F316896

General Info

Members Datasets Scaffolds Average Seq Length
207 157 414 245

Family's Representative Sequence

Representative Sequence 3300046516|Ga0495628_0065882|Ga0495628_0065882_1259_2044
Length 261
Sequence MRGDTGFPVRVRFTKYGKVRFISHRDVARAFERAFRIEQLPLAFTEGFSPRPKVSFGLALSVGHESNAEYLDVELTEPVDLVGLPAALCAALPEGIDVTGVGRLRDRAPALQEAVTTVQFRVEVTDDPIAPSVDPGFAAVVATTVTRALAGDSLEVTRTRKGRESTDDIRPAIRSITLEDGPLRPGHTPSGAPVLELTLATQPRGARPREVLDALAATGGIDLHDRRVLRTHQWIERGGARCEPLEADAFVPALDLEARAS

Samples

Sample ID Description Type Environment
1 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
2 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
71 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
85 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
86 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
87 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
88 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
89 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
90 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
91 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
95 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
96 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
103 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
104 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
105 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
153 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
155 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
156 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.52
Metatranscriptomes 0.48
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.38
Nodule 0
Rhizoplane 10.14
Rhizosphere 84.06
Stem 0
Stem Tuber 0
Unclassified 13.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495628_0065882 3300046516 Bacteria 2832
2 Ga0070687_100315623 3300005343 Bacteria 997
3 Ga0070668_100271791 3300005347 Bacteria 1413
4 Ga0070671_100757436 3300005355 Unclassified 844
5 Ga0070713_100575845 3300005436 Bacteria 1068
6 Ga0070710_10339768 3300005437 Bacteria 991
7 Ga0070705_100007462 3300005440 Bacteria 5381
8 Ga0070694_100549210 3300005444 Unclassified 925
9 Ga0070708_100013011 3300005445 Bacteria 6800
10 Ga0070708_100149369 3300005445 Bacteria 2172
11 Ga0070708_100243144 3300005445 Bacteria 1690
12 Ga0070685_10211975 3300005466 Unclassified 1265
13 Ga0070706_100077133 3300005467 Bacteria 3084
14 Ga0070698_100071017 3300005471 Bacteria 3492
15 Ga0070699_100015639 3300005518 Bacteria 6518
16 Ga0070684_100646271 3300005535 Unclassified 985
17 Ga0070697_100058249 3300005536 Bacteria 3144
18 Ga0070686_100177019 3300005544 Bacteria 1513
19 Ga0070686_100202466 3300005544 Bacteria 1424
20 Ga0070695_100130814 3300005545 Bacteria 1730
21 Ga0070693_100143400 3300005547 Bacteria 1506
22 Ga0070693_100472949 3300005547 Unclassified 884
23 Ga0070665_100244103 3300005548 Bacteria 1796
24 Ga0068864_100451044 3300005618 Bacteria 1230
25 Ga0068860_100528047 3300005843 Bacteria 1180
26 Ga0081455_10067718 3300005937 Bacteria 2974
27 Ga0081455_10192436 3300005937 Bacteria 1535
28 Ga0081539_10011132 3300005985 Bacteria 7177
29 Ga0075363_100068422 3300006048 Bacteria 1926
30 Ga0075364_10166974 3300006051 Bacteria 1487
31 Ga0070712_100211358 3300006175 Bacteria 1530
