F318497

General Info

Members Datasets Scaffolds Average Seq Length
208 176 162 343

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862993130|2862996434
Length 366
Sequence HGARDVVSAGQSARSVAVPVSASQETSVSPGLGVIAPDRFENPGIPPHQPRVTDLDPKKEKRAERTVYTLFYLSLAGSVFAIAAYFGFPIEENNIASTRMNNLMIGIGISLALLAIGIAAVHWGKALMPEEEMIDHRHPVIGSPATRARAVEIFDQANKESGLGRRSLLRNSLIGALVAFPLPAIVLFRDLYPGNQEDPVSALSHTMWKEGVRLTRDPSGTPIRASEVTLGSAFHVIPEGLDESEHYLEEKAKAAVLLMRLRPDELNEIEERKSWSYDGIVAYSKICTHVGCPVALYEQITHHLLCPCHQSQFDVTNHCEVIFGPAARPLPQLPIAVDDEGYLIAQSDFTEPVGPSFWERASVNDN

Samples

Sample ID Description Type Environment
1 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
2 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
3 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
4 2643221549 Agromyces sp. Root1464 Isolate Unclassified
5 2643221553 Microbacterium sp. Root553 Isolate Unclassified
6 2643221572 Leifsonia sp. Root60 Isolate Unclassified
7 2643221575 Microbacterium sp. Root61 Isolate Unclassified
8 2643221619 Agromyces sp. Root81 Isolate Unclassified
9 2643221649 Leifsonia sp. Root4 Isolate Unclassified
10 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
11 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
12 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
13 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
14 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
15 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
16 2739367653 Kocuria sp. OV113 Isolate Unclassified
17 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
18 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
19 2808606372 Agromyces sp. 23-23 Isolate Unclassified
20 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
21 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
22 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
23 2857727296 Kocuria sp. R-72562 Isolate Unclassified
24 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
25 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
26 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
27 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
28 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
29 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
30 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
31 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
32 2919069694 Microbacterium sp. 1154 Isolate Unclassified
33 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
34 2920879853 Kocuria salina CV6 Isolate Unclassified
35 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
36 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
37 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
38 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
39 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
40 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
41 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
42 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
43 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
44 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
45 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
46 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
47 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
48 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
49 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
50 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
51 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
52 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
53 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
54 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
55 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
56 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
57 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
58 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
59 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
60 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
61 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
62 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
63 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
68 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
76 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
97 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
98 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
104 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
107 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
108 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
115 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
116 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
117 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
118 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
119 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
120 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300049160 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
143 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
145 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
146 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
147 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
148 3300049535 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
168 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
169 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
170 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
173 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
176 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 64.9
Metatranscriptomes 12.98
Isolates 22.12

