F318272

General Info

Members Datasets Scaffolds Average Seq Length
208 149 203 282

Family's Representative Sequence

Representative Sequence 3300046559|Ga0495667_0035412|Ga0495667_0035412_370_1389
Length 339
Sequence MAQIDDLPPLRDVIRRHGLSAKKSLGQNFLLDMNLTARIARAGGPLDGATVVEVGPGPGGLTRALIAKGTKRVIAIERDDRAIAALEEIATRYPGRIEIVPGDALEFDARTALSGERARVIANLPYNIATALLIGWLTVPWPPWFDMLVLMFQREVAERITAAPGSKSYGRLAVLANWRCDTKMLFDVAPSAFVPPPKVRSSVVRLVPHPAPLACDAEALQKVTAAAFGQRRKMLRQSLKSLGTDPRALLAETGIDPTARAEEIPVEAGQSPRVKSGHANTSSIADRLWCTVVRNSGGRSAAKRDGGAGSHFALRHLPFRPAHAGRLFPAGRRQAARRA

Samples

Sample ID Description Type Environment
1 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
2 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
3 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
4 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
5 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
69 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
76 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
77 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
84 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
94 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
98 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
99 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
100 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
101 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
102 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
118 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
136 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
145 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
146 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
147 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.6
Metatranscriptomes 0
Isolates 2.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.65
Nodule 0
Rhizoplane 6.73
Rhizosphere 80.77
Stem 0
Stem Tuber 0
Unclassified 3.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003672 3300003203 Bacteria 7190
2 rootH2_10102629 3300003320 Bacteria 2994
3 rootH2_10160554 3300003320 Bacteria 1616
4 Ga0070658_10075111 3300005327 Bacteria 2772
5 Ga0070670_100014415 3300005331 Bacteria 6783
6 Ga0070682_100001181 3300005337 Bacteria 14903
7 Ga0070661_100020226 3300005344 Bacteria 4744
8 Ga0070661_100136121 3300005344 Bacteria 1849
9 Ga0070674_100316757 3300005356 Bacteria 1249
10 Ga0070673_100119376 3300005364 Bacteria 2197
11 Ga0070659_100059858 3300005366 Bacteria 3007
12 Ga0070713_100456470 3300005436 Bacteria 1201
13 Ga0070663_100067336 3300005455 Bacteria 2597
14 Ga0070681_10008082 3300005458 Bacteria 10294
15 Ga0068853_100005101 3300005539 Bacteria 10256
16 Ga0068853_100005273 3300005539 Bacteria 10121
17 Ga0068853_100039146 3300005539 Bacteria 4043
18 Ga0070693_100004575 3300005547 Bacteria 6562
19 Ga0070665_100198964 3300005548 Bacteria 2004
20 Ga0068855_100211511 3300005563 Bacteria 2179
21 Ga0068855_100334208 3300005563 Bacteria 1672
22 Ga0068857_100165917 3300005577 Bacteria 2005
23 Ga0068854_100012001 3300005578 Bacteria 5662
24 Ga0068856_100217542 3300005614 Bacteria 1925
25 Ga0070702_100252585 3300005615 Bacteria 1196
26 Ga0068852_100006779 3300005616 Bacteria 8311
27 Ga0068852_100030163 3300005616 Bacteria 4461
28 Ga0081539_10001242 3300005985 Bacteria 45360
29 Ga0070717_10191158 3300006028 Bacteria 1789
30 Ga0075365_10000147 3300006038 Bacteria 22269
31 Ga0075368_10021761 3300006042 Bacteria 2437
32 Ga0075363_100060325 3300006048 Bacteria 2042
33 Ga0075367_10020662 3300006178 Bacteria 3671
34 Ga0075367_10177292 3300006178 Bacteria 1328
35 Ga0075370_10116334 3300006353 Bacteria 1554
36 Ga0075428_100531852 3300006844 Bacteria 1257
37 Ga0105240_10650608 3300009093 Bacteria 1155
38 Ga0105245_10505062 3300009098 Bacteria 1226
39 Ga0114129_10065295 3300009147 Bacteria 5079
40 Ga0105237_10001366 3300009545 Bacteria 32234
