F317604

General Info

Members Datasets Scaffolds Average Seq Length
208 138 416 334

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10007101|Ga0070717_100071015
Length 385
Sequence MHAMRRGAEGLGQVSAFIRRTKFWTARLTLLSTALVLLGNGAMSAQQAPNTAQANTSADEAKPATVSVDVRVVNVLATVRDKHGKIVPNLTKDDFALEEDSHPVTIGYFSRESDLPLTLGLIVDTSRSQRQVLDQERVASKTFLDQVLREKDAAFLIHFDREVELLQDLTSSREKLEEALESLRRPSPYDQDNSPETGGPADRGSNSSRGGRGRGTHGGGTALYDAIYLGSDELMKKQQGRKALIVLSDGVDRGSKESLESAIESAQRADTLVYSVLFKSEEELGERGGFGYPGRGGGRSPQEERPDGKKVLERISKETGGRFFEVSKKQPIDQIYSSIQEELRSQYSLGFTPNKADAAGYHKILLMTKQKDTAVQTRAGFYLAP

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
84 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
93 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
95 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
108 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
109 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.04
Metatranscriptomes 0.96
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.88
Rhizosphere 95.67
Stem 0
Stem Tuber 0
Unclassified 11.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10007101 3300006028 Bacteria 8298
2 Ga0070683_100214254 3300005329 Bacteria 1830
3 Ga0070683_100328100 3300005329 Bacteria 1457
4 Ga0068869_100001516 3300005334 Bacteria 13777
5 Ga0068869_100060915 3300005334 Bacteria 2767
6 Ga0070666_10060633 3300005335 Bacteria 2561
7 Ga0068868_100016870 3300005338 Bacteria 5432
8 Ga0068868_100102915 3300005338 Bacteria 2313
9 Ga0070687_100035987 3300005343 Bacteria 2463
10 Ga0070675_100076548 3300005354 Bacteria 2783
11 Ga0070671_100248577 3300005355 Bacteria 1511
12 Ga0070667_100091759 3300005367 Bacteria 2612
13 Ga0070714_100032874 3300005435 Unclassified 4333
14 Ga0070713_100060417 3300005436 Bacteria 3168
15 Ga0070708_100038763 3300005445 Bacteria 4166
16 Ga0070681_10016419 3300005458 Bacteria 7391
17 Ga0070681_10049586 3300005458 Bacteria 4192
18 Ga0070681_10074929 3300005458 Bacteria 3345
19 Ga0068867_100003041 3300005459 Bacteria 11832
20 Ga0070706_100098839 3300005467 Bacteria 2712
21 Ga0070707_100044428 3300005468 Bacteria 4254
22 Ga0070707_100167893 3300005468 Unclassified 2139
23 Ga0070684_100010795 3300005535 Bacteria 7253
24 Ga0070684_100045718 3300005535 Bacteria 3791
25 Ga0070684_100067104 3300005535 Unclassified 3150
26 Ga0070697_100004504 3300005536 Bacteria 10713
27 Ga0068853_100116361 3300005539 Bacteria 2380
28 Ga0070695_100052098 3300005545 Unclassified 2629
29 Ga0070664_100010532 3300005564 Bacteria 7495
30 Ga0068857_100050769 3300005577 Bacteria 3678
31 Ga0068856_100004181 3300005614 Bacteria 14421
32 Ga0068852_100155617 3300005616 Bacteria 2129
33 Ga0068859_100009945 3300005617 Bacteria 9596
34 Ga0068864_100132620 3300005618 Bacteria 2240
35 Ga0068866_10016074 3300005718 Bacteria 3338
36 Ga0068861_100126645 3300005719 Unclassified 2067
37 Ga0068863_100081602 3300005841 Bacteria 3063
38 Ga0068858_100007793 3300005842 Bacteria 10336
