F316832

General Info

Members Datasets Scaffolds Average Seq Length
207 116 414 305

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0088685|Ga0466963_0088685_497_1501
Length 334
Sequence LVAEEARLELSGHAGLKPLGSKVKMRIVSLLASATEIVCALGAGEMLVGRSHECDSPAWVRELPACSEPAFDVTVSSREIDEEVRRRLHAGEPLYRIHTELIQELKPDLLLTQSHCEVCAITPGDVERSGACVTGARQVAVSASRLDHILGSIRLIAEALGVQARGEELVAREQARLENVRRACEGRSAPSVVMVEWTDPVFAMGNWGPELVEIANGRLLIGHKGEYSTAMEAKRLREVDPEYLIVAPCGYGLERSLGELPVLERHPWWGELQAVRHSRVAFADGNLFFNRSGMTVSRTAEIIAEILHDVRFPGTKEGQWCWAGTAVREMAGRA

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
57 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
62 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
63 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
64 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
66 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
67 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
68 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
69 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
70 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
71 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
72 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
82 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
90 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
91 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
92 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
93 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
94 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
95 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
98 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
99 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
102 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
105 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
106 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.58
Metatranscriptomes 2.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.97
Rhizosphere 98.55
Stem 0
Stem Tuber 0
Unclassified 20.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0088685 3300044694 Bacteria 2104
2 LJNas_1000008 3300000546 Bacteria 25309
3 Ga0070658_10020826 3300005327 Bacteria 5254
4 Ga0070658_10120134 3300005327 Bacteria 2183
5 Ga0070658_10164420 3300005327 Bacteria 1863
6 Ga0070660_100029568 3300005339 Bacteria 4107
7 Ga0070660_100058050 3300005339 Bacteria 3000
8 Ga0070659_100039587 3300005366 Bacteria 3681
9 Ga0070713_100009912 3300005436 Bacteria 6856
10 Ga0070713_100011122 3300005436 Bacteria 6538
11 Ga0070713_100093148 3300005436 Unclassified 2595
12 Ga0070713_100134883 3300005436 Bacteria 2180
13 Ga0070708_100225634 3300005445 Unclassified 1757
14 Ga0070706_100034148 3300005467 Unclassified 4697
15 Ga0070707_100340485 3300005468 Unclassified 1457
16 Ga0070699_100037709 3300005518 Unclassified 4185
17 Ga0068853_100012134 3300005539 Bacteria 7009
18 Ga0068855_100002745 3300005563 Bacteria 21675
19 Ga0068855_100010975 3300005563 Bacteria 10931
20 Ga0068855_100053091 3300005563 Unclassified 4769
21 Ga0068855_100085679 3300005563 Bacteria 3645
22 Ga0068855_100159270 3300005563 Bacteria 2563
23 Ga0068855_100174491 3300005563 Bacteria 2433
24 Ga0068855_100197402 3300005563 Bacteria 2267
25 Ga0068857_100042103 3300005577 Bacteria 4051
26 Ga0068856_100001532 3300005614 Bacteria 24221
