F317623
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 208 | 135 | 207 | 577 |
Family's Representative Sequence
| Representative Sequence | 3300006175|Ga0070712_100006367|Ga0070712_1000063676 |
| Length | 643 |
| Sequence | MQFIPISKLAKLVILALGALCAVTLPASAQSSPPAQPKSQACPNDDSDLKLPPGFCATIFADEIGHARHMVVAPSGVVYVNTWSGEYYGNDTPHAGGFLVALQDTSGGGRANVVERFGETVQSGGAGGTGIGVYKGSVFAEINDRIVRYSLAAGSLVPKDAPVTIVSGLPLGGDHPMHPFIIDANGAMYVDVASASNSCQLKNRTLKSPGADPCEELETRGGIWRYDATKTNQAFSKADRFATGIRNGEGFAIDAGGHLFVTQHGRDQLHTNWPDFYKPDQEATLPAEELVLLQQGGDYGWPECYYDPFVKKLVLAPEYGGDGKKAGLCASKLAPAAAFPAHWAPNGMVHYDGKEFPKHYRDGVFIAFHGSWNRAPYPQGGYNVVFQPMAGGRASGQCEIFADGFAGAVKSPDKAVHRPSGLAVGPDGALYVSDDVRGRIYRIAYRGGAVGDAAGVTLCPSATAPAGEIVAGPTGPPEGTHPDAGAAAALPEGATPEMVALGERIYRGQVGGAACTGCHGDKGQGSSLGPDLTGKKWLWSDGSYAGIKKTISEGVSQPKNYRSPMPAMGGAQLTADQVSALAAYVWSISHQRTATPDSHSALPIELAIPGQRIPGHADHPFRGDGDHDSGMMPITRSGVIPIS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237141 | Bradyrhizobium sp. TV2a.2 | Isolate | Nodule |
| 2 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 3 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 4 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 5 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 6 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 9 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 10 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 14 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 18 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 20 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 21 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 22 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 23 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 24 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 25 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 26 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 27 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 28 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 29 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 32 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 34 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 35 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 51 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028016 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 | Metagenome | Rhizosphere |
| 73 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 75 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 76 | 3300030760 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 77 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 78 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 79 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 80 | 3300033545 | Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 | Metagenome | Unclassified |
| 81 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 82 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 83 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 84 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 85 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 86 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 87 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 88 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 89 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 90 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 91 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 92 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 93 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 94 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 95 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 96 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 106 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 107 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 108 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 109 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 110 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 113 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 114 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 115 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 116 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 134 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 135 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.56 |