39 Ga0068858_100019256 3300005842 Bacteria 6383
40 Ga0068860_100116485 3300005843 Bacteria 2556
41 Ga0068862_100043138 3300005844 Bacteria 3845
42 Ga0070717_10002046 3300006028 Bacteria 14130
43 Ga0070716_100024258 3300006173 Bacteria 3227
44 Ga0097621_100082566 3300006237 Bacteria 2676
45 Ga0097621_100132039 3300006237 Bacteria 2127
46 Ga0097621_100251387 3300006237 Unclassified 1548
47 Ga0068871_100013059 3300006358 Bacteria 6157
48 Ga0068871_100081593 3300006358 Bacteria 2679
49 Ga0068865_100004828 3300006881 Bacteria 8146
50 Ga0068865_100005199 3300006881 Bacteria 7870
51 Ga0068865_100063054 3300006881 Bacteria 2604
52 Ga0097620_100009945 3300006931 Bacteria 9596
53 Ga0105240_10019743 3300009093 Bacteria 9001
54 Ga0105240_10019977 3300009093 Bacteria 8944
55 Ga0105240_10154686 3300009093 Bacteria 2729
56 Ga0105240_10159040 3300009093 Bacteria 2685
57 Ga0105245_10099302 3300009098 Bacteria 2691
58 Ga0105245_10316833 3300009098 Bacteria 1535
59 Ga0105247_10127247 3300009101 Unclassified 1657
60 Ga0105243_10244593 3300009148 Unclassified 1598
61 Ga0105237_10029579 3300009545 Bacteria 5567
62 Ga0105237_10045079 3300009545 Bacteria 4439
63 Ga0105237_10078828 3300009545 Bacteria 3283
64 Ga0105237_10101322 3300009545 Bacteria 2872
65 Ga0105238_10130451 3300009551 Bacteria 2492
66 Ga0099796_10015929 3300010159 Bacteria 2209
67 Ga0105239_10030549 3300010375 Bacteria 5923
68 Ga0105239_10041242 3300010375 Bacteria 5058
69 Ga0105239_10118581 3300010375 Bacteria 2937
70 Ga0105239_10270497 3300010375 Bacteria 1911
71 Ga0157373_10048714 3300013100 Unclassified 3021
72 Ga0157369_10026007 3300013105 Bacteria 6494
73 Ga0157369_10060859 3300013105 Unclassified 4071
74 Ga0157369_10167420 3300013105 Bacteria 2317
75 Ga0157369_10245580 3300013105 Bacteria 1869
76 Ga0157374_10000378 3300013296 Bacteria 40940
77 Ga0157374_10111333 3300013296 Bacteria 2634
78 Ga0157374_10160916 3300013296 Bacteria 2187
79 Ga0157374_10308308 3300013296 Bacteria 1567
80 Ga0157378_10000718 3300013297 Bacteria 30947
81 Ga0157378_10065322 3300013297 Bacteria 3257
82 Ga0157378_10088569 3300013297 Bacteria 2809
83 Ga0163162_10003647 3300013306 Bacteria 14769
84 Ga0163162_10060419 3300013306 Bacteria 3825
85 Ga0157372_10007330 3300013307 Bacteria 11743
86 Ga0157372_10011265 3300013307 Bacteria 9512
87 Ga0157372_10074821 3300013307 Unclassified 3820
88 Ga0157375_10021397 3300013308 Bacteria 5929
89 Ga0157375_10183973 3300013308 Bacteria 2242
90 Ga0157375_10184916 3300013308 Bacteria 2236
91 Ga0157375_10301501 3300013308 Unclassified 1766
92 Ga0157379_10005371 3300014968 Bacteria 11009
93 Ga0157379_10038575 3300014968 Bacteria 4262
94 Ga0157379_10051678 3300014968 Bacteria 3671
95 Ga0213875_10000258 3300021388 Bacteria 53367
96 Ga0207647_10007348 3300025904 Bacteria 7969
97 Ga0207684_10128356 3300025910 Bacteria 2176
98 Ga0207707_10033196 3300025912 Bacteria 4518
