F313641

General Info

Members Datasets Scaffolds Average Seq Length
205 132 410 449

Family's Representative Sequence

Representative Sequence 3300005983|Ga0081540_1075003|Ga0081540_10750031
Length 483
Sequence MAHSILIVDDEPGIRQSLTGVLEDEGFAVATAASGEECLQAFEQRLFSCVLLDVWLPGIDGLETLARLKANYPDTSVVMISGHGRIETAVRATKLGAYDFIEKPLSLEKTILAVKNAIRQRELETTNTELQEKLERGYAMIGDSVPMRALRQQIAYAAPTSGRVLIYGESGTGKELVARALHSNSLRSSRPFIEVNCAAIPDELIESELFGHIKGAFTGATQARRGKFERADGATLFLDEVGDMSLKTQSKVLRALEEQRFEPVGSETSITVDTRVIAATNKRLEAEIEGGAFRADLFYRLRVVQIDLPPLRARREDVPMLAENFLQTYAKRYQLKCVEIGPDAMKRLVAYDWPGNVRELRNAIERSAVLADGKSLRPEDLPEEIRSAQPSQKPAETFQRSSPAKTVETADVLPIPYLEDFREARREFERAYIERVLVETGGNVTRAAERVGMHRQSLQQKLKALGLTRRYVLQDEAQDSDDE

