F316192

General Info

Members Datasets Scaffolds Average Seq Length
207 129 414 316

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100034854|Ga0070697_1000348543
Length 351
Sequence MANSLPESVQVTEARYFHLPTQVKHLALALVIAAAGNRLAAAESADKPLQLKQTIRLPGVEGRIDHLDLDAANERLFVCAFGNNTVEVLDLRKSERVHTISGLGAPQGVVYIPELNRLFVANDKGGLCNIYDAESWQLIGKEDFQDDADNMRYDSATKRIYVGFGSGGIGIIDPADGKQVGSIKLAAHPEAFELEKQGHRIFVNIPNARHVAVVDRQNGQVISTWKTNGAFGNFPMALDEANHRLFIGCRIPSKLVVLDTGSGNTVANIGIPGDPDDVFYDGKRHRIYAICGAGEIDVIQQADANSYKTVTKTGTANGARTGLFVPERGALFVAVPHRGSQQAEIRRYQIE

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
97 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
129 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.31
Rhizosphere 94.69
Stem 0
Stem Tuber 0
Unclassified 15.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100034854 3300005536 Unclassified 4059
2 MRS1b_contig_2895888 2162886011 Bacteria 1490
3 Ga0065712_10017639 3300005290 Bacteria 1677
4 Ga0065712_10071997 3300005290 Bacteria 4943
5 Ga0065712_10073859 3300005290 Bacteria 4260
6 Ga0065715_10002905 3300005293 Bacteria 4372
7 Ga0065715_10005891 3300005293 Unclassified 3388
8 Ga0065715_10011103 3300005293 Bacteria 3548
9 Ga0065715_10015845 3300005293 Bacteria 2490
10 Ga0065707_10099378 3300005295 Unclassified 3011
11 Ga0065707_10113787 3300005295 Bacteria 2316
12 Ga0070676_10060636 3300005328 Bacteria 2247
13 Ga0070683_100152907 3300005329 Unclassified 2188
14 Ga0070683_100270469 3300005329 Bacteria 1616
15 Ga0070670_100028932 3300005331 Bacteria 4769
16 Ga0070666_10010594 3300005335 Bacteria 5768
17 Ga0068868_100013673 3300005338 Bacteria 5961
18 Ga0068868_100089815 3300005338 Bacteria 2473
19 Ga0070689_100040902 3300005340 Bacteria 3555
20 Ga0070692_10014677 3300005345 Bacteria 3687
21 Ga0070668_100038441 3300005347 Unclassified 3657
22 Ga0070669_100033156 3300005353 Bacteria 3733
23 Ga0070669_100234233 3300005353 Bacteria 1456
24 Ga0070675_100012246 3300005354 Bacteria 6722
25 Ga0070675_100041687 3300005354 Bacteria 3749
26 Ga0070675_100066375 3300005354 Bacteria 2984
27 Ga0070675_100107036 3300005354 Bacteria 2361
28 Ga0070671_100016492 3300005355 Bacteria 5971
29 Ga0070671_100089425 3300005355 Bacteria 2578
30 Ga0070674_100028703 3300005356 Bacteria 3655
31 Ga0070673_100004543 3300005364 Bacteria 8788
32 Ga0070673_100020859 3300005364 Bacteria 4735
33 Ga0070673_100138398 3300005364 Unclassified 2052
34 Ga0070688_100013058 3300005365 Bacteria 4675
35 Ga0070688_100263045 3300005365 Bacteria 1233
36 Ga0070667_100153366 3300005367 Bacteria 2025
37 Ga0070713_100155457 3300005436 Unclassified 2038
38 Ga0070713_100301948 3300005436 Bacteria 1474
39 Ga0070711_100149746 3300005439 Unclassified 1758
40 Ga0070708_100441151 3300005445 Bacteria 1228
41 Ga0070663_100065248 3300005455 Bacteria 2634
42 Ga0068867_100022740 3300005459 Bacteria 4484