32 Ga0075367_10195256 3300006178 Bacteria 1264
33 Ga0075428_100000156 3300006844 Bacteria 62057
34 Ga0075428_100129760 3300006844 Bacteria 2742
35 Ga0075430_100035022 3300006846 Bacteria 4262
36 Ga0075431_100131653 3300006847 Bacteria 2579
37 Ga0075431_100268613 3300006847 Bacteria 1729
38 Ga0075431_100326690 3300006847 Bacteria 1546
39 Ga0075433_10000802 3300006852 Bacteria 21821
40 Ga0075434_100001775 3300006871 Bacteria 18588
41 Ga0075429_100007017 3300006880 Bacteria 9788
42 Ga0075436_100029469 3300006914 Bacteria 3774
43 Ga0075435_100000666 3300007076 Bacteria 21202
44 Ga0075435_100319168 3300007076 Bacteria 1330
45 Ga0111539_10927778 3300009094 Unclassified 1012
46 Ga0105245_10066319 3300009098 Bacteria 3266
47 Ga0105245_10629782 3300009098 Bacteria 1101
48 Ga0105245_10730630 3300009098 Bacteria 1025
49 Ga0105247_10370884 3300009101 Bacteria 1012
50 Ga0114129_10077020 3300009147 Bacteria 4641
51 Ga0105243_10541790 3300009148 Unclassified 1110
52 Ga0105242_10226095 3300009176 Bacteria 1675
53 Ga0105249_10402062 3300009553 Bacteria 1400
54 Ga0157375_11167939 3300013308 Bacteria 902
55 Ga0163163_10300882 3300014325 Bacteria 1656
56 Ga0163163_11129247 3300014325 Unclassified 846
57 Ga0157379_10059286 3300014968 Bacteria 3422
58 Ga0157379_10296206 3300014968 Bacteria 1474
59 Ga0197907_11238577 3300020069 Unclassified 1082
60 Ga0213875_10075494 3300021388 Bacteria 1573
61 Ga0207692_10034081 3300025898 Bacteria 2462
62 Ga0207699_10142639 3300025906 Bacteria 1576
63 Ga0207693_10172935 3300025915 Bacteria 1700
64 Ga0207693_10200714 3300025915 Bacteria 1568
65 Ga0207663_10163597 3300025916 Bacteria 1574
66 Ga0207662_10332387 3300025918 Unclassified 1017
67 Ga0207652_10711913 3300025921 Unclassified 895
68 Ga0207646_10090868 3300025922 Bacteria 2733
69 Ga0207694_10566982 3300025924 Bacteria 954
70 Ga0207650_10628842 3300025925 Unclassified 904
71 Ga0207687_10165339 3300025927 Bacteria 1702
72 Ga0207700_10463603 3300025928 Bacteria 1118
73 Ga0207686_10189967 3300025934 Bacteria 1463
74 Ga0207669_10240490 3300025937 Bacteria 1342
75 Ga0207689_10164381 3300025942 Bacteria 1829
76 Ga0207661_10283703 3300025944 Bacteria 1481
77 Ga0207712_10040040 3300025961 Bacteria 3213
78 Ga0207668_10577692 3300025972 Unclassified 977
79 Ga0207677_10262813 3300026023 Bacteria 1408
80 Ga0207676_10525623 3300026095 Unclassified 1127
81 Ga0209974_10057765 3300027876 Bacteria 1311
82 Ga0265322_10088534 3300028654 Bacteria 879
83 Ga0265338_10000292 3300028800 Bacteria 90040
84 Ga0265325_10004346 3300031241 Bacteria 8973
85 Ga0265339_10003469 3300031249 Bacteria 11024
86 Ga0265327_10006684 3300031251 Bacteria 9141
87 Ga0265327_10092597 3300031251 Bacteria 1471
88 Ga0265313_10086192 3300031595 Unclassified 1417
89 Ga0307409_100165764 3300031995 Bacteria 1939
90 Ga0307415_100219591 3300032126 Bacteria 1523
91 Ga0373945_0127284 3300035116 Bacteria 1018
92 Ga0373943_0009332 3300035170 Bacteria 4399
93 Ga0373943_0070573 3300035170 Bacteria 1768
94 Ga0373943_0334248 3300035170 Bacteria 866
95 Ga0373931_0278151 3300035691 Bacteria 1027
96 Ga0373935_0154516 3300035692 Bacteria 1559
97 Ga0373933_0004015 3300035724 Bacteria 8110
98 Ga0373937_0469241 3300036401 Bacteria 1195
99 Ga0373925_0201098 3300037068 Bacteria 1584
100 Ga0436364_0776731 3300037853 Bacteria 2592