Samples

Sample ID Description Type Environment
1 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
84 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
85 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
88 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
92 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
93 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
94 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
95 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
96 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
97 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
98 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
99 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
108 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.51
Metatranscriptomes 0.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.93
Rhizosphere 81.95
Stem 0
Stem Tuber 0
Unclassified 0.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081540_1075003 3300005983 Bacteria 1547
2 LJQas_1000011 3300000549 Bacteria 28640
3 Ga0065715_10109971 3300005293 Bacteria 2638
4 Ga0065715_10123228 3300005293 Bacteria 2183
5 Ga0070658_10004343 3300005327 Bacteria 11567
6 Ga0070683_100081675 3300005329 Bacteria 3026
7 Ga0070690_100002086 3300005330 Bacteria 10678
8 Ga0070670_100000866 3300005331 Bacteria 23779
9 Ga0070666_10003010 3300005335 Bacteria 10219
10 Ga0070682_100000214 3300005337 Bacteria 42673
11 Ga0068868_100001135 3300005338 Bacteria 18180
12 Ga0070689_100025514 3300005340 Bacteria 4441
13 Ga0070671_100096928 3300005355 Bacteria 2473
14 Ga0070667_100000589 3300005367 Bacteria 35617
15 Ga0070700_100026665 3300005441 Bacteria 3416
16 Ga0070694_100018813 3300005444 Bacteria 4389
17 Ga0070681_10006643 3300005458 Bacteria 11259
18 Ga0070706_100000691 3300005467 Bacteria 38197
19 Ga0070707_100000023 3300005468 Bacteria 128989
20 Ga0070707_100001301 3300005468 Bacteria 24512
21 Ga0070707_100036426 3300005468 Bacteria 4695
22 Ga0070698_100107402 3300005471 Bacteria 2759
23 Ga0070697_100128376 3300005536 Bacteria 2125
24 Ga0070697_100150527 3300005536 Bacteria 1961
25 Ga0070672_100001811 3300005543 Bacteria 13350
26 Ga0070686_100005172 3300005544 Bacteria 7204
27 Ga0070696_100152240 3300005546 Bacteria 1698
28 Ga0068855_100164900 3300005563 Bacteria 2512
29 Ga0070664_100001367 3300005564 Bacteria 19437
30 Ga0068857_100053841 3300005577 Bacteria 3570
31 Ga0068859_100043690 3300005617 Bacteria 4504
32 Ga0068859_100044696 3300005617 Bacteria 4450
33 Ga0068859_100050226 3300005617 Bacteria 4190
34 Ga0068864_100012767 3300005618 Bacteria 6944
35 Ga0068864_100029536 3300005618 Bacteria 4645
36 Ga0068864_100050078 3300005618 Bacteria 3594
37 Ga0068863_100060297 3300005841 Bacteria 3588
38 Ga0068860_100185580 3300005843 Bacteria 2011
39 Ga0068862_100076951 3300005844 Bacteria 2888
40 Ga0081455_10010340 3300005937 Bacteria 9481
41 Ga0081455_10099339 3300005937 Bacteria 2341
42 Ga0081539_10003246 3300005985 Bacteria 20457
43 Ga0081539_10003679 3300005985 Bacteria 18369
44 Ga0097621_100146363 3300006237 Bacteria 2023
45 Ga0068871_100253814 3300006358 Bacteria 1532
46 Ga0075428_100112235 3300006844 Bacteria 2969
47 Ga0075428_100227976 3300006844 Bacteria 2011
48 Ga0075431_100048493 3300006847 Bacteria 4381
49 Ga0075431_100074562 3300006847 Bacteria 3501
50 Ga0075431_100214229 3300006847 Bacteria 1966
51 Ga0075433_10000727 3300006852 Bacteria 22543
52 Ga0075433_10033476 3300006852 Bacteria 4406
53 Ga0075434_100002194 3300006871 Bacteria 17008
54 Ga0075434_100007572 3300006871 Bacteria 10060
55 Ga0075434_100279635 3300006871 Bacteria 1688
56 Ga0075429_100091823 3300006880 Bacteria 2648
57 Ga0097620_100043692 3300006931 Bacteria 4504
58 Ga0097620_100044693 3300006931 Bacteria 4450
59 Ga0097620_100050227 3300006931 Bacteria 4190
60 Ga0111539_10194035 3300009094 Bacteria 2369