27 Ga0068856_100004650 3300005614 Bacteria 13636
28 Ga0068856_100074784 3300005614 Unclassified 3354
29 Ga0068856_100162431 3300005614 Bacteria 2245
30 Ga0068852_100457831 3300005616 Bacteria 1264
31 Ga0068851_10030310 3300005834 Bacteria 2682
32 Ga0070717_10018060 3300006028 Bacteria 5501
33 Ga0070717_10044726 3300006028 Unclassified 3618
34 Ga0070717_10079531 3300006028 Unclassified 2749
35 Ga0070717_10108386 3300006028 Bacteria 2366
36 Ga0070717_10110527 3300006028 Bacteria 2344
37 Ga0070717_10157130 3300006028 Bacteria 1971
38 Ga0070717_10166226 3300006028 Unclassified 1916
39 Ga0070712_100172828 3300006175 Bacteria 1678
40 Ga0068871_100320148 3300006358 Bacteria 1365
41 Ga0068865_100164714 3300006881 Bacteria 1694
42 Ga0105240_10000829 3300009093 Bacteria 55949
43 Ga0105240_10011435 3300009093 Bacteria 12363
44 Ga0105240_10064646 3300009093 Bacteria 4545
45 Ga0105240_10123266 3300009093 Unclassified 3118
46 Ga0105240_10268243 3300009093 Bacteria 1967
47 Ga0105245_10064961 3300009098 Bacteria 3299
48 Ga0105243_10055493 3300009148 Unclassified 3148
49 Ga0105241_10022943 3300009174 Bacteria 4627
50 Ga0105242_10052319 3300009176 Bacteria 3332
51 Ga0105242_10487826 3300009176 Bacteria 1169
52 Ga0105237_10015689 3300009545 Bacteria 7876
53 Ga0105237_10084006 3300009545 Bacteria 3175
54 Ga0105238_10004503 3300009551 Bacteria 13812
55 Ga0105238_10031156 3300009551 Bacteria 5429
56 Ga0105238_10038995 3300009551 Bacteria 4820
57 Ga0105238_10094153 3300009551 Unclassified 2983
58 Ga0105238_10101051 3300009551 Bacteria 2867
59 Ga0105249_10116012 3300009553 Bacteria 2538
60 Ga0105239_10019634 3300010375 Bacteria 7460
61 Ga0105239_10081187 3300010375 Bacteria 3569
62 Ga0157370_10002259 3300013104 Bacteria 23408
63 Ga0157370_10027218 3300013104 Bacteria 5638
64 Ga0157370_10053732 3300013104 Bacteria 3841
65 Ga0157369_10008120 3300013105 Bacteria 12032
66 Ga0157369_10110864 3300013105 Bacteria 2917
67 Ga0157369_10193264 3300013105 Bacteria 2138
68 Ga0157369_10248424 3300013105 Bacteria 1857
69 Ga0157374_10008664 3300013296 Bacteria 8705
70 Ga0157378_10218144 3300013297 Bacteria 1812
71 Ga0163162_10081571 3300013306 Bacteria 3305
72 Ga0163162_10794883 3300013306 Unclassified 1064
73 Ga0157372_10021347 3300013307 Bacteria 6995
74 Ga0157372_10037103 3300013307 Bacteria 5373
75 Ga0157372_10057058 3300013307 Bacteria 4365
76 Ga0157372_10156955 3300013307 Bacteria 2628
77 Ga0157377_10119768 3300014745 Unclassified 1594
78 Ga0157376_10393444 3300014969 Unclassified 1338
79 Ga0157376_10464307 3300014969 Bacteria 1238
80 Ga0224572_1000937 3300024225 Bacteria 3986
81 Ga0207699_10205962 3300025906 Bacteria 1335
82 Ga0207699_10226583 3300025906 Unclassified 1278
83 Ga0207705_10027702 3300025909 Bacteria 4042
84 Ga0207695_10000341 3300025913 Bacteria 109857
85 Ga0207695_10010214 3300025913 Bacteria 11515
86 Ga0207695_10219325 3300025913 Bacteria 1810
87 Ga0207695_10361852 3300025913 Unclassified 1337
88 Ga0207657_10085324 3300025919 Bacteria 2645
89 Ga0207657_10371207 3300025919 Unclassified 1127
90 Ga0207646_10083172 3300025922 Bacteria 2863
91 Ga0207646_10134037 3300025922 Unclassified 2230
92 Ga0207694_10005847 3300025924 Bacteria 9426
93 Ga0207694_10023547 3300025924 Bacteria 4674
94 Ga0207694_10056767 3300025924 Unclassified 3042
95 Ga0207700_10007449 3300025928 Bacteria 6688
96 Ga0207700_10009283 3300025928 Bacteria 6137
