F317466

General Info

Members Datasets Scaffolds Average Seq Length
208 142 416 240

Family's Representative Sequence

Representative Sequence 3300005440|Ga0070705_100213618|Ga0070705_1002136181
Length 276
Sequence MTSERRTASSSSENATHAGPQAPASSPGGHGEGLPTIDVSERGAEREGRPQTMDRRLFMQFLAFHTSAATPRMGVESLASAFTERRIAAVVYDDVNDPRGLGILTWSENPAHFVTGVRPLLGDSARGLTLRPELSMLGRTYSTGYEQDLPFWLLHRPEQTVLNQAHDWAIWYPLRRSGAFARLEPREQGAILREHATIGRAYGEQDLAHDVRLACHGLDAHDNEFVIGLVGKSLHPLSHIVQTMRKTRQTSEFISQMGPFFVGHVAWRSALVAPGA

Samples

Sample ID Description Type Environment
1 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
78 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
79 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
82 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
101 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
102 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
103 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
118 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
119 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
120 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.48
Nodule 0
Rhizoplane 0.96
Rhizosphere 98.08
Stem 0
Stem Tuber 0
Unclassified 9.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070705_100213618 3300005440 Bacteria 1331
2 rootH2_10005567 3300003320 Bacteria 31719
3 Ga0065712_10018320 3300005290 Bacteria 1875
4 Ga0070677_10026564 3300005333 Bacteria 2172
5 Ga0070682_100001875 3300005337 Bacteria 11736
6 Ga0070682_100013227 3300005337 Bacteria 4745
7 Ga0070689_100022842 3300005340 Bacteria 4676
8 Ga0070689_100471408 3300005340 Bacteria 1071
9 Ga0070668_100246582 3300005347 Bacteria 1481
10 Ga0070669_100053366 3300005353 Bacteria 2959
11 Ga0070669_100100775 3300005353 Bacteria 2178
12 Ga0070669_100798541 3300005353 Unclassified 802
13 Ga0070675_100066174 3300005354 Bacteria 2989
14 Ga0070675_100607537 3300005354 Unclassified 992
15 Ga0070671_100165474 3300005355 Bacteria 1870
16 Ga0070674_100223539 3300005356 Bacteria 1466
17 Ga0070659_100645487 3300005366 Bacteria 912
18 Ga0070701_10056884 3300005438 Bacteria 2048
19 Ga0070705_100026370 3300005440 Bacteria 3162
20 Ga0070694_100643197 3300005444 Unclassified 858
21 Ga0070663_100010235 3300005455 Bacteria 5842
22 Ga0070678_100023083 3300005456 Bacteria 4139
23 Ga0070685_10027403 3300005466 Bacteria 3148
24 Ga0070706_100167144 3300005467 Bacteria 2054
25 Ga0070707_100063196 3300005468 Bacteria 3553
26 Ga0070698_100036835 3300005471 Bacteria 5049
27 Ga0070698_100256580 3300005471 Bacteria 1681
28 Ga0070684_100051244 3300005535 Bacteria 3585
29 Ga0070695_100007131 3300005545 Bacteria 6624
30 Ga0070696_100225349 3300005546 Bacteria 1408
31 Ga0070665_100105714 3300005548 Bacteria 2817
32 Ga0070665_100201420 3300005548 Bacteria 1991
33 Ga0070704_100550391 3300005549 Unclassified 1008
34 Ga0068856_100073007 3300005614 Bacteria 3397
35 Ga0068866_10112717 3300005718 Bacteria 1520
36 Ga0068861_100076976 3300005719 Unclassified 2601
37 Ga0068863_100097696 3300005841 Bacteria 2789
38 Ga0068860_100381236 3300005843 Bacteria 1392
39 Ga0068860_101167567 3300005843 Unclassified 790
40 Ga0068862_100199451 3300005844 Bacteria 1804
41 Ga0081455_10036765 3300005937 Bacteria 4356
