F315366

General Info

Members Datasets Scaffolds Average Seq Length
206 165 412 393

Family's Representative Sequence

Representative Sequence 3300035725|Ga0373947_0106854|Ga0373947_0106854_303_1703
Length 466
Sequence MVDPKIHSDCMITGQDDHTLSRTTHMTVNTETIAHSRSRSKDPASILEHFAELPDPRREHGKIHMLDEIVFMSICAVLCGADSWQEIADYSHSKYDWLKTFLTLPGGVPSHDTFRRVYCLLDPLAFQVCFSDWIAALMDRHGLISVPADQPALRPIAIDGKTQRGSARRSVGQSPLHMVSAWAVENHLTLGQVATHEKSNEITAIPELLKLLDLEGAVLTIDAMGCQRDIAAGIVEQKGEFVLAVKDNQPHLYEDIEQAFEKALDQGEPGVDFTEFQTKGTHSGRQETRTCCVITNPKGIRNMGLWTKLTAICMVISECEVNGISRSEIRYFIGSVDTTAEQYLGWVRGHWGIENSLHWVLDVCFREDEQRHWAGNSAQNLSWLRKLALCLLKAVKNSKGKSIHRRRLLAGWKNEFLLSSSLADSKASSSLARTVIERTRRAALSSLSLASSCKPAVGLMPREPVH