41 Ga0105238_10020992 3300009551 Bacteria 6653
42 Ga0105249_10889905 3300009553 Bacteria 957
43 Ga0105239_10021619 3300010375 Bacteria 7094
44 Ga0105239_10025698 3300010375 Bacteria 6485
45 Ga0105239_10608401 3300010375 Bacteria 1247
46 Ga0105246_10265525 3300011119 Bacteria 1369
47 Ga0157373_10010608 3300013100 Bacteria 6781
48 Ga0157370_10013323 3300013104 Bacteria 8469
49 Ga0157370_10025426 3300013104 Bacteria 5860
50 Ga0157369_10016690 3300013105 Bacteria 8254
51 Ga0157375_11035671 3300013308 Bacteria 959
52 Ga0157376_10297389 3300014969 Bacteria 1527
53 Ga0207710_10087522 3300025900 Bacteria 1453
54 Ga0207643_10156098 3300025908 Bacteria 1371
55 Ga0207705_10039350 3300025909 Bacteria 3388
56 Ga0207707_10006763 3300025912 Bacteria 10012
57 Ga0207695_10040536 3300025913 Bacteria 4991
58 Ga0207671_10000215 3300025914 Bacteria 87204
59 Ga0207657_10071824 3300025919 Bacteria 2929
60 Ga0207657_10152737 3300025919 Bacteria 1879
61 Ga0207649_10371969 3300025920 Bacteria 1063
62 Ga0207650_10004835 3300025925 Bacteria 9202
63 Ga0207650_10175214 3300025925 Bacteria 1707
64 Ga0207687_10205096 3300025927 Bacteria 1543
65 Ga0207700_10302151 3300025928 Bacteria 1382
66 Ga0207690_10063475 3300025932 Bacteria 2519
67 Ga0207690_10403606 3300025932 Bacteria 1090
68 Ga0207670_10223801 3300025936 Bacteria 1442
69 Ga0207667_10081512 3300025949 Bacteria 3352
70 Ga0207651_10088572 3300025960 Bacteria 2257
71 Ga0207703_10148101 3300026035 Bacteria 2044
72 Ga0207639_10003230 3300026041 Bacteria 10962
73 Ga0207639_10071766 3300026041 Bacteria 2709
74 Ga0207678_10109239 3300026067 Bacteria 2359
75 Ga0207678_10149586 3300026067 Bacteria 1993
76 Ga0207674_10005375 3300026116 Bacteria 15237
77 Ga0268266_10000255 3300028379 Bacteria 89930
78 Ga0265337_1001661 3300028556 Bacteria 10806
79 Ga0265325_10004297 3300031241 Bacteria 9032
80 Ga0265316_10008984 3300031344 Bacteria 9218
81 Ga0265314_10004556 3300031711 Bacteria 12800
82 Ga0265342_10062791 3300031712 Bacteria 2185
83 Ga0307412_10270431 3300031911 Bacteria 1330
84 Ga0307414_10083663 3300032004 Bacteria 2344
85 Ga0373938_0042395 3300034957 Bacteria 1015
86 Ga0373939_0073885 3300035114 Bacteria 1117
87 Ga0373955_0017071 3300035172 Bacteria 3584
88 Ga0373933_0001322 3300035724 Bacteria 14583
89 Ga0373937_0172375 3300036401 Bacteria 2030
90 Ga0395899_0146753 3300037312 Bacteria 1674
91 Ga0395900_0242262 3300037418 Bacteria 1808
92 Ga0395898_0070056 3300037466 Bacteria 3391
93 Ga0395898_0202991 3300037466 Bacteria 1892
94 Ga0400483_023651 3300039062 Bacteria 2290
95 Ga0439465_0020538 3300041413 Bacteria 2069
96 Ga0495592_0118947 3300046454 Bacteria 1861
97 Ga0495582_0125642 3300046473 Bacteria 1447
98 Ga0495605_0024831 3300046474 Bacteria 3131
99 Ga0495587_0124527 3300046536 Bacteria 1475
100 Ga0495667_0035412 3300046559 Bacteria 3336
101 Ga0495634_0200738 3300046642 Bacteria 1239
102 Ga0495635_0106481 3300046663 Bacteria 1915
103 Ga0495657_0015373 3300046675 Bacteria 5604
104 Ga0495657_0107780 3300046675 Bacteria 1768
105 Ga0495624_0211859 3300046690 Bacteria 1175
106 Ga0495600_0175955 3300046809 Bacteria 1380
107 Ga0495581_0073112 3300047315 Bacteria 1984
108 Ga0495604_0027839 3300047317 Bacteria 4495
109 Ga0495676_0153048 3300047321 Bacteria 1639
110 Ga0495680_0029092 3300047322 Bacteria 4527
111 Ga0495684_0204945 3300047471 Bacteria 1453
112 Ga0495593_0050524 3300047673 Bacteria 2203
113 Ga0495602_0073929 3300048088 Bacteria 2899
114 Ga0496100_0011061 3300048903 Bacteria 5121
115 Ga0496102_0008126 3300048905 Bacteria 8978
116 Ga0496103_0001539 3300048906 Bacteria 15366
117 Ga0496105_0000653 3300048908 Bacteria 23216
118 Ga0496106_0003908 3300048909 Bacteria 11123
119 Ga0496107_0015068 3300048910 Bacteria 5416
120 Ga0496109_0001027 3300048912 Bacteria 23090
121 Ga0496110_0023829 3300048913 Bacteria 5209
122 Ga0496111_0005151 3300048914 Bacteria 8335