101 Ga0436363_0927665 3300039450 Bacteria 896
102 Ga0436363_1432185 3300039450 Bacteria 1327
103 Ga0439465_0016644 3300041413 Bacteria 2294
104 Ga0451853_0783257 3300041512 Bacteria 1519
105 Ga0466969_0180854 3300044656 Unclassified 965
106 Ga0495641_0049703 3300046461 Bacteria 1919
107 Ga0495639_0326616 3300046475 Bacteria 768
108 Ga0495664_0123488 3300046477 Bacteria 1566
109 Ga0495596_0079657 3300046500 Bacteria 1272
110 Ga0495608_0023077 3300046511 Bacteria 4266
111 Ga0495618_0200226 3300046514 Bacteria 1264
112 Ga0495628_0011213 3300046516 Bacteria 7584
113 Ga0495628_0072509 3300046516 Bacteria 2683
114 Ga0495630_0081710 3300046517 Bacteria 2438
115 Ga0495630_0102954 3300046517 Bacteria 2160
116 Ga0495630_0145635 3300046517 Bacteria 1801
117 Ga0495644_0113925 3300046523 Bacteria 1027
118 Ga0495665_0191574 3300046531 Bacteria 1061
119 Ga0495640_0031181 3300046533 Bacteria 3807
120 Ga0495640_0152737 3300046533 Bacteria 1483
121 Ga0495586_0097359 3300046535 Unclassified 1630
122 Ga0495645_0082743 3300046543 Bacteria 2302
123 Ga0495622_0186430 3300046557 Bacteria 929
124 Ga0495634_0304474 3300046642 Bacteria 963
125 Ga0495611_0195540 3300046648 Bacteria 944
126 Ga0495588_0164884 3300046674 Bacteria 1172
127 Ga0495646_0159911 3300046680 Bacteria 1248
128 Ga0495658_0177852 3300046683 Bacteria 1319
129 Ga0495658_0314720 3300046683 Bacteria 991
130 Ga0495613_0048994 3300046689 Bacteria 3119
131 Ga0495613_0134637 3300046689 Bacteria 1768
132 Ga0495624_0042152 3300046690 Bacteria 2917
133 Ga0495624_0427709 3300046690 Bacteria 794
134 Ga0495674_0074070 3300047319 Bacteria 2934
135 Ga0495680_0057518 3300047322 Bacteria 3007
136 Ga0495680_0139039 3300047322 Bacteria 1778
137 Ga0495675_0205209 3300047444 Unclassified 1198
138 Ga0495684_0338979 3300047471 Bacteria 1070
139 Ga0495602_0225160 3300048088 Bacteria 1413
140 Ga0496100_0151742 3300048903 Bacteria 1653
141 Ga0496101_0114621 3300048904 Bacteria 2032
142 Ga0496102_0014884 3300048905 Bacteria 6767
143 Ga0496104_0106798 3300048907 Bacteria 2683
144 Ga0496105_0020311 3300048908 Bacteria 5366
145 Ga0496105_0075100 3300048908 Bacteria 2792
146 Ga0496105_0158384 3300048908 Bacteria 1859
147 Ga0496108_0353784 3300048911 Bacteria 1282
148 Ga0496109_0754576 3300048912 Bacteria 911
149 Ga0496110_0347236 3300048913 Unclassified 1352
150 Ga0496110_0390827 3300048913 Unclassified 1268
151 Ga0496111_0346359 3300048914 Unclassified 1100
152 Ga0496112_0114225 3300048915 Bacteria 2671
153 Ga0496112_0360252 3300048915 Bacteria 1396
154 Ga0496113_0265799 3300048916 Unclassified 1371
155 Ga0496114_0217268 3300048917 Bacteria 1678
156 Ga0496114_0331769 3300048917 Bacteria 1345
157 Ga0496114_0336213 3300048917 Bacteria 1335
158 Ga0496115_0005937 3300048918 Bacteria 8912
159 Ga0496115_0161414 3300048918 Bacteria 1852
160 Ga0496115_0458474 3300048918 Bacteria 1029
161 Ga0501031_0187444 3300049568 Bacteria 1351
162 Ga0501034_0004418 3300049571 Bacteria 15643
163 Ga0501034_0054826 3300049571 Bacteria 4012
164 Ga0501036_0040596 3300049572 Bacteria 3936
165 Ga0501038_0249715 3300049574 Bacteria 1406
166 Ga0501039_0203670 3300049575 Bacteria 1556
167 Ga0501042_0111072 3300049578 Bacteria 1974
168 Ga0501043_0047784 3300049579 Bacteria 3365
169 Ga0501046_0118784 3300049580 Bacteria 2013
