F313145

General Info

Members Datasets Scaffolds Average Seq Length
204 164 185 405

Family's Representative Sequence

Representative Sequence 3300053177|Ga0500636_0053077|Ga0500636_0053077_665_1927
Length 420
Sequence MEKRQGPLAGIRVLEMGRLIAAPFCGQILGDLGADVIKVERVGGGDDIRGYGPPFLCDRGGPGAASSFYLTYNRNKRSIAIDFSKPEGAELVRQLAAQSDVFIENYKVGSLRKYGLDEASLRKVREDIIYLSVSGFGQTGPYATRPATDVVIQGMSGLMSVTGEGDGPPTKVGTPVADMFTGLYSTVAVLAALFERVQGKAGGAWANMSLLECGMALMAPGAVWNSLAGQVPERTGNDAHGQGSAPSSLFSCRNGTVLIQAGKDPDFVKLCRVLGRDDLAQDDRFAARTARVKNYGILRPILVDLIGQWDKNDLYSRLVDAGIICGPVNDMAEALADPQVVQSGIEMAANHPDDPSLKLIGSPIRFGMETTPIRRHPPRLGEHSEEVLREVLGFDTDRITALADAGVTQLFRDVATSPKA

Samples

Sample ID Description Type Environment
1 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
2 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
3 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
4 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
5 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
6 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
7 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
8 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
9 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
10 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
11 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
12 2902330777 Methylobacterium sp. 2A Isolate Unclassified
13 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
14 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
58 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
59 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
60 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
61 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
62 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
63 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
64 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
66 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
67 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
68 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
69 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
72 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
75 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
76 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
79 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
80 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
84 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
87 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
88 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
89 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
90 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
91 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
92 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
93 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
94 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
101 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
106 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
107 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
108 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
116 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
117 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
122 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
123 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
124 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
125 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
126 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
127 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
130 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
131 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
132 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
133 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
134 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
135 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
136 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
137 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
138 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
139 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
140 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
141 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
142 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
143 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
144 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
147 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
148 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
149 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
150 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
151 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
152 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
153 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
154 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
155 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