99 Ga0207707_10055621 3300025912 Bacteria 3442
100 Ga0207707_10114520 3300025912 Bacteria 2357
101 Ga0207695_10011464 3300025913 Bacteria 10733
102 Ga0207695_10026004 3300025913 Bacteria 6540
103 Ga0207695_10044707 3300025913 Unclassified 4708
104 Ga0207671_10110104 3300025914 Bacteria 2095
105 Ga0207662_10050760 3300025918 Bacteria 2466
106 Ga0207652_10015850 3300025921 Bacteria 6143
107 Ga0207646_10049344 3300025922 Bacteria 3771
108 Ga0207659_10052056 3300025926 Bacteria 2915
109 Ga0207700_10008222 3300025928 Bacteria 6447
110 Ga0207700_10044971 3300025928 Bacteria 3255
111 Ga0207664_10041299 3300025929 Bacteria 3593
112 Ga0207706_10087172 3300025933 Bacteria 2745
113 Ga0207686_10117079 3300025934 Bacteria 1807
114 Ga0207704_10009740 3300025938 Bacteria 4652
115 Ga0207704_10033104 3300025938 Bacteria 2935
116 Ga0207704_10068753 3300025938 Bacteria 2234
117 Ga0207691_10055322 3300025940 Bacteria 3617
118 Ga0207689_10000657 3300025942 Bacteria 32977
119 Ga0207689_10068334 3300025942 Bacteria 2920
120 Ga0207679_10004137 3300025945 Bacteria 9013
121 Ga0207677_10046261 3300026023 Bacteria 2913
122 Ga0207703_10011036 3300026035 Bacteria 7040
123 Ga0207678_10125551 3300026067 Bacteria 2189
124 Ga0207648_10016222 3300026089 Bacteria 6815
125 Ga0207676_10005354 3300026095 Bacteria 9088
126 Ga0207674_10002845 3300026116 Bacteria 21523
127 Ga0207675_100272983 3300026118 Unclassified 1641
128 Ga0207683_10002903 3300026121 Bacteria 14949
129 Ga0268264_10027482 3300028381 Bacteria 4650
130 Ga0268264_10039619 3300028381 Bacteria 3893
131 Ga0265338_10003148 3300028800 Bacteria 23541
132 Ga0265338_10005396 3300028800 Bacteria 16702
133 Ga0265338_10018262 3300028800 Bacteria 7513
134 Ga0265338_10095010 3300028800 Bacteria 2451
135 Ga0265760_10000061 3300031090 Bacteria 30017
136 Ga0265760_10004694 3300031090 Bacteria 3913
137 Ga0265330_10028703 3300031235 Bacteria 2506
138 Ga0265328_10006306 3300031239 Bacteria 5032
139 Ga0265325_10004377 3300031241 Bacteria 8936
140 Ga0265339_10003324 3300031249 Bacteria 11259
141 Ga0265339_10005825 3300031249 Bacteria 8173
142 Ga0265339_10056300 3300031249 Unclassified 2129
143 Ga0265316_10002166 3300031344 Bacteria 20648
144 Ga0265313_10008429 3300031595 Bacteria 6846
145 Ga0265314_10000025 3300031711 Bacteria 292548
146 Ga0265314_10003033 3300031711 Bacteria 16589
147 Ga0265314_10009993 3300031711 Bacteria 7959
148 Ga0265314_10012773 3300031711 Bacteria 6827
149 Ga0265314_10050729 3300031711 Unclassified 2894
150 Ga0265342_10040347 3300031712 Bacteria 2831
151 Ga0373955_0006060 3300035172 Bacteria 5489
152 Ga0373931_0053534 3300035691 Unclassified 2154
153 Ga0373935_0030200 3300035692 Bacteria 3358
154 Ga0373935_0075296 3300035692 Bacteria 2184
155 Ga0373935_0082178 3300035692 Bacteria 2096
156 Ga0373935_0098456 3300035692 Unclassified 1925
157 Ga0373927_0002375 3300035695 Bacteria 13713
158 Ga0373927_0109940 3300035695 Bacteria 1795