170 Ga0501048_0521535 3300049582 Unclassified 852
171 Ga0501070_0021755 3300049586 Bacteria 5374
172 Ga0501071_0282112 3300049587 Bacteria 1257
173 Ga0501072_0180049 3300049588 Bacteria 1686
174 Ga0501072_0672818 3300049588 Archaea 814
175 Ga0501073_0304325 3300049589 Bacteria 1100
176 Ga0501075_0166329 3300049591 Bacteria 1683
177 Ga0501079_0144360 3300049741 Bacteria 1855
178 Ga0501079_0479670 3300049741 Bacteria 977
179 Ga0501080_0330569 3300049742 Unclassified 1378
180 Ga0501081_0383726 3300049743 Unclassified 1039
181 Ga0501081_0456337 3300049743 Bacteria 950
182 Ga0501044_0042139 3300049823 Bacteria 4751
183 Ga0501045_0587466 3300049824 Bacteria 825
184 nmdc:mga03n38_47275_c1 3300050490 Bacteria 1904
185 nmdc:mga05p37_310964_c1 3300050507 Bacteria 1868
186 nmdc:mga05p37_619898_c1 3300050507 Bacteria 1217
187 nmdc:mga0qj67_115181_c1 3300050509 Bacteria 2172
188 nmdc:mga0n895_29168_c1 3300050512 Bacteria 5259
189 nmdc:mga0rr50_12047_c1 3300050513 Bacteria 5569
190 nmdc:mga0a205_2261_c1 3300050515 Bacteria 16980
191 Ga0495601_0011628 3300053077 Bacteria 5273
192 Ga0495601_0090334 3300053077 Bacteria 1970
193 Ga0495601_0160347 3300053077 Bacteria 1470
194 Ga0495601_0203836 3300053077 Bacteria 1292
195 Ga0495601_0372646 3300053077 Unclassified 927
196 Ga0495612_0243296 3300053078 Bacteria 799
197 Ga0495595_0049283 3300053084 Bacteria 1947
198 Ga0495619_0013789 3300053085 Bacteria 5099
199 Ga0495619_0113625 3300053085 Bacteria 1852
200 Ga0495619_0250087 3300053085 Bacteria 1228
201 Ga0495619_0506171 3300053085 Unclassified 830
202 Ga0500568_0109611 3300053139 Bacteria 1032
203 Ga0500616_0000110 3300053153 Bacteria 152339
204 Ga0500616_0012264 3300053153 Bacteria 5017
205 Ga0501084_0000073 3300054114 Bacteria 75652
206 Ga0501084_0187763 3300054114 Bacteria 1744
207 Ga0501084_0270479 3300054114 Bacteria 1435
208 Ga0495628_0065882
209 Ga0070687_100315623
210 Ga0070668_100271791
211 Ga0070671_100757436
212 Ga0070713_100575845
213 Ga0070710_10339768
214 Ga0070705_100007462
215 Ga0070694_100549210
216 Ga0070708_100013011
217 Ga0070708_100149369
218 Ga0070708_100243144
219 Ga0070685_10211975
220 Ga0070706_100077133
221 Ga0070698_100071017
222 Ga0070699_100015639
223 Ga0070684_100646271
224 Ga0070697_100058249
225 Ga0070686_100177019
226 Ga0070686_100202466
227 Ga0070695_100130814
228 Ga0070693_100143400
229 Ga0070693_100472949
230 Ga0070665_100244103
231 Ga0068864_100451044
232 Ga0068860_100528047
233 Ga0081455_10067718
234 Ga0081455_10192436
235 Ga0081539_10011132
236 Ga0075363_100068422
237 Ga0075364_10166974
238 Ga0070712_100211358
239 Ga0075367_10195256
240 Ga0075428_100000156
241 Ga0075428_100129760
242 Ga0075430_100035022
243 Ga0075431_100131653
244 Ga0075431_100268613
245 Ga0075431_100326690
246 Ga0075433_10000802
247 Ga0075434_100001775
248 Ga0075429_100007017
249 Ga0075436_100029469
250 Ga0075435_100000666
251 Ga0075435_100319168
252 Ga0111539_10927778
253 Ga0105245_10066319
254 Ga0105245_10629782
255 Ga0105245_10730630
256 Ga0105247_10370884
257 Ga0114129_10077020
258 Ga0105243_10541790
259 Ga0105242_10226095
260 Ga0105249_10402062
261 Ga0157375_11167939
262 Ga0163163_10300882
263 Ga0163163_11129247
264 Ga0157379_10059286
265 Ga0157379_10296206
266 Ga0197907_11238577
267 Ga0213875_10075494
268 Ga0207692_10034081