Samples

Sample ID Description Type Environment
1 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
57 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
58 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
59 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
88 3300031010 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
92 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
95 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
96 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
98 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
102 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
112 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
113 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
114 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
115 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
116 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
119 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
120 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
121 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
131 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
141 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
146 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
151 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
152 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
153 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
154 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
164 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
165 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.51
Metatranscriptomes 0.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.88
Rhizosphere 89.81
Stem 0
Stem Tuber 0
Unclassified 13.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373947_0106854 3300035725 Bacteria 1764
2 rootH2_10062867 3300003320 Bacteria 2941
3 Ga0070683_100232305 3300005329 Bacteria 1753
4 Ga0070690_100081284 3300005330 Bacteria 2120
5 Ga0070666_10176811 3300005335 Bacteria 1496
6 Ga0070680_100184628 3300005336 Bacteria 1757
7 Ga0070682_100222475 3300005337 Bacteria 1344
8 Ga0068868_100293913 3300005338 Bacteria 1378
9 Ga0070689_100276415 3300005340 Bacteria 1392
10 Ga0070671_100258689 3300005355 Bacteria 1479
11 Ga0070674_100276275 3300005356 Bacteria 1330
12 Ga0070667_100305064 3300005367 Bacteria 1434
13 Ga0070709_10178100 3300005434 Unclassified 1491
14 Ga0070714_100260887 3300005435 Bacteria 1605
15 Ga0070714_100331090 3300005435 Bacteria 1426
16 Ga0070713_100313720 3300005436 Unclassified 1447
17 Ga0070713_100316126 3300005436 Bacteria 1441
18 Ga0070710_10137102 3300005437 Bacteria 1497
19 Ga0070711_100175996 3300005439 Bacteria 1635
20 Ga0070708_100265195 3300005445 Unclassified 1615
21 Ga0070678_100060396 3300005456 Bacteria 2790
22 Ga0070685_10125703 3300005466 Bacteria 1597
23 Ga0070706_100324967 3300005467 Unclassified 1434
24 Ga0070698_100319887 3300005471 Bacteria 1482
25 Ga0070679_100090491 3300005530 Bacteria 3048
26 Ga0070684_100207580 3300005535 Bacteria 1785
27 Ga0070697_100059615 3300005536 Unclassified 3109
28 Ga0070686_100047231 3300005544 Bacteria 2721
29 Ga0070665_100444475 3300005548 Bacteria 1306
30 Ga0068854_100310246 3300005578 Bacteria 1279
31 Ga0068856_100281536 3300005614 Bacteria 1680
32 Ga0068861_100320592 3300005719 Bacteria 1349
33 Ga0068858_100269331 3300005842 Bacteria 1620
34 Ga0068860_100279801 3300005843 Bacteria 1630
35 Ga0068860_100319466 3300005843 Bacteria 1524
36 Ga0070712_100206684 3300006175 Unclassified 1546
37 Ga0097621_100319773 3300006237 Bacteria 1374
38 Ga0075428_100413873 3300006844 Bacteria 1444
39 Ga0075431_100311258 3300006847 Bacteria 1590
40 Ga0075431_100384586 3300006847 Bacteria 1407
41 Ga0068865_100150379 3300006881 Bacteria 1766
42 Ga0105240_10366512 3300009093 Bacteria 1630
43 Ga0111539_10491818 3300009094 Unclassified 1429
44 Ga0105247_10132210 3300009101 Bacteria 1627
45 Ga0114129_10641626 3300009147 Bacteria 1371
46 Ga0105243_10296507 3300009148 Bacteria 1463
47 Ga0105242_10125653 3300009176 Bacteria 2207
48 Ga0105248_10279378 3300009177 Bacteria 1880