| Metatranscriptomes | 0.96 |
| Isolates | 0.48 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.96 |
| Nodule | 0.48 |
| Rhizoplane | 6.25 |
| Rhizosphere | 87.5 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.81 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070680_100014178 | 3300005336 | Bacteria | 6226 |
| 2 | Ga0068868_100007045 | 3300005338 | Bacteria | 7991 |
| 3 | Ga0070709_10036881 | 3300005434 | Unclassified | 2982 |
| 4 | Ga0070713_100008983 | 3300005436 | Bacteria | 7123 |
| 5 | Ga0070713_100026667 | 3300005436 | Bacteria | 4540 |
| 6 | Ga0070713_100075985 | 3300005436 | Unclassified | 2851 |
| 7 | Ga0070713_100080234 | 3300005436 | Bacteria | 2782 |
| 8 | Ga0070713_100148164 | 3300005436 | Bacteria | 2085 |
| 9 | Ga0070711_100000701 | 3300005439 | Bacteria | 17555 |
| 10 | Ga0070711_100010056 | 3300005439 | Bacteria | 5842 |
| 11 | Ga0070694_100061370 | 3300005444 | Bacteria | 2566 |
| 12 | Ga0070681_10000091 | 3300005458 | Bacteria | 67429 |
| 13 | Ga0070681_10003640 | 3300005458 | Bacteria | 14460 |
| 14 | Ga0070681_10056716 | 3300005458 | Bacteria | 3898 |
| 15 | Ga0068867_100003889 | 3300005459 | Bacteria | 10507 |
| 16 | Ga0070706_100078017 | 3300005467 | Bacteria | 3066 |
| 17 | Ga0070698_100043027 | 3300005471 | Bacteria | 4631 |
| 18 | Ga0070679_100003033 | 3300005530 | Bacteria | 15341 |
| 19 | Ga0070679_100003555 | 3300005530 | Bacteria | 14279 |
| 20 | Ga0070684_100011488 | 3300005535 | Bacteria | 7053 |
| 21 | Ga0070695_100050317 | 3300005545 | Bacteria | 2670 |
| 22 | Ga0070696_100002671 | 3300005546 | Bacteria | 11811 |
| 23 | Ga0070665_100014558 | 3300005548 | Bacteria | 7893 |
| 24 | Ga0070665_100100742 | 3300005548 | Unclassified | 2893 |
| 25 | Ga0068855_100001406 | 3300005563 | Bacteria | 29877 |
| 26 | Ga0068855_100002815 | 3300005563 | Bacteria | 21413 |
| 27 | Ga0068855_100004723 | 3300005563 | Bacteria | 16638 |
| 28 | Ga0068855_100031786 | 3300005563 | Bacteria | 6301 |
| 29 | Ga0070664_100011156 | 3300005564 | Bacteria | 7288 |
| 30 | Ga0068857_100008911 | 3300005577 | Bacteria | 8691 |
| 31 | Ga0068857_100009293 | 3300005577 | Bacteria | 8531 |
| 32 | Ga0068854_100006991 | 3300005578 | Bacteria | 7197 |
| 33 | Ga0068856_100000685 | 3300005614 | Bacteria | 36811 |
| 34 | Ga0068856_100000967 | 3300005614 | Bacteria | 30639 |
| 35 | Ga0068856_100001014 | 3300005614 | Bacteria | 29891 |
| 36 | Ga0068859_100005340 | 3300005617 | Bacteria | 13074 |
| 37 | Ga0068859_100031119 | 3300005617 | Bacteria | 5356 |
| 38 | Ga0068864_100003000 | 3300005618 | Bacteria | 13946 |
| 39 | Ga0068864_100004329 | 3300005618 | Bacteria | 11657 |
| 40 | Ga0068864_100008149 | 3300005618 | Bacteria | 8642 |
| 41 | Ga0068866_10003188 | 3300005718 | Bacteria | 6754 |
| 42 | Ga0068863_100000515 | 3300005841 | Bacteria | 39374 |
| 43 | Ga0068863_100014009 | 3300005841 | Bacteria | 7726 |
| 44 | Ga0068863_100124673 | 3300005841 | Bacteria | 2457 |
| 45 | Ga0068858_100003636 | 3300005842 | Bacteria | 15256 |
| 46 | Ga0068858_100005348 | 3300005842 | Bacteria | 12595 |
| 47 | Ga0068858_100012753 | 3300005842 | Bacteria | 7921 |
| 48 | Ga0068860_100004280 | 3300005843 | Bacteria | 14595 |
| 49 | Ga0068860_100004314 | 3300005843 | Bacteria | 14543 |
| 50 | Ga0068860_100016304 | 3300005843 | Bacteria | 7245 |
| 51 | Ga0081540_1025672 | 3300005983 | Bacteria | 3384 |
| 52 | Ga0070717_10000763 | 3300006028 | Bacteria | 21033 |
| 53 | Ga0070716_100014654 | 3300006173 | Bacteria | 4020 |
| 54 | Ga0070716_100024705 | 3300006173 | Bacteria | 3200 |
| 55 | Ga0070716_100051084 | 3300006173 | Bacteria | 2349 |
| 56 | Ga0070712_100000334 | 3300006175 | Bacteria | 26812 |
| 57 | Ga0070712_100006367 | 3300006175 | Bacteria | 7321 |
| 58 | Ga0097621_100000127 | 3300006237 | Bacteria | 44332 |
| 59 | Ga0097621_100001799 | 3300006237 | Bacteria | 14719 |
| 60 | Ga0068871_100000261 | 3300006358 | Bacteria | 36328 |
| 61 | Ga0068871_100000279 | 3300006358 | Bacteria | 35392 |
| 62 | Ga0068871_100003454 | 3300006358 | Bacteria | 10856 |
| 63 | Ga0068871_100003807 | 3300006358 | Bacteria | 10400 |
| 64 | Ga0068871_100077148 | 3300006358 | Bacteria | 2753 |
