_c1
417 nmdc:mga0a205_59159_c1
418 nmdc:mga0a205_9217_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03483

B3_4

B3/4 domain

100

273

0.99

PF03147

FDX-ACB

Ferredoxin-fold anticodon binding domain

617

710

0.98

PF17759

tRNA_synthFbeta

Phenylalanyl tRNA synthetase beta chain CLM domain

372

600

0.95

PF03484

B5

tRNA synthetase B5 domain

293

369

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ica-assembly1.cif.gz_A the crystal structure of the beta subunit of a phenylalanyl-trna synthetase from porphyromonas gingivalis w83 0.823 369 568
3ig2-assembly3.cif.gz_C-2 the crystal structure of a putative phenylalanyl-trna synthetase (phers) beta chain domain from bacteroides fragilis to 2.1a 0.8049 369 568
6ezd-assembly2.cif.gz_D pyrrolysyl-trna synthetase from canditatus methanomethylophilus alvus (mmapylrs) 0.8035 369 570
3vqx-assembly2.cif.gz_D crystal structure of the catalytic domain of pyrrolysyl-trna synthetase in triclinic crystal form 0.7941 370 568
6ezd-assembly1.cif.gz_C pyrrolysyl-trna synthetase from canditatus methanomethylophilus alvus (mmapylrs) 0.794 369 570
ID Description Score Start End Superfamily
af_Q2FZD8_204_404_3.50.40.10 Alpha Beta;3-Layer(bba) Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 3;Phenylalanyl-trna Synthetase, Chain B, domain 3 0.9823 84 283 3.50.40.10
af_Q2FZD8_204_404_3.50.40.10 Alpha Beta;3-Layer(bba) Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 3;Phenylalanyl-trna Synthetase, Chain B, domain 3 0.9727 84 283 3.50.40.10
af_P9WFU1_211_407_3.50.40.10 Alpha Beta;3-Layer(bba) Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 3;Phenylalanyl-trna Synthetase, Chain B, domain 3 0.9635 90 284 3.50.40.10
2rhqB01 Alpha Beta;2-Layer Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 1; 0.952 1 66 3.30.56.10
af_P9WFU1_211_407_3.50.40.10 Alpha Beta;3-Layer(bba) Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 3;Phenylalanyl-trna Synthetase, Chain B, domain 3 0.9492 90 284 3.50.40.10
ID Description Score Start End GO Terms
AF-A0A5T0UQL8-F1-model_v4 Phenylalanine--tRNA ligase subunit beta 0.9883 112 215 GO:0003723
GO:0004826
AF-A0A7C1EFI1-F1-model_v4 Phenylalanine--tRNA ligase subunit beta 0.9866 1 253 GO:0003723
GO:0004826
GO:0006432
GO:0009328
AF-X1UXD3-F1-model_v4 B3/B4 tRNA-binding domain-containing protein 0.9847 40 278 GO:0003723
GO:0004826
GO:0006432
GO:0009328
AF-A0A527GL99-F1-model_v4 Phenylalanine--tRNA ligase subunit beta 0.984 131 253 GO:0003723
GO:0004826
AF-A0A381T1Z4-F1-model_v4 B3/B4 tRNA-binding domain-containing protein 0.981 1 289 GO:0003723
GO:0004826
GO:0006432
GO:0009328

Map