49 Ga0105248_10285555 3300009177 Bacteria 1858
50 Ga0105238_10271008 3300009551 Bacteria 1678
51 Ga0105249_10245766 3300009553 Bacteria 1771
52 Ga0105249_10370721 3300009553 Bacteria 1455
53 Ga0157371_10161681 3300013102 Bacteria 1599
54 Ga0157369_10222972 3300013105 Bacteria 1973
55 Ga0157369_10353590 3300013105 Bacteria 1526
56 Ga0157369_10360231 3300013105 Bacteria 1510
57 Ga0157378_10191642 3300013297 Bacteria 1928
58 Ga0157372_10251133 3300013307 Bacteria 2053
59 Ga0163163_10364915 3300014325 Bacteria 1501
60 Ga0157379_10197226 3300014968 Bacteria 1820
61 Ga0213873_10010615 3300021358 Unclassified 1945
62 Ga0213872_10009526 3300021361 Bacteria 4656
63 Ga0213876_10109862 3300021384 Bacteria 1463
64 Ga0213875_10105692 3300021388 Bacteria 1314
65 Ga0213871_10023861 3300021441 Unclassified 1543
66 Ga0224570_101975 3300022730 Unclassified 1418
67 Ga0207692_10109891 3300025898 Unclassified 1528
68 Ga0207642_10186005 3300025899 Bacteria 1136
69 Ga0207710_10064519 3300025900 Bacteria 1668
70 Ga0207688_10134726 3300025901 Bacteria 1450
71 Ga0207680_10100832 3300025903 Bacteria 1855
72 Ga0207693_10180726 3300025915 Bacteria 1660
73 Ga0207663_10189325 3300025916 Bacteria 1476
74 Ga0207660_10137823 3300025917 Bacteria 1863
75 Ga0207652_10320125 3300025921 Bacteria 1400
76 Ga0207694_10222296 3300025924 Bacteria 1541
77 Ga0207700_10274282 3300025928 Unclassified 1448
78 Ga0207664_10364268 3300025929 Bacteria 1281
79 Ga0207686_10170161 3300025934 Bacteria 1536
80 Ga0207670_10255036 3300025936 Bacteria 1357
81 Ga0207665_10145413 3300025939 Unclassified 1694
82 Ga0207711_10346955 3300025941 Bacteria 1374
83 Ga0207711_10372224 3300025941 Bacteria 1325
84 Ga0207661_10317627 3300025944 Bacteria 1399
85 Ga0207712_10256302 3300025961 Bacteria 1416
86 Ga0207712_10293934 3300025961 Bacteria 1331
87 Ga0207677_10357659 3300026023 Bacteria 1225
88 Ga0207703_10345258 3300026035 Bacteria 1369
89 Ga0207678_10239144 3300026067 Bacteria 1555
90 Ga0207702_10265614 3300026078 Bacteria 1617
91 Ga0207648_10241150 3300026089 Bacteria 1609
92 Ga0207674_10291689 3300026116 Bacteria 1580
93 Ga0207675_100189019 3300026118 Bacteria 1975
94 Ga0207675_100466393 3300026118 Bacteria 1253
95 Ga0207698_10330298 3300026142 Bacteria 1432
96 Ga0268266_10332539 3300028379 Bacteria 1424
97 Ga0268264_10312190 3300028381 Bacteria 1484
98 Ga0265326_10040124 3300028558 Bacteria 1329
99 Ga0265771_1000658 3300031010 Bacteria 1385
100 Ga0265339_10138919 3300031249 Bacteria 1237
101 Ga0265316_10216317 3300031344 Bacteria 1415
102 Ga0307508_10197757 3300031616 Unclassified 1611
103 Ga0316579_10105544 3300031691 Bacteria 1350
104 Ga0265342_10071848 3300031712 Bacteria 2015
105 Ga0316577_10144034 3300031733 Bacteria 1342
106 Ga0316577_10158696 3300031733 Bacteria 1276
107 Ga0373934_0053219 3300035086 Bacteria 1605
108 Ga0373934_0075016 3300035086 Unclassified 1355
109 Ga0373923_0062313 3300035111 Bacteria 1586
110 Ga0373953_0040103 3300035117 Bacteria 1858
111 Ga0373954_0118264 3300035118 Bacteria 1285
112 Ga0373957_0068093 3300035120 Bacteria 1388
113 Ga0373943_0110990 3300035170 Bacteria 1446
114 Ga0373955_0131413 3300035172 Bacteria 1461
115 Ga0373924_0072486 3300035410 Bacteria 1454
116 Ga0373927_0164152 3300035695 Bacteria 1455
117 Ga0373933_0037131 3300035724 Bacteria 2856
118 Ga0373933_0187172 3300035724 Unclassified 1322
119 Ga0373937_0357766 3300036401 Bacteria 1383
120 Ga0316582_0176693 3300036647 Unclassified 1451
121 Ga0316582_0196266 3300036647 Bacteria 1376
122 Ga0373925_0136171 3300037068 Bacteria 1919
123 Ga0436364_1105216 3300037853 Bacteria 1925
124 Ga0400483_033433 3300039062 Unclassified 1736
125 Ga0400483_038092 3300039062 Unclassified 1998
126 Ga0400483_040152 3300039062 Unclassified 1604
127 Ga0400483_249919 3300039062 Unclassified 2121
128 Ga0400483_286669 3300039062 Bacteria 3013
129 Ga0436365_0521540 3300039437 Bacteria 1499
130 Ga0436360_0021121 3300039438 Bacteria 3519
131 Ga0436360_0528402 3300039438 Bacteria 6189
132 Ga0436360_1043109 3300039438 Bacteria 3264
133 Ga0436361_0163721 3300039447 Bacteria 2037