61 Ga0105245_10125414 3300009098 Bacteria 2403
62 Ga0114129_10001700 3300009147 Bacteria 30029
63 Ga0114129_10027989 3300009147 Bacteria 7982
64 Ga0114129_10035335 3300009147 Bacteria 7060
65 Ga0114129_10205649 3300009147 Bacteria 2664
66 Ga0105248_10115149 3300009177 Bacteria 3032
67 Ga0105249_10015426 3300009553 Bacteria 6762
68 Ga0157373_10105016 3300013100 Bacteria 1987
69 Ga0157369_10124922 3300013105 Bacteria 2729
70 Ga0157374_10185694 3300013296 Bacteria 2032
71 Ga0157378_10002343 3300013297 Bacteria 16821
72 Ga0157375_10006038 3300013308 Bacteria 10562
73 Ga0157375_10185603 3300013308 Bacteria 2233
74 Ga0163163_10003944 3300014325 Bacteria 12662
75 Ga0163163_10027110 3300014325 Bacteria 5484
76 Ga0163163_10078950 3300014325 Bacteria 3289
77 Ga0163163_10189259 3300014325 Bacteria 2107
78 Ga0163163_10223612 3300014325 Bacteria 1931
79 Ga0157379_10061680 3300014968 Bacteria 3353
80 Ga0213875_10029672 3300021388 Bacteria 2593
81 Ga0207684_10069809 3300025910 Bacteria 2986
82 Ga0207684_10115153 3300025910 Bacteria 2302
83 Ga0207707_10003887 3300025912 Bacteria 13249
84 Ga0207649_10021986 3300025920 Bacteria 3681
85 Ga0207646_10000019 3300025922 Bacteria 282855
86 Ga0207646_10000077 3300025922 Bacteria 134395
87 Ga0207646_10001166 3300025922 Bacteria 33336
88 Ga0207646_10167845 3300025922 Bacteria 1981
89 Ga0207646_10191364 3300025922 Bacteria 1848
90 Ga0207650_10000801 3300025925 Bacteria 24145
91 Ga0207650_10000920 3300025925 Bacteria 22193
92 Ga0207650_10024913 3300025925 Bacteria 4259
93 Ga0207659_10036041 3300025926 Bacteria 3423
94 Ga0207659_10177686 3300025926 Bacteria 1684
95 Ga0207687_10050156 3300025927 Unclassified 2904
96 Ga0207670_10003939 3300025936 Bacteria 7924
97 Ga0207691_10003489 3300025940 Bacteria 15304
98 Ga0207691_10020372 3300025940 Bacteria 6269
99 Ga0207711_10006818 3300025941 Bacteria 9598
100 Ga0207689_10041909 3300025942 Bacteria 3788
101 Ga0207689_10172633 3300025942 Bacteria 1782
102 Ga0207679_10026511 3300025945 Bacteria 3996
103 Ga0207667_10099597 3300025949 Bacteria 2999
104 Ga0207708_10087102 3300026075 Bacteria 2404
105 Ga0207648_10031786 3300026089 Bacteria 4665
106 Ga0207676_10025156 3300026095 Bacteria 4416
107 Ga0207674_10008492 3300026116 Bacteria 11861
108 Ga0207674_10016790 3300026116 Bacteria 8002
109 Ga0207674_10032595 3300026116 Bacteria 5463
110 Ga0207698_10225528 3300026142 Bacteria 1697
111 Ga0207428_10019999 3300027907 Bacteria 5701
112 Ga0265760_10000001 3300031090 Bacteria 217786
113 Ga0307408_100030632 3300031548 Bacteria 3738
114 Ga0316575_10003927 3300031665 Bacteria 5198
115 Ga0307405_10010520 3300031731 Bacteria 4801
116 Ga0307405_10117879 3300031731 Bacteria 1811
117 Ga0307406_10155206 3300031901 Bacteria 1638
118 Ga0307407_10010383 3300031903 Bacteria 4390
119 Ga0307409_100097859 3300031995 Bacteria 2424
120 Ga0307416_100006244 3300032002 Bacteria 7440
121 Ga0307416_100023646 3300032002 Bacteria 4465
122 Ga0307411_10012007 3300032005 Bacteria 4704
123 Ga0316583_10013595 3300032133 Bacteria 2938
124 Ga0316583_10052391 3300032133 Bacteria 1436
125 Ga0373957_0019248 3300035120 Bacteria 2400
126 Ga0373955_0019195 3300035172 Bacteria 3413
127 Ga0373937_0052456 3300036401 Bacteria 3739
128 Ga0373937_0083192 3300036401 Bacteria 2961
129 Ga0373937_0266335 3300036401 Bacteria 1617
130 Ga0316582_0016225 3300036647 Bacteria 4281
131 Ga0316584_0028132 3300036712 Bacteria 4143
132 Ga0395905_0017263 3300037471 Bacteria 6855
133 Ga0436364_0767078 3300037853 Bacteria 1539
134 Ga0400484_06690 3300038725 Bacteria 13462
135 Ga0400490_09006 3300038726 Bacteria 131367
136 Ga0400490_09859 3300038726 Bacteria 4102
137 Ga0400491_04683 3300038727 Bacteria 1626
138 Ga0400491_13354 3300038727 Bacteria 3125
139 Ga0400491_29415 3300038727 Bacteria 5139
140 Ga0400485_01287 3300038735 Bacteria 8650
141 Ga0400485_07106 3300038735 Bacteria 34271
142 Ga0400485_10511 3300038735 Bacteria 11370