| 65 | Ga0075436_100054120 | 3300006914 | Bacteria | 2770 |
| 66 | Ga0097620_100005340 | 3300006931 | Bacteria | 13074 |
| 67 | Ga0105240_10001253 | 3300009093 | Bacteria | 44068 |
| 68 | Ga0105240_10005153 | 3300009093 | Bacteria | 19546 |
| 69 | Ga0105240_10033483 | 3300009093 | Bacteria | 6638 |
| 70 | Ga0105245_10136842 | 3300009098 | Bacteria | 2303 |
| 71 | Ga0105241_10006211 | 3300009174 | Bacteria | 8812 |
| 72 | Ga0105241_10016650 | 3300009174 | Bacteria | 5395 |
| 73 | Ga0105248_10016121 | 3300009177 | Bacteria | 8223 |
| 74 | Ga0105238_10000143 | 3300009551 | Bacteria | 78219 |
| 75 | Ga0105239_10029780 | 3300010375 | Bacteria | 6003 |
| 76 | Ga0157373_10030930 | 3300013100 | Bacteria | 3852 |
| 77 | Ga0157369_10000102 | 3300013105 | Bacteria | 118470 |
| 78 | Ga0157374_10001072 | 3300013296 | Bacteria | 23720 |
| 79 | Ga0157374_10001849 | 3300013296 | Bacteria | 17815 |
| 80 | Ga0157378_10000212 | 3300013297 | Bacteria | 55989 |
| 81 | Ga0157378_10000254 | 3300013297 | Bacteria | 52323 |
| 82 | Ga0157378_10000257 | 3300013297 | Bacteria | 52147 |
| 83 | Ga0157378_10001294 | 3300013297 | Bacteria | 22533 |
| 84 | Ga0163162_10000984 | 3300013306 | Bacteria | 26506 |
| 85 | Ga0157372_10000322 | 3300013307 | Bacteria | 52659 |
| 86 | Ga0157372_10000340 | 3300013307 | Bacteria | 51471 |
| 87 | Ga0157372_10024148 | 3300013307 | Bacteria | 6598 |
| 88 | Ga0157372_10114394 | 3300013307 | Bacteria | 3093 |
| 89 | Ga0157379_10000116 | 3300014968 | Bacteria | 55439 |
| 90 | Ga0157376_10012081 | 3300014969 | Bacteria | 6393 |
| 91 | Ga0157376_10012415 | 3300014969 | Bacteria | 6323 |
| 92 | Ga0157376_10077106 | 3300014969 | Bacteria | 2850 |
| 93 | Ga0213876_10000108 | 3300021384 | Bacteria | 91222 |
| 94 | Ga0207642_10020638 | 3300025899 | Unclassified | 2577 |
| 95 | Ga0207707_10000127 | 3300025912 | Bacteria | 78669 |
| 96 | Ga0207695_10009738 | 3300025913 | Bacteria | 11828 |
| 97 | Ga0207695_10013104 | 3300025913 | Bacteria | 9899 |
| 98 | Ga0207695_10022180 | 3300025913 | Bacteria | 7220 |
| 99 | Ga0207671_10045979 | 3300025914 | Bacteria | 3228 |
| 100 | Ga0207693_10000256 | 3300025915 | Bacteria | 48996 |
| 101 | Ga0207693_10005979 | 3300025915 | Bacteria | 10098 |
| 102 | Ga0207693_10059236 | 3300025915 | Bacteria | 2999 |
| 103 | Ga0207693_10111258 | 3300025915 | Bacteria | 2148 |
| 104 | Ga0207663_10013384 | 3300025916 | Unclassified | 4458 |
| 105 | Ga0207663_10026589 | 3300025916 | Bacteria | 3361 |
| 106 | Ga0207652_10053405 | 3300025921 | Unclassified | 3471 |
| 107 | Ga0207694_10016041 | 3300025924 | Bacteria | 5651 |
| 108 | Ga0207700_10014373 | 3300025928 | Bacteria | 5185 |
| 109 | Ga0207700_10106595 | 3300025928 | Bacteria | 2247 |
| 110 | Ga0207665_10041286 | 3300025939 | Bacteria | 3080 |
| 111 | Ga0207661_10017911 | 3300025944 | Bacteria | 5253 |
| 112 | Ga0207661_10032806 | 3300025944 | Bacteria | 4027 |
| 113 | Ga0207679_10007541 | 3300025945 | Bacteria | 6905 |
| 114 | Ga0207679_10013152 | 3300025945 | Bacteria | 5420 |
| 115 | Ga0207667_10000606 | 3300025949 | Bacteria | 46386 |
| 116 | Ga0207667_10003248 | 3300025949 | Bacteria | 20059 |
| 117 | Ga0207667_10012585 | 3300025949 | Bacteria | 9733 |
| 118 | Ga0207667_10013696 | 3300025949 | Bacteria | 9268 |
| 119 | Ga0207640_10004176 | 3300025981 | Bacteria | 7811 |
| 120 | Ga0207677_10010005 | 3300026023 | Bacteria | 5352 |
| 121 | Ga0207703_10005156 | 3300026035 | Bacteria | 10563 |
| 122 | Ga0207703_10049374 | 3300026035 | Bacteria | 3402 |
| 123 | Ga0207703_10075116 | 3300026035 | Unclassified | 2800 |
| 124 | Ga0207702_10000427 | 3300026078 | Bacteria | 48314 |
| 125 | Ga0207641_10000759 | 3300026088 | Bacteria | 34711 |
| 126 | Ga0207641_10011545 | 3300026088 | Bacteria | 7250 |
| 127 | Ga0207648_10007430 | 3300026089 | Bacteria | 10780 |
| 128 | Ga0207676_10021900 | 3300026095 | Bacteria | 4695 |
| 129 | Ga0207676_10037768 | 3300026095 | Bacteria | 3682 |
| 130 | Ga0207674_10001943 | 3300026116 | Bacteria | 26232 |
| 131 | Ga0207674_10009451 | 3300026116 | Bacteria | 11140 |
| 132 | Ga0265354_1000208 | 3300028016 | Bacteria | 10825 |
| 133 | Ga0268264_10000008 | 3300028381 | Bacteria | 773387 |
| 134 | Ga0268264_10011582 | 3300028381 | Bacteria | 7279 |
| 135 | Ga0268264_10012151 | 3300028381 | Bacteria | 7088 |
