F314448

General Info

Members Datasets Scaffolds Average Seq Length
205 150 179 1062

Family's Representative Sequence

Representative Sequence 3300053092|Ga0500583_0000003|Ga0500583_0000003_52661_55981
Length 1106
Sequence LVQSQIPSLLLLAISHHQHFRIQKRKITAMKKGTCKNYLLTLICFLLCTPVLFSQVTTATLSGIIKDPKGAPLGSATVTIEFADAGFKQVLATKSDGRFTVPNLRVGGPYTVTVTFINFQPSVTDNVYLELGQNNSLDIQLHEKAAELEKITVTGRSGIFDNKKTGASTNINSRLIKALPTISRSADDYLRLTPSASFTYNGLSFAGRNGQYNNFSLDGAVFNNPFGLDAPTPGGQTNAQPISLDAIDQIQVNIAPYDVTQAGFTGAGINTVTKSGNNKFSGTVYGFYRNQSLTGSKIEKNKLVLPDLKQLQAGFALGGPVIKNKLFYFVSFETEQRSDEASSYVAQNSGNVGKTNTSRVLESDLQQVSSILKSKFNYETGPYQRYTLDQKNYKWLVKLDLNINASNRLSFTYNGLDAHKDKPAHPSAIGRRGPDFTTLQFRNSGYEIVNQLQSFGAELKSNFGSDYANKLRVVYTTFRDKRNPFSTPFPVINITKNNVRYIIAGHEPFSINNRLNQDAFQVTNNFNMFFKKHTVTAGASFESFKFANSFNLTGYGATLFSEADIKTFIDSVPVSHNYVFGSYPLDVDVAYARNRGIANQWTWYYLTVGQLSAYLQDEWQVEDNFRVTAGLRMDIPFYFNASYRNPVMNADGTASGKFDEGEPTLPNKDNLTLFDENGKSLTNGPGKDVDNTRLPSKKPLLSPRIGFNWDVKGDKTVQVRGGSGLFTGRFPFVWLGNHIGNPYSFFYNVTDRDFKWPQVWRSNIGTDIKIPYGTIFTVDVAYTKDVNGMMVRNYKLGTPSGTLNSGTGDNRKVYLPANQGTANTYAFTNTSVGYQFNITFQAQQYLEGGFYVMAGYNYLLAKDASSISAEISSDAFDRNPILNNSNKAVLSHSLYGNTHRIVAAFSKKFAYDDHLATTFSLFGSWNSGNRFAYVYGGDINNDGTGTNDLLYVPTDAEINTMQFTPLTDVNGNLQNAAAQRQGLKNFIANDKYLSKHRGEYTEKYAGQNPWIGQVDFRILQDFIFSPTKKPSTLQLSIDFVNLGNLVSSQWGVVKYATTSGYFQPLSVSYNGNSPVYQFDPSLTSTFTASPDLPSRWQMQVGLRYIF

Samples

Sample ID Description Type Environment
1 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
2 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
3 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
4 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
5 2738541278 Niastella sp. CF465 Isolate Unclassified
6 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
7 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
8 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
9 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
10 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
11 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
12 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
13 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
14 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
15 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
16 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
17 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
18 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
19 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
20 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
21 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
22 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
23 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
24 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
25 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
26 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
27 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
28 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
29 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
32 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
33 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
34 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
35 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
36 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
37 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
38 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
39 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