42 Ga0081455_10075235 3300005937 Bacteria 2786
43 Ga0097621_100080451 3300006237 Bacteria 2710
44 Ga0068871_100133385 3300006358 Bacteria 2107
45 Ga0068871_100183287 3300006358 Bacteria 1800
46 Ga0075428_100027635 3300006844 Bacteria 6276
47 Ga0075428_100028050 3300006844 Bacteria 6227
48 Ga0075428_100035730 3300006844 Bacteria 5477
49 Ga0075430_100040055 3300006846 Bacteria 3966
50 Ga0075431_100030143 3300006847 Bacteria 5586
51 Ga0075433_10165610 3300006852 Unclassified 1968
52 Ga0075433_10389311 3300006852 Bacteria 1230
53 Ga0068865_100544246 3300006881 Bacteria 974
54 Ga0075435_100075759 3300007076 Bacteria 2756
55 Ga0075435_100520768 3300007076 Bacteria 1029
56 Ga0111539_10015786 3300009094 Bacteria 9382
57 Ga0111539_10170895 3300009094 Bacteria 2539
58 Ga0111539_10304158 3300009094 Bacteria 1856
59 Ga0111539_10346247 3300009094 Unclassified 1730
60 Ga0111539_11034946 3300009094 Unclassified 954
61 Ga0114129_10129441 3300009147 Bacteria 3469
62 Ga0105243_10052914 3300009148 Bacteria 3218
63 Ga0105243_10614008 3300009148 Bacteria 1049
64 Ga0105242_10420608 3300009176 Bacteria 1252
65 Ga0105249_10083404 3300009553 Bacteria 2975
66 Ga0157378_10039974 3300013297 Bacteria 4160
67 Ga0163162_10313006 3300013306 Bacteria 1703
68 Ga0163163_10122850 3300014325 Bacteria 2631
69 Ga0157380_10199666 3300014326 Bacteria 1773
70 Ga0157380_10258173 3300014326 Bacteria 1581
71 Ga0157380_10653161 3300014326 Unclassified 1049
72 Ga0207682_10015862 3300025893 Bacteria 2936
73 Ga0207699_10007465 3300025906 Bacteria 5350
74 Ga0207695_10361501 3300025913 Bacteria 1338
75 Ga0207671_10024529 3300025914 Bacteria 4531
76 Ga0207646_10125073 3300025922 Bacteria 2311
77 Ga0207646_10240835 3300025922 Bacteria 1634
78 Ga0207681_10236732 3300025923 Bacteria 1419
79 Ga0207681_10544451 3300025923 Unclassified 955
80 Ga0207659_10098147 3300025926 Bacteria 2202
81 Ga0207700_10003346 3300025928 Bacteria 9298
82 Ga0207670_10004132 3300025936 Bacteria 7774
83 Ga0207669_10052361 3300025937 Bacteria 2452
84 Ga0207691_10227332 3300025940 Bacteria 1616
85 Ga0207711_10052329 3300025941 Bacteria 3499
86 Ga0207661_10400247 3300025944 Bacteria 1245
87 Ga0207651_10110646 3300025960 Bacteria 2061
88 Ga0207678_10022515 3300026067 Bacteria 5518
89 Ga0207708_10706522 3300026075 Unclassified 862
90 Ga0207702_10067521 3300026078 Bacteria 3069
91 Ga0207641_10175937 3300026088 Bacteria 1957
92 Ga0207641_10425624 3300026088 Unclassified 1279
93 Ga0207675_100007703 3300026118 Bacteria 10164
94 Ga0207683_10012462 3300026121 Bacteria 7255
95 Ga0207428_10015524 3300027907 Bacteria 6585
96 Ga0268266_10079117 3300028379 Bacteria 2862
97 Ga0265326_10008928 3300028558 Bacteria 3004
98 Ga0265326_10061799 3300028558 Bacteria 1059
99 Ga0265334_10076265 3300028573 Bacteria 1242
100 Ga0265324_10050977 3300029957 Bacteria 1422
101 Ga0265332_10003126 3300031238 Bacteria 8066
102 Ga0265332_10040693 3300031238 Bacteria 2011
103 Ga0265328_10031320 3300031239 Bacteria 1977
104 Ga0265320_10000773 3300031240 Bacteria 24495
105 Ga0265340_10003072 3300031247 Bacteria 9476
106 Ga0265339_10001072 3300031249 Bacteria 20789
107 Ga0265339_10045849 3300031249 Bacteria 2405
108 Ga0265331_10046981 3300031250 Bacteria 2079