123 Ga0496112_0000804 3300048915 Bacteria 22118
124 Ga0496113_0001499 3300048916 Bacteria 13066
125 Ga0496113_0172805 3300048916 Bacteria 1712
126 Ga0496114_0044375 3300048917 Bacteria 3688
127 Ga0496115_0004230 3300048918 Bacteria 10380
128 Ga0496122_0006140 3300048925 Bacteria 13981
129 Ga0496123_0001102 3300048926 Bacteria 40509
130 Ga0496126_0022982 3300048929 Bacteria 6050
131 Ga0501032_0018835 3300049569 Bacteria 4830
132 Ga0501032_0137643 3300049569 Bacteria 1609
133 Ga0501032_0329040 3300049569 Bacteria 985
134 Ga0501033_0033299 3300049570 Bacteria 3869
135 Ga0501033_0065689 3300049570 Bacteria 2669
136 Ga0501033_0413422 3300049570 Bacteria 940
137 Ga0501034_0011412 3300049571 Bacteria 9209
138 Ga0501034_0044084 3300049571 Bacteria 4512
139 Ga0501034_0062419 3300049571 Bacteria 3741
140 Ga0501034_0067953 3300049571 Bacteria 3575
141 Ga0501034_0076717 3300049571 Bacteria 3348
142 Ga0501034_0089450 3300049571 Bacteria 3077
143 Ga0501034_0102298 3300049571 Bacteria 2858
144 Ga0501034_0106781 3300049571 Bacteria 2792
145 Ga0501034_0174417 3300049571 Bacteria 2116
146 Ga0501034_0450374 3300049571 Bacteria 1205
147 Ga0501036_0010766 3300049572 Bacteria 7561
148 Ga0501036_0061699 3300049572 Bacteria 3175
149 Ga0501036_0070963 3300049572 Bacteria 2945
150 Ga0501036_0164273 3300049572 Bacteria 1871
151 Ga0501037_0037629 3300049573 Bacteria 3567
152 Ga0501038_0036433 3300049574 Bacteria 4317
153 Ga0501039_0079499 3300049575 Bacteria 2551
154 Ga0501039_0091717 3300049575 Bacteria 2368
155 Ga0501043_0031978 3300049579 Bacteria 4136
156 Ga0501043_0136347 3300049579 Bacteria 1922
157 Ga0501043_0275701 3300049579 Bacteria 1290
158 Ga0501047_0005732 3300049581 Bacteria 11690
159 Ga0501047_0008376 3300049581 Bacteria 9761
160 Ga0501047_0132310 3300049581 Bacteria 2375
161 Ga0501047_0331971 3300049581 Bacteria 1359
162 Ga0501047_0640709 3300049581 Bacteria 882
163 Ga0501067_0064059 3300049583 Bacteria 2036
164 Ga0501070_0005929 3300049586 Bacteria 10418
165 Ga0501070_0048910 3300049586 Bacteria 3511
166 Ga0501070_0056750 3300049586 Bacteria 3246
167 Ga0501070_0218707 3300049586 Bacteria 1562
168 Ga0501073_0008508 3300049589 Bacteria 7611
169 Ga0501073_0045923 3300049589 Bacteria 3075
170 Ga0501073_0102754 3300049589 Bacteria 1985
171 Ga0501077_0044722 3300049593 Bacteria 2812
172 Ga0501080_0041900 3300049742 Bacteria 4265
173 Ga0501080_0110284 3300049742 Bacteria 2550
174 Ga0501080_0136007 3300049742 Bacteria 2274
175 Ga0501080_0175070 3300049742 Bacteria 1977
176 Ga0501080_0208534 3300049742 Bacteria 1791
177 Ga0501035_0002103 3300049822 Bacteria 19790
178 Ga0501035_0010593 3300049822 Bacteria 8538
179 Ga0501044_0044629 3300049823 Bacteria 4599
180 Ga0501044_0058237 3300049823 Bacteria 3962
181 Ga0501044_0066172 3300049823 Bacteria 3686
182 Ga0501044_0270653 3300049823 Bacteria 1634
183 Ga0501044_0334109 3300049823 Bacteria 1437
184 Ga0501044_0367584 3300049823 Bacteria 1355
185 nmdc:mga03683_134916_c1 3300050489 Bacteria 1106
186 nmdc:mga03n38_23960_c1 3300050490 Bacteria 2490
187 nmdc:mga00v17_121129_c1 3300050491 Bacteria 1666
188 nmdc:mga0yw44_389157_c1 3300050492 Bacteria 942
189 nmdc:mga0yw44_70399_c1 3300050492 Bacteria 2169
190 nmdc:mga06z11_1892_c1 3300050494 Bacteria 7890
191 nmdc:mga0n895_19868_c2 3300050512 Bacteria 5934
192 nmdc:mga0sz30_20539_c1 3300050516 Bacteria 2665
193 Ga0495601_0043864 3300053077 Bacteria 2809
194 Ga0495612_0009116 3300053078 Bacteria 4025
195 Ga0495619_0217443 3300053085 Bacteria 1323
196 Ga0500556_0000428 3300053104 Bacteria 30202
197 Ga0500652_000429 3300053131 Bacteria 14958
198 Ga0500634_0000087 3300053161 Bacteria 35438
199 Ga0500634_0101134 3300053161 Bacteria 1442
200 Ga0500645_011012 3300053730 Bacteria 2969
201 Ga0501084_0164893 3300054114 Bacteria 1870
202 Ga0501084_0185302 3300054114 Bacteria 1757
203 Ga0501082_0104888 3300060353 Bacteria 2446