40 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
41 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
42 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
43 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
44 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
45 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
46 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
83 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
85 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
86 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
89 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
113 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
117 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
118 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
119 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
120 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
121 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
122 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
125 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
126 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
134 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
135 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
136 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
137 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
141 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
142 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
143 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
144 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
145 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
146 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
147 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
148 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
149 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
150 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.32
Metatranscriptomes 0
Isolates 12.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.63
Nodule 0
Rhizoplane 0
Rhizosphere 70.24
Stem 0
Stem Tuber 0
Unclassified 15.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000876 3300001979 Bacteria 13317
2 JGI25154J39366_1000003 3300002738 Bacteria 397627
3 JGI25153J46596_10005403 3300003215 Bacteria 6711
4 rootH1_10055331 3300003316 Bacteria 13942
5 rootH2_10008284 3300003320 Bacteria 49220
6 rootH2_10146152 3300003320 Bacteria 6154
7 rootH1_10031419 3300003323 Bacteria 15609
8 Ga0055528_1000180 3300003790 Bacteria 53597
9 Ga0055530_10002883 3300003791 Bacteria 10469
10 Ga0055531_10000068 3300003794 Bacteria 112187
11 Ga0065165_1000019 3300005262 Bacteria 271815
12 Ga0065714_10003457 3300005288 Bacteria 7476
13 Ga0070670_100044725 3300005331 Bacteria 3806
14 Ga0068869_100017988 3300005334 Unclassified 4803
15 Ga0070666_10000056 3300005335 Bacteria 91596
16 Ga0070689_100002477 3300005340 Bacteria 12065
17 Ga0070668_100032780 3300005347 Bacteria 3953
18 Ga0070669_100002129 3300005353 Bacteria 14312
19 Ga0070675_100008892 3300005354 Bacteria 7807
20 Ga0070673_100001721 3300005364 Bacteria 13004
21 Ga0070667_100050645 3300005367 Bacteria 3501
22 Ga0070698_100006662 3300005471 Bacteria 12525
23 Ga0070698_100013395 3300005471 Bacteria 8679
24 Ga0068853_100000802 3300005539 Bacteria 21843
25 Ga0068853_100009421 3300005539 Bacteria 7867
26 Ga0070665_100000009 3300005548 Bacteria 562640
27 Ga0068852_100001171 3300005616 Bacteria 17366
28 Ga0068859_100000304 3300005617 Bacteria 48852