159 Ga0373947_0007101 3300035725 Bacteria 6494
160 Ga0373937_0019388 3300036401 Bacteria 6088
161 Ga0373925_0015960 3300037068 Bacteria 5438
162 Ga0373925_0019844 3300037068 Bacteria 4890
163 Ga0373925_0048713 3300037068 Bacteria 3158
164 Ga0373925_0072384 3300037068 Bacteria 2608
165 Ga0436364_0309018 3300037853 Bacteria 153512
166 Ga0436364_0947060 3300037853 Bacteria 1603
167 Ga0466963_0097603 3300044694 Bacteria 2008
168 Ga0466957_0000591 3300044842 Bacteria 18425
169 Ga0495580_0109299 3300046472 Bacteria 1919
170 Ga0495630_0147629 3300046517 Bacteria 1789
171 Ga0495665_0103720 3300046531 Bacteria 1492
172 Ga0495587_0127673 3300046536 Unclassified 1454
173 Ga0495645_0026531 3300046543 Bacteria 4206
174 Ga0495635_0060452 3300046663 Bacteria 2604
175 Ga0495623_0126516 3300046679 Bacteria 1534
176 Ga0495600_0125550 3300046809 Bacteria 1669
177 Ga0495581_0087352 3300047315 Bacteria 1808
178 Ga0495674_0131996 3300047319 Bacteria 2104
179 Ga0495674_0204109 3300047319 Unclassified 1639
180 Ga0495602_0112551 3300048088 Bacteria 2209
181 Ga0496102_0004976 3300048905 Bacteria 11250
182 Ga0496103_0001456 3300048906 Bacteria 15851
183 Ga0496104_0152389 3300048907 Unclassified 2218
184 Ga0496107_0146776 3300048910 Unclassified 1744
185 Ga0496112_0004787 3300048915 Bacteria 11546
186 Ga0496112_0029159 3300048915 Bacteria 5335
187 Ga0501031_0020739 3300049568 Unclassified 4284
188 Ga0501032_0000731 3300049569 Bacteria 26669
189 Ga0501034_0009590 3300049571 Bacteria 10131
190 Ga0501036_0009480 3300049572 Bacteria 8008
191 Ga0501037_0005560 3300049573 Bacteria 9191
192 Ga0501038_0001499 3300049574 Bacteria 21493
193 Ga0501039_0017784 3300049575 Bacteria 5452
194 Ga0501043_0001574 3300049579 Bacteria 19863
195 Ga0501046_0003873 3300049580 Bacteria 13690
196 Ga0501047_0007779 3300049581 Bacteria 10091
197 Ga0501048_0069287 3300049582 Bacteria 2491
198 Ga0501068_0003279 3300049584 Bacteria 8672
199 Ga0501069_0000731 3300049585 Bacteria 15294
200 Ga0501070_0002658 3300049586 Bacteria 15595
201 Ga0501073_0000570 3300049589 Bacteria 26026
202 Ga0501077_0007462 3300049593 Bacteria 6746
203 Ga0501079_0023828 3300049741 Unclassified 4696
204 Ga0501080_0002622 3300049742 Bacteria 15751
205 Ga0501035_0021682 3300049822 Bacteria 5907
206 Ga0501045_0050108 3300049824 Bacteria 3046
207 Ga0501084_0000211 3300054114 Bacteria 45242
208 Ga0501082_0004706 3300060353 Bacteria 11903
209 Ga0070717_10007101
210 Ga0070683_100214254
211 Ga0070683_100328100
212 Ga0068869_100001516
213 Ga0068869_100060915
214 Ga0070666_10060633
215 Ga0068868_100016870
216 Ga0068868_100102915
217 Ga0070687_100035987
218 Ga0070675_100076548
219 Ga0070671_100248577
220 Ga0070667_100091759
221 Ga0070714_100032874
222 Ga0070713_100060417
223 Ga0070708_100038763
224 Ga0070681_10016419
225 Ga0070681_10049586
226 Ga0070681_10074929
227 Ga0068867_100003041
228 Ga0070706_100098839
229 Ga0070707_100044428
230 Ga0070707_100167893