Biome Distribution

Category Percentage (%)
Aerial Root 0.48
Bulb 0
Endosphere 5.77
Nodule 0
Rhizoplane 9.13
Rhizosphere 65.38
Stem 0
Stem Tuber 0
Unclassified 19.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10008054 3300001979 Bacteria 4233
2 JGI25154J39366_1002087 3300002738 Bacteria 5658
3 Ga0065714_10071915 3300005288 Bacteria 3467
4 Ga0065712_10075215 3300005290 Bacteria 3880
5 Ga0070658_10076165 3300005327 Bacteria 2752
6 Ga0070676_10015242 3300005328 Bacteria 4239
7 Ga0070670_100018072 3300005331 Bacteria 6052
8 Ga0070669_100039312 3300005353 Bacteria 3437
9 Ga0070675_100228738 3300005354 Bacteria 1622
10 Ga0070671_100039605 3300005355 Bacteria 3912
11 Ga0070667_100036796 3300005367 Bacteria 4104
12 Ga0070663_100290866 3300005455 Bacteria 1305
13 Ga0070684_100390093 3300005535 Bacteria 1283
14 Ga0070672_100025463 3300005543 Bacteria 4388
15 Ga0068862_100244147 3300005844 Bacteria 1634
16 Ga0075365_10017575 3300006038 Bacteria 4379
17 Ga0075364_10000664 3300006051 Bacteria 17846
18 Ga0105251_10007608 3300009011 Bacteria 6639
19 Ga0105244_10017534 3300009036 Bacteria 4043
20 Ga0105243_10037295 3300009148 Bacteria 3777
21 Ga0105248_10149706 3300009177 Bacteria 2633
22 Ga0105249_10163790 3300009553 Bacteria 2151
23 Ga0105246_10045476 3300011119 Bacteria 2989
24 Ga0157371_10056669 3300013102 Bacteria 2780
25 Ga0157370_10052646 3300013104 Bacteria 3886
26 Ga0157369_10021407 3300013105 Bacteria 7233
27 Ga0157369_10226924 3300013105 Bacteria 1954
28 Ga0163162_10011086 3300013306 Bacteria 8782
29 Ga0163162_10058408 3300013306 Bacteria 3886
30 Ga0163162_10077669 3300013306 Bacteria 3384
31 Ga0163162_10298437 3300013306 Bacteria 1743
32 Ga0197907_11125962 3300020069 Bacteria 2812
33 Ga0206350_10993430 3300020080 Bacteria 1877
34 Ga0224712_10006014 3300022467 Bacteria 3429
35 Ga0209646_1000071 3300025246 Bacteria 228702
36 Ga0207655_1004207 3300025728 Bacteria 10319
37 Ga0207705_10031366 3300025909 Bacteria 3793
38 Ga0207681_10073848 3300025923 Bacteria 2387
39 Ga0207650_10005278 3300025925 Bacteria 8812
40 Ga0207659_10045776 3300025926 Bacteria 3087
41 Ga0207659_10067253 3300025926 Bacteria 2602
42 Ga0207644_10018176 3300025931 Bacteria 4755
43 Ga0207691_10001644 3300025940 Bacteria 22170
44 Ga0207667_10404968 3300025949 Bacteria 1389
45 Ga0207675_100025236 3300026118 Bacteria 5532
46 Ga0207683_10029792 3300026121 Bacteria 4726
47 Ga0207698_10101126 3300026142 Bacteria 2390
48 Ga0268265_10269051 3300028380 Bacteria 1519
49 Ga0307515_10065688 3300028794 Bacteria 5043
50 Ga0307514_10016061 3300031649 Bacteria 6169
51 Ga0307405_10094133 3300031731 Bacteria 1992
52 Ga0307413_10144708 3300031824 Bacteria 1648
53 Ga0307410_10007595 3300031852 Bacteria 5949
54 Ga0307410_10073601 3300031852 Bacteria 2376
55 Ga0307406_10181551 3300031901 Bacteria 1532
56 Ga0307409_100010681 3300031995 Bacteria 5730
57 Ga0307416_100021530 3300032002 Bacteria 4631
58 Ga0451797_0789979 3300041453 Bacteria 2925
59 Ga0451833_0581733 3300041491 Bacteria 1687
60 Ga0466970_0000004 3300044765 Bacteria 108620
61 Ga0466960_0087880 3300044901 Bacteria 1579
62 Ga0466967_0393042 3300045976 Bacteria 1348
63 Ga0495653_0003711 3300046463 Bacteria 12347
64 Ga0495582_0165570 3300046473 Bacteria 1258
65 Ga0495639_0003532 3300046475 Bacteria 6749
66 Ga0495662_0076740 3300046476 Bacteria 1623
67 Ga0495664_0036238 3300046477 Bacteria 2907
68 Ga0495594_0110301 3300046499 Bacteria 1551
69 Ga0495654_0033080 3300046530 Bacteria 2618
70 Ga0495665_0000442 3300046531 Bacteria 20962
71 Ga0495665_0033432 3300046531 Bacteria 2750
72 Ga0495586_0001309 3300046535 Bacteria 13842
73 Ga0495587_0004388 3300046536 Bacteria 9302
74 Ga0495645_0000314 3300046543 Bacteria 34802
75 Ga0495667_0000209 3300046559 Bacteria 39226
76 Ga0495625_0060683 3300046660 Bacteria 2679
77 Ga0495588_0008840 3300046674 Bacteria 4632
78 Ga0495588_0023674 3300046674 Bacteria 3042
79 Ga0495588_0055537 3300046674 Bacteria 2043