97 Ga0207690_10066858 3300025932 Bacteria 2463
98 Ga0207686_10088861 3300025934 Bacteria 2035
99 Ga0207686_10122049 3300025934 Bacteria 1775
100 Ga0207711_10002684 3300025941 Bacteria 15742
101 Ga0207667_10001697 3300025949 Bacteria 27712
102 Ga0207667_10003978 3300025949 Bacteria 18164
103 Ga0207667_10236399 3300025949 Bacteria 1870
104 Ga0207712_10064720 3300025961 Bacteria 2608
105 Ga0207703_10211286 3300026035 Bacteria 1730
106 Ga0207639_10035344 3300026041 Unclassified 3697
107 Ga0207702_10001513 3300026078 Bacteria 22979
108 Ga0207702_10092554 3300026078 Unclassified 2650
109 Ga0207702_10135032 3300026078 Bacteria 2225
110 Ga0207702_10194536 3300026078 Bacteria 1876
111 Ga0207702_10450788 3300026078 Bacteria 1248
112 Ga0207674_10004395 3300026116 Bacteria 16991
113 Ga0207698_10023736 3300026142 Bacteria 4290
114 Ga0207698_10066132 3300026142 Bacteria 2844
115 Ga0265356_1001044 3300028017 Unclassified 4353
116 Ga0265762_1000419 3300030760 Bacteria 7350
117 Ga0265762_1002958 3300030760 Unclassified 3035
118 Ga0265760_10000009 3300031090 Bacteria 108179
119 Ga0265760_10001199 3300031090 Bacteria 7595
120 Ga0265760_10002652 3300031090 Bacteria 5235
121 Ga0265325_10063301 3300031241 Bacteria 1872
122 Ga0265314_10002954 3300031711 Bacteria 16839
123 Ga0316214_1004869 3300033545 Bacteria 1744
124 Ga0373930_0026283 3300034816 Bacteria 1173
125 Ga0373926_0043653 3300035083 Bacteria 1604
126 Ga0373923_0001177 3300035111 Bacteria 7300
127 Ga0373923_0027536 3300035111 Unclassified 2268
128 Ga0373945_0001297 3300035116 Bacteria 7583
129 Ga0373953_0024153 3300035117 Unclassified 2308
130 Ga0373954_0004449 3300035118 Bacteria 6031
131 Ga0373957_0021286 3300035120 Unclassified 2301
132 Ga0373943_0032245 3300035170 Unclassified 2490
133 Ga0373943_0045891 3300035170 Unclassified 2131
134 Ga0373943_0055986 3300035170 Bacteria 1955
135 Ga0373946_0017912 3300035171 Bacteria 2713
136 Ga0373946_0033900 3300035171 Bacteria 2058
137 Ga0373955_0020145 3300035172 Bacteria 3349
138 Ga0373924_0014246 3300035410 Bacteria 3002
139 Ga0373935_0004529 3300035692 Bacteria 8171
140 Ga0373935_0010867 3300035692 Bacteria 5469
141 Ga0373935_0036403 3300035692 Unclassified 3077
142 Ga0373927_0012754 3300035695 Bacteria 5590
143 Ga0373927_0033994 3300035695 Bacteria 3317
144 Ga0373927_0050133 3300035695 Bacteria 2699
145 Ga0373927_0161634 3300035695 Unclassified 1467
146 Ga0373927_0281869 3300035695 Unclassified 1093
147 Ga0373933_0032307 3300035724 Bacteria 3042
148 Ga0373947_0001398 3300035725 Bacteria 14854
149 Ga0373947_0101824 3300035725 Unclassified 1806
150 Ga0373947_0188290 3300035725 Unclassified 1346
151 Ga0373937_0013783 3300036401 Bacteria 7124
152 Ga0373937_0025876 3300036401 Bacteria 5299
153 Ga0373937_0123815 3300036401 Bacteria 2411
154 Ga0373937_0301340 3300036401 Bacteria 1515
155 Ga0373937_0611074 3300036401 Unclassified 1035
156 Ga0373925_0008169 3300037068 Bacteria 7620
157 Ga0373925_0016492 3300037068 Bacteria 5353
158 Ga0373925_0237141 3300037068 Unclassified 1460
159 Ga0395898_0333230 3300037466 Bacteria 1447
160 Ga0436360_0565694 3300039438 Bacteria 16722
161 Ga0439448_0011199 3300042005 Bacteria 2670
162 Ga0453683_0042733 3300044673 Bacteria 2846
163 Ga0466966_0053767 3300044684 Bacteria 2554
164 Ga0466966_0116201 3300044684 Bacteria 1647
165 Ga0466959_0152494 3300045049 Unclassified 1628