29 Ga0068859_100019252 3300005617 Bacteria 6857
30 Ga0068864_100009323 3300005618 Bacteria 8094
31 Ga0068861_100006629 3300005719 Bacteria 7900
32 Ga0068851_10000080 3300005834 Bacteria 54078
33 Ga0068863_100007690 3300005841 Bacteria 10540
34 Ga0068863_100022813 3300005841 Bacteria 5980
35 Ga0068863_100026372 3300005841 Bacteria 5544
36 Ga0068858_100005678 3300005842 Bacteria 12195
37 Ga0068860_100000103 3300005843 Bacteria 139076
38 Ga0068860_100008478 3300005843 Bacteria 10244
39 Ga0068860_100011009 3300005843 Bacteria 8919
40 Ga0068860_100032456 3300005843 Bacteria 5017
41 Ga0068860_100038230 3300005843 Bacteria 4591
42 Ga0068862_100002959 3300005844 Bacteria 14832
43 Ga0068862_100033940 3300005844 Bacteria 4316
44 Ga0075366_10016156 3300006195 Bacteria 4287
45 Ga0097621_100002482 3300006237 Bacteria 12635
46 Ga0097621_100005188 3300006237 Bacteria 9153
47 Ga0068871_100011961 3300006358 Bacteria 6389
48 Ga0068871_100016167 3300006358 Bacteria 5609
49 Ga0075428_100004788 3300006844 Bacteria 14994
50 Ga0075430_100004947 3300006846 Bacteria 11210
51 Ga0097620_100000304 3300006931 Bacteria 48852
52 Ga0097620_100019255 3300006931 Bacteria 6857
53 Ga0105244_10000035 3300009036 Bacteria 168428
54 Ga0105240_10000095 3300009093 Bacteria 180935
55 Ga0105240_10000155 3300009093 Bacteria 140485
56 Ga0105240_10001038 3300009093 Bacteria 49382
57 Ga0105240_10025491 3300009093 Bacteria 7769
58 Ga0111539_10007542 3300009094 Bacteria 13914
59 Ga0114129_10004138 3300009147 Bacteria 20495
60 Ga0105241_10002316 3300009174 Bacteria 14311
61 Ga0105237_10000061 3300009545 Bacteria 146107
62 Ga0105237_10001644 3300009545 Bacteria 29007
63 Ga0105237_10002264 3300009545 Bacteria 23954
64 Ga0105237_10005887 3300009545 Bacteria 13747
65 Ga0105238_10027837 3300009551 Bacteria 5760
66 Ga0105249_10005812 3300009553 Bacteria 10668
67 Ga0105249_10005821 3300009553 Bacteria 10664
68 Ga0105249_10006698 3300009553 Bacteria 10035
69 Ga0105249_10022441 3300009553 Bacteria 5653
70 Ga0105239_10000140 3300010375 Bacteria 101896
71 Ga0105239_10000614 3300010375 Bacteria 50708
72 Ga0105239_10004338 3300010375 Bacteria 16991
73 Ga0105239_10006659 3300010375 Bacteria 13359
74 Ga0157373_10013337 3300013100 Bacteria 6030
75 Ga0157374_10000004 3300013296 Bacteria 759774
76 Ga0157374_10008926 3300013296 Bacteria 8591
77 Ga0157378_10002976 3300013297 Bacteria 15054
78 Ga0163162_10001236 3300013306 Bacteria 23879
79 Ga0163162_10030556 3300013306 Bacteria 5338
80 Ga0157375_10013089 3300013308 Bacteria 7375
81 Ga0157380_10002419 3300014326 Bacteria 12572
82 Ga0157380_10007413 3300014326 Bacteria 7789
83 Ga0157380_10009721 3300014326 Bacteria 6902
84 Ga0157379_10027731 3300014968 Bacteria 5041
85 Ga0157376_10015695 3300014969 Bacteria 5729
86 Ga0182005_1000219 3300015265 Bacteria 37730
87 Ga0163161_10000007 3300017792 Bacteria 301614
88 Ga0163161_10015495 3300017792 Bacteria 5315
89 Ga0209436_102502 3300025208 Bacteria 5485
90 Ga0209258_100161 3300025242 Bacteria 151992
91 Ga0209646_1000004 3300025246 Bacteria 786587
92 Ga0209026_1000132 3300025250 Bacteria 119048
93 Ga0209148_1000161 3300025254 Bacteria 138759
94 Ga0209673_1000042 3300025273 Bacteria 300704
95 Ga0209130_1000735 3300025284 Bacteria 28852
96 Ga0209050_1000308 3300025298 Bacteria 99516
97 Ga0207426_1000034 3300025302 Bacteria 454016
98 Ga0207426_1000316 3300025302 Bacteria 94148
99 Ga0207426_1002967 3300025302 Bacteria 9931
100 Ga0209257_1000001 3300025304 Bacteria 2274655