231 Ga0070684_100010795
232 Ga0070684_100045718
233 Ga0070684_100067104
234 Ga0070697_100004504
235 Ga0068853_100116361
236 Ga0070695_100052098
237 Ga0070664_100010532
238 Ga0068857_100050769
239 Ga0068856_100004181
240 Ga0068852_100155617
241 Ga0068859_100009945
242 Ga0068864_100132620
243 Ga0068866_10016074
244 Ga0068861_100126645
245 Ga0068863_100081602
246 Ga0068858_100007793
247 Ga0068858_100019256
248 Ga0068860_100116485
249 Ga0068862_100043138
250 Ga0070717_10002046
251 Ga0070716_100024258
252 Ga0097621_100082566
253 Ga0097621_100132039
254 Ga0097621_100251387
255 Ga0068871_100013059
256 Ga0068871_100081593
257 Ga0068865_100004828
258 Ga0068865_100005199
259 Ga0068865_100063054
260 Ga0097620_100009945
261 Ga0105240_10019743
262 Ga0105240_10019977
263 Ga0105240_10154686
264 Ga0105240_10159040
265 Ga0105245_10099302
266 Ga0105245_10316833
267 Ga0105247_10127247
268 Ga0105243_10244593
269 Ga0105237_10029579
270 Ga0105237_10045079
271 Ga0105237_10078828
272 Ga0105237_10101322
273 Ga0105238_10130451
274 Ga0099796_10015929
275 Ga0105239_10030549
276 Ga0105239_10041242
277 Ga0105239_10118581
278 Ga0105239_10270497
279 Ga0157373_10048714
280 Ga0157369_10026007
281 Ga0157369_10060859
282 Ga0157369_10167420
283 Ga0157369_10245580
284 Ga0157374_10000378
285 Ga0157374_10111333
286 Ga0157374_10160916
287 Ga0157374_10308308
288 Ga0157378_10000718
289 Ga0157378_10065322
290 Ga0157378_10088569
291 Ga0163162_10003647
292 Ga0163162_10060419
293 Ga0157372_10007330
294 Ga0157372_10011265
295 Ga0157372_10074821
296 Ga0157375_10021397
297 Ga0157375_10183973
298 Ga0157375_10184916
299 Ga0157375_10301501
300 Ga0157379_10005371
301 Ga0157379_10038575
302 Ga0157379_10051678
303 Ga0213875_10000258
304 Ga0207647_10007348
305 Ga0207684_10128356
306 Ga0207707_10033196
307 Ga0207707_10055621
308 Ga0207707_10114520
309 Ga0207695_10011464
310 Ga0207695_10026004
311 Ga0207695_10044707
312 Ga0207671_10110104
313 Ga0207662_10050760
314 Ga0207652_10015850
315 Ga0207646_10049344
316 Ga0207659_10052056
317 Ga0207700_10008222
318 Ga0207700_10044971
319 Ga0207664_10041299
320 Ga0207706_10087172
321 Ga0207686_10117079
322 Ga0207704_10009740
323 Ga0207704_10033104
324 Ga0207704_10068753
325 Ga0207691_10055322
326 Ga0207689_10000657
327 Ga0207689_10068334
328 Ga0207679_10004137
329 Ga0207677_10046261
330 Ga0207703_10011036
331 Ga0207678_10125551
332 Ga0207648_10016222
333 Ga0207676_10005354
334 Ga0207674_10002845
335 Ga0207675_100272983
336 Ga0207683_10002903
337 Ga0268264_10027482
338 Ga0268264_10039619
339 Ga0265338_10003148
340 Ga0265338_10005396
341 Ga0265338_10018262
342 Ga0265338_10095010
343 Ga0265760_10000061
344 Ga0265760_10004694
345 Ga0265330_10028703
346 Ga0265328_10006306
347 Ga0265325_10004377
348 Ga0265339_10003324
349 Ga0265339_10005825
350 Ga0265339_10056300
351 Ga0265316_10002166
352 Ga0265313_10008429
353 Ga0265314_10000025
354 Ga0265314_10003033
355 Ga0265314_10009993