80 Ga0495657_0161625 3300046675 Bacteria 1385
81 Ga0495600_0006815 3300046809 Bacteria 6965
82 Ga0495581_0007490 3300047315 Bacteria 6312
83 Ga0495581_0208730 3300047315 Bacteria 1142
84 Ga0495675_0000831 3300047444 Bacteria 18898
85 Ga0495677_0031255 3300047445 Bacteria 1938
86 Ga0495593_0020274 3300047673 Bacteria 3724
87 Ga0496100_0022647 3300048903 Bacteria 3803
88 Ga0496100_0065952 3300048903 Bacteria 2400
89 Ga0496102_0010389 3300048905 Bacteria 8011
90 Ga0496102_0142706 3300048905 Bacteria 2246
91 Ga0496103_0007232 3300048906 Bacteria 6617
92 Ga0496103_0069555 3300048906 Bacteria 2200
93 Ga0496105_0201914 3300048908 Bacteria 1622
94 Ga0496106_0035552 3300048909 Bacteria 3725
95 Ga0496106_0235463 3300048909 Bacteria 1462
96 Ga0496108_0170561 3300048911 Bacteria 1882
97 Ga0496109_0133940 3300048912 Bacteria 2314
98 Ga0496110_0056420 3300048913 Bacteria 3456
99 Ga0496111_0043827 3300048914 Bacteria 3216
100 Ga0496111_0052210 3300048914 Bacteria 2951
101 Ga0496112_0107606 3300048915 Bacteria 2758
102 Ga0496113_0202818 3300048916 Bacteria 1576
103 Ga0496114_0029867 3300048917 Bacteria 4481
104 Ga0496114_0090382 3300048917 Bacteria 2599
105 Ga0496119_0022129 3300048922 Bacteria 4565
106 Ga0496119_0033664 3300048922 Bacteria 3392
107 Ga0496121_0262448 3300048924 Bacteria 1192
108 Ga0496124_0102914 3300048927 Bacteria 2310
109 Ga0496125_0071307 3300048928 Bacteria 2715
110 Ga0496126_0075463 3300048929 Bacteria 2992
111 Ga0496126_0149811 3300048929 Bacteria 2000
112 Ga0501309_003160 3300049129 Bacteria 1845
113 Ga0501304_000121 3300049160 Bacteria 3065
114 Ga0501304_002325 3300049160 Bacteria 1311
115 Ga0501305_000236 3300049161 Bacteria 4046
116 Ga0501311_000185 3300049527 Bacteria 3606
117 Ga0501312_000172 3300049528 Bacteria 4330
118 Ga0501314_000191 3300049530 Bacteria 3327
119 Ga0501315_000602 3300049531 Bacteria 2599
120 Ga0501316_000097 3300049532 Bacteria 4342
121 Ga0501317_000110 3300049533 Bacteria 4332
122 Ga0501317_000533 3300049533 Bacteria 2754
123 Ga0501318_000068 3300049534 Bacteria 4330
124 Ga0501318_000078 3300049534 Bacteria 4151
125 Ga0501318_004803 3300049534 Bacteria 1313
126 Ga0501318_006743 3300049534 Bacteria 1180
127 Ga0501319_000049 3300049535 Bacteria 3907
128 Ga0501320_000083 3300049536 Bacteria 4245
129 Ga0501321_000082 3300049537 Bacteria 4330
130 Ga0501321_000400 3300049537 Bacteria 2722
131 Ga0501321_002284 3300049537 Bacteria 1644
132 Ga0501321_005619 3300049537 Bacteria 1247
133 Ga0501323_000133 3300049539 Bacteria 4284
134 Ga0501324_000173 3300049540 Bacteria 2895
135 Ga0501325_000135 3300049541 Bacteria 2665
136 Ga0501033_0301228 3300049570 Bacteria 1128
137 Ga0501034_0000227 3300049571 Bacteria 106244
138 Ga0501034_0038369 3300049571 Bacteria 4850
139 Ga0501036_0082425 3300049572 Bacteria 2718
140 Ga0501037_0111497 3300049573 Bacteria 1970
141 Ga0501038_0039539 3300049574 Bacteria 4125
142 Ga0501043_0381191 3300049579 Bacteria 1067
143 Ga0501046_0007016 3300049580 Bacteria 9925
144 Ga0501070_0055423 3300049586 Bacteria 3285
145 Ga0501072_0116858 3300049588 Bacteria 2125
146 Ga0501073_0009587 3300049589 Bacteria 7141
147 Ga0501074_0010738 3300049590 Bacteria 6654
148 Ga0501035_0074620 3300049822 Bacteria 3000
149 Ga0501035_0286977 3300049822 Bacteria 1389
150 Ga0501044_0069803 3300049823 Bacteria 3576
151 Ga0501044_0588591 3300049823 Bacteria 1006
152 nmdc:mga00v17_10485_c1 3300050491 Bacteria 5061
153 nmdc:mga0yw44_26395_c1 3300050492 Bacteria 3317
154 Ga0495655_0005118 3300053083 Bacteria 2295
155 Ga0500650_0003657 3300053098 Bacteria 5406
156 Ga0500559_0000102 3300053136 Bacteria 66427
157 Ga0500573_0000059 3300053140 Bacteria 71066
158 Ga0500573_0000382 3300053140 Bacteria 18743
159 Ga0500573_0056813 3300053140 Bacteria 2247
160 Ga0500577_0013527 3300053142 Bacteria 2495
161 Ga0500616_0000433 3300053153 Bacteria 55659
162 Ga0500616_0025549 3300053153 Bacteria 3275