101 Ga0209257_1001059 3300025304 Bacteria 36382
102 Ga0207656_10000051 3300025321 Bacteria 45971
103 Ga0207655_1000008 3300025728 Bacteria 734289
104 Ga0207645_10010468 3300025907 Bacteria 6368
105 Ga0207654_10003651 3300025911 Bacteria 7758
106 Ga0207695_10000043 3300025913 Bacteria 444585
107 Ga0207695_10000165 3300025913 Bacteria 195908
108 Ga0207695_10005392 3300025913 Bacteria 16989
109 Ga0207695_10026153 3300025913 Bacteria 6515
110 Ga0207671_10001914 3300025914 Bacteria 23114
111 Ga0207671_10003616 3300025914 Bacteria 15269
112 Ga0207671_10005594 3300025914 Bacteria 11543
113 Ga0207671_10006116 3300025914 Bacteria 10824
114 Ga0207671_10010986 3300025914 Bacteria 7414
115 Ga0207659_10004097 3300025926 Bacteria 8793
116 Ga0207706_10010977 3300025933 Bacteria 8258
117 Ga0207670_10010424 3300025936 Bacteria 5354
118 Ga0207691_10023675 3300025940 Bacteria 5782
119 Ga0207689_10001842 3300025942 Bacteria 20053
120 Ga0207689_10002171 3300025942 Bacteria 18459
121 Ga0207689_10002652 3300025942 Bacteria 16551
122 Ga0207679_10001478 3300025945 Bacteria 14731
123 Ga0207712_10004343 3300025961 Bacteria 8955
124 Ga0207639_10015312 3300026041 Bacteria 5408
125 Ga0207641_10000391 3300026088 Bacteria 51728
126 Ga0207641_10000957 3300026088 Bacteria 29671
127 Ga0207648_10018900 3300026089 Bacteria 6224
128 Ga0207648_10021837 3300026089 Bacteria 5750
129 Ga0207676_10016643 3300026095 Bacteria 5326
130 Ga0207674_10003145 3300026116 Bacteria 20348
131 Ga0207674_10009489 3300026116 Bacteria 11111
132 Ga0207675_100001343 3300026118 Bacteria 24671
133 Ga0207698_10001741 3300026142 Bacteria 12689
134 Ga0207428_10023834 3300027907 Bacteria 5140
135 Ga0268266_10000105 3300028379 Bacteria 176691
136 Ga0268264_10000013 3300028381 Bacteria 513859
137 Ga0268264_10001952 3300028381 Bacteria 18525
138 Ga0268264_10004023 3300028381 Bacteria 12591
139 Ga0268264_10028205 3300028381 Bacteria 4591
140 Ga0268264_10041106 3300028381 Bacteria 3822
141 Ga0307515_10000684 3300028794 Bacteria 78055
142 Ga0307511_10000135 3300030521 Bacteria 67934
143 Ga0307408_100002868 3300031548 Bacteria 11941
144 Ga0307508_10000438 3300031616 Bacteria 49716
145 Ga0307516_10003195 3300031730 Bacteria 21307
146 Ga0307413_10005723 3300031824 Bacteria 5586
147 Ga0307410_10000075 3300031852 Bacteria 34266
148 Ga0307406_10000038 3300031901 Bacteria 76386
149 Ga0307414_10000001 3300032004 Bacteria 1352954
150 Ga0307411_10000013 3300032005 Bacteria 145335
151 Ga0466972_0000047 3300044658 Bacteria 122901
152 Ga0466972_0002653 3300044658 Bacteria 8855
153 Ga0466957_0000205 3300044842 Bacteria 27570
154 Ga0495606_0021469 3300046507 Bacteria 4728
155 Ga0495633_0000296 3300046558 Bacteria 56728
156 Ga0495611_0000025 3300046648 Bacteria 118583
157 Ga0495687_000010 3300047443 Bacteria 413735
158 Ga0495686_0000086 3300047472 Bacteria 197490
159 Ga0495686_0008588 3300047472 Bacteria 7476
160 Ga0496121_0000028 3300048924 Bacteria 439193
161 Ga0501238_000035 3300049671 Bacteria 23620
162 Ga0501225_0000864 3300049705 Bacteria 9412
163 Ga0501241_000182 3300049758 Bacteria 14117
164 Ga0501266_000007 3300049763 Bacteria 291751
165 nmdc:mga0k408_15550_c1 3300050493 Bacteria 4208
166 nmdc:mga05p37_9986_c1 3300050507 Bacteria 11271
167 nmdc:mga08y16_10894_c1 3300050511 Bacteria 9551
168 Ga0500578_0000765 3300053086 Bacteria 37890
169 Ga0500644_0000227 3300053088 Bacteria 32271
170 Ga0500583_0000003 3300053092 Bacteria 229587
171 Ga0500583_0001398 3300053092 Bacteria 6911
172 Ga0500641_0000006 3300053096 Bacteria 223991