| 136 | Ga0307515_10049743 | 3300028794 | Bacteria | 6296 |
| 137 | Ga0265338_10124953 | 3300028800 | Bacteria | 2043 |
| 138 | Ga0265762_1000748 | 3300030760 | Bacteria | 5797 |
| 139 | Ga0265760_10004188 | 3300031090 | Bacteria | 4151 |
| 140 | Ga0265331_10011645 | 3300031250 | Bacteria | 4809 |
| 141 | Ga0307516_10000131 | 3300031730 | Bacteria | 89180 |
| 142 | Ga0316214_1001023 | 3300033545 | Bacteria | 3120 |
| 143 | Ga0373954_0000189 | 3300035118 | Bacteria | 22316 |
| 144 | Ga0373956_0000794 | 3300035119 | Bacteria | 13119 |
| 145 | Ga0373955_0000259 | 3300035172 | Bacteria | 22026 |
| 146 | Ga0373935_0075336 | 3300035692 | Bacteria | 2183 |
| 147 | Ga0373933_0000275 | 3300035724 | Bacteria | 33474 |
| 148 | Ga0373937_0000123 | 3300036401 | Bacteria | 74156 |
| 149 | Ga0373937_0107415 | 3300036401 | Bacteria | 2595 |
| 150 | Ga0373925_0037223 | 3300037068 | Unclassified | 3592 |
| 151 | Ga0395905_0061832 | 3300037471 | Bacteria | 3503 |
| 152 | Ga0436365_1544656 | 3300039437 | Bacteria | 122419 |
| 153 | Ga0436365_1624482 | 3300039437 | Bacteria | 5888 |
| 154 | Ga0436363_1562017 | 3300039450 | Bacteria | 4609 |
| 155 | Ga0453683_0000215 | 3300044673 | Bacteria | 76688 |
| 156 | Ga0466966_0053240 | 3300044684 | Bacteria | 2568 |
| 157 | Ga0453684_0175520 | 3300044712 | Bacteria | 2521 |
| 158 | Ga0451576_0039459 | 3300045051 | Unclassified | 4997 |
| 159 | Ga0466967_0126827 | 3300045976 | Bacteria | 2365 |
| 160 | Ga0495592_0070600 | 3300046454 | Bacteria | 2544 |
| 161 | Ga0495580_0008577 | 3300046472 | Bacteria | 8110 |
| 162 | Ga0495580_0028516 | 3300046472 | Unclassified | 4058 |
| 163 | Ga0495628_0069244 | 3300046516 | Bacteria | 2752 |
| 164 | Ga0495587_0000303 | 3300046536 | Bacteria | 35065 |
| 165 | Ga0495587_0029249 | 3300046536 | Bacteria | 3345 |
| 166 | Ga0495668_0012111 | 3300046616 | Bacteria | 5130 |
| 167 | Ga0495600_0082897 | 3300046809 | Bacteria | 2093 |
| 168 | Ga0495604_0000176 | 3300047317 | Bacteria | 56911 |
| 169 | Ga0495684_0012554 | 3300047471 | Bacteria | 6532 |
| 170 | Ga0495602_0000362 | 3300048088 | Bacteria | 42468 |
| 171 | Ga0496101_0088075 | 3300048904 | Bacteria | 2305 |
| 172 | Ga0496102_0000464 | 3300048905 | Bacteria | 45016 |
| 173 | Ga0496102_0007826 | 3300048905 | Bacteria | 9136 |
| 174 | Ga0496103_0001716 | 3300048906 | Bacteria | 14327 |
| 175 | Ga0496104_0004840 | 3300048907 | Bacteria | 11736 |
| 176 | Ga0496104_0079905 | 3300048907 | Bacteria | 3117 |
| 177 | Ga0496105_0013885 | 3300048908 | Bacteria | 6399 |
| 178 | Ga0496106_0042133 | 3300048909 | Bacteria | 3423 |
| 179 | Ga0496112_0001191 | 3300048915 | Bacteria | 19489 |
| 180 | Ga0496112_0118467 | 3300048915 | Bacteria | 2618 |
| 181 | Ga0496112_0228001 | 3300048915 | Bacteria | 1818 |
| 182 | Ga0496114_0030131 | 3300048917 | Bacteria | 4463 |
| 183 | Ga0496115_0113514 | 3300048918 | Bacteria | 2226 |
| 184 | Ga0496121_0015666 | 3300048924 | Bacteria | 7910 |
| 185 | Ga0496126_0004236 | 3300048929 | Bacteria | 17266 |
| 186 | Ga0496126_0006337 | 3300048929 | Bacteria | 13201 |
| 187 | Ga0501032_0018713 | 3300049569 | Bacteria | 4848 |
| 188 | Ga0501034_0000391 | 3300049571 | Bacteria | 74631 |
| 189 | Ga0501036_0096791 | 3300049572 | Bacteria | 2495 |
| 190 | Ga0501037_0017008 | 3300049573 | Bacteria | 5351 |
| 191 | Ga0501039_0000070 | 3300049575 | Bacteria | 77967 |
| 192 | Ga0501046_0044153 | 3300049580 | Bacteria | 3545 |
| 193 | Ga0501047_0000102 | 3300049581 | Bacteria | 104950 |
| 194 | Ga0501067_0000197 | 3300049583 | Bacteria | 34015 |
| 195 | Ga0501067_0013006 | 3300049583 | Bacteria | 4608 |
| 196 | Ga0501070_0011111 | 3300049586 | Bacteria | 7599 |
| 197 | Ga0501080_0000028 | 3300049742 | Bacteria | 88948 |
| 198 | Ga0501035_0000020 | 3300049822 | Bacteria | 221605 |
| 199 | Ga0501044_0000007 | 3300049823 | Bacteria | 283429 |
| 200 | nmdc:mga05p37_66739_c1 | 3300050507 | Unclassified | 4425 |
| 201 | nmdc:mga0n895_72012_c1 | 3300050512 | Unclassified | 3428 |
| 202 | nmdc:mga0a205_2638_c2 | 3300050515 | Bacteria | 14583 |
| 203 | Ga0495601_0011596 | 3300053077 | Bacteria | 5282 |
| 204 | Ga0495619_0035207 | 3300053085 | Unclassified | 3256 |
| 205 | Ga0500556_0001114 | 3300053104 | Bacteria | 13326 |
| 206 | Ga0500616_0005490 | 3300053153 | Bacteria | 8602 |