109 Ga0265316_10000883 3300031344 Bacteria 32849
110 Ga0265316_10122678 3300031344 Bacteria 1962
111 Ga0265313_10149337 3300031595 Bacteria 1000
112 Ga0265314_10000001 3300031711 Bacteria 3792860
113 Ga0265314_10024749 3300031711 Bacteria 4544
114 Ga0265314_10033650 3300031711 Bacteria 3754
115 Ga0265314_10337731 3300031711 Unclassified 833
116 Ga0316576_10080722 3300031727 Bacteria 2413
117 Ga0316576_10146116 3300031727 Bacteria 1781
118 Ga0307406_10097908 3300031901 Bacteria 1990
119 Ga0307407_10008268 3300031903 Bacteria 4766
120 Ga0307411_10552945 3300032005 Bacteria 982
121 Ga0307415_100474561 3300032126 Bacteria 1087
122 Ga0373955_0124974 3300035172 Bacteria 1498
123 Ga0316574_0059513 3300035398 Bacteria 2396
124 Ga0316574_0214226 3300035398 Bacteria 1235
125 Ga0373935_0577097 3300035692 Bacteria 821
126 Ga0373935_0679713 3300035692 Bacteria 756
127 Ga0373933_0008649 3300035724 Bacteria 5551
128 Ga0373937_0065648 3300036401 Unclassified 3341
129 Ga0316582_0229913 3300036647 Bacteria 1269
130 Ga0316584_0472191 3300036712 Bacteria 885
131 Ga0453683_0006893 3300044673 Bacteria 7747
132 Ga0451576_0048023 3300045051 Bacteria 4486
133 Ga0451576_0179592 3300045051 Bacteria 2210
134 Ga0451576_0267935 3300045051 Bacteria 1785
135 Ga0495629_0146330 3300046459 Bacteria 1643
136 Ga0495594_0322076 3300046499 Bacteria 881
137 Ga0495586_0040489 3300046535 Bacteria 2507
138 Ga0495621_0248923 3300046539 Bacteria 725
139 Ga0495659_0160282 3300046664 Bacteria 908
140 Ga0495589_0028925 3300046794 Bacteria 2795
141 Ga0496108_0537608 3300048911 Bacteria 1020
142 Ga0496112_0971148 3300048915 Bacteria 770
143 Ga0501032_0151994 3300049569 Bacteria 1522
144 Ga0501037_0322568 3300049573 Unclassified 1069
145 Ga0501038_0001890 3300049574 Bacteria 19374
146 Ga0501038_0020009 3300049574 Bacteria 6024
147 Ga0501040_0005238 3300049576 Bacteria 8379
148 Ga0501041_0008406 3300049577 Bacteria 6070
149 Ga0501043_0021849 3300049579 Bacteria 5018
150 Ga0501046_0065334 3300049580 Bacteria 2839
151 Ga0501047_0005371 3300049581 Bacteria 12041
152 Ga0501048_0064976 3300049582 Bacteria 2580
153 Ga0501067_0004971 3300049583 Bacteria 7387
154 Ga0501068_0000101 3300049584 Bacteria 37243
155 Ga0501068_0115556 3300049584 Bacteria 1671
156 Ga0501068_0264122 3300049584 Bacteria 1098
157 Ga0501069_0198678 3300049585 Bacteria 1161
158 Ga0501070_0104142 3300049586 Bacteria 2346
159 Ga0501071_0108833 3300049587 Bacteria 2047
160 Ga0501071_0123081 3300049587 Bacteria 1923
161 Ga0501072_0000032 3300049588 Bacteria 127251
162 Ga0501072_0002531 3300049588 Bacteria 13692
163 Ga0501073_0035015 3300049589 Bacteria 3570
164 Ga0501073_0201430 3300049589 Bacteria 1376
165 Ga0501074_0002998 3300049590 Bacteria 11874
166 Ga0501075_0000010 3300049591 Bacteria 87481
167 Ga0501076_0000027 3300049592 Bacteria 78077
168 Ga0501076_0185470 3300049592 Bacteria 1697
169 Ga0501076_0410116 3300049592 Bacteria 1114
170 Ga0501076_0537724 3300049592 Bacteria 963
171 Ga0501077_0000526 3300049593 Bacteria 23173
172 Ga0501077_0010636 3300049593 Bacteria 5731
173 Ga0501077_0126250 3300049593 Bacteria 1622
174 Ga0501079_0002469 3300049741 Bacteria 13425
175 Ga0501079_0216999 3300049741 Bacteria 1494