173 Ga0500641_0000615 3300053096 Bacteria 12858
174 Ga0500658_0000013 3300053134 Bacteria 153702
175 Ga0500559_0005610 3300053136 Bacteria 5752
176 Ga0500577_0002562 3300053142 Bacteria 4656
177 Ga0500622_0001907 3300053156 Bacteria 15724
178 Ga0500622_0002044 3300053156 Bacteria 15039
179 Ga0500611_000013 3300053727 Bacteria 135447

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053136 Ga0500559_0005610 Ga0500559_0005610_1311_4478 975
2 3300053134 Ga0500658_0000013 Ga0500658_0000013_139311_142481 976
3 3300009036 Ga0105244_10000035 Ga0105244_100000353 979
4 3300025728 Ga0207655_1000008 Ga0207655_1000008169 979
5 3300017792 Ga0163161_10000007 Ga0163161_10000007118 980
6 3300053096 Ga0500641_0000006 Ga0500641_0000006_212608_215778 980
7 3300031901 Ga0307406_10000038 Ga0307406_1000003836 983
8 3300032004 Ga0307414_10000001 Ga0307414_10000001730 983
9 3300053096 Ga0500641_0000615 Ga0500641_0000615_352_3522 987
10 3300031824 Ga0307413_10005723 Ga0307413_100057233 989
11 3300032005 Ga0307411_10000013 Ga0307411_10000013118 989
12 3300049763 Ga0501266_000007 Ga0501266_000007_256682_259861 989
13 3300049671 Ga0501238_000035 Ga0501238_000035_16248_19442 996
14 3300031548 Ga0307408_100002868 Ga0307408_1000028684 997
15 3300031852 Ga0307410_10000075 Ga0307410_1000007511 997
16 3300013296 Ga0157374_10000004 Ga0157374_10000004490 1025
17 iso_pu_bacteria 2738541279 2738731896 1026
18 iso_pu_bacteria 2738541285 2738764461 1026
19 iso_pu_bacteria 2738543007 2739213476 1026
20 iso_pu_bacteria 2739367857 2740000742 1026
21 iso_pu_bacteria 2739367858 2740005558 1026
22 iso_pu_bacteria 2513020052 2513235763 1027
23 iso_pu_bacteria 2643221600 2644011516 1027
24 iso_pu_bacteria 2643221667 2644369914 1027
25 iso_pu_bacteria 2857618242 2857619126 1027
26 iso_pu_bacteria 2919191525 2919193022 1027
27 iso_pu_bacteria 2929150217 2929153001 1027
28 iso_pu_bacteria 8054307821 8054308269 1027
29 iso_pu_bacteria 2643221716 2644642241 1028
30 iso_pu_bacteria 2857613821 2857614497 1028
31 iso_pu_bacteria 2904419702 2904419784 1028
32 iso_pu_bacteria 2904555929 2904556572 1028
33 3300005288 Ga0065714_10003457 Ga0065714_100034571 1030
34 3300005834 Ga0068851_10000080 Ga0068851_1000008017 1030
35 3300009553 Ga0105249_10022441 Ga0105249_100224413 1030
36 3300014326 Ga0157380_10002419 Ga0157380_100024197 1030
37 3300025321 Ga0207656_10000051 Ga0207656_1000005132 1030
38 3300014968 Ga0157379_10027731 Ga0157379_100277313 1033
39 3300009545 Ga0105237_10001644 Ga0105237_100016447 1034
40 3300013306 Ga0163162_10001236 Ga0163162_1000123617 1034
41 3300005843 Ga0068860_100038230 Ga0068860_1000382302 1038
42 3300009545 Ga0105237_10005887 Ga0105237_100058872 1038
43 3300010375 Ga0105239_10006659 Ga0105239_1000665914 1038
44 3300025914 Ga0207671_10003616 Ga0207671_100036162 1038
45 3300028381 Ga0268264_10028205 Ga0268264_100282052 1038
46 3300009093 Ga0105240_10025491 Ga0105240_100254912 1042
47 3300009553 Ga0105249_10005821 Ga0105249_100058215 1042
48 3300010375 Ga0105239_10000140 Ga0105239_1000014064 1042
49 3300025914 Ga0207671_10010986 Ga0207671_100109866 1042
50 3300025961 Ga0207712_10004343 Ga0207712_100043434 1042
51 3300005347 Ga0070668_100032780 Ga0070668_1000327802 1044
52 3300025942 Ga0207689_10002652 Ga0207689_100026527 1044
53 3300010375 Ga0105239_10000614 Ga0105239_1000061441 1046
54 3300044658 Ga0466972_0002653 Ga0466972_0002653_5493_8675 1046
55 3300047443 Ga0495687_000010 Ga0495687_000010_44846_48001 1047
56 3300005334 Ga0068869_100017988 Ga0068869_1000179882 1049