134 Ga0436361_0687976 3300039447 Bacteria 3115
135 Ga0436361_0715253 3300039447 Bacteria 1496
136 Ga0436361_0733634 3300039447 Bacteria 1289
137 Ga0436361_1038741 3300039447 Unclassified 1702
138 Ga0436363_0514653 3300039450 Bacteria 1400
139 Ga0436362_0022634 3300039453 Plasmid 4477
140 Ga0436362_0234324 3300039453 Bacteria 1911
141 Ga0436362_0279226 3300039453 Bacteria 1899
142 Ga0436362_0318358 3300039453 Bacteria 1979
143 Ga0436362_0491827 3300039453 Unclassified 1244
144 Ga0436362_0549870 3300039453 Bacteria 1700
145 Ga0436362_0881878 3300039453 Unclassified 1247
146 Ga0451853_0652618 3300041512 Bacteria 1816
147 Ga0439456_020101 3300042013 Bacteria 1408
148 Ga0466966_0146899 3300044684 Bacteria 1439
149 Ga0466963_0166316 3300044694 Bacteria 1536
150 Ga0466963_0168297 3300044694 Bacteria 1527
151 Ga0466971_0075381 3300044719 Bacteria 1534
152 Ga0466970_0096399 3300044765 Bacteria 1608
153 Ga0466970_0130627 3300044765 Bacteria 1379
154 Ga0466957_0137119 3300044842 Bacteria 1573
155 Ga0466957_0152248 3300044842 Bacteria 1496
156 Ga0466958_0138669 3300045836 Bacteria 1530
157 Ga0466967_0085054 3300045976 Bacteria 2863
158 Ga0495592_0166314 3300046454 Bacteria 1513
159 Ga0495651_0121994 3300046462 Bacteria 1913
160 Ga0495653_0151092 3300046463 Bacteria 1622
161 Ga0495664_0069022 3300046477 Bacteria 2109
162 Ga0495618_0086893 3300046514 Bacteria 1999
163 Ga0495628_0096679 3300046516 Bacteria 2281
164 Ga0495628_0247833 3300046516 Unclassified 1331
165 Ga0495630_0142826 3300046517 Bacteria 1820
166 Ga0495648_0026199 3300046524 Bacteria 3929
167 Ga0495652_0127505 3300046529 Bacteria 2019
168 Ga0495640_0122911 3300046533 Bacteria 1685
169 Ga0495587_0125095 3300046536 Bacteria 1471
170 Ga0495645_0038703 3300046543 Bacteria 3478
171 Ga0495667_0091800 3300046559 Bacteria 1966
172 Ga0495634_0153223 3300046642 Bacteria 1456
173 Ga0495657_0101626 3300046675 Bacteria 1831
174 Ga0495599_0107242 3300046678 Unclassified 1740
175 Ga0495623_0093609 3300046679 Bacteria 1839
176 Ga0495646_0030541 3300046680 Bacteria 3364
177 Ga0495646_0109680 3300046680 Bacteria 1572
178 Ga0495613_0147748 3300046689 Bacteria 1677
179 Ga0495624_0160173 3300046690 Bacteria 1375
180 Ga0495600_0021398 3300046809 Bacteria 4141
181 Ga0495600_0165106 3300046809 Bacteria 1430
182 Ga0495604_0089282 3300047317 Bacteria 2291
183 Ga0495674_0170488 3300047319 Bacteria 1816
184 Ga0495680_0228848 3300047322 Bacteria 1324
185 Ga0495687_026104 3300047443 Bacteria 2754
186 Ga0495675_0131345 3300047444 Bacteria 1556
187 Ga0495684_0104161 3300047471 Bacteria 2144
188 Ga0495593_0098622 3300047673 Bacteria 1500
189 Ga0495602_0132918 3300048088 Bacteria 1981
190 Ga0496102_0210227 3300048905 Bacteria 1834
191 Ga0496103_0120685 3300048906 Bacteria 1669
192 Ga0496109_0365529 3300048912 Bacteria 1363
193 Ga0496110_0334168 3300048913 Bacteria 1380
194 Ga0496112_0343334 3300048915 Bacteria 1436
195 Ga0496112_0379169 3300048915 Bacteria 1355
196 Ga0496112_0390289 3300048915 Bacteria 1332
197 Ga0496115_0262212 3300048918 Unclassified 1421
198 Ga0501035_0000308 3300049822 Bacteria 56895
199 nmdc:mga05p37_521622_c1 3300050507 Bacteria 1359
200 nmdc:mga06r32_368513_c1 3300050510 Bacteria 1420
201 nmdc:mga06r32_664532_c1 3300050510 Bacteria 1009
202 nmdc:mga08y16_243011_c1 3300050511 Bacteria 1861
203 Ga0495601_0085324 3300053077 Bacteria 2028
204 Ga0495601_0167017 3300053077 Unclassified 1438
205 Ga0495612_0038252 3300053078 Bacteria 1949
206 Ga0495619_0098108 3300053085 Bacteria 1992
207 Ga0373947_0106854
208 rootH2_10062867
209 Ga0070683_100232305
210 Ga0070690_100081284
211 Ga0070666_10176811
212 Ga0070680_100184628
213 Ga0070682_100222475
214 Ga0068868_100293913
215 Ga0070689_100276415
216 Ga0070671_100258689
217 Ga0070674_100276275
218 Ga0070667_100305064
219 Ga0070709_10178100
220 Ga0070714_100260887
221 Ga0070714_100331090
222 Ga0070713_100313720
223 Ga0070713_100316126
224 Ga0070710_10137102
225 Ga0070711_100175996
226 Ga0070708_100265195
227 Ga0070678_100060396
228 Ga0070685_10125703
229 Ga0070706_100324967
230 Ga0070698_100319887
231 Ga0070679_100090491
232 Ga0070684_100207580