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300032004 Ga0307414_10083663 Ga0307414_100836634 269
2 3300049569 Ga0501032_0137643 Ga0501032_0137643_643_1464 271
3 3300049570 Ga0501033_0033299 Ga0501033_0033299_1500_2321 271
4 3300049571 Ga0501034_0089450 Ga0501034_0089450_1182_2003 271
5 3300049823 Ga0501044_0044629 Ga0501044_0044629_749_1570 271
6 3300025919 Ga0207657_10071824 Ga0207657_100718241 272
7 3300053730 Ga0500645_011012 Ga0500645_011012_1691_2554 272
8 iso_pu_bacteria 2939669807 2939670182 272
9 3300039062 Ga0400483_023651 Ga0400483_023651_62_901 273
10 3300049571 Ga0501034_0067953 Ga0501034_0067953_1230_2060 273
11 iso_pu_bacteria 2738543031 2739347343 273
12 iso_pu_bacteria 2840878972 2840883674 273
13 iso_pu_bacteria 2919679072 2919681230 273
14 3300049569 Ga0501032_0329040 Ga0501032_0329040_120_953 274
15 3300049586 Ga0501070_0218707 Ga0501070_0218707_19_867 274
16 3300049742 Ga0501080_0208534 Ga0501080_0208534_671_1519 274
17 3300003320 rootH2_10102629 rootH2_101026293 275
18 3300005344 Ga0070661_100136121 Ga0070661_1001361212 275
19 3300005436 Ga0070713_100456470 Ga0070713_1004564701 275
20 3300005563 Ga0068855_100211511 Ga0068855_1002115112 275
21 3300005577 Ga0068857_100165917 Ga0068857_1001659172 275
22 3300005578 Ga0068854_100012001 Ga0068854_1000120011 275
23 3300005616 Ga0068852_100030163 Ga0068852_1000301634 275
24 3300006028 Ga0070717_10191158 Ga0070717_101911582 275
25 3300006178 Ga0075367_10177292 Ga0075367_101772921 275
26 3300006353 Ga0075370_10116334 Ga0075370_101163342 275
27 3300013308 Ga0157375_11035671 Ga0157375_110356711 275
28 3300025900 Ga0207710_10087522 Ga0207710_100875222 275
29 3300025908 Ga0207643_10156098 Ga0207643_101560982 275
30 3300025909 Ga0207705_10039350 Ga0207705_100393502 275
31 3300025919 Ga0207657_10152737 Ga0207657_101527372 275
32 3300025920 Ga0207649_10371969 Ga0207649_103719691 275
33 3300025925 Ga0207650_10175214 Ga0207650_101752142 275
34 3300025928 Ga0207700_10302151 Ga0207700_103021512 275
35 3300025936 Ga0207670_10223801 Ga0207670_102238012 275
36 3300025949 Ga0207667_10081512 Ga0207667_100815123 275
37 3300026041 Ga0207639_10071766 Ga0207639_100717662 275
38 3300026116 Ga0207674_10005375 Ga0207674_1000537512 275
39 3300031241 Ga0265325_10004297 Ga0265325_100042975 275
40 3300031344 Ga0265316_10008984 Ga0265316_100089848 275
41 3300031712 Ga0265342_10062791 Ga0265342_100627913 275
42 3300035114 Ga0373939_0073885 Ga0373939_0073885_57_899 275
43 3300037466 Ga0395898_0202991 Ga0395898_0202991_778_1620 275
44 3300049570 Ga0501033_0413422 Ga0501033_0413422_56_895 275
45 3300049571 Ga0501034_0011412 Ga0501034_0011412_1150_2001 275
46 3300049571 Ga0501034_0044084 Ga0501034_0044084_651_1487 275
47 3300049571 Ga0501034_0102298 Ga0501034_0102298_215_1051 275
48 3300049571 Ga0501034_0450374 Ga0501034_0450374_252_1088 275
49 3300049572 Ga0501036_0070963 Ga0501036_0070963_46_885 275
50 3300049574 Ga0501038_0036433 Ga0501038_0036433_1137_1976 275
51 3300049581 Ga0501047_0640709 Ga0501047_0640709_33_872 275
52 3300049589 Ga0501073_0045923 Ga0501073_0045923_433_1272 275
53 3300049593 Ga0501077_0044722 Ga0501077_0044722_1823_2659 275
54 3300049823 Ga0501044_0066172 Ga0501044_0066172_2789_3628 275