57 3300005335 Ga0070666_10000056 Ga0070666_1000005650 1049
58 3300005617 Ga0068859_100000304 Ga0068859_10000030431 1049
59 3300005618 Ga0068864_100009323 Ga0068864_1000093231 1049
60 3300005842 Ga0068858_100005678 Ga0068858_1000056788 1049
61 3300006931 Ga0097620_100000304 Ga0097620_10000030431 1049
62 3300025911 Ga0207654_10003651 Ga0207654_100036513 1049
63 3300025942 Ga0207689_10001842 Ga0207689_1000184213 1049
64 3300026095 Ga0207676_10016643 Ga0207676_100166433 1049
65 3300005616 Ga0068852_100001171 Ga0068852_1000011716 1050
66 3300005841 Ga0068863_100007690 Ga0068863_1000076909 1050
67 3300005843 Ga0068860_100008478 Ga0068860_1000084785 1050
68 3300025914 Ga0207671_10001914 Ga0207671_1000191413 1050
69 3300026088 Ga0207641_10000957 Ga0207641_1000095722 1050
70 3300026142 Ga0207698_10001741 Ga0207698_100017416 1050
71 3300028381 Ga0268264_10004023 Ga0268264_100040233 1050
72 3300005367 Ga0070667_100050645 Ga0070667_1000506451 1052
73 3300005843 Ga0068860_100032456 Ga0068860_1000324562 1052
74 3300005844 Ga0068862_100033940 Ga0068862_1000339402 1052
75 3300044658 Ga0466972_0000047 Ga0466972_0000047_51646_54945 1053
76 3300005843 Ga0068860_100000103 Ga0068860_10000010341 1054
77 3300028381 Ga0268264_10000013 Ga0268264_10000013279 1054
78 3300005548 Ga0070665_100000009 Ga0070665_10000000958 1055
79 3300028379 Ga0268266_10000105 Ga0268266_1000010587 1055
80 3300053086 Ga0500578_0000765 Ga0500578_0000765_28270_31497 1055
81 3300005340 Ga0070689_100002477 Ga0070689_1000024777 1056
82 3300005353 Ga0070669_100002129 Ga0070669_1000021298 1056
83 3300005354 Ga0070675_100008892 Ga0070675_1000088925 1056
84 3300005364 Ga0070673_100001721 Ga0070673_1000017219 1056
85 3300005617 Ga0068859_100019252 Ga0068859_1000192523 1056
86 3300005719 Ga0068861_100006629 Ga0068861_1000066293 1056
87 3300005844 Ga0068862_100002959 Ga0068862_10000295911 1056
88 3300006931 Ga0097620_100019255 Ga0097620_1000192553 1056
89 3300009094 Ga0111539_10007542 Ga0111539_100075423 1056
90 3300009553 Ga0105249_10005812 Ga0105249_100058127 1056
91 3300013308 Ga0157375_10013089 Ga0157375_100130894 1056
92 3300025926 Ga0207659_10004097 Ga0207659_100040973 1056
93 3300025936 Ga0207670_10010424 Ga0207670_100104245 1056
94 3300026116 Ga0207674_10009489 Ga0207674_1000948911 1056
95 3300026118 Ga0207675_100001343 Ga0207675_10000134311 1056
96 3300027907 Ga0207428_10023834 Ga0207428_100238343 1056
97 3300050511 nmdc:mga08y16_10894_c1 nmdc:mga08y16_10894_c1_293_3526 1056
98 3300005841 Ga0068863_100026372 Ga0068863_1000263722 1057
99 3300014326 Ga0157380_10007413 Ga0157380_100074132 1057
100 3300026088 Ga0207641_10000391 Ga0207641_1000039125 1057
101 3300049758 Ga0501241_000182 Ga0501241_000182_10062_13286 1059
102 3300053092 Ga0500583_0001398 Ga0500583_0001398_2317_5508 1059
103 3300053156 Ga0500622_0001907 Ga0500622_0001907_10429_13620 1059
104 3300005331 Ga0070670_100044725 Ga0070670_1000447251 1060
105 3300006237 Ga0097621_100005188 Ga0097621_1000051886 1060
106 3300006358 Ga0068871_100016167 Ga0068871_1000161672 1060
107 3300003320 rootH2_10008284 rootH2_1000828423 1061
108 3300005841 Ga0068863_100022813 Ga0068863_1000228134 1061
109 3300005843 Ga0068860_100011009 Ga0068860_1000110095 1061
110 3300025940 Ga0207691_10023675 Ga0207691_100236751 1061
111 3300028381 Ga0268264_10001952 Ga0268264_100019527 1061
112 3300003320 rootH2_10146152 rootH2_101461524 1062
113 3300050493 nmdc:mga0k408_15550_c1 nmdc:mga0k408_15550_c1_985_4173 1062