176 Ga0501080_0001569 3300049742 Bacteria 19338
177 Ga0501080_0031355 3300049742 Bacteria 4953
178 Ga0501080_0068164 3300049742 Bacteria 3310
179 Ga0501080_0190377 3300049742 Unclassified 1885
180 Ga0501081_0009893 3300049743 Bacteria 6212
181 Ga0501081_0472399 3300049743 Bacteria 933
182 Ga0501083_0011596 3300049744 Bacteria 6182
183 Ga0501083_0020378 3300049744 Bacteria 4613
184 Ga0501083_0050262 3300049744 Bacteria 2806
185 Ga0501083_0085894 3300049744 Bacteria 2081
186 Ga0501083_0200348 3300049744 Unclassified 1302
187 Ga0501044_0044456 3300049823 Bacteria 4608
188 Ga0501045_0728681 3300049824 Unclassified 731
189 nmdc:mga05p37_333103_c1 3300050507 Bacteria 1792
190 nmdc:mga05p37_719952_c1 3300050507 Bacteria 1105
191 nmdc:mga0qj67_23543_c1 3300050509 Bacteria 4738
192 nmdc:mga06r32_4123_c1 3300050510 Bacteria 13009
193 nmdc:mga08y16_19452_c1 3300050511 Bacteria 7159
194 nmdc:mga08y16_345697_c1 3300050511 Bacteria 1529
195 nmdc:mga0n895_586167_c1 3300050512 Bacteria 1118
196 nmdc:mga0rr50_171161_c1 3300050513 Bacteria 1770
197 nmdc:mga0rr50_49023_c1 3300050513 Bacteria 3125
198 nmdc:mga0a205_483812_c1 3300050515 Bacteria 1096
199 nmdc:mga0a205_535514_c1 3300050515 Unclassified 1027
200 Ga0500555_016451 3300053103 Bacteria 2131
201 Ga0501084_0005045 3300054114 Bacteria 10801
202 Ga0501084_0006524 3300054114 Bacteria 9586
203 Ga0501084_0009755 3300054114 Bacteria 7940
204 Ga0501084_0021734 3300054114 Bacteria 5350
205 Ga0501082_0000115 3300060353 Bacteria 63029
206 Ga0501082_0000780 3300060353 Bacteria 27961
207 Ga0530510_0000010 3300061734 Bacteria 155647
208 Ga0530510_0016130 3300061734 Bacteria 5283
209 Ga0070705_100213618
210 rootH2_10005567
211 Ga0065712_10018320
212 Ga0070677_10026564
213 Ga0070682_100001875
214 Ga0070682_100013227
215 Ga0070689_100022842
216 Ga0070689_100471408
217 Ga0070668_100246582
218 Ga0070669_100053366
219 Ga0070669_100100775
220 Ga0070669_100798541
221 Ga0070675_100066174
222 Ga0070675_100607537
223 Ga0070671_100165474
224 Ga0070674_100223539
225 Ga0070659_100645487
226 Ga0070701_10056884
227 Ga0070705_100026370
228 Ga0070694_100643197
229 Ga0070663_100010235
230 Ga0070678_100023083
231 Ga0070685_10027403
232 Ga0070706_100167144
233 Ga0070707_100063196
234 Ga0070698_100036835
235 Ga0070698_100256580
236 Ga0070684_100051244
237 Ga0070695_100007131
238 Ga0070696_100225349
239 Ga0070665_100105714
240 Ga0070665_100201420
241 Ga0070704_100550391
242 Ga0068856_100073007
243 Ga0068866_10112717
244 Ga0068861_100076976
245 Ga0068863_100097696
246 Ga0068860_100381236
247 Ga0068860_101167567
248 Ga0068862_100199451
249 Ga0081455_10036765
250 Ga0081455_10075235
251 Ga0097621_100080451
252 Ga0068871_100133385
253 Ga0068871_100183287
254 Ga0075428_100027635
255 Ga0075428_100028050
256 Ga0075428_100035730
257 Ga0075430_100040055
258 Ga0075431_100030143
259 Ga0075433_10165610
260 Ga0075433_10389311
261 Ga0068865_100544246
262 Ga0075435_100075759
263 Ga0075435_100520768
264 Ga0111539_10015786
265 Ga0111539_10170895
266 Ga0111539_10304158
267 Ga0111539_10346247
268 Ga0111539_11034946
269 Ga0114129_10129441
270 Ga0105243_10052914
271 Ga0105243_10614008
272 Ga0105242_10420608
273 Ga0105249_10083404
274 Ga0157378_10039974
275 Ga0163162_10313006
276 Ga0163163_10122850