43 Ga0070685_10134913 3300005466 Bacteria 1547
44 Ga0070706_100000338 3300005467 Bacteria 56577
45 Ga0070706_100004668 3300005467 Bacteria 13137
46 Ga0070706_100108347 3300005467 Unclassified 2585
47 Ga0070707_100001045 3300005468 Bacteria 27417
48 Ga0070707_100082129 3300005468 Bacteria 3112
49 Ga0070707_100102961 3300005468 Unclassified 2766
50 Ga0070707_100131026 3300005468 Bacteria 2438
51 Ga0070707_100147495 3300005468 Bacteria 2290
52 Ga0070698_100007559 3300005471 Bacteria 11755
53 Ga0070698_100009702 3300005471 Bacteria 10296
54 Ga0070698_100308651 3300005471 Unclassified 1513
55 Ga0070699_100242830 3300005518 Bacteria 1608
56 Ga0070684_100065128 3300005535 Bacteria 3198
57 Ga0070697_100006407 3300005536 Bacteria 9112
58 Ga0070697_100040744 3300005536 Bacteria 3758
59 Ga0070697_100077924 3300005536 Plasmid 2727
60 Ga0070672_100052518 3300005543 Bacteria 3182
61 Ga0070664_100057681 3300005564 Bacteria 3301
62 Ga0070664_100082050 3300005564 Bacteria 2780
63 Ga0068864_100003728 3300005618 Bacteria 12579
64 Ga0068861_100346276 3300005719 Bacteria 1302
65 Ga0068858_100002147 3300005842 Bacteria 19991
66 Ga0070715_10021357 3300006163 Bacteria 2509
67 Ga0070716_100013369 3300006173 Bacteria 4181
68 Ga0070716_100064504 3300006173 Bacteria 2130
69 Ga0070712_100074160 3300006175 Bacteria 2444
70 Ga0068871_100017050 3300006358 Bacteria 5487
71 Ga0075434_100000050 3300006871 Bacteria 57279
72 Ga0075436_100000097 3300006914 Bacteria 51842
73 Ga0075435_100000005 3300007076 Bacteria 121698
74 Ga0111539_10519642 3300009094 Bacteria 1387
75 Ga0111539_10647753 3300009094 Bacteria 1230
76 Ga0105247_10004501 3300009101 Bacteria 8891
77 Ga0105247_10304064 3300009101 Bacteria 1107
78 Ga0114129_10019944 3300009147 Bacteria 9542
79 Ga0105242_10469132 3300009176 Unclassified 1190
80 Ga0105248_10000396 3300009177 Bacteria 50386
81 Ga0105248_10357977 3300009177 Bacteria 1643
82 Ga0105249_10145779 3300009553 Unclassified 2275
83 Ga0105239_10513489 3300010375 Bacteria 1363
84 Ga0157374_10011374 3300013296 Bacteria 7703
85 Ga0157374_10013497 3300013296 Bacteria 7129
86 Ga0157374_10026960 3300013296 Bacteria 5176
87 Ga0157374_10043223 3300013296 Bacteria 4161
88 Ga0157374_10055735 3300013296 Bacteria 3690
89 Ga0157374_10253246 3300013296 Unclassified 1733
90 Ga0157374_10353271 3300013296 Unclassified 1461
91 Ga0157378_10248421 3300013297 Unclassified 1702
92 Ga0157378_10261486 3300013297 Bacteria 1661
93 Ga0163162_10026809 3300013306 Bacteria 5697
94 Ga0163162_10094241 3300013306 Bacteria 3080
95 Ga0157372_10039979 3300013307 Bacteria 5179
96 Ga0157372_10058831 3300013307 Bacteria 4297
97 Ga0157375_10022806 3300013308 Bacteria 5766
98 Ga0157375_10124820 3300013308 Bacteria 2688
99 Ga0157375_10149530 3300013308 Bacteria 2469
100 Ga0163163_10001670 3300014325 Bacteria 18720
101 Ga0182008_10063078 3300014497 Bacteria 1826