143 Ga0400485_12953 3300038735 Bacteria 10256
144 Ga0400488_02746 3300038741 Bacteria 2679
145 Ga0400488_20927 3300038741 Bacteria 10957
146 Ga0400488_61560 3300038741 Bacteria 6519
147 Ga0400486_08631 3300038742 Bacteria 3472
148 Ga0400486_12355 3300038742 Bacteria 46945
149 Ga0400486_16840 3300038742 Bacteria 17871
150 Ga0400486_25600 3300038742 Bacteria 31060
151 Ga0400486_30854 3300038742 Bacteria 55977
152 Ga0400483_010828 3300039062 Bacteria 25274
153 Ga0400483_018619 3300039062 Bacteria 11660
154 Ga0400483_034219 3300039062 Bacteria 29338
155 Ga0400483_201005 3300039062 Bacteria 4377
156 Ga0400489_34096 3300039093 Bacteria 16956
157 Ga0400489_36589 3300039093 Bacteria 22091
158 Ga0400489_79482 3300039093 Bacteria 4305
159 Ga0400487_34922 3300039110 Bacteria 34543
160 Ga0400487_50876 3300039110 Bacteria 2008
161 Ga0436365_0281057 3300039437 Bacteria 1780
162 Ga0436365_0407870 3300039437 Bacteria 2482
163 Ga0451577_0164459 3300042876 Bacteria 1999
164 Ga0453683_0004543 3300044673 Bacteria 9828
165 Ga0495662_0083480 3300046476 Bacteria 1555
166 Ga0495608_0008293 3300046511 Bacteria 7293
167 Ga0495618_0041767 3300046514 Bacteria 2889
168 Ga0495630_0104950 3300046517 Bacteria 2139
169 Ga0495663_0000068 3300046525 Bacteria 47393
170 Ga0495621_0001189 3300046539 Bacteria 6722
171 Ga0495667_0000141 3300046559 Bacteria 49205
172 Ga0495667_0176028 3300046559 Bacteria 1374
173 Ga0495668_0004187 3300046616 Bacteria 10412
174 Ga0495657_0004047 3300046675 Bacteria 11759
175 Ga0495674_0003833 3300047319 Bacteria 14606
176 Ga0495675_0060243 3300047444 Bacteria 2406
177 Ga0495684_0200052 3300047471 Bacteria 1473
178 Ga0496108_0022223 3300048911 Bacteria 5216
179 Ga0496109_0000023 3300048912 Bacteria 187904
180 Ga0496109_0000092 3300048912 Bacteria 93568
181 Ga0496112_0011792 3300048915 Bacteria 8001
182 Ga0496112_0219006 3300048915 Bacteria 1860
183 Ga0496113_0107070 3300048916 Bacteria 2172
184 Ga0501041_0013255 3300049577 Bacteria 4884
185 Ga0501042_0063959 3300049578 Bacteria 2629
186 Ga0501048_0036736 3300049582 Bacteria 3521
187 Ga0501072_0048443 3300049588 Bacteria 3347
188 Ga0501075_0040635 3300049591 Bacteria 3484
189 Ga0501076_0030175 3300049592 Bacteria 4223
190 Ga0501045_0054212 3300049824 Bacteria 2931
191 nmdc:mga05p37_216063_c1 3300050507 Bacteria 2316
192 nmdc:mga06r32_10840_c1 3300050510 Bacteria 8208
193 nmdc:mga06r32_18904_c1 3300050510 Bacteria 6317
194 nmdc:mga06r32_62765_c1 3300050510 Bacteria 3580
195 nmdc:mga06r32_92511_c1 3300050510 Bacteria 2957
196 nmdc:mga08y16_148594_c1 3300050511 Bacteria 2436
197 nmdc:mga08y16_21852_c1 3300050511 Bacteria 6752
198 nmdc:mga08y16_7232_c1 3300050511 Bacteria 11651
199 nmdc:mga0n895_5754_c1 3300050512 Bacteria 10403
200 nmdc:mga0n895_6304_c1 3300050512 Bacteria 10059
201 nmdc:mga0rr50_282224_c1 3300050513 Bacteria 1386
202 nmdc:mga0a205_31969_c1 3300050515 Bacteria 5044
203 nmdc:mga0a205_36626_c1 3300050515 Bacteria 4715
204 nmdc:mga0a205_425_c1 3300050515 Bacteria 32435
205 Ga0501084_0072220 3300054114 Bacteria 2890
206 Ga0081540_1075003
207 LJQas_1000011
208 Ga0065715_10109971
209 Ga0065715_10123228
210 Ga0070658_10004343
211 Ga0070683_100081675
212 Ga0070690_100002086
213 Ga0070670_100000866
214 Ga0070666_10003010
215 Ga0070682_100000214
216 Ga0068868_100001135
217 Ga0070689_100025514
218 Ga0070671_100096928
219 Ga0070667_100000589
220 Ga0070700_100026665
221 Ga0070694_100018813
222 Ga0070681_10006643
223 Ga0070706_100000691
224 Ga0070707_100000023
225 Ga0070707_100001301
226 Ga0070707_100036426
227 Ga0070698_100107402
228 Ga0070697_100128376
229 Ga0070697_100150527
230 Ga0070672_100001811
231 Ga0070686_100005172
232 Ga0070696_100152240
233 Ga0068855_100164900
234 Ga0070664_100001367
235 Ga0068857_100053841
236 Ga0068859_100043690
237 Ga0068859_100044696
238 Ga0068859_100050226
239 Ga0068864_100012767
240 Ga0068864_100029536