277 Ga0157380_10199666
278 Ga0157380_10258173
279 Ga0157380_10653161
280 Ga0207682_10015862
281 Ga0207699_10007465
282 Ga0207695_10361501
283 Ga0207671_10024529
284 Ga0207646_10125073
285 Ga0207646_10240835
286 Ga0207681_10236732
287 Ga0207681_10544451
288 Ga0207659_10098147
289 Ga0207700_10003346
290 Ga0207670_10004132
291 Ga0207669_10052361
292 Ga0207691_10227332
293 Ga0207711_10052329
294 Ga0207661_10400247
295 Ga0207651_10110646
296 Ga0207678_10022515
297 Ga0207708_10706522
298 Ga0207702_10067521
299 Ga0207641_10175937
300 Ga0207641_10425624
301 Ga0207675_100007703
302 Ga0207683_10012462
303 Ga0207428_10015524
304 Ga0268266_10079117
305 Ga0265326_10008928
306 Ga0265326_10061799
307 Ga0265334_10076265
308 Ga0265324_10050977
309 Ga0265332_10003126
310 Ga0265332_10040693
311 Ga0265328_10031320
312 Ga0265320_10000773
313 Ga0265340_10003072
314 Ga0265339_10001072
315 Ga0265339_10045849
316 Ga0265331_10046981
317 Ga0265316_10000883
318 Ga0265316_10122678
319 Ga0265313_10149337
320 Ga0265314_10000001
321 Ga0265314_10024749
322 Ga0265314_10033650
323 Ga0265314_10337731
324 Ga0316576_10080722
325 Ga0316576_10146116
326 Ga0307406_10097908
327 Ga0307407_10008268
328 Ga0307411_10552945
329 Ga0307415_100474561
330 Ga0373955_0124974
331 Ga0316574_0059513
332 Ga0316574_0214226
333 Ga0373935_0577097
334 Ga0373935_0679713
335 Ga0373933_0008649
336 Ga0373937_0065648
337 Ga0316582_0229913
338 Ga0316584_0472191
339 Ga0453683_0006893
340 Ga0451576_0048023
341 Ga0451576_0179592
342 Ga0451576_0267935
343 Ga0495629_0146330
344 Ga0495594_0322076
345 Ga0495586_0040489
346 Ga0495621_0248923
347 Ga0495659_0160282
348 Ga0495589_0028925
349 Ga0496108_0537608
350 Ga0496112_0971148
351 Ga0501032_0151994
352 Ga0501037_0322568
353 Ga0501038_0001890
354 Ga0501038_0020009
355 Ga0501040_0005238
356 Ga0501041_0008406
357 Ga0501043_0021849
358 Ga0501046_0065334
359 Ga0501047_0005371
360 Ga0501048_0064976
361 Ga0501067_0004971
362 Ga0501068_0000101
363 Ga0501068_0115556
364 Ga0501068_0264122
365 Ga0501069_0198678
366 Ga0501070_0104142
367 Ga0501071_0108833
368 Ga0501071_0123081
369 Ga0501072_0000032
370 Ga0501072_0002531
371 Ga0501073_0035015
372 Ga0501073_0201430
373 Ga0501074_0002998
374 Ga0501075_0000010
375 Ga0501076_0000027
376 Ga0501076_0185470
377 Ga0501076_0410116
378 Ga0501076_0537724
379 Ga0501077_0000526
380 Ga0501077_0010636
381 Ga0501077_0126250
382 Ga0501079_0002469
383 Ga0501079_0216999
384 Ga0501080_0001569
385 Ga0501080_0031355
386 Ga0501080_0068164
387 Ga0501080_0190377
388 Ga0501081_0009893
389 Ga0501081_0472399
390 Ga0501083_0011596
391 Ga0501083_0020378
392 Ga0501083_0050262
393 Ga0501083_0085894
394 Ga0501083_0200348
395 Ga0501044_0044456
396 Ga0501045_0728681
397 nmdc:mga05p37_333103_c1
398 nmdc:mga05p37_719952_c1
399 nmdc:mga0qj67_23543_c1
400 nmdc:mga06r32_4123_c1
401 nmdc:mga08y16_19452_c1
402 nmdc:mga08y16_345697_c1
403 nmdc:mga0n895_586167_c1
404 nmdc:mga0rr50_171161_c1
405 nmdc:mga0rr50_49023_c1
406 nmdc:mga0a205_483812_c1
407 nmdc:mga0a205_535514_c1
408 Ga0500555_016451
409 Ga0501084_0005045
410 Ga0501084_0006524
411 Ga0501084_0009755
412 Ga0501084_0021734
413 Ga0501082_0000115
414 Ga0501082_0000780
415 Ga0530510_0000010
416 Ga0530510_0016130