102 Ga0157379_10005027 3300014968 Bacteria 11341
103 Ga0157376_10246690 3300014969 Bacteria 1666
104 Ga0163161_10046328 3300017792 Bacteria 3137
105 Ga0207666_1004036 3300025271 Bacteria 1827
106 Ga0207697_10000209 3300025315 Bacteria 31321
107 Ga0207697_10001190 3300025315 Bacteria 14295
108 Ga0207697_10004092 3300025315 Bacteria 7052
109 Ga0207697_10012666 3300025315 Bacteria 3532
110 Ga0207710_10021319 3300025900 Bacteria 2776
111 Ga0207688_10023676 3300025901 Bacteria 3365
112 Ga0207685_10013770 3300025905 Bacteria 2512
113 Ga0207685_10052153 3300025905 Unclassified 1584
114 Ga0207699_10039764 3300025906 Bacteria 2705
115 Ga0207645_10014782 3300025907 Bacteria 5212
116 Ga0207645_10025531 3300025907 Unclassified 3823
117 Ga0207645_10081985 3300025907 Unclassified 2068
118 Ga0207705_10045444 3300025909 Bacteria 3156
119 Ga0207684_10000417 3300025910 Bacteria 56889
120 Ga0207684_10013021 3300025910 Bacteria 7201
121 Ga0207684_10018579 3300025910 Bacteria 5952
122 Ga0207684_10064919 3300025910 Bacteria 3099
123 Ga0207684_10106663 3300025910 Unclassified 2396
124 Ga0207684_10160634 3300025910 Bacteria 1935
125 Ga0207693_10001390 3300025915 Bacteria 21455
126 Ga0207693_10037605 3300025915 Bacteria 3815
127 Ga0207693_10099069 3300025915 Bacteria 2285
128 Ga0207663_10118862 3300025916 Unclassified 1806
129 Ga0207663_10179112 3300025916 Bacteria 1512
130 Ga0207646_10000653 3300025922 Bacteria 44777
131 Ga0207646_10099590 3300025922 Bacteria 2605
132 Ga0207646_10190768 3300025922 Bacteria 1851
133 Ga0207681_10365411 3300025923 Bacteria 1158
134 Ga0207659_10033389 3300025926 Bacteria 3541
135 Ga0207700_10086020 3300025928 Unclassified 2469
136 Ga0207644_10103998 3300025931 Bacteria 2137
137 Ga0207706_10048387 3300025933 Unclassified 3760
138 Ga0207670_10016398 3300025936 Bacteria 4452
139 Ga0207665_10007784 3300025939 Bacteria 7071
140 Ga0207691_10000995 3300025940 Bacteria 28158
141 Ga0207691_10014847 3300025940 Bacteria 7423
142 Ga0207691_10018781 3300025940 Bacteria 6548
143 Ga0207711_10003348 3300025941 Bacteria 13887
144 Ga0207661_10288748 3300025944 Bacteria 1468
145 Ga0207679_10057459 3300025945 Bacteria 2878
146 Ga0207651_10053745 3300025960 Bacteria 2755
147 Ga0207651_10106465 3300025960 Unclassified 2094
148 Ga0207658_10048072 3300025986 Bacteria 3126
149 Ga0207677_10036397 3300026023 Bacteria 3208
150 Ga0207703_10007243 3300026035 Bacteria 8821
151 Ga0207678_10163417 3300026067 Bacteria 1901
152 Ga0207648_10009232 3300026089 Bacteria 9472
153 Ga0207676_10001508 3300026095 Bacteria 17188
154 Ga0207683_10005253 3300026121 Bacteria 11117
155 Ga0207683_10011832 3300026121 Bacteria 7444
156 Ga0207683_10066921 3300026121 Bacteria 3169
157 Ga0207428_10104166 3300027907 Unclassified 2190
158 Ga0268266_10382058 3300028379 Bacteria 1328
159 Ga0268264_10224250 3300028381 Bacteria 1732
160 Ga0373923_0035215 3300035111 Bacteria 2037