55 3300050489 nmdc:mga03683_134916_c1 nmdc:mga03683_134916_c1_181_1017 275
56 3300054114 Ga0501084_0164893 Ga0501084_0164893_532_1374 275
57 3300054114 Ga0501084_0185302 Ga0501084_0185302_183_1019 275
58 3300060353 Ga0501082_0104888 Ga0501082_0104888_622_1458 275
59 iso_pu_bacteria 2898795034 2898799123 275
60 3300003320 rootH2_10160554 rootH2_101605542 276
61 3300005331 Ga0070670_100014415 Ga0070670_1000144154 276
62 3300005356 Ga0070674_100316757 Ga0070674_1003167572 276
63 3300005364 Ga0070673_100119376 Ga0070673_1001193763 276
64 3300005455 Ga0070663_100067336 Ga0070663_1000673362 276
65 3300005548 Ga0070665_100198964 Ga0070665_1001989642 276
66 3300005615 Ga0070702_100252585 Ga0070702_1002525851 276
67 3300006844 Ga0075428_100531852 Ga0075428_1005318522 276
68 3300009093 Ga0105240_10650608 Ga0105240_106506082 276
69 3300009147 Ga0114129_10065295 Ga0114129_100652953 276
70 3300009545 Ga0105237_10001366 Ga0105237_1000136620 276
71 3300010375 Ga0105239_10021619 Ga0105239_100216195 276
72 3300010375 Ga0105239_10025698 Ga0105239_100256984 276
73 3300011119 Ga0105246_10265525 Ga0105246_102655251 276
74 3300014969 Ga0157376_10297389 Ga0157376_102973892 276
75 3300025914 Ga0207671_10000215 Ga0207671_100002159 276
76 3300025925 Ga0207650_10004835 Ga0207650_100048354 276
77 3300025927 Ga0207687_10205096 Ga0207687_102050962 276
78 3300025960 Ga0207651_10088572 Ga0207651_100885722 276
79 3300026035 Ga0207703_10148101 Ga0207703_101481012 276
80 3300026067 Ga0207678_10109239 Ga0207678_101092392 276
81 3300028379 Ga0268266_10000255 Ga0268266_1000025545 276
82 3300034957 Ga0373938_0042395 Ga0373938_0042395_137_976 276
83 3300046473 Ga0495582_0125642 Ga0495582_0125642_243_1082 276
84 3300046642 Ga0495634_0200738 Ga0495634_0200738_188_1027 276
85 3300046690 Ga0495624_0211859 Ga0495624_0211859_285_1124 276
86 3300046809 Ga0495600_0175955 Ga0495600_0175955_97_936 276
87 3300047315 Ga0495581_0073112 Ga0495581_0073112_128_967 276
88 3300047321 Ga0495676_0153048 Ga0495676_0153048_612_1451 276
89 3300047471 Ga0495684_0204945 Ga0495684_0204945_601_1440 276
90 3300047673 Ga0495593_0050524 Ga0495593_0050524_669_1508 276
91 3300048903 Ga0496100_0011061 Ga0496100_0011061_1304_2143 276
92 3300048905 Ga0496102_0008126 Ga0496102_0008126_2736_3575 276
93 3300048906 Ga0496103_0001539 Ga0496103_0001539_2095_2934 276
94 3300048908 Ga0496105_0000653 Ga0496105_0000653_5502_6341 276
95 3300048909 Ga0496106_0003908 Ga0496106_0003908_1917_2756 276
96 3300048910 Ga0496107_0015068 Ga0496107_0015068_2509_3348 276
97 3300048912 Ga0496109_0001027 Ga0496109_0001027_3170_4009 276
98 3300048913 Ga0496110_0023829 Ga0496110_0023829_2664_3503 276
99 3300048914 Ga0496111_0005151 Ga0496111_0005151_1093_1932 276
100 3300048915 Ga0496112_0000804 Ga0496112_0000804_19364_20203 276
101 3300048916 Ga0496113_0001499 Ga0496113_0001499_11308_12147 276
102 3300048917 Ga0496114_0044375 Ga0496114_0044375_1751_2590 276
103 3300048918 Ga0496115_0004230 Ga0496115_0004230_7185_8024 276
104 3300049569 Ga0501032_0018835 Ga0501032_0018835_1134_1979 276
105 3300049571 Ga0501034_0076717 Ga0501034_0076717_2020_2865 276
106 3300049571 Ga0501034_0106781 Ga0501034_0106781_1724_2569 276
107 3300049571 Ga0501034_0174417 Ga0501034_0174417_237_1082 276