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06778

Chlor_dismutase

Chlorite dismutase

101

266

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5loq-assembly1.cif.gz_B structure of coproheme bound hemq from listeria monocytogenes 0.7579 27 229
5loq-assembly1.cif.gz_E structure of coproheme bound hemq from listeria monocytogenes 0.7508 27 229
7q4f-assembly1.cif.gz_E structure of coproheme decarboxylase from corynebacterium dipththeriae w183y mutant in complex with coproheme 0.7492 29 230
4m09-assembly1.cif.gz_E crystal structure of mutant chlorite dismutase from candidatus nitrospira defluvii w146y r173q 0.745 30 229
6fxj-assembly1.cif.gz_E structure of coproheme decarboxylase from listeria monocytogenes in complex with iron coproporphyrin iii 0.7449 27 229
ID Description Score Start End Superfamily
af_P9WL45_128_230_3.30.70.1030 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Apc35880; domain 1 0.7811 143 225 3.30.70.1030
5loqB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Apc35880; domain 1 0.7709 142 229 3.30.70.1030
af_Q68EH8_184_264_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.7236 31 107 3.30.70.260
5loqE01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Apc35880; domain 1 0.7186 27 126 3.30.70.1030
1vdhA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Apc35880; domain 1 0.7021 132 229 3.30.70.1030
ID Description Score Start End GO Terms
AF-A0A356TLN0-F1-model_v4 Chlorite dismutase 0.9564 5 159
AF-A0A7J6UEI4-F1-model_v4 Uncharacterized protein 0.932 67 231 GO:0016491
GO:0020037
GO:0046872
AF-A0A382TEB0-F1-model_v4 Chlorite dismutase 0.9277 81 231 GO:0016491
GO:0020037
GO:0046872
AF-A0A2W4M621-F1-model_v4 Chlorite dismutase 0.9261 1 231 GO:0016491
GO:0020037
GO:0046872
AF-A0A661NBQ6-F1-model_v4 Chlorite dismutase family protein 0.9244 1 231 GO:0016491
GO:0020037
GO:0046872

Map