| 207 | Ga0501082_0027972 | 3300060353 | Bacteria | 4857 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005436 | Ga0070713_100026667 | Ga0070713_1000266671 | 488 |
| 2 | 3300048915 | Ga0496112_0228001 | Ga0496112_0228001_181_1800 | 489 |
| 3 | 3300044673 | Ga0453683_0000215 | Ga0453683_0000215_6914_8572 | 494 |
| 4 | 3300044712 | Ga0453684_0175520 | Ga0453684_0175520_682_2340 | 496 |
| 5 | 3300045051 | Ga0451576_0039459 | Ga0451576_0039459_243_1901 | 496 |
| 6 | 3300039437 | Ga0436365_1544656 | Ga0436365_1544656_41674_43338 | 499 |
| 7 | 3300039450 | Ga0436363_1562017 | Ga0436363_1562017_2259_3923 | 499 |
| 8 | 3300046472 | Ga0495580_0008577 | Ga0495580_0008577_991_2694 | 500 |
| 9 | 3300028794 | Ga0307515_10049743 | Ga0307515_100497433 | 501 |
| 10 | 3300025915 | Ga0207693_10059236 | Ga0207693_100592362 | 503 |
| 11 | 3300046809 | Ga0495600_0082897 | Ga0495600_0082897_446_2023 | 510 |
| 12 | 3300013306 | Ga0163162_10000984 | Ga0163162_100009845 | 511 |
| 13 | 3300053085 | Ga0495619_0035207 | Ga0495619_0035207_1585_3159 | 511 |
| 14 | 3300025915 | Ga0207693_10111258 | Ga0207693_101112581 | 518 |
| 15 | 3300006358 | Ga0068871_100003807 | Ga0068871_1000038075 | 520 |
| 16 | 3300014969 | Ga0157376_10077106 | Ga0157376_100771063 | 520 |
| 17 | 3300021384 | Ga0213876_10000108 | Ga0213876_1000010862 | 520 |
| 18 | 3300045976 | Ga0466967_0126827 | Ga0466967_0126827_54_1667 | 520 |
| 19 | 3300048917 | Ga0496114_0030131 | Ga0496114_0030131_1424_3079 | 520 |
| 20 | 3300009174 | Ga0105241_10016650 | Ga0105241_100166503 | 525 |
| 21 | 3300035692 | Ga0373935_0075336 | Ga0373935_0075336_478_2133 | 525 |
| 22 | 3300037068 | Ga0373925_0037223 | Ga0373925_0037223_757_2412 | 525 |
| 23 | 3300048904 | Ga0496101_0088075 | Ga0496101_0088075_562_2217 | 525 |
| 24 | 3300048907 | Ga0496104_0079905 | Ga0496104_0079905_109_1764 | 525 |
| 25 | 3300048918 | Ga0496115_0113514 | Ga0496115_0113514_368_2023 | 525 |
| 26 | 3300039437 | Ga0436365_1624482 | Ga0436365_1624482_2603_4351 | 527 |
| 27 | 3300005843 | Ga0068860_100004280 | Ga0068860_10000428013 | 529 |
| 28 | 3300026095 | Ga0207676_10037768 | Ga0207676_100377682 | 529 |
| 29 | 3300028381 | Ga0268264_10000008 | Ga0268264_10000008626 | 529 |
| 30 | 3300005618 | Ga0068864_100008149 | Ga0068864_1000081496 | 530 |
| 31 | 3300005841 | Ga0068863_100000515 | Ga0068863_10000051515 | 530 |
| 32 | 3300026088 | Ga0207641_10000759 | Ga0207641_1000075914 | 530 |
| 33 | 3300053104 | Ga0500556_0001114 | Ga0500556_0001114_4591_6357 | 530 |
| 34 | 3300048924 | Ga0496121_0015666 | Ga0496121_0015666_411_2111 | 531 |
| 35 | 3300005458 | Ga0070681_10056716 | Ga0070681_100567161 | 535 |
| 36 | 3300005458 | Ga0070681_10000091 | Ga0070681_1000009156 | 538 |
| 37 | 3300005530 | Ga0070679_100003555 | Ga0070679_1000035558 | 538 |
| 38 | 3300005563 | Ga0068855_100001406 | Ga0068855_10000140611 | 538 |
| 39 | 3300005577 | Ga0068857_100008911 | Ga0068857_1000089111 | 538 |
| 40 | 3300005614 | Ga0068856_100001014 | Ga0068856_10000101411 | 538 |
| 41 | 3300005842 | Ga0068858_100003636 | Ga0068858_1000036363 | 538 |
| 42 | 3300006237 | Ga0097621_100000127 | Ga0097621_10000012731 | 538 |
| 43 | 3300006358 | Ga0068871_100000279 | Ga0068871_10000027916 | 538 |
| 44 | 3300009093 | Ga0105240_10001253 | Ga0105240_1000125326 | 538 |
| 45 | 3300009174 | Ga0105241_10006211 | Ga0105241_100062114 | 538 |
| 46 | 3300009551 | Ga0105238_10000143 | Ga0105238_1000014359 | 538 |
| 47 | 3300013105 | Ga0157369_10000102 | Ga0157369_1000010244 | 538 |
| 48 | 3300013296 | Ga0157374_10001849 | Ga0157374_100018492 | 538 |
| 49 | 3300013297 | Ga0157378_10001294 | Ga0157378_100012948 | 538 |
| 50 | 3300013307 | Ga0157372_10000340 | Ga0157372_1000034014 | 538 |
| 51 | 3300025912 | Ga0207707_10000127 | Ga0207707_1000012726 | 538 |
| 52 | 3300025913 | Ga0207695_10009738 | Ga0207695_100097385 | 538 |
| 53 | 3300025921 | Ga0207652_10053405 | Ga0207652_100534052 | 538 |
| 54 | 3300025944 | Ga0207661_10017911 | Ga0207661_100179113 | 538 |
| 55 | 3300025949 | Ga0207667_10000606 | Ga0207667_100006068 | 538 |
| 56 | 3300026035 | Ga0207703_10075116 | Ga0207703_100751162 | 538 |
| 57 | 3300026078 | Ga0207702_10000427 | Ga0207702_1000042712 | 538 |
| 58 | 3300026116 | Ga0207674_10009451 | Ga0207674_100094516 | 538 |
| 59 | 3300048915 | Ga0496112_0001191 | Ga0496112_0001191_4398_6176 | 538 |