108 3300049572 Ga0501036_0010766 Ga0501036_0010766_4685_5530 276
109 3300049572 Ga0501036_0164273 Ga0501036_0164273_917_1762 276
110 3300049575 Ga0501039_0079499 Ga0501039_0079499_1463_2308 276
111 3300049575 Ga0501039_0091717 Ga0501039_0091717_467_1312 276
112 3300049579 Ga0501043_0136347 Ga0501043_0136347_310_1155 276
113 3300049581 Ga0501047_0005732 Ga0501047_0005732_10029_10874 276
114 3300049581 Ga0501047_0331971 Ga0501047_0331971_27_872 276
115 3300049583 Ga0501067_0064059 Ga0501067_0064059_419_1264 276
116 3300049586 Ga0501070_0005929 Ga0501070_0005929_3764_4609 276
117 3300049586 Ga0501070_0048910 Ga0501070_0048910_2587_3432 276
118 3300049589 Ga0501073_0102754 Ga0501073_0102754_450_1295 276
119 3300049742 Ga0501080_0110284 Ga0501080_0110284_854_1699 276
120 3300049822 Ga0501035_0002103 Ga0501035_0002103_7170_8015 276
121 3300049823 Ga0501044_0058237 Ga0501044_0058237_2173_3018 276
122 3300049823 Ga0501044_0270653 Ga0501044_0270653_546_1391 276
123 3300050492 nmdc:mga0yw44_389157_c1 nmdc:mga0yw44_389157_c1_10_849 276
124 3300050512 nmdc:mga0n895_19868_c2 nmdc:mga0n895_19868_c2_4304_5143 276
125 3300053085 Ga0495619_0217443 Ga0495619_0217443_11_850 276
126 3300053161 Ga0500634_0101134 Ga0500634_0101134_492_1337 276
127 3300005337 Ga0070682_100001181 Ga0070682_1000011816 277
128 3300005366 Ga0070659_100059858 Ga0070659_1000598582 277
129 3300005458 Ga0070681_10008082 Ga0070681_100080828 277
130 3300005539 Ga0068853_100005273 Ga0068853_1000052738 277
131 3300005547 Ga0070693_100004575 Ga0070693_1000045755 277
132 3300005563 Ga0068855_100334208 Ga0068855_1003342081 277
133 3300013100 Ga0157373_10010608 Ga0157373_100106087 277
134 3300013104 Ga0157370_10025426 Ga0157370_100254264 277
135 3300025912 Ga0207707_10006763 Ga0207707_100067638 277
136 3300025932 Ga0207690_10403606 Ga0207690_104036062 277
137 3300031711 Ga0265314_10004556 Ga0265314_100045564 277
138 3300037418 Ga0395900_0242262 Ga0395900_0242262_196_1041 277
139 3300037466 Ga0395898_0070056 Ga0395898_0070056_129_974 277
140 3300049571 Ga0501034_0062419 Ga0501034_0062419_1482_2330 277
141 3300049572 Ga0501036_0061699 Ga0501036_0061699_1433_2293 277
142 3300049573 Ga0501037_0037629 Ga0501037_0037629_1420_2280 277
143 3300049579 Ga0501043_0031978 Ga0501043_0031978_3193_4053 277
144 3300049581 Ga0501047_0132310 Ga0501047_0132310_1403_2251 277
145 3300049589 Ga0501073_0008508 Ga0501073_0008508_5447_6295 277
146 3300049742 Ga0501080_0136007 Ga0501080_0136007_295_1155 277
147 3300049742 Ga0501080_0175070 Ga0501080_0175070_970_1818 277
148 3300049823 Ga0501044_0367584 Ga0501044_0367584_220_1080 277
149 3300005327 Ga0070658_10075111 Ga0070658_100751112 278
150 3300005344 Ga0070661_100020226 Ga0070661_1000202264 278
151 3300005539 Ga0068853_100005101 Ga0068853_1000051014 278
152 3300005539 Ga0068853_100039146 Ga0068853_1000391463 278
153 3300005614 Ga0068856_100217542 Ga0068856_1002175422 278
154 3300005616 Ga0068852_100006779 Ga0068852_1000067792 278
155 3300006038 Ga0075365_10000147 Ga0075365_100001478 278
156 3300006042 Ga0075368_10021761 Ga0075368_100217612 278
157 3300006048 Ga0075363_100060325 Ga0075363_1000603252 278
158 3300006178 Ga0075367_10020662 Ga0075367_100206625 278