161 Ga0373943_0030287 3300035170 Bacteria 2560
162 Ga0373946_0048993 3300035171 Bacteria 1761
163 Ga0373931_0066854 3300035691 Bacteria 1952
164 Ga0373931_0092061 3300035691 Unclassified 1691
165 Ga0373935_0013213 3300035692 Bacteria 4980
166 Ga0373947_0013445 3300035725 Bacteria 4689
167 Ga0373947_0047799 3300035725 Bacteria 2565
168 Ga0373947_0117061 3300035725 Bacteria 1690
169 Ga0373937_0033275 3300036401 Bacteria 4681
170 Ga0373937_0233599 3300036401 Bacteria 1732
171 Ga0373937_0369670 3300036401 Bacteria 1359
172 Ga0495592_0004893 3300046454 Bacteria 9859
173 Ga0495628_0017106 3300046516 Bacteria 6040
174 Ga0495628_0035665 3300046516 Bacteria 3996
175 Ga0495652_0278544 3300046529 Unclassified 1226
176 Ga0495598_0020840 3300046537 Bacteria 1736
177 Ga0495645_0006799 3300046543 Bacteria 7948
178 Ga0495645_0207135 3300046543 Bacteria 1326
179 Ga0495635_0094417 3300046663 Bacteria 2045
180 Ga0495599_0003198 3300046678 Bacteria 9542
181 Ga0495658_0084621 3300046683 Bacteria 1868
182 Ga0495658_0174833 3300046683 Unclassified 1330
183 Ga0495669_0028830 3300046684 Unclassified 2432
184 Ga0495674_0037456 3300047319 Bacteria 4358
185 Ga0495674_0095201 3300047319 Unclassified 2539
186 Ga0495684_0013089 3300047471 Bacteria 6403
187 Ga0495684_0247671 3300047471 Unclassified 1297
188 Ga0495602_0152426 3300048088 Bacteria 1815
189 Ga0496102_0021911 3300048905 Bacteria 5657
190 Ga0496104_0064217 3300048907 Bacteria 3483
191 Ga0496104_0175449 3300048907 Bacteria 2054
192 Ga0496105_0288795 3300048908 Bacteria 1321
193 Ga0496108_0010871 3300048911 Bacteria 7389
194 Ga0496109_0025618 3300048912 Bacteria 5257
195 Ga0496110_0106258 3300048913 Bacteria 2519
196 Ga0496111_0239759 3300048914 Unclassified 1347
197 Ga0496112_0018413 3300048915 Bacteria 6575
198 Ga0496112_0226949 3300048915 Bacteria 1823
199 Ga0496114_0332904 3300048917 Bacteria 1342
200 nmdc:mga05p37_129842_c1 3300050507 Bacteria 3092
201 nmdc:mga08y16_578255_c1 3300050511 Bacteria 1134
202 nmdc:mga0n895_17_c1 3300050512 Bacteria 97721
203 nmdc:mga0rr50_24_c1 3300050513 Bacteria 115213
204 nmdc:mga0rr50_61990_c1 3300050513 Bacteria 2819
205 nmdc:mga08x19_164_c1 3300050514 Bacteria 48608
206 Ga0495601_0006797 3300053077 Bacteria 6699
207 Ga0495619_0038469 3300053085 Bacteria 3121
208 Ga0070697_100034854
209 MRS1b_contig_2895888
210 Ga0065712_10017639
211 Ga0065712_10071997
212 Ga0065712_10073859
213 Ga0065715_10002905
214 Ga0065715_10005891
215 Ga0065715_10011103
216 Ga0065715_10015845
217 Ga0065707_10099378
218 Ga0065707_10113787
219 Ga0070676_10060636
220 Ga0070683_100152907
221 Ga0070683_100270469
222 Ga0070670_100028932
223 Ga0070666_10010594
224 Ga0068868_100013673
225 Ga0068868_100089815
226 Ga0070689_100040902
227 Ga0070692_10014677
228 Ga0070668_100038441
229 Ga0070669_100033156
230 Ga0070669_100234233
231 Ga0070675_100012246
232 Ga0070675_100041687