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049533 Ga0501317_000533 Ga0501317_000533_1668_2603 278
2 3300046674 Ga0495588_0008840 Ga0495588_0008840_3644_4612 291
3 3300047315 Ga0495581_0208730 Ga0495581_0208730_43_1011 291
4 3300048906 Ga0496103_0069555 Ga0496103_0069555_1212_2180 291
5 3300048908 Ga0496105_0201914 Ga0496105_0201914_21_989 291
6 3300048909 Ga0496106_0235463 Ga0496106_0235463_474_1442 291
7 3300048916 Ga0496113_0202818 Ga0496113_0202818_10_978 291
8 iso_pu_bacteria 2857727296 2857728385 291
9 3300048917 Ga0496114_0090382 Ga0496114_0090382_58_1065 307
10 3300049537 Ga0501321_005619 Ga0501321_005619_211_1173 307
11 3300046473 Ga0495582_0165570 Ga0495582_0165570_31_1038 308
12 3300046475 Ga0495639_0003532 Ga0495639_0003532_2729_3736 308
13 3300046476 Ga0495662_0076740 Ga0495662_0076740_554_1561 308
14 3300046531 Ga0495665_0033432 Ga0495665_0033432_1730_2737 308
15 3300046674 Ga0495588_0023674 Ga0495588_0023674_1642_2649 308
16 3300047315 Ga0495581_0007490 Ga0495581_0007490_5242_6249 308
17 3300047673 Ga0495593_0020274 Ga0495593_0020274_1663_2670 308
18 3300049534 Ga0501318_006743 Ga0501318_006743_33_1061 309
19 iso_pu_bacteria 2977228692 2977231025 310
20 3300005844 Ga0068862_100244147 Ga0068862_1002441471 312
21 3300009553 Ga0105249_10163790 Ga0105249_101637902 312
22 3300025926 Ga0207659_10045776 Ga0207659_100457761 312
23 3300026118 Ga0207675_100025236 Ga0207675_1000252363 312
24 3300028380 Ga0268265_10269051 Ga0268265_102690511 312
25 3300048905 Ga0496102_0142706 Ga0496102_0142706_451_1527 312
26 3300049579 Ga0501043_0381191 Ga0501043_0381191_38_1018 313
27 3300049823 Ga0501044_0588591 Ga0501044_0588591_11_991 313
28 iso_pu_bacteria 2537561592 2537898161 318
29 3300005290 Ga0065712_10075215 Ga0065712_100752152 319
30 3300005328 Ga0070676_10015242 Ga0070676_100152422 319
31 3300005331 Ga0070670_100018072 Ga0070670_1000180728 319
32 3300005353 Ga0070669_100039312 Ga0070669_1000393123 319
33 3300005354 Ga0070675_100228738 Ga0070675_1002287382 319
34 3300005355 Ga0070671_100039605 Ga0070671_1000396053 319
35 3300005367 Ga0070667_100036796 Ga0070667_1000367962 319
36 3300005543 Ga0070672_100025463 Ga0070672_1000254634 319
37 3300009011 Ga0105251_10007608 Ga0105251_100076085 319
38 3300009036 Ga0105244_10017534 Ga0105244_100175342 319
39 3300009148 Ga0105243_10037295 Ga0105243_100372952 319
40 3300009177 Ga0105248_10149706 Ga0105248_101497062 319
41 3300011119 Ga0105246_10045476 Ga0105246_100454762 319
42 3300013105 Ga0157369_10226924 Ga0157369_102269242 319
43 3300013306 Ga0163162_10077669 Ga0163162_100776692 319
44 3300025728 Ga0207655_1004207 Ga0207655_10042072 319
45 3300025923 Ga0207681_10073848 Ga0207681_100738482 319
46 3300025925 Ga0207650_10005278 Ga0207650_100052782 319
47 3300025926 Ga0207659_10067253 Ga0207659_100672532 319
48 3300025931 Ga0207644_10018176 Ga0207644_100181764 319
49 3300025940 Ga0207691_10001644 Ga0207691_1000164415 319
50 3300026121 Ga0207683_10029792 Ga0207683_100297923 319
51 3300047445 Ga0495677_0031255 Ga0495677_0031255_108_1181 319