159 3300009098 Ga0105245_10505062 Ga0105245_105050622 278
160 3300009551 Ga0105238_10020992 Ga0105238_100209926 278
161 3300009553 Ga0105249_10889905 Ga0105249_108899051 278
162 3300010375 Ga0105239_10608401 Ga0105239_106084011 278
163 3300013104 Ga0157370_10013323 Ga0157370_100133238 278
164 3300013105 Ga0157369_10016690 Ga0157369_100166908 278
165 3300025913 Ga0207695_10040536 Ga0207695_100405363 278
166 3300025932 Ga0207690_10063475 Ga0207690_100634753 278
167 3300026041 Ga0207639_10003230 Ga0207639_100032306 278
168 3300026067 Ga0207678_10149586 Ga0207678_101495862 278
169 3300028556 Ga0265337_1001661 Ga0265337_10016614 278
170 3300031911 Ga0307412_10270431 Ga0307412_102704312 278
171 3300035172 Ga0373955_0017071 Ga0373955_0017071_1180_2034 278
172 3300035724 Ga0373933_0001322 Ga0373933_0001322_10384_11238 278
173 3300036401 Ga0373937_0172375 Ga0373937_0172375_1110_1964 278
174 3300037312 Ga0395899_0146753 Ga0395899_0146753_66_926 278
175 3300041413 Ga0439465_0020538 Ga0439465_0020538_1101_1958 278
176 3300046454 Ga0495592_0118947 Ga0495592_0118947_124_978 278
177 3300046536 Ga0495587_0124527 Ga0495587_0124527_412_1266 278
178 3300046559 Ga0495667_0035412 Ga0495667_0035412_370_1389 278
179 3300046663 Ga0495635_0106481 Ga0495635_0106481_766_1620 278
180 3300046675 Ga0495657_0015373 Ga0495657_0015373_4434_5288 278
181 3300046675 Ga0495657_0107780 Ga0495657_0107780_730_1584 278
182 3300047317 Ga0495604_0027839 Ga0495604_0027839_829_1683 278
183 3300047322 Ga0495680_0029092 Ga0495680_0029092_3433_4287 278
184 3300048088 Ga0495602_0073929 Ga0495602_0073929_933_1787 278
185 3300048916 Ga0496113_0172805 Ga0496113_0172805_382_1233 278
186 3300048929 Ga0496126_0022982 Ga0496126_0022982_5171_6022 278
187 3300049570 Ga0501033_0065689 Ga0501033_0065689_377_1267 278
188 3300049579 Ga0501043_0275701 Ga0501043_0275701_108_998 278
189 3300049581 Ga0501047_0008376 Ga0501047_0008376_8222_9112 278
190 3300049586 Ga0501070_0056750 Ga0501070_0056750_249_1139 278
191 3300049742 Ga0501080_0041900 Ga0501080_0041900_376_1266 278
192 3300049822 Ga0501035_0010593 Ga0501035_0010593_6655_7545 278
193 3300049823 Ga0501044_0334109 Ga0501044_0334109_205_1095 278
194 3300050490 nmdc:mga03n38_23960_c1 nmdc:mga03n38_23960_c1_299_1150 278
195 3300050491 nmdc:mga00v17_121129_c1 nmdc:mga00v17_121129_c1_375_1226 278
196 3300050492 nmdc:mga0yw44_70399_c1 nmdc:mga0yw44_70399_c1_1177_2028 278
197 3300050494 nmdc:mga06z11_1892_c1 nmdc:mga06z11_1892_c1_4925_5776 278
198 3300050516 nmdc:mga0sz30_20539_c1 nmdc:mga0sz30_20539_c1_147_998 278
199 3300053077 Ga0495601_0043864 Ga0495601_0043864_1893_2747 278
200 3300053078 Ga0495612_0009116 Ga0495612_0009116_1442_2296 278
201 3300053131 Ga0500652_000429 Ga0500652_000429_3934_4785 278
202 3300053161 Ga0500634_0000087 Ga0500634_0000087_22862_23713 278
203 3300003203 JGI25406J46586_10003672 JGI25406J46586_100036722 279
204 3300005985 Ga0081539_10001242 Ga0081539_1000124219 279
205 3300046474 Ga0495605_0024831 Ga0495605_0024831_646_1491 279
206 3300048925 Ga0496122_0006140 Ga0496122_0006140_9582_10445 279
207 3300048926 Ga0496123_0001102 Ga0496123_0001102_26321_27184 279
208 3300053104 Ga0500556_0000428 Ga0500556_0000428_2723_3586 279