166 Ga0466967_0060607 3300045976 Bacteria 3354
167 Ga0495592_0098783 3300046454 Unclassified 2083
168 Ga0495592_0103915 3300046454 Bacteria 2020
169 Ga0495653_0042166 3300046463 Bacteria 3557
170 Ga0495580_0054225 3300046472 Bacteria 2828
171 Ga0495580_0060233 3300046472 Bacteria 2667
172 Ga0495580_0091597 3300046472 Bacteria 2116
173 Ga0495580_0157646 3300046472 Bacteria 1572
174 Ga0495662_0088964 3300046476 Bacteria 1504
175 Ga0495664_0003295 3300046477 Bacteria 8786
176 Ga0495608_0121699 3300046511 Bacteria 1673
177 Ga0495618_0071514 3300046514 Bacteria 2207
178 Ga0495628_0103226 3300046516 Bacteria 2198
179 Ga0495630_0062277 3300046517 Bacteria 2802
180 Ga0495630_0269741 3300046517 Bacteria 1300
181 Ga0495666_0113784 3300046526 Unclassified 1270
182 Ga0495652_0161311 3300046529 Bacteria 1740
183 Ga0495665_0013428 3300046531 Bacteria 4428
184 Ga0495640_0128009 3300046533 Bacteria 1645
185 Ga0495587_0002664 3300046536 Bacteria 11919
186 Ga0495645_0083618 3300046543 Bacteria 2287
187 Ga0495667_0134895 3300046559 Bacteria 1591
188 Ga0495634_0072472 3300046642 Bacteria 2265
189 Ga0495635_0280760 3300046663 Bacteria 1119
190 Ga0495599_0037350 3300046678 Bacteria 3051
191 Ga0495623_0021378 3300046679 Bacteria 4178
192 Ga0495658_0012230 3300046683 Unclassified 4339
193 Ga0495658_0073287 3300046683 Bacteria 1993
194 Ga0495613_0005710 3300046689 Bacteria 9329
195 Ga0495613_0072297 3300046689 Bacteria 2514
196 Ga0495604_0086033 3300047317 Bacteria 2345
197 Ga0495674_0088375 3300047319 Bacteria 2650
198 Ga0495674_0181738 3300047319 Bacteria 1751
199 Ga0495680_0020026 3300047322 Bacteria 5638
200 Ga0495675_0032204 3300047444 Bacteria 3345
201 Ga0495675_0281638 3300047444 Unclassified 991
202 Ga0495684_0162659 3300047471 Bacteria 1664
203 Ga0495602_0014551 3300048088 Bacteria 7984
204 Ga0495602_0125801 3300048088 Bacteria 2054
205 Ga0496112_0296855 3300048915 Bacteria 1562
206 Ga0496115_0087978 3300048918 Bacteria 2535
207 Ga0495612_0025008 3300053078 Unclassified 2398
208 Ga0466963_0088685
209 LJNas_1000008
210 Ga0070658_10020826
211 Ga0070658_10120134
212 Ga0070658_10164420
213 Ga0070660_100029568
214 Ga0070660_100058050
215 Ga0070659_100039587
216 Ga0070713_100009912
217 Ga0070713_100011122
218 Ga0070713_100093148
219 Ga0070713_100134883
220 Ga0070708_100225634
221 Ga0070706_100034148
222 Ga0070707_100340485
223 Ga0070699_100037709
224 Ga0068853_100012134
225 Ga0068855_100002745
226 Ga0068855_100010975
227 Ga0068855_100053091
228 Ga0068855_100085679
229 Ga0068855_100159270
230 Ga0068855_100174491
231 Ga0068855_100197402
232 Ga0068857_100042103
233 Ga0068856_100001532
234 Ga0068856_100004650
235 Ga0068856_100074784
236 Ga0068856_100162431
237 Ga0068852_100457831
238 Ga0068851_10030310
239 Ga0070717_10018060
240 Ga0070717_10044726
241 Ga0070717_10079531
242 Ga0070717_10108386
243 Ga0070717_10110527
244 Ga0070717_10157130
245 Ga0070717_10166226
246 Ga0070712_100172828
247 Ga0068871_100320148
248 Ga0068865_100164714
249 Ga0105240_10000829
250 Ga0105240_10011435
251 Ga0105240_10064646
252 Ga0105240_10123266
253 Ga0105240_10268243
254 Ga0105245_10064961
255 Ga0105243_10055493
256 Ga0105241_10022943
257 Ga0105242_10052319
258 Ga0105242_10487826
259 Ga0105237_10015689
260 Ga0105237_10084006
261 Ga0105238_10004503
262 Ga0105238_10031156
263 Ga0105238_10038995
264 Ga0105238_10094153
265 Ga0105238_10101051