269 Ga0207699_10142639
270 Ga0207693_10172935
271 Ga0207693_10200714
272 Ga0207663_10163597
273 Ga0207662_10332387
274 Ga0207652_10711913
275 Ga0207646_10090868
276 Ga0207694_10566982
277 Ga0207650_10628842
278 Ga0207687_10165339
279 Ga0207700_10463603
280 Ga0207686_10189967
281 Ga0207669_10240490
282 Ga0207689_10164381
283 Ga0207661_10283703
284 Ga0207712_10040040
285 Ga0207668_10577692
286 Ga0207677_10262813
287 Ga0207676_10525623
288 Ga0209974_10057765
289 Ga0265322_10088534
290 Ga0265338_10000292
291 Ga0265325_10004346
292 Ga0265339_10003469
293 Ga0265327_10006684
294 Ga0265327_10092597
295 Ga0265313_10086192
296 Ga0307409_100165764
297 Ga0307415_100219591
298 Ga0373945_0127284
299 Ga0373943_0009332
300 Ga0373943_0070573
301 Ga0373943_0334248
302 Ga0373931_0278151
303 Ga0373935_0154516
304 Ga0373933_0004015
305 Ga0373937_0469241
306 Ga0373925_0201098
307 Ga0436364_0776731
308 Ga0436363_0927665
309 Ga0436363_1432185
310 Ga0439465_0016644
311 Ga0451853_0783257
312 Ga0466969_0180854
313 Ga0495641_0049703
314 Ga0495639_0326616
315 Ga0495664_0123488
316 Ga0495596_0079657
317 Ga0495608_0023077
318 Ga0495618_0200226
319 Ga0495628_0011213
320 Ga0495628_0072509
321 Ga0495630_0081710
322 Ga0495630_0102954
323 Ga0495630_0145635
324 Ga0495644_0113925
325 Ga0495665_0191574
326 Ga0495640_0031181
327 Ga0495640_0152737
328 Ga0495586_0097359
329 Ga0495645_0082743
330 Ga0495622_0186430
331 Ga0495634_0304474
332 Ga0495611_0195540
333 Ga0495588_0164884
334 Ga0495646_0159911
335 Ga0495658_0177852
336 Ga0495658_0314720
337 Ga0495613_0048994
338 Ga0495613_0134637
339 Ga0495624_0042152
340 Ga0495624_0427709
341 Ga0495674_0074070
342 Ga0495680_0057518
343 Ga0495680_0139039
344 Ga0495675_0205209
345 Ga0495684_0338979
346 Ga0495602_0225160
347 Ga0496100_0151742
348 Ga0496101_0114621
349 Ga0496102_0014884
350 Ga0496104_0106798
351 Ga0496105_0020311
352 Ga0496105_0075100
353 Ga0496105_0158384
354 Ga0496108_0353784
355 Ga0496109_0754576
356 Ga0496110_0347236
357 Ga0496110_0390827
358 Ga0496111_0346359
359 Ga0496112_0114225
360 Ga0496112_0360252
361 Ga0496113_0265799
362 Ga0496114_0217268
363 Ga0496114_0331769
364 Ga0496114_0336213
365 Ga0496115_0005937
366 Ga0496115_0161414
367 Ga0496115_0458474
368 Ga0501031_0187444
369 Ga0501034_0004418
370 Ga0501034_0054826
371 Ga0501036_0040596
372 Ga0501038_0249715
373 Ga0501039_0203670
374 Ga0501042_0111072
375 Ga0501043_0047784
376 Ga0501046_0118784
377 Ga0501048_0521535
378 Ga0501070_0021755
379 Ga0501071_0282112
380 Ga0501072_0180049
381 Ga0501072_0672818
382 Ga0501073_0304325
383 Ga0501075_0166329
384 Ga0501079_0144360
385 Ga0501079_0479670
386 Ga0501080_0330569
387 Ga0501081_0383726
388 Ga0501081_0456337
389 Ga0501044_0042139
390 Ga0501045_0587466
391 nmdc:mga03n38_47275_c1
392 nmdc:mga05p37_310964_c1
393 nmdc:mga05p37_619898_c1
394 nmdc:mga0qj67_115181_c1
395 nmdc:mga0n895_29168_c1
396 nmdc:mga0rr50_12047_c1
397 nmdc:mga0a205_2261_c1
398 Ga0495601_0011628
399 Ga0495601_0090334
400 Ga0495601_0160347
401 Ga0495601_0203836
402 Ga0495601_0372646
403 Ga0495612_0243296
404 Ga0495595_0049283
405 Ga0495619_0013789
406 Ga0495619_0113625
407 Ga0495619_0250087
408 Ga0495619_0506171
409 Ga0500568_0109611
410 Ga0500616_0000110
411 Ga0500616_0012264
412 Ga0501084_0000073
413 Ga0501084_0187763
414 Ga0501084_0270479