356 Ga0265314_10012773
357 Ga0265314_10050729
358 Ga0265342_10040347
359 Ga0373955_0006060
360 Ga0373931_0053534
361 Ga0373935_0030200
362 Ga0373935_0075296
363 Ga0373935_0082178
364 Ga0373935_0098456
365 Ga0373927_0002375
366 Ga0373927_0109940
367 Ga0373947_0007101
368 Ga0373937_0019388
369 Ga0373925_0015960
370 Ga0373925_0019844
371 Ga0373925_0048713
372 Ga0373925_0072384
373 Ga0436364_0309018
374 Ga0436364_0947060
375 Ga0466963_0097603
376 Ga0466957_0000591
377 Ga0495580_0109299
378 Ga0495630_0147629
379 Ga0495665_0103720
380 Ga0495587_0127673
381 Ga0495645_0026531
382 Ga0495635_0060452
383 Ga0495623_0126516
384 Ga0495600_0125550
385 Ga0495581_0087352
386 Ga0495674_0131996
387 Ga0495674_0204109
388 Ga0495602_0112551
389 Ga0496102_0004976
390 Ga0496103_0001456
391 Ga0496104_0152389
392 Ga0496107_0146776
393 Ga0496112_0004787
394 Ga0496112_0029159
395 Ga0501031_0020739
396 Ga0501032_0000731
397 Ga0501034_0009590
398 Ga0501036_0009480
399 Ga0501037_0005560
400 Ga0501038_0001499
401 Ga0501039_0017784
402 Ga0501043_0001574
403 Ga0501046_0003873
404 Ga0501047_0007779
405 Ga0501048_0069287
406 Ga0501068_0003279
407 Ga0501069_0000731
408 Ga0501070_0002658
409 Ga0501073_0000570
410 Ga0501077_0007462
411 Ga0501079_0023828
412 Ga0501080_0002622
413 Ga0501035_0021682
414 Ga0501045_0050108
415 Ga0501084_0000211
416 Ga0501082_0004706

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rhw-assembly1.cif.gz_C crystal structure of human cd11b i-domain (cd11b-i) in complex with staphylococcus aureus octameric bi-component leukocidin lukgh 0.8455 77 208
7n1o-assembly1.cif.gz_A the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone 0.8274 72 275
8fzu-assembly2.cif.gz_B the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, thr-val linker variant, expressed with sumo tag 0.8227 75 273
4bj3-assembly1.cif.gz_B integrin alpha2 i domain e318w-collagen complex 0.8226 77 217
8fz4-assembly2.cif.gz_B the von willebrand factor a domain of anthrax toxin receptor 2 0.8177 73 271
ID Description Score Start End Superfamily
af_I1L4W2_158_333_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8478 78 180 3.40.50.410
af_F1LNH3_40_248_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8301 71 208 3.40.50.410
af_P12111_442_614_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8262 75 209 3.40.50.410
af_A0A0P0XV48_261_417_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8206 78 189 3.40.50.410
af_Q23561_34_192_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8136 72 208 3.40.50.410
ID Description Score Start End GO Terms
AF-A0A2V9UBG7-F1-model_v4 VWA domain-containing protein 0.9493 72 146
AF-A0A1F2T7L6-F1-model_v4 VWFA domain-containing protein 0.9109 26 313
AF-A0A2V9JEM1-F1-model_v4 VWA domain-containing protein 0.9084 46 314
AF-A0A3M2BVL9-F1-model_v4 VWA domain-containing protein 0.9035 27 314
AF-X0XVX4-F1-model_v4 VWFA domain-containing protein 0.9014 75 206 GO:0016020

Map