52 3300048903 Ga0496100_0065952 Ga0496100_0065952_1051_2124 319
53 3300048905 Ga0496102_0010389 Ga0496102_0010389_1324_2397 319
54 3300048911 Ga0496108_0170561 Ga0496108_0170561_248_1321 319
55 3300048912 Ga0496109_0133940 Ga0496109_0133940_841_1914 319
56 3300048913 Ga0496110_0056420 Ga0496110_0056420_1822_2895 319
57 3300048915 Ga0496112_0107606 Ga0496112_0107606_1438_2511 319
58 3300048917 Ga0496114_0029867 Ga0496114_0029867_1263_2336 319
59 3300048922 Ga0496119_0033664 Ga0496119_0033664_785_1858 319
60 3300048927 Ga0496124_0102914 Ga0496124_0102914_804_1877 319
61 3300048928 Ga0496125_0071307 Ga0496125_0071307_405_1478 319
62 iso_pu_bacteria 2643221690 2644503594 319
63 iso_pu_bacteria 2643221694 2644525874 319
64 iso_pu_bacteria 2643221722 2644669933 319
65 3300046660 Ga0495625_0060683 Ga0495625_0060683_1370_2446 320
66 3300026142 Ga0207698_10101126 Ga0207698_101011262 321
67 3300041491 Ga0451833_0581733 Ga0451833_0581733_271_1311 321
68 iso_pu_bacteria 2739367653 2739602327 321
69 iso_pu_bacteria 2816332305 2817509188 321
70 iso_pu_bacteria 2893684298 2893684649 321
71 iso_pu_bacteria 2920879853 2920881814 321
72 3300013306 Ga0163162_10058408 Ga0163162_100584083 322
73 3300031731 Ga0307405_10094133 Ga0307405_100941332 322
74 3300031852 Ga0307410_10007595 Ga0307410_100075956 322
75 3300031852 Ga0307410_10073601 Ga0307410_100736012 322
76 3300031995 Ga0307409_100010681 Ga0307409_1000106812 322
77 3300032002 Ga0307416_100021530 Ga0307416_1000215304 322
78 3300048903 Ga0496100_0022647 Ga0496100_0022647_1672_2745 322
79 3300048906 Ga0496103_0007232 Ga0496103_0007232_3224_4297 322
80 3300048909 Ga0496106_0035552 Ga0496106_0035552_981_2054 322
81 3300048914 Ga0496111_0052210 Ga0496111_0052210_504_1577 322
82 3300049129 Ga0501309_003160 Ga0501309_003160_498_1526 322
83 3300049160 Ga0501304_000121 Ga0501304_000121_1622_2650 322
84 3300049160 Ga0501304_002325 Ga0501304_002325_22_1050 322
85 3300049161 Ga0501305_000236 Ga0501305_000236_1402_2430 322
86 3300049527 Ga0501311_000185 Ga0501311_000185_883_1911 322
87 3300049528 Ga0501312_000172 Ga0501312_000172_1619_2647 322
88 3300049530 Ga0501314_000191 Ga0501314_000191_1621_2649 322
89 3300049531 Ga0501315_000602 Ga0501315_000602_463_1491 322
90 3300049532 Ga0501316_000097 Ga0501316_000097_1619_2647 322
91 3300049533 Ga0501317_000110 Ga0501317_000110_1620_2648 322
92 3300049534 Ga0501318_000068 Ga0501318_000068_1619_2647 322
93 3300049534 Ga0501318_000078 Ga0501318_000078_1651_2679 322
94 3300049534 Ga0501318_004803 Ga0501318_004803_106_1134 322
95 3300049535 Ga0501319_000049 Ga0501319_000049_1187_2215 322
96 3300049536 Ga0501320_000083 Ga0501320_000083_1619_2647 322
97 3300049537 Ga0501321_000082 Ga0501321_000082_1619_2647 322
98 3300049537 Ga0501321_000400 Ga0501321_000400_63_1091 322
99 3300049539 Ga0501323_000133 Ga0501323_000133_1617_2645 322
100 3300049540 Ga0501324_000173 Ga0501324_000173_1129_2157 322
101 3300049541 Ga0501325_000135 Ga0501325_000135_22_1050 322
102 3300053083 Ga0495655_0005118 Ga0495655_0005118_1010_2038 322