266 Ga0105249_10116012
267 Ga0105239_10019634
268 Ga0105239_10081187
269 Ga0157370_10002259
270 Ga0157370_10027218
271 Ga0157370_10053732
272 Ga0157369_10008120
273 Ga0157369_10110864
274 Ga0157369_10193264
275 Ga0157369_10248424
276 Ga0157374_10008664
277 Ga0157378_10218144
278 Ga0163162_10081571
279 Ga0163162_10794883
280 Ga0157372_10021347
281 Ga0157372_10037103
282 Ga0157372_10057058
283 Ga0157372_10156955
284 Ga0157377_10119768
285 Ga0157376_10393444
286 Ga0157376_10464307
287 Ga0224572_1000937
288 Ga0207699_10205962
289 Ga0207699_10226583
290 Ga0207705_10027702
291 Ga0207695_10000341
292 Ga0207695_10010214
293 Ga0207695_10219325
294 Ga0207695_10361852
295 Ga0207657_10085324
296 Ga0207657_10371207
297 Ga0207646_10083172
298 Ga0207646_10134037
299 Ga0207694_10005847
300 Ga0207694_10023547
301 Ga0207694_10056767
302 Ga0207700_10007449
303 Ga0207700_10009283
304 Ga0207690_10066858
305 Ga0207686_10088861
306 Ga0207686_10122049
307 Ga0207711_10002684
308 Ga0207667_10001697
309 Ga0207667_10003978
310 Ga0207667_10236399
311 Ga0207712_10064720
312 Ga0207703_10211286
313 Ga0207639_10035344
314 Ga0207702_10001513
315 Ga0207702_10092554
316 Ga0207702_10135032
317 Ga0207702_10194536
318 Ga0207702_10450788
319 Ga0207674_10004395
320 Ga0207698_10023736
321 Ga0207698_10066132
322 Ga0265356_1001044
323 Ga0265762_1000419
324 Ga0265762_1002958
325 Ga0265760_10000009
326 Ga0265760_10001199
327 Ga0265760_10002652
328 Ga0265325_10063301
329 Ga0265314_10002954
330 Ga0316214_1004869
331 Ga0373930_0026283
332 Ga0373926_0043653
333 Ga0373923_0001177
334 Ga0373923_0027536
335 Ga0373945_0001297
336 Ga0373953_0024153
337 Ga0373954_0004449
338 Ga0373957_0021286
339 Ga0373943_0032245
340 Ga0373943_0045891
341 Ga0373943_0055986
342 Ga0373946_0017912
343 Ga0373946_0033900
344 Ga0373955_0020145
345 Ga0373924_0014246
346 Ga0373935_0004529
347 Ga0373935_0010867
348 Ga0373935_0036403
349 Ga0373927_0012754
350 Ga0373927_0033994
351 Ga0373927_0050133
352 Ga0373927_0161634
353 Ga0373927_0281869
354 Ga0373933_0032307
355 Ga0373947_0001398
356 Ga0373947_0101824
357 Ga0373947_0188290
358 Ga0373937_0013783
359 Ga0373937_0025876
360 Ga0373937_0123815
361 Ga0373937_0301340
362 Ga0373937_0611074
363 Ga0373925_0008169
364 Ga0373925_0016492
365 Ga0373925_0237141
366 Ga0395898_0333230
367 Ga0436360_0565694
368 Ga0439448_0011199
369 Ga0453683_0042733
370 Ga0466966_0053767
371 Ga0466966_0116201
372 Ga0466959_0152494
373 Ga0466967_0060607
374 Ga0495592_0098783
375 Ga0495592_0103915
376 Ga0495653_0042166
377 Ga0495580_0054225
378 Ga0495580_0060233
379 Ga0495580_0091597
380 Ga0495580_0157646
381 Ga0495662_0088964
382 Ga0495664_0003295
383 Ga0495608_0121699
384 Ga0495618_0071514
385 Ga0495628_0103226
386 Ga0495630_0062277
387 Ga0495630_0269741
388 Ga0495666_0113784
389 Ga0495652_0161311
390 Ga0495665_0013428
391 Ga0495640_0128009
392 Ga0495587_0002664
393 Ga0495645_0083618
394 Ga0495667_0134895
395 Ga0495634_0072472
396 Ga0495635_0280760
397 Ga0495599_0037350
398 Ga0495623_0021378
399 Ga0495658_0012230
400 Ga0495658_0073287
401 Ga0495613_0005710
402 Ga0495613_0072297
403 Ga0495604_0086033
404 Ga0495674_0088375
405 Ga0495674_0181738
406 Ga0495680_0020026
407 Ga0495675_0032204
408 Ga0495675_0281638
409 Ga0495684_0162659
410 Ga0495602_0014551
411 Ga0495602_0125801
412 Ga0496112_0296855
413 Ga0496115_0087978
414 Ga0495612_0025008