233 Ga0070675_100066375
234 Ga0070675_100107036
235 Ga0070671_100016492
236 Ga0070671_100089425
237 Ga0070674_100028703
238 Ga0070673_100004543
239 Ga0070673_100020859
240 Ga0070673_100138398
241 Ga0070688_100013058
242 Ga0070688_100263045
243 Ga0070667_100153366
244 Ga0070713_100155457
245 Ga0070713_100301948
246 Ga0070711_100149746
247 Ga0070708_100441151
248 Ga0070663_100065248
249 Ga0068867_100022740
250 Ga0070685_10134913
251 Ga0070706_100000338
252 Ga0070706_100004668
253 Ga0070706_100108347
254 Ga0070707_100001045
255 Ga0070707_100082129
256 Ga0070707_100102961
257 Ga0070707_100131026
258 Ga0070707_100147495
259 Ga0070698_100007559
260 Ga0070698_100009702
261 Ga0070698_100308651
262 Ga0070699_100242830
263 Ga0070684_100065128
264 Ga0070697_100006407
265 Ga0070697_100040744
266 Ga0070697_100077924
267 Ga0070672_100052518
268 Ga0070664_100057681
269 Ga0070664_100082050
270 Ga0068864_100003728
271 Ga0068861_100346276
272 Ga0068858_100002147
273 Ga0070715_10021357
274 Ga0070716_100013369
275 Ga0070716_100064504
276 Ga0070712_100074160
277 Ga0068871_100017050
278 Ga0075434_100000050
279 Ga0075436_100000097
280 Ga0075435_100000005
281 Ga0111539_10519642
282 Ga0111539_10647753
283 Ga0105247_10004501
284 Ga0105247_10304064
285 Ga0114129_10019944
286 Ga0105242_10469132
287 Ga0105248_10000396
288 Ga0105248_10357977
289 Ga0105249_10145779
290 Ga0105239_10513489
291 Ga0157374_10011374
292 Ga0157374_10013497
293 Ga0157374_10026960
294 Ga0157374_10043223
295 Ga0157374_10055735
296 Ga0157374_10253246
297 Ga0157374_10353271
298 Ga0157378_10248421
299 Ga0157378_10261486
300 Ga0163162_10026809
301 Ga0163162_10094241
302 Ga0157372_10039979
303 Ga0157372_10058831
304 Ga0157375_10022806
305 Ga0157375_10124820
306 Ga0157375_10149530
307 Ga0163163_10001670
308 Ga0182008_10063078
309 Ga0157379_10005027
310 Ga0157376_10246690
311 Ga0163161_10046328
312 Ga0207666_1004036
313 Ga0207697_10000209
314 Ga0207697_10001190
315 Ga0207697_10004092
316 Ga0207697_10012666
317 Ga0207710_10021319
318 Ga0207688_10023676
319 Ga0207685_10013770
320 Ga0207685_10052153
321 Ga0207699_10039764
322 Ga0207645_10014782
323 Ga0207645_10025531
324 Ga0207645_10081985
325 Ga0207705_10045444
326 Ga0207684_10000417
327 Ga0207684_10013021
328 Ga0207684_10018579
329 Ga0207684_10064919
330 Ga0207684_10106663
331 Ga0207684_10160634
332 Ga0207693_10001390
333 Ga0207693_10037605
334 Ga0207693_10099069
335 Ga0207663_10118862
336 Ga0207663_10179112
337 Ga0207646_10000653
338 Ga0207646_10099590
339 Ga0207646_10190768
340 Ga0207681_10365411
341 Ga0207659_10033389
342 Ga0207700_10086020
343 Ga0207644_10103998
344 Ga0207706_10048387
345 Ga0207670_10016398
346 Ga0207665_10007784
347 Ga0207691_10000995
348 Ga0207691_10014847
349 Ga0207691_10018781
350 Ga0207711_10003348
351 Ga0207661_10288748
352 Ga0207679_10057459
353 Ga0207651_10053745
354 Ga0207651_10106465