103 3300053140 Ga0500573_0056813 Ga0500573_0056813_542_1621 322
104 3300005535 Ga0070684_100390093 Ga0070684_1003900931 323
105 3300031901 Ga0307406_10181551 Ga0307406_101815511 323
106 3300046463 Ga0495653_0003711 Ga0495653_0003711_6042_7115 323
107 3300046477 Ga0495664_0036238 Ga0495664_0036238_1553_2626 323
108 3300046499 Ga0495594_0110301 Ga0495594_0110301_456_1529 323
109 3300046531 Ga0495665_0000442 Ga0495665_0000442_6906_7979 323
110 3300046535 Ga0495586_0001309 Ga0495586_0001309_11194_12267 323
111 3300046536 Ga0495587_0004388 Ga0495587_0004388_7656_8729 323
112 3300046543 Ga0495645_0000314 Ga0495645_0000314_20527_21600 323
113 3300046559 Ga0495667_0000209 Ga0495667_0000209_24991_26064 323
114 3300046674 Ga0495588_0055537 Ga0495588_0055537_39_1112 323
115 3300046675 Ga0495657_0161625 Ga0495657_0161625_246_1319 323
116 3300046809 Ga0495600_0006815 Ga0495600_0006815_1852_2925 323
117 3300047444 Ga0495675_0000831 Ga0495675_0000831_1158_2231 323
118 3300053153 Ga0500616_0000433 Ga0500616_0000433_24402_25469 323
119 3300013104 Ga0157370_10052646 Ga0157370_100526462 324
120 3300013306 Ga0163162_10298437 Ga0163162_102984372 324
121 3300044901 Ga0466960_0087880 Ga0466960_0087880_63_1100 324
122 3300048914 Ga0496111_0043827 Ga0496111_0043827_1767_2822 324
123 3300049537 Ga0501321_002284 Ga0501321_002284_540_1583 324
124 3300053140 Ga0500573_0000059 Ga0500573_0000059_8331_9389 324
125 iso_pu_bacteria 2554235227 2555229872 324
126 iso_pu_bacteria 2654587600 2655032573 324
127 3300031649 Ga0307514_10016061 Ga0307514_100160613 325
128 3300053140 Ga0500573_0000382 Ga0500573_0000382_6893_7960 325
129 3300006038 Ga0075365_10017575 Ga0075365_100175752 328
130 3300006051 Ga0075364_10000664 Ga0075364_100006642 328
131 3300041453 Ga0451797_0789979 Ga0451797_0789979_18_1067 328
132 3300048929 Ga0496126_0149811 Ga0496126_0149811_161_1222 328
133 3300050491 nmdc:mga00v17_10485_c1 nmdc:mga00v17_10485_c1_3724_4785 328
134 3300050492 nmdc:mga0yw44_26395_c1 nmdc:mga0yw44_26395_c1_812_1873 328
135 3300053153 Ga0500616_0025549 Ga0500616_0025549_2075_3136 328
136 iso_pu_bacteria 2870622029 2870623346 328
137 iso_pu_bacteria 2939657138 2939657780 328
138 3300053098 Ga0500650_0003657 Ga0500650_0003657_992_2068 329
139 3300053142 Ga0500577_0013527 Ga0500577_0013527_662_1738 329
140 iso_pu_bacteria 2862993130 2862996434 330
141 iso_pu_bacteria 2964326757 2964326816 330
142 3300053136 Ga0500559_0000102 Ga0500559_0000102_23516_24595 331
143 iso_pu_bacteria 2643221549 2643767592 331
144 iso_pu_bacteria 2643221572 2643875343 331
145 iso_pu_bacteria 2643221619 2644110897 331
146 iso_pu_bacteria 2643221669 2644382399 331
147 iso_pu_bacteria 2721755702 2723642145 331
148 iso_pu_bacteria 2808606372 2808902213 331
149 iso_pu_bacteria 2895660088 2895661433 331
150 iso_pu_bacteria 2919443155 2919446097 331
151 iso_pu_bacteria 2935409751 2935411514 331
152 iso_pu_bacteria 8046352972 8046356303 331
153 3300028794 Ga0307515_10065688 Ga0307515_100656885 332
154 3300048922 Ga0496119_0022129 Ga0496119_0022129_2142_3215 332