233 Ga0070697_100059615
234 Ga0070686_100047231
235 Ga0070665_100444475
236 Ga0068854_100310246
237 Ga0068856_100281536
238 Ga0068861_100320592
239 Ga0068858_100269331
240 Ga0068860_100279801
241 Ga0068860_100319466
242 Ga0070712_100206684
243 Ga0097621_100319773
244 Ga0075428_100413873
245 Ga0075431_100311258
246 Ga0075431_100384586
247 Ga0068865_100150379
248 Ga0105240_10366512
249 Ga0111539_10491818
250 Ga0105247_10132210
251 Ga0114129_10641626
252 Ga0105243_10296507
253 Ga0105242_10125653
254 Ga0105248_10279378
255 Ga0105248_10285555
256 Ga0105238_10271008
257 Ga0105249_10245766
258 Ga0105249_10370721
259 Ga0157371_10161681
260 Ga0157369_10222972
261 Ga0157369_10353590
262 Ga0157369_10360231
263 Ga0157378_10191642
264 Ga0157372_10251133
265 Ga0163163_10364915
266 Ga0157379_10197226
267 Ga0213873_10010615
268 Ga0213872_10009526
269 Ga0213876_10109862
270 Ga0213875_10105692
271 Ga0213871_10023861
272 Ga0224570_101975
273 Ga0207692_10109891
274 Ga0207642_10186005
275 Ga0207710_10064519
276 Ga0207688_10134726
277 Ga0207680_10100832
278 Ga0207693_10180726
279 Ga0207663_10189325
280 Ga0207660_10137823
281 Ga0207652_10320125
282 Ga0207694_10222296
283 Ga0207700_10274282
284 Ga0207664_10364268
285 Ga0207686_10170161
286 Ga0207670_10255036
287 Ga0207665_10145413
288 Ga0207711_10346955
289 Ga0207711_10372224
290 Ga0207661_10317627
291 Ga0207712_10256302
292 Ga0207712_10293934
293 Ga0207677_10357659
294 Ga0207703_10345258
295 Ga0207678_10239144
296 Ga0207702_10265614
297 Ga0207648_10241150
298 Ga0207674_10291689
299 Ga0207675_100189019
300 Ga0207675_100466393
301 Ga0207698_10330298
302 Ga0268266_10332539
303 Ga0268264_10312190
304 Ga0265326_10040124
305 Ga0265771_1000658
306 Ga0265339_10138919
307 Ga0265316_10216317
308 Ga0307508_10197757
309 Ga0316579_10105544
310 Ga0265342_10071848
311 Ga0316577_10144034
312 Ga0316577_10158696
313 Ga0373934_0053219
314 Ga0373934_0075016
315 Ga0373923_0062313
316 Ga0373953_0040103
317 Ga0373954_0118264
318 Ga0373957_0068093
319 Ga0373943_0110990
320 Ga0373955_0131413
321 Ga0373924_0072486
322 Ga0373927_0164152
323 Ga0373933_0037131
324 Ga0373933_0187172
325 Ga0373937_0357766
326 Ga0316582_0176693
327 Ga0316582_0196266
328 Ga0373925_0136171
329 Ga0436364_1105216
330 Ga0400483_033433
331 Ga0400483_038092
332 Ga0400483_040152
333 Ga0400483_249919
334 Ga0400483_286669
335 Ga0436365_0521540
336 Ga0436360_0021121
337 Ga0436360_0528402
338 Ga0436360_1043109
339 Ga0436361_0163721
340 Ga0436361_0687976
341 Ga0436361_0715253
342 Ga0436361_0733634
343 Ga0436361_1038741
344 Ga0436363_0514653
345 Ga0436362_0022634
346 Ga0436362_0234324
347 Ga0436362_0279226
348 Ga0436362_0318358
349 Ga0436362_0491827
350 Ga0436362_0549870
351 Ga0436362_0881878
352 Ga0451853_0652618
353 Ga0439456_020101
354 Ga0466966_0146899
355 Ga0466963_0166316
356 Ga0466963_0168297
357 Ga0466971_0075381
358 Ga0466970_0096399
359 Ga0466970_0130627
360 Ga0466957_0137119
361 Ga0466957_0152248
362 Ga0466958_0138669
363 Ga0466967_0085054
364 Ga0495592_0166314
365 Ga0495651_0121994
366 Ga0495653_0151092
367 Ga0495664_0069022
368 Ga0495618_0086893
369 Ga0495628_0096679
370 Ga0495628_0247833
371 Ga0495630_0142826
372 Ga0495648_0026199
373 Ga0495652_0127505
374 Ga0495640_0122911
375 Ga0495587_0125095
376 Ga0495645_0038703
377 Ga0495667_0091800
378 Ga0495634_0153223
379 Ga0495657_0101626
380 Ga0495599_0107242
381 Ga0495623_0093609
382 Ga0495646_0030541
383 Ga0495646_0109680
384 Ga0495613_0147748
385 Ga0495624_0160173
386 Ga0495600_0021398
387 Ga0495600_0165106
388 Ga0495604_0089282
389 Ga0495674_0170488
390 Ga0495680_0228848
391 Ga0495687_026104
392 Ga0495675_0131345
393 Ga0495684_0104161
394 Ga0495593_0098622
395 Ga0495602_0132918
396 Ga0496102_0210227
397 Ga0496103_0120685
398 Ga0496109_0365529
399 Ga0496110_0334168
400 Ga0496112_0343334
401 Ga0496112_0379169
402 Ga0496112_0390289
403 Ga0496115_0262212
404 Ga0501035_0000308
405 nmdc:mga05p37_521622_c1
406 nmdc:mga06r32_368513_c1
407 nmdc:mga06r32_664532_c1
408 nmdc:mga08y16_243011_c1
409 Ga0495601_0085324
410 Ga0495601_0167017
411 Ga0495612_0038252
412 Ga0495619_0098108