355 Ga0207658_10048072
356 Ga0207677_10036397
357 Ga0207703_10007243
358 Ga0207678_10163417
359 Ga0207648_10009232
360 Ga0207676_10001508
361 Ga0207683_10005253
362 Ga0207683_10011832
363 Ga0207683_10066921
364 Ga0207428_10104166
365 Ga0268266_10382058
366 Ga0268264_10224250
367 Ga0373923_0035215
368 Ga0373943_0030287
369 Ga0373946_0048993
370 Ga0373931_0066854
371 Ga0373931_0092061
372 Ga0373935_0013213
373 Ga0373947_0013445
374 Ga0373947_0047799
375 Ga0373947_0117061
376 Ga0373937_0033275
377 Ga0373937_0233599
378 Ga0373937_0369670
379 Ga0495592_0004893
380 Ga0495628_0017106
381 Ga0495628_0035665
382 Ga0495652_0278544
383 Ga0495598_0020840
384 Ga0495645_0006799
385 Ga0495645_0207135
386 Ga0495635_0094417
387 Ga0495599_0003198
388 Ga0495658_0084621
389 Ga0495658_0174833
390 Ga0495669_0028830
391 Ga0495674_0037456
392 Ga0495674_0095201
393 Ga0495684_0013089
394 Ga0495684_0247671
395 Ga0495602_0152426
396 Ga0496102_0021911
397 Ga0496104_0064217
398 Ga0496104_0175449
399 Ga0496105_0288795
400 Ga0496108_0010871
401 Ga0496109_0025618
402 Ga0496110_0106258
403 Ga0496111_0239759
404 Ga0496112_0018413
405 Ga0496112_0226949
406 Ga0496114_0332904
407 nmdc:mga05p37_129842_c1
408 nmdc:mga08y16_578255_c1
409 nmdc:mga0n895_17_c1
410 nmdc:mga0rr50_24_c1
411 nmdc:mga0rr50_61990_c1
412 nmdc:mga08x19_164_c1
413 Ga0495601_0006797
414 Ga0495619_0038469

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6r5x-assembly1.cif.gz_A 8-bladed beta-propeller formed by four 2-bladed fragments 0.8639 151 226
6g5m-assembly2.cif.gz_D the structure of thiocyanate dehydrogenase from thioalkalivibrio paradoxus complex with cu(i) ions. 0.8352 64 226
6r5y-assembly3.cif.gz_E 8-bladed beta-propeller formed by two 4-bladed fragments 0.8237 50 224
6r60-assembly2.cif.gz_D asymmetric antiparallel assembly of two 5-bladed beta-propeller fragments 0.823 62 225
6r5z-assembly2.cif.gz_E 9-bladed beta-propeller formed by three 3-bladed fragments 0.8163 109 224
ID Description Score Start End Superfamily
af_Q79FU0_283_386_2.40.10.500 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.8933 57 156 2.40.10.500
af_Q0DGP5_451_595_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.885 56 182 2.40.128.630
af_I1L224_490_685_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8823 74 230 2.130.10.10
af_Q05946_473_771_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.882 61 215 2.130.10.10
af_Q8TED0_158_333_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.88 59 216 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A536ZSY9-F1-model_v4 YncE family protein 0.9606 49 318
AF-A0A2V9M4V2-F1-model_v4 YncE family protein 0.9524 103 318
AF-A0A2H1FEM4-F1-model_v4 40-residue YVTN family beta-propeller repeat protein 0.9467 46 318
AF-A0A2V9YP58-F1-model_v4 YncE family protein 0.9416 46 318
AF-A0A2V9CMG2-F1-model_v4 YncE family protein 0.9331 47 318

Map