155 iso_pu_bacteria 2852677369 2852679490 332
156 iso_pu_bacteria 2897561785 2897563517 332
157 3300005327 Ga0070658_10076165 Ga0070658_100761652 333
158 3300020080 Ga0206350_10993430 Ga0206350_109934302 333
159 3300025909 Ga0207705_10031366 Ga0207705_100313662 333
160 3300025949 Ga0207667_10404968 Ga0207667_104049682 333
161 3300048924 Ga0496121_0262448 Ga0496121_0262448_17_1090 333
162 iso_pu_bacteria 2585428094 2587862687 333
163 iso_pu_bacteria 2643221649 2644279574 333
164 iso_pu_bacteria 2939660829 2939660960 333
165 3300005288 Ga0065714_10071915 Ga0065714_100719152 334
166 3300005455 Ga0070663_100290866 Ga0070663_1002908661 334
167 3300013105 Ga0157369_10021407 Ga0157369_100214076 334
168 3300022467 Ga0224712_10006014 Ga0224712_100060143 334
169 3300049570 Ga0501033_0301228 Ga0501033_0301228_35_1105 334
170 3300049571 Ga0501034_0038369 Ga0501034_0038369_2077_3147 334
171 3300049572 Ga0501036_0082425 Ga0501036_0082425_1626_2696 334
172 3300049573 Ga0501037_0111497 Ga0501037_0111497_605_1675 334
173 3300049574 Ga0501038_0039539 Ga0501038_0039539_3008_4078 334
174 3300049580 Ga0501046_0007016 Ga0501046_0007016_8047_9117 334
175 3300049586 Ga0501070_0055423 Ga0501070_0055423_1911_2981 334
176 3300049588 Ga0501072_0116858 Ga0501072_0116858_169_1239 334
177 3300049589 Ga0501073_0009587 Ga0501073_0009587_4700_5770 334
178 3300049590 Ga0501074_0010738 Ga0501074_0010738_5439_6509 334
179 3300049822 Ga0501035_0074620 Ga0501035_0074620_1868_2938 334
180 3300049822 Ga0501035_0286977 Ga0501035_0286977_296_1366 334
181 3300049823 Ga0501044_0069803 Ga0501044_0069803_2472_3542 334
182 iso_pu_bacteria 2643221575 2643885115 334
183 iso_pu_bacteria 2773857758 2774381659 334
184 iso_pu_bacteria 2811994872 2812322842 334
185 iso_pu_bacteria 2904509784 2904512685 334
186 iso_pu_bacteria 2906799679 2906800222 334
187 iso_pu_bacteria 2908678064 2908681317 334
188 iso_pu_bacteria 2919069694 2919071481 334
189 iso_pu_bacteria 2974294766 2974297703 334
190 iso_pu_bacteria 2974324384 2974326062 334
191 iso_pu_bacteria 2977236895 2977239819 334
192 iso_pu_bacteria 2977264416 2977266262 334
193 iso_pu_bacteria 2984542743 2984545908 334
194 3300031824 Ga0307413_10144708 Ga0307413_101447081 335
195 3300020069 Ga0197907_11125962 Ga0197907_111259623 337
196 iso_pu_bacteria 2643221553 2643786144 341
197 iso_pu_bacteria 2747842429 2747952394 341
198 iso_pu_bacteria 8004182704 8004184856 341
199 3300001979 JGI24740J21852_10008054 JGI24740J21852_100080542 344
200 3300002738 JGI25154J39366_1002087 JGI25154J39366_10020873 344
201 3300013102 Ga0157371_10056669 Ga0157371_100566692 344
202 3300013306 Ga0163162_10011086 Ga0163162_100110865 344
203 3300025246 Ga0209646_1000071 Ga0209646_1000071211 344
204 3300044765 Ga0466970_0000004 Ga0466970_0000004_86445_87518 344
205 3300045976 Ga0466967_0393042 Ga0466967_0393042_14_1087 344
206 3300046530 Ga0495654_0033080 Ga0495654_0033080_1009_2088 344
207 3300048929 Ga0496126_0075463 Ga0496126_0075463_1425_2501 344
208 3300049571 Ga0501034_0000227 Ga0501034_0000227_79537_80613 344