241 Ga0068864_100050078
242 Ga0068863_100060297
243 Ga0068860_100185580
244 Ga0068862_100076951
245 Ga0081455_10010340
246 Ga0081455_10099339
247 Ga0081539_10003246
248 Ga0081539_10003679
249 Ga0097621_100146363
250 Ga0068871_100253814
251 Ga0075428_100112235
252 Ga0075428_100227976
253 Ga0075431_100048493
254 Ga0075431_100074562
255 Ga0075431_100214229
256 Ga0075433_10000727
257 Ga0075433_10033476
258 Ga0075434_100002194
259 Ga0075434_100007572
260 Ga0075434_100279635
261 Ga0075429_100091823
262 Ga0097620_100043692
263 Ga0097620_100044693
264 Ga0097620_100050227
265 Ga0111539_10194035
266 Ga0105245_10125414
267 Ga0114129_10001700
268 Ga0114129_10027989
269 Ga0114129_10035335
270 Ga0114129_10205649
271 Ga0105248_10115149
272 Ga0105249_10015426
273 Ga0157373_10105016
274 Ga0157369_10124922
275 Ga0157374_10185694
276 Ga0157378_10002343
277 Ga0157375_10006038
278 Ga0157375_10185603
279 Ga0163163_10003944
280 Ga0163163_10027110
281 Ga0163163_10078950
282 Ga0163163_10189259
283 Ga0163163_10223612
284 Ga0157379_10061680
285 Ga0213875_10029672
286 Ga0207684_10069809
287 Ga0207684_10115153
288 Ga0207707_10003887
289 Ga0207649_10021986
290 Ga0207646_10000019
291 Ga0207646_10000077
292 Ga0207646_10001166
293 Ga0207646_10167845
294 Ga0207646_10191364
295 Ga0207650_10000801
296 Ga0207650_10000920
297 Ga0207650_10024913
298 Ga0207659_10036041
299 Ga0207659_10177686
300 Ga0207687_10050156
301 Ga0207670_10003939
302 Ga0207691_10003489
303 Ga0207691_10020372
304 Ga0207711_10006818
305 Ga0207689_10041909
306 Ga0207689_10172633
307 Ga0207679_10026511
308 Ga0207667_10099597
309 Ga0207708_10087102
310 Ga0207648_10031786
311 Ga0207676_10025156
312 Ga0207674_10008492
313 Ga0207674_10016790
314 Ga0207674_10032595
315 Ga0207698_10225528
316 Ga0207428_10019999
317 Ga0265760_10000001
318 Ga0307408_100030632
319 Ga0316575_10003927
320 Ga0307405_10010520
321 Ga0307405_10117879
322 Ga0307406_10155206
323 Ga0307407_10010383
324 Ga0307409_100097859
325 Ga0307416_100006244
326 Ga0307416_100023646
327 Ga0307411_10012007
328 Ga0316583_10013595
329 Ga0316583_10052391
330 Ga0373957_0019248
331 Ga0373955_0019195
332 Ga0373937_0052456
333 Ga0373937_0083192
334 Ga0373937_0266335
335 Ga0316582_0016225
336 Ga0316584_0028132
337 Ga0395905_0017263
338 Ga0436364_0767078
339 Ga0400484_06690
340 Ga0400490_09006
341 Ga0400490_09859
342 Ga0400491_04683
343 Ga0400491_13354
344 Ga0400491_29415
345 Ga0400485_01287
346 Ga0400485_07106
347 Ga0400485_10511
348 Ga0400485_12953
349 Ga0400488_02746
350 Ga0400488_20927
351 Ga0400488_61560
352 Ga0400486_08631
353 Ga0400486_12355
354 Ga0400486_16840
355 Ga0400486_25600
356 Ga0400486_30854
357 Ga0400483_010828
358 Ga0400483_018619
359 Ga0400483_034219
360 Ga0400483_201005
361 Ga0400489_34096
362 Ga0400489_36589
363 Ga0400489_79482
364 Ga0400487_34922
365 Ga0400487_50876
366 Ga0436365_0281057
367 Ga0436365_0407870
368 Ga0451577_0164459
369 Ga0453683_0004543
370 Ga0495662_0083480
371 Ga0495608_0008293
372 Ga0495618_0041767
373 Ga0495630_0104950
374 Ga0495663_0000068
375 Ga0495621_0001189
376 Ga0495667_0000141
377 Ga0495667_0176028
378 Ga0495668_0004187
379 Ga0495657_0004047
380 Ga0495674_0003833
381 Ga0495675_0060243
382 Ga0495684_0200052
383 Ga0496108_0022223
384 Ga0496109_0000023
385 Ga0496109_0000092
386 Ga0496112_0011792
387 Ga0496112_0219006
388 Ga0496113_0107070
389 Ga0501041_0013255
390 Ga0501042_0063959
391 Ga0501048_0036736
392 Ga0501072_0048443
393 Ga0501075_0040635
394 Ga0501076_0030175
395 Ga0501045_0054212
396 nmdc:mga05p37_216063_c1
397 nmdc:mga06r32_10840_c1
398 nmdc:mga06r32_18904_c1
399 nmdc:mga06r32_62765_c1
400 nmdc:mga06r32_92511_c1
401 nmdc:mga08y16_148594_c1
402 nmdc:mga08y16_21852_c1
403 nmdc:mga08y16_7232_c1
404 nmdc:mga0n895_5754_c1
405 nmdc:mga0n895_6304_c1
406 nmdc:mga0rr50_282224_c1
407 nmdc:mga0a205_31969_c1
408 nmdc:mga0a205_36626_c1
409 nmdc:mga0a205_425_c1
410 Ga0501084_0072220