| 60 | 3300049580 | Ga0501046_0044153 | Ga0501046_0044153_1210_2967 | 540 |
| 61 | 3300005530 | Ga0070679_100003033 | Ga0070679_1000030335 | 542 |
| 62 | 3300048929 | Ga0496126_0004236 | Ga0496126_0004236_15391_17070 | 542 |
| 63 | 3300010375 | Ga0105239_10029780 | Ga0105239_100297803 | 544 |
| 64 | 3300005548 | Ga0070665_100014558 | Ga0070665_1000145587 | 547 |
| 65 | 3300053153 | Ga0500616_0005490 | Ga0500616_0005490_6829_8580 | 548 |
| 66 | 3300005436 | Ga0070713_100080234 | Ga0070713_1000802343 | 550 |
| 67 | 3300025928 | Ga0207700_10106595 | Ga0207700_101065951 | 550 |
| 68 | iso_pu_bacteria | 2513237141 | 2513888436 | 550 |
| 69 | 3300046616 | Ga0495668_0012111 | Ga0495668_0012111_535_2268 | 552 |
| 70 | 3300025924 | Ga0207694_10016041 | Ga0207694_100160412 | 553 |
| 71 | 3300014969 | Ga0157376_10012415 | Ga0157376_100124156 | 554 |
| 72 | 3300046516 | Ga0495628_0069244 | Ga0495628_0069244_201_1901 | 554 |
| 73 | 3300050507 | nmdc:mga05p37_66739_c1 | nmdc:mga05p37_66739_c1_835_2538 | 554 |
| 74 | 3300050512 | nmdc:mga0n895_72012_c1 | nmdc:mga0n895_72012_c1_1510_3213 | 554 |
| 75 | 3300050515 | nmdc:mga0a205_2638_c2 | nmdc:mga0a205_2638_c2_11818_13521 | 554 |
| 76 | 3300053077 | Ga0495601_0011596 | Ga0495601_0011596_1971_3671 | 554 |
| 77 | 3300005843 | Ga0068860_100016304 | Ga0068860_1000163042 | 555 |
| 78 | 3300005983 | Ga0081540_1025672 | Ga0081540_10256721 | 555 |
| 79 | 3300013297 | Ga0157378_10000212 | Ga0157378_100002126 | 555 |
| 80 | 3300025899 | Ga0207642_10020638 | Ga0207642_100206382 | 555 |
| 81 | 3300028381 | Ga0268264_10012151 | Ga0268264_100121512 | 555 |
| 82 | 3300048905 | Ga0496102_0007826 | Ga0496102_0007826_733_2520 | 555 |
| 83 | 3300025914 | Ga0207671_10045979 | Ga0207671_100459791 | 556 |
| 84 | 3300036401 | Ga0373937_0107415 | Ga0373937_0107415_164_1927 | 557 |
| 85 | 3300046472 | Ga0495580_0028516 | Ga0495580_0028516_1848_3611 | 557 |
| 86 | 3300033545 | Ga0316214_1001023 | Ga0316214_10010232 | 558 |
| 87 | 3300009093 | Ga0105240_10033483 | Ga0105240_100334832 | 559 |
| 88 | 3300025913 | Ga0207695_10022180 | Ga0207695_100221803 | 559 |
| 89 | 3300028800 | Ga0265338_10124953 | Ga0265338_101249531 | 559 |
| 90 | 3300031250 | Ga0265331_10011645 | Ga0265331_100116454 | 559 |
| 91 | 3300005434 | Ga0070709_10036881 | Ga0070709_100368812 | 561 |
| 92 | 3300044684 | Ga0466966_0053240 | Ga0466966_0053240_106_1806 | 561 |
| 93 | 3300005439 | Ga0070711_100010056 | Ga0070711_1000100562 | 562 |
| 94 | 3300006173 | Ga0070716_100014654 | Ga0070716_1000146544 | 562 |
| 95 | 3300048908 | Ga0496105_0013885 | Ga0496105_0013885_4430_6214 | 562 |
| 96 | 3300049569 | Ga0501032_0018713 | Ga0501032_0018713_2958_4724 | 562 |
| 97 | 3300049571 | Ga0501034_0000391 | Ga0501034_0000391_36411_38177 | 562 |
| 98 | 3300049572 | Ga0501036_0096791 | Ga0501036_0096791_531_2297 | 562 |
| 99 | 3300049573 | Ga0501037_0017008 | Ga0501037_0017008_1193_2959 | 562 |
| 100 | 3300049575 | Ga0501039_0000070 | Ga0501039_0000070_66902_68668 | 562 |
| 101 | 3300049581 | Ga0501047_0000102 | Ga0501047_0000102_1607_3373 | 562 |
| 102 | 3300049583 | Ga0501067_0000197 | Ga0501067_0000197_21268_23034 | 562 |
| 103 | 3300049583 | Ga0501067_0013006 | Ga0501067_0013006_174_1931 | 562 |
| 104 | 3300049586 | Ga0501070_0011111 | Ga0501070_0011111_59_1825 | 562 |
| 105 | 3300049742 | Ga0501080_0000028 | Ga0501080_0000028_55814_57580 | 562 |
| 106 | 3300049822 | Ga0501035_0000020 | Ga0501035_0000020_38985_40751 | 562 |
| 107 | 3300049823 | Ga0501044_0000007 | Ga0501044_0000007_140816_142582 | 562 |
| 108 | 3300060353 | Ga0501082_0027972 | Ga0501082_0027972_1317_3083 | 562 |
| 109 | 3300013307 | Ga0157372_10114394 | Ga0157372_101143942 | 563 |
| 110 | 3300013297 | Ga0157378_10000254 | Ga0157378_1000025431 | 564 |
| 111 | 3300013307 | Ga0157372_10024148 | Ga0157372_100241482 | 564 |
| 112 | 3300005436 | Ga0070713_100148164 | Ga0070713_1001481641 | 565 |
| 113 | 3300006358 | Ga0068871_100000261 | Ga0068871_10000026118 | 565 |
| 114 | 3300006914 | Ga0075436_100054120 | Ga0075436_1000541202 | 565 |
| 115 | 3300009177 | Ga0105248_10016121 | Ga0105248_100161218 | 565 |
| 116 | 3300014969 | Ga0157376_10012081 | Ga0157376_100120813 | 565 |
| 117 | 3300005444 | Ga0070694_100061370 | Ga0070694_1000613703 | 567 |