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00355

Rieske

Rieske [2Fe-2S] domain

267

334

0.89

PF19297

QcrA_N

QcrA subunit N-terminal region

45

219

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nyk-assembly2.cif.gz_B crystal structure of the rieske protein from thermus thermophilus 0.8082 183 337
8hn2-assembly1.cif.gz_B selenomethionine-labelled soluble domain of rieske iron-sulfur protein from chlorobaculum tepidum 0.7965 202 328
1nyk-assembly2.cif.gz_B crystal structure of the rieske protein from thermus thermophilus 0.7796 183 337
8ed4-assembly1.cif.gz_D structure of the complex between the arsenite oxidase and its native electron acceptor cytochrome c552 from pseudorhizobium sp. str. nt-26 0.7696 189 336
5cxm-assembly2.cif.gz_D crystal structure of the cyanobacterial plasma membrane rieske protein petc3 from synechocystis pcc 6803 0.7562 238 330
ID Description Score Start End Superfamily
3fouB00 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.8145 185 337 2.102.10.10
af_P9WH23_260_426_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.7942 193 343 2.102.10.10
3fouB00 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.7807 185 337 2.102.10.10
4aayB00 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.7642 189 336 2.102.10.10
5cxmD00 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.7562 238 330 2.102.10.10
ID Description Score Start End GO Terms
AF-A0A6J6BEY1-F1-model_v4 Unannotated protein 0.9399 277 343 GO:0046872
GO:0051537
AF-A0A6G2UGY3-F1-model_v4 Ubiquinol-cytochrome C reductase 0.9106 277 344 GO:0046872
GO:0051537
AF-A0A6J5ZAB4-F1-model_v4 Unannotated protein 0.9051 275 344 GO:0046872
GO:0051537
AF-A0A7K0LK34-F1-model_v4 Cytochrome bc1 complex Rieske iron-sulfur subunit (Cytochrome bc1 reductase complex subunit QcrA) 0.9026 194 344 GO:0016020
GO:0046872
GO:0051537
AF-W4TV51-F1-model_v4 deleted 0.902 246 344

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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