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13808

DDE_Tnp_1_assoc

DDE_Tnp_1-associated

47

134

0.99

PF01609

DDE_Tnp_1

Transposase DDE domain

150

391

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ghb-assembly1.cif.gz_B crystal structure of a porin-like protein (bacuni_01323) from bacteroides uniformis atcc 8492 at 2.32 a resolution 0.7785 236 295
3m7p-assembly1.cif.gz_A-2 fibronectin fragment 0.7105 237 290
4jgw-assembly1.cif.gz_A the conformation of a docking site for sh3 domains is pre-selected in the guanine nucleotide exchange factor rlf 0.7045 238 265
3dfu-assembly1.cif.gz_B crystal structure of a putative rossmann-like dehydrogenase (cgl2689) from corynebacterium glutamicum at 2.07 a resolution 0.6702 158 198
3bdr-assembly1.cif.gz_A-2 crystal structure of fatty acid-binding protein-like ycf58 from thermosynecoccus elongatus. northeast structural genomics consortium target ter13. 0.6689 238 302
ID Description Score Start End Superfamily
af_P76119_7_94_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9227 13 98 3.30.420.10
af_Q2EEQ8_1_84_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9197 11 82 3.30.420.10
af_P28917_100_343_3.90.350.10 Alpha Beta;Alpha-Beta Complex;Transposase Inhibitor Protein From Tn5; Chain A, domain 1;Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.9042 108 354 3.90.350.10
af_P75741_104_321_3.90.350.10 Alpha Beta;Alpha-Beta Complex;Transposase Inhibitor Protein From Tn5; Chain A, domain 1;Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.898 110 332 3.90.350.10
af_P76119_7_94_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8938 13 98 3.30.420.10
ID Description Score Start End GO Terms
AF-H8GKB9-F1-model_v4 Transposase 0.9655 8 384 GO:0003677
GO:0004803
GO:0006313
AF-A0A6M0K6M7-F1-model_v4 ISAs1 family transposase 0.9616 41 383 GO:0003677
GO:0004803
GO:0006313
AF-T2JX74-F1-model_v4 Transposase 0.9588 43 386 GO:0003677
GO:0004803
GO:0006313
AF-A0A1R4H376-F1-model_v4 Transposase 0.9588 162 384 GO:0003677
GO:0004803
GO:0006313
AF-A0A1H6SXX2-F1-model_v4 Predicted transposase YbfD/YdcC associated with H repeats 0.9578 8 386 GO:0003677
GO:0004803
GO:0006313

Map