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

140

307

0.99

PF00072

Response_reg

Response regulator receiver domain

5

115

0.97

PF02954

HTH_8

Bacterial regulatory protein, Fis family

424

465

0.96

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

141

311

0.89

PF07728

AAA_5

AAA domain (dynein-related subfamily)

163

291

0.8

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

164

301

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9729 3 120
6jdl-assembly1.cif.gz_A central domain of fleq h287a mutant in complex with atpgs and mg 0.971 139 384
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9705 3 120
6jdi-assembly1.cif.gz_A central domain of fleq h287n mutant in complex with atpgs and mg 0.9696 139 384
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9693 3 120
ID Description Score Start End Superfamily
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9886 3 82 3.40.50.2300
af_P30843_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9825 4 82 3.40.50.2300
af_P0AFB8_313_383_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9819 314 382 1.10.8.60
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9805 3 79 3.40.50.2300
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9799 3 79 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A1F9VDU4-F1-model_v4 Response regulatory domain-containing protein 0.9782 3 119 GO:0000160
GO:0003677
AF-A0A258BFB1-F1-model_v4 Hybrid sensor histidine kinase/response regulator 0.977 1 79 GO:0000160
GO:0016301
AF-A0A842TFB1-F1-model_v4 Response regulator 0.9762 3 121 GO:0000160
AF-A0A7C7QNZ9-F1-model_v4 Response regulator transcription factor 0.9743 1 115 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2W4LBZ9-F1-model_v4 Response regulatory domain-containing protein 0.9738 3 122 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map