| 118 | 3300005467 | Ga0070706_100078017 | Ga0070706_1000780172 | 567 |
| 119 | 3300005471 | Ga0070698_100043027 | Ga0070698_1000430273 | 567 |
| 120 | 3300025916 | Ga0207663_10026589 | Ga0207663_100265893 | 568 |
| 121 | 3300037471 | Ga0395905_0061832 | Ga0395905_0061832_797_2575 | 569 |
| 122 | 3300048929 | Ga0496126_0006337 | Ga0496126_0006337_11201_12970 | 569 |
| 123 | 3300005563 | Ga0068855_100002815 | Ga0068855_1000028155 | 570 |
| 124 | 3300009093 | Ga0105240_10005153 | Ga0105240_100051536 | 570 |
| 125 | 3300025913 | Ga0207695_10013104 | Ga0207695_100131047 | 570 |
| 126 | 3300025949 | Ga0207667_10003248 | Ga0207667_100032485 | 570 |
| 127 | 3300030760 | Ga0265762_1000748 | Ga0265762_10007482 | 572 |
| 128 | 3300031090 | Ga0265760_10004188 | Ga0265760_100041883 | 572 |
| 129 | 3300005338 | Ga0068868_100007045 | Ga0068868_1000070453 | 573 |
| 130 | 3300005458 | Ga0070681_10003640 | Ga0070681_100036405 | 573 |
| 131 | 3300005459 | Ga0068867_100003889 | Ga0068867_1000038895 | 573 |
| 132 | 3300005535 | Ga0070684_100011488 | Ga0070684_1000114884 | 573 |
| 133 | 3300005563 | Ga0068855_100004723 | Ga0068855_1000047235 | 573 |
| 134 | 3300005563 | Ga0068855_100031786 | Ga0068855_1000317862 | 573 |
| 135 | 3300005564 | Ga0070664_100011156 | Ga0070664_1000111564 | 573 |
| 136 | 3300005577 | Ga0068857_100009293 | Ga0068857_1000092932 | 573 |
| 137 | 3300005578 | Ga0068854_100006991 | Ga0068854_1000069911 | 573 |
| 138 | 3300005614 | Ga0068856_100000685 | Ga0068856_1000006851 | 573 |
| 139 | 3300005614 | Ga0068856_100000967 | Ga0068856_1000009674 | 573 |
| 140 | 3300005617 | Ga0068859_100005340 | Ga0068859_1000053403 | 573 |
| 141 | 3300005618 | Ga0068864_100003000 | Ga0068864_1000030008 | 573 |
| 142 | 3300005618 | Ga0068864_100004329 | Ga0068864_1000043296 | 573 |
| 143 | 3300005718 | Ga0068866_10003188 | Ga0068866_100031883 | 573 |
| 144 | 3300005841 | Ga0068863_100014009 | Ga0068863_1000140092 | 573 |
| 145 | 3300005841 | Ga0068863_100124673 | Ga0068863_1001246733 | 573 |
| 146 | 3300005842 | Ga0068858_100005348 | Ga0068858_1000053483 | 573 |
| 147 | 3300005842 | Ga0068858_100012753 | Ga0068858_1000127531 | 573 |
| 148 | 3300005843 | Ga0068860_100004314 | Ga0068860_1000043146 | 573 |
| 149 | 3300006237 | Ga0097621_100001799 | Ga0097621_1000017991 | 573 |
| 150 | 3300006358 | Ga0068871_100003454 | Ga0068871_1000034545 | 573 |
| 151 | 3300006931 | Ga0097620_100005340 | Ga0097620_1000053403 | 573 |
| 152 | 3300013100 | Ga0157373_10030930 | Ga0157373_100309302 | 573 |
| 153 | 3300013296 | Ga0157374_10001072 | Ga0157374_100010728 | 573 |
| 154 | 3300013297 | Ga0157378_10000257 | Ga0157378_100002579 | 573 |
| 155 | 3300013307 | Ga0157372_10000322 | Ga0157372_1000032235 | 573 |
| 156 | 3300025944 | Ga0207661_10032806 | Ga0207661_100328062 | 573 |
| 157 | 3300025945 | Ga0207679_10007541 | Ga0207679_100075413 | 573 |
| 158 | 3300025945 | Ga0207679_10013152 | Ga0207679_100131521 | 573 |
| 159 | 3300025949 | Ga0207667_10012585 | Ga0207667_100125856 | 573 |
| 160 | 3300025949 | Ga0207667_10013696 | Ga0207667_100136962 | 573 |
| 161 | 3300025981 | Ga0207640_10004176 | Ga0207640_100041765 | 573 |
| 162 | 3300026023 | Ga0207677_10010005 | Ga0207677_100100052 | 573 |
| 163 | 3300026035 | Ga0207703_10005156 | Ga0207703_100051564 | 573 |
| 164 | 3300026035 | Ga0207703_10049374 | Ga0207703_100493742 | 573 |
| 165 | 3300026088 | Ga0207641_10011545 | Ga0207641_100115458 | 573 |
| 166 | 3300026089 | Ga0207648_10007430 | Ga0207648_100074305 | 573 |
| 167 | 3300026095 | Ga0207676_10021900 | Ga0207676_100219003 | 573 |
| 168 | 3300026116 | Ga0207674_10001943 | Ga0207674_100019438 | 573 |
| 169 | 3300028381 | Ga0268264_10011582 | Ga0268264_100115822 | 573 |
| 170 | 3300048915 | Ga0496112_0118467 | Ga0496112_0118467_135_1919 | 573 |
| 171 | 3300005436 | Ga0070713_100008983 | Ga0070713_1000089834 | 574 |
| 172 | 3300048906 | Ga0496103_0001716 | Ga0496103_0001716_11452_13221 | 574 |
| 173 | 3300005545 | Ga0070695_100050317 | Ga0070695_1000503172 | 575 |
| 174 | 3300005548 | Ga0070665_100100742 | Ga0070665_1001007421 | 575 |
| 175 | 3300005617 | Ga0068859_100031119 | Ga0068859_1000311193 | 575 |
| 176 | 3300006173 | Ga0070716_100024705 | Ga0070716_1000247052 | 575 |
| 177 | 3300006175 | Ga0070712_100006367 | Ga0070712_1000063676 | 575 |