114 iso_pu_bacteria 2929177148 2929179395 1062
115 iso_pu_bacteria 2945977869 2945981803 1062
116 iso_pu_bacteria 2946013367 2946018796 1062
117 3300006237 Ga0097621_100002482 Ga0097621_10000248211 1063
118 3300006358 Ga0068871_100011961 Ga0068871_1000119611 1063
119 3300009545 Ga0105237_10002264 Ga0105237_1000226421 1063
120 3300013297 Ga0157378_10002976 Ga0157378_100029763 1063
121 3300013306 Ga0163162_10030556 Ga0163162_100305562 1063
122 3300047472 Ga0495686_0000086 Ga0495686_0000086_111800_115018 1063
123 3300025208 Ga0209436_102502 Ga0209436_1025022 1066
124 3300025284 Ga0209130_1000735 Ga0209130_100073511 1066
125 3300025302 Ga0207426_1000034 Ga0207426_1000034125 1066
126 iso_pu_bacteria 2818991442 2819572960 1066
127 iso_pu_bacteria 2821136567 2821139621 1066
128 iso_pu_bacteria 2904467357 2904471743 1066
129 iso_pu_bacteria 2929239360 2929245629 1066
130 3300009093 Ga0105240_10001038 Ga0105240_1000103825 1067
131 3300009174 Ga0105241_10002316 Ga0105241_100023168 1067
132 3300009551 Ga0105238_10027837 Ga0105238_100278373 1067
133 3300025913 Ga0207695_10005392 Ga0207695_100053924 1067
134 3300025914 Ga0207671_10005594 Ga0207671_100055945 1067
135 3300028794 Ga0307515_10000684 Ga0307515_1000068460 1067
136 3300009545 Ga0105237_10000061 Ga0105237_1000006116 1068
137 3300025914 Ga0207671_10006116 Ga0207671_100061167 1068
138 3300028381 Ga0268264_10041106 Ga0268264_100411061 1069
139 3300003316 rootH1_10055331 rootH1_100553318 1070
140 3300003794 Ga0055531_10000068 Ga0055531_1000006830 1070
141 3300015265 Ga0182005_1000219 Ga0182005_10002199 1070
142 3300025242 Ga0209258_100161 Ga0209258_10016188 1070
143 3300025254 Ga0209148_1000161 Ga0209148_100016157 1070
144 3300025304 Ga0209257_1000001 Ga0209257_1000001482 1070
145 3300048924 Ga0496121_0000028 Ga0496121_0000028_254075_257299 1070
146 3300053088 Ga0500644_0000227 Ga0500644_0000227_13207_16431 1070
147 3300053142 Ga0500577_0002562 Ga0500577_0002562_579_3803 1070
148 3300053156 Ga0500622_0002044 Ga0500622_0002044_1396_4620 1070
149 3300006846 Ga0075430_100004947 Ga0075430_10000494711 1071
150 3300031616 Ga0307508_10000438 Ga0307508_100004384 1071
151 3300046558 Ga0495633_0000296 Ga0495633_0000296_27631_30861 1072
152 iso_pu_bacteria 2738541278 2738725819 1073
153 3300003215 JGI25153J46596_10005403 JGI25153J46596_100054032 1074
154 3300009553 Ga0105249_10006698 Ga0105249_100066987 1074
155 3300025302 Ga0207426_1000316 Ga0207426_100031663 1074
156 3300005471 Ga0070698_100013395 Ga0070698_1000133956 1075
157 3300006844 Ga0075428_100004788 Ga0075428_1000047885 1075
158 3300009147 Ga0114129_10004138 Ga0114129_100041385 1075
159 3300030521 Ga0307511_10000135 Ga0307511_1000013518 1075
160 3300044842 Ga0466957_0000205 Ga0466957_0000205_11811_15038 1075
161 3300050507 nmdc:mga05p37_9986_c1 nmdc:mga05p37_9986_c1_4367_7600 1075
162 3300005471 Ga0070698_100006662 Ga0070698_1000066628 1076
163 3300010375 Ga0105239_10004338 Ga0105239_1000433811 1076
164 3300003323 rootH1_10031419 rootH1_100314195 1077
165 3300005539 Ga0068853_100000802 Ga0068853_10000080215 1077
166 3300013100 Ga0157373_10013337 Ga0157373_100133373 1077
167 3300013296 Ga0157374_10008926 Ga0157374_100089264 1077
168 3300014969 Ga0157376_10015695 Ga0157376_100156953 1077
169 3300017792 Ga0163161_10015495 Ga0163161_100154953 1077
170 3300025933 Ga0207706_10010977 Ga0207706_100109778 1077
171 3300025942 Ga0207689_10002171 Ga0207689_100021711 1077
172 3300025945 Ga0207679_10001478 Ga0207679_100014786 1077