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01497

Peripla_BP_2

Periplasmic binding protein

27

287

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5m34-assembly2.cif.gz_B structure of cobinamide-bound btuf mutant w66y, the periplasmic vitamin b12 binding protein in e.coli 0.8649 2 286
5m34-assembly1.cif.gz_A structure of cobinamide-bound btuf mutant w66y, the periplasmic vitamin b12 binding protein in e.coli 0.8563 2 287
5m2q-assembly2.cif.gz_B structure of cobinamide-bound btuf mutant w66f, the periplasmic vitamin b12 binding protein in e.coli 0.8518 2 222
5m34-assembly2.cif.gz_B structure of cobinamide-bound btuf mutant w66y, the periplasmic vitamin b12 binding protein in e.coli 0.8475 2 286
5m3b-assembly1.cif.gz_A structure of cobinamide-bound btuf mutant w66l, the periplasmic vitamin b12 binding protein in e.coli 0.8471 2 287
ID Description Score Start End Superfamily
5yscA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8649 2 148 3.40.50.1980
2r79A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.856 2 148 3.40.50.1980
5m2qB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8518 152 222 3.40.50.1980
2q8pA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8503 121 284 3.40.50.1980
3nu1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8456 2 148 3.40.50.1980
ID Description Score Start End GO Terms
AF-A0A2V5WJ10-F1-model_v4 Fe/B12 periplasmic-binding domain-containing protein 0.977 93 278
AF-A0A2V6A237-F1-model_v4 Fe/B12 periplasmic-binding domain-containing protein 0.9734 178 284
AF-A0A854D4D1-F1-model_v4 deleted 0.9688 1 269
AF-A0A534L2I6-F1-model_v4 Cobalamin-binding protein 0.9672 1 285
AF-A0A2D8QNB7-F1-model_v4 Cobalamin-binding protein 0.9669 2 284

Map