| 178 | 3300006358 | Ga0068871_100077148 | Ga0068871_1000771482 | 575 |
| 179 | 3300009098 | Ga0105245_10136842 | Ga0105245_101368422 | 575 |
| 180 | 3300014968 | Ga0157379_10000116 | Ga0157379_1000011645 | 575 |
| 181 | 3300025915 | Ga0207693_10005979 | Ga0207693_100059794 | 575 |
| 182 | 3300025928 | Ga0207700_10014373 | Ga0207700_100143732 | 575 |
| 183 | 3300048905 | Ga0496102_0000464 | Ga0496102_0000464_15147_16919 | 575 |
| 184 | 3300048907 | Ga0496104_0004840 | Ga0496104_0004840_1032_2804 | 575 |
| 185 | 3300048909 | Ga0496106_0042133 | Ga0496106_0042133_1538_3310 | 575 |
| 186 | 3300005436 | Ga0070713_100075985 | Ga0070713_1000759851 | 576 |
| 187 | 3300005439 | Ga0070711_100000701 | Ga0070711_1000007014 | 576 |
| 188 | 3300006175 | Ga0070712_100000334 | Ga0070712_10000033426 | 576 |
| 189 | 3300025915 | Ga0207693_10000256 | Ga0207693_1000025632 | 576 |
| 190 | 3300025916 | Ga0207663_10013384 | Ga0207663_100133846 | 576 |
| 191 | 3300028016 | Ga0265354_1000208 | Ga0265354_10002083 | 576 |
| 192 | 3300031730 | Ga0307516_10000131 | Ga0307516_1000013124 | 576 |
| 193 | 3300046536 | Ga0495587_0029249 | Ga0495587_0029249_1066_2898 | 576 |
| 194 | 3300006028 | Ga0070717_10000763 | Ga0070717_1000076320 | 577 |
| 195 | 3300035118 | Ga0373954_0000189 | Ga0373954_0000189_8432_10222 | 577 |
| 196 | 3300035119 | Ga0373956_0000794 | Ga0373956_0000794_4425_6215 | 577 |
| 197 | 3300035172 | Ga0373955_0000259 | Ga0373955_0000259_2618_4408 | 577 |
| 198 | 3300035724 | Ga0373933_0000275 | Ga0373933_0000275_7700_9490 | 577 |
| 199 | 3300036401 | Ga0373937_0000123 | Ga0373937_0000123_22587_24377 | 577 |
| 200 | 3300046454 | Ga0495592_0070600 | Ga0495592_0070600_259_2049 | 577 |
| 201 | 3300046536 | Ga0495587_0000303 | Ga0495587_0000303_13371_15161 | 577 |
| 202 | 3300047317 | Ga0495604_0000176 | Ga0495604_0000176_34572_36362 | 577 |
| 203 | 3300047471 | Ga0495684_0012554 | Ga0495684_0012554_3012_4802 | 577 |
| 204 | 3300048088 | Ga0495602_0000362 | Ga0495602_0000362_13694_15484 | 577 |
| 205 | 3300005546 | Ga0070696_100002671 | Ga0070696_1000026714 | 578 |
| 206 | 3300006173 | Ga0070716_100051084 | Ga0070716_1000510841 | 578 |
| 207 | 3300025939 | Ga0207665_10041286 | Ga0207665_100412862 | 578 |
| 208 | 3300005336 | Ga0070680_100014178 | Ga0070680_1000141782 | 583 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7c90-assembly1.cif.gz_D | crystal structure of cytochrome cl from the marine methylotrophic bacterium methylophaga aminisulfidivorans mpt (ma-cytcl) | 0.8148 | 481 | 576 |
| 7c90-assembly1.cif.gz_C | crystal structure of cytochrome cl from the marine methylotrophic bacterium methylophaga aminisulfidivorans mpt (ma-cytcl) | 0.8137 | 481 | 576 |
| 6i1q-assembly1.cif.gz_A | iodide structure of trichoderma reesei carbohydrate-active enzymes family aa12 | 0.8102 | 49 | 447 |
| 6i1t-assembly1.cif.gz_A | calcium structure of trichoderma reesei carbohydrate-active enzymes family aa12 | 0.7933 | 49 | 447 |
| 6i1q-assembly1.cif.gz_A | iodide structure of trichoderma reesei carbohydrate-active enzymes family aa12 | 0.7879 | 49 | 447 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3mk7C02 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8605 | 488 | 579 | 1.10.760.10 |
| 2d0wB00 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8485 | 486 | 576 | 1.10.760.10 |
| 3a9gA00 | Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain | 0.751 | 55 | 447 | 2.120.10.30 |
| af_P75804_19_370_2.120.10.30 | Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain | 0.7486 | 51 | 447 | 2.120.10.30 |
| 2c8sA00 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.7456 | 481 | 579 | 1.10.760.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V9VPI5-F1-model_v4 | Cytochrome c domain-containing protein | 0.9908 | 493 | 583 |
GO:0009055
GO:0020037 GO:0046872 |
| AF-A0A386C9D6-F1-model_v4 | Glucose dehydrogenase | 0.9874 | 261 | 366 |
|
| AF-A0A7Y5QIY0-F1-model_v4 | C-type cytochrome | 0.9681 | 488 | 582 |
GO:0009055
GO:0020037 GO:0046872 |
| AF-A0A7X5WKV4-F1-model_v4 | deleted | 0.9671 | 515 | 581 |
|
| AF-A0A158L422-F1-model_v4 | Cytochrome c, class I | 0.9646 | 521 | 583 |
GO:0009055
GO:0020037 |
Predicted Structure (AlphaFold2)
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