173 3300026041 Ga0207639_10015312 Ga0207639_100153124 1077
174 3300026089 Ga0207648_10021837 Ga0207648_100218372 1077
175 3300026116 Ga0207674_10003145 Ga0207674_100031455 1077
176 3300049705 Ga0501225_0000864 Ga0501225_0000864_2775_6011 1077
177 3300053092 Ga0500583_0000003 Ga0500583_0000003_52661_55981 1077
178 iso_pu_bacteria 2929921140 2929922260 1077
179 iso_pu_bacteria 8003151029 8003154785 1077
180 3300003790 Ga0055528_1000180 Ga0055528_100018019 1078
181 3300003791 Ga0055530_10002883 Ga0055530_100028834 1078
182 3300005262 Ga0065165_1000019 Ga0065165_1000019169 1078
183 3300014326 Ga0157380_10009721 Ga0157380_100097212 1078
184 3300025273 Ga0209673_1000042 Ga0209673_100004281 1078
185 3300025298 Ga0209050_1000308 Ga0209050_100030837 1078
186 3300025302 Ga0207426_1002967 Ga0207426_10029678 1078
187 3300025304 Ga0209257_1001059 Ga0209257_100105926 1078
188 3300046507 Ga0495606_0021469 Ga0495606_0021469_1390_4629 1078
189 3300046648 Ga0495611_0000025 Ga0495611_0000025_10437_13700 1078
190 3300047472 Ga0495686_0008588 Ga0495686_0008588_2669_5908 1078
191 3300006195 Ga0075366_10016156 Ga0075366_100161562 1079
192 3300025907 Ga0207645_10010468 Ga0207645_100104684 1079
193 3300031730 Ga0307516_10003195 Ga0307516_100031958 1079
194 3300053727 Ga0500611_000013 Ga0500611_000013_40184_43423 1079
195 3300005539 Ga0068853_100009421 Ga0068853_1000094213 1080
196 3300009093 Ga0105240_10000095 Ga0105240_1000009579 1080
197 3300009093 Ga0105240_10000155 Ga0105240_1000015577 1080
198 3300025913 Ga0207695_10000043 Ga0207695_1000004394 1080
199 3300025913 Ga0207695_10000165 Ga0207695_1000016595 1080
200 3300025913 Ga0207695_10026153 Ga0207695_100261533 1080
201 3300026089 Ga0207648_10018900 Ga0207648_100189004 1080
202 3300001979 JGI24740J21852_10000876 JGI24740J21852_100008768 1081
203 3300002738 JGI25154J39366_1000003 JGI25154J39366_1000003278 1081
204 3300025246 Ga0209646_1000004 Ga0209646_100000461 1081
205 3300025250 Ga0209026_1000132 Ga0209026_100013211 1081

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

60

142

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.891 34 116
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8508 34 116
1qmu-assembly1.cif.gz_A duck carboxypeptidase d domain ii 0.8494 34 116
6fwv-assembly2.cif.gz_B the bacillus anthracis tie protein 0.8406 31 116
6fwv-assembly1.cif.gz_A the bacillus anthracis tie protein 0.8405 31 116
ID Description Score Start End Superfamily
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8859 34 116 2.60.40.1120
af_E7FFQ7_1118_1203_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8589 35 121 2.60.40.1120
af_P0CG96_23_100_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8568 35 115 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8556 34 116 2.60.40.1120
af_Q54I77_467_541_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8553 35 115 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A660XX46-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9395 29 116
AF-X1ELE3-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.916 29 116 GO:0030246
AF-A0A090WSJ3-F1-model_v4 Oar protein 0.8956 579 1026 GO:0009279
GO:0015344
AF-A0A2G9Z069-F1-model_v4 Uncharacterized protein 0.8927 24 116 GO:0016020
AF-A0A524NZB5-F1-model_v4 TonB-dependent receptor 0.8867 371 1081 GO:0009279
GO:0015344

Feature Viewer

pLDDT pTM Quality
76.26 0.76 High
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Predicted Structure (AlphaFold2)

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