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00398

RrnaAD

Ribosomal RNA adenine dimethylase

18

270

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pnt-assembly1.cif.gz_c assembly intermediate of mouse mitochondrial ribosome small subunit without ms37 in complex with rbfa and tfb1m 0.9365 25 273
6aax-assembly1.cif.gz_A crystal structure of tfb1m and h45 with sam in homo sapiens 0.9313 25 271
3tqs-assembly2.cif.gz_B structure of the dimethyladenosine transferase (ksga) from coxiella burnetii 0.9259 25 275
4jxj-assembly1.cif.gz_A crystal structure of ribosomal rna small subunit methyltransferase a from rickettsia bellii determined by iodide sad phasing 0.9241 26 274
3tqs-assembly2.cif.gz_B structure of the dimethyladenosine transferase (ksga) from coxiella burnetii 0.9223 25 275
ID Description Score Start End Superfamily
af_Q54M56_2_236_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9562 5 211 3.40.50.150
4jxjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9532 26 207 3.40.50.150
4jxjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9328 26 207 3.40.50.150
af_Q58435_1_185_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9298 17 209 3.40.50.150
af_Q54QK7_28_214_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9278 18 207 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A539CV97-F1-model_v4 Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) 0.9862 3 273 GO:0003723
GO:0005829
GO:0052908
AF-A0A351T7M2-F1-model_v4 16S rRNA (Adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase 0.9828 25 201 GO:0000179
GO:0003723
GO:0005829
AF-A0A4R4GC92-F1-model_v4 deleted 0.9775 144 209
AF-A0A350LVW9-F1-model_v4 16S rRNA (Adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase 0.9736 3 234 GO:0000179
GO:0003723
GO:0005829
AF-A0A351T7M2-F1-model_v4 16S rRNA (Adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase 0.9719 25 201 GO:0000179
GO:0003723
GO:0005829

Feature Viewer

pLDDT pTM Quality
92.13 0.88 High
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Predicted Structure (AlphaFold2)

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