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10105

DUF2344

Uncharacterized protein conserved in bacteria (DUF2344)

8

208

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7r9g-assembly1.cif.gz_A-2 catalytically inactive yeast pseudouridine synthase, pus1, bound to rna 0.7634 6 126
2ey4-assembly1.cif.gz_A crystal structure of a cbf5-nop10-gar1 complex 0.7036 9 222
3uai-assembly1.cif.gz_A structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces cerevisiae 0.6994 9 222
3u28-assembly1.cif.gz_A crystal structure of a cbf5-nop10-gar1 complex from saccharomyces cerevisiae 0.6943 9 219
2aus-assembly1.cif.gz_C crystal structure of the archaeal box h/aca srnp nop10-cbf5 complex 0.6932 9 222
ID Description Score Start End Superfamily
af_A0A0R0F7R0_40_148_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.7815 7 114 3.30.70.580
af_Q2FW37_1_104_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.7763 8 113 3.30.70.580
af_A0A0R0F7R0_40_148_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.7685 7 114 3.30.70.580
af_O74451_30_149_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.7568 4 113 3.30.70.580
af_Q2FW37_1_104_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.7498 8 113 3.30.70.580
ID Description Score Start End GO Terms
AF-A0A1F4TNW2-F1-model_v4 DUF2344 domain-containing protein 0.9859 7 104
AF-A0A7K2P030-F1-model_v4 DUF2344 domain-containing protein 0.979 8 99
AF-A0A7V4WC36-F1-model_v4 DUF2344 domain-containing protein 0.9754 7 104
AF-A0A7V9ZJS5-F1-model_v4 DUF2344 domain-containing protein 0.9667 8 101
AF-A0A1F4TNW2-F1-model_v4 DUF2344 domain-containing protein 0.9664 7 104

Map