156 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
157 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
158 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 641522639 Methylobacterium sp. 4-46 Isolate Nodule
162 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
163 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
164 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.69
Metatranscriptomes 0
Isolates 9.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.98
Nodule 2.45
Rhizoplane 0.98
Rhizosphere 63.24
Stem 0
Stem Tuber 0
Unclassified 7.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100036316 3300005334 Bacteria 3499
2 Ga0068869_100223615 3300005334 Bacteria 1493
3 Ga0068868_100125179 3300005338 Bacteria 2099
4 Ga0070709_10020457 3300005434 Bacteria 3839
5 Ga0070700_100068978 3300005441 Bacteria 2250
6 Ga0070694_100030821 3300005444 Bacteria 3512
7 Ga0070695_100001888 3300005545 Bacteria 11844
8 Ga0070665_100160343 3300005548 Bacteria 2251
9 Ga0070664_100086224 3300005564 Bacteria 2713
10 Ga0068856_100129706 3300005614 Bacteria 2526
11 Ga0068858_100235931 3300005842 Bacteria 1734
12 Ga0068860_100142068 3300005843 Bacteria 2308
13 Ga0081539_10107305 3300005985 Bacteria 1412
14 Ga0075368_10010915 3300006042 Bacteria 3294
15 Ga0075364_10015483 3300006051 Bacteria 4731
16 Ga0075364_10057501 3300006051 Bacteria 2548
17 Ga0075362_10000020 3300006177 Bacteria 63079
18 Ga0075367_10001188 3300006178 Bacteria 10935
19 Ga0075366_10000022 3300006195 Bacteria 53834
20 Ga0075370_10000007 3300006353 Bacteria 104910
21 Ga0075370_10057448 3300006353 Bacteria 2212
22 Ga0075434_100346796 3300006871 Bacteria 1506
23 Ga0105240_10153785 3300009093 Bacteria 2738
24 Ga0105245_10093778 3300009098 Bacteria 2767
25 Ga0105245_10287538 3300009098 Bacteria 1609
26 Ga0105245_10518201 3300009098 Bacteria 1210
27 Ga0114129_10546158 3300009147 Bacteria 1507
28 Ga0105248_10017543 3300009177 Bacteria 7895
29 Ga0157370_10043757 3300013104 Bacteria 4308
30 Ga0157369_10474112 3300013105 Bacteria 1295
31 Ga0157374_10011204 3300013296 Bacteria 7753
32 Ga0157378_10001483 3300013297 Bacteria 21190
33 Ga0157375_10268621 3300013308 Bacteria 1867
34 Ga0157379_10173902 3300014968 Bacteria 1944
35 Ga0207685_10041047 3300025905 Bacteria 1729
36 Ga0207669_10227420 3300025937 Bacteria 1374
37 Ga0207704_10063312 3300025938 Bacteria 2305
38 Ga0207689_10085214 3300025942 Bacteria 2597
39 Ga0207679_10030805 3300025945 Bacteria 3750
40 Ga0207651_10082636 3300025960 Bacteria 2320
41 Ga0207677_10096603 3300026023 Bacteria 2162
42 Ga0207648_10064945 3300026089 Bacteria 3181
43 Ga0207675_100380676 3300026118 Bacteria 1388
44 Ga0209813_10025157 3300027866 Bacteria 1709
45 Ga0268264_10404582 3300028381 Bacteria 1312
46 Ga0265327_10098135 3300031251 Bacteria 1418
47 Ga0307508_10043595 3300031616 Bacteria 4019
48 Ga0373926_0020119 3300035083 Unclassified 2304
49 Ga0373940_0003308 3300035088 Bacteria 3272
50 Ga0373943_0020911 3300035170 Bacteria 3021
51 Ga0373946_0016335 3300035171 Bacteria 2827
52 Ga0373955_0107097 3300035172 Bacteria 1612
53 Ga0373942_0005494 3300035207 Bacteria 2940
54 Ga0316574_0000554 3300035398 Bacteria 15462
55 Ga0373935_0005868 3300035692 Bacteria 7275
56 Ga0373927_0002223 3300035695 Bacteria 14273
57 Ga0373927_0025799 3300035695 Bacteria 3842
58 Ga0373933_0181418 3300035724 Bacteria 1343
59 Ga0373947_0037651 3300035725 Bacteria 2871
60 Ga0373947_0085182 3300035725 Bacteria 1962
61 Ga0316584_0023532 3300036712 Bacteria 4500
62 Ga0373925_0003822 3300037068 Bacteria 11554
63 Ga0436364_0452698 3300037853 Bacteria 5944
64 Ga0400483_013560 3300039062 Bacteria 1946
65 Ga0400483_023675 3300039062 Bacteria 4235
66 Ga0400483_145453 3300039062 Bacteria 3068
67 Ga0400483_163817 3300039062 Bacteria 3727
68 Ga0466968_0000399 3300044735 Bacteria 14295
69 Ga0466968_0019888 3300044735 Bacteria 2707
70 Ga0495592_0013525 3300046454 Bacteria 6209
71 Ga0495592_0072027 3300046454 Unclassified 2515
72 Ga0495638_0013765 3300046460 Bacteria 5493
73 Ga0495651_0000580 3300046462 Bacteria 28404
74 Ga0495651_0000793 3300046462 Bacteria 24515
75 Ga0495653_0046948 3300046463 Bacteria 3342
76 Ga0495664_0051564 3300046477 Bacteria 2443
77 Ga0495583_0027014 3300046506 Bacteria 2837
78 Ga0495608_0033326 3300046511 Bacteria 3482
79 Ga0495610_0068251 3300046512 Bacteria 1667
80 Ga0495618_0011481 3300046514 Bacteria 5373
81 Ga0495618_0042810 3300046514 Unclassified 2856
82 Ga0495628_0000589 3300046516 Bacteria 33428
83 Ga0495648_0022068 3300046524 Bacteria 4393
84 Ga0495666_0050704 3300046526 Bacteria 1995
85 Ga0495652_0005017 3300046529 Bacteria 12540
86 Ga0495652_0016293 3300046529 Bacteria 6649
87 Ga0495654_0007736 3300046530 Bacteria 5981
88 Ga0495640_0053455 3300046533 Bacteria 2769
89 Ga0495640_0135719 3300046533 Bacteria 1589
90 Ga0495586_0007020 3300046535 Bacteria 6002
91 Ga0495586_0126390 3300046535 Bacteria 1430
92 Ga0495587_0000591 3300046536 Bacteria 24874
93 Ga0495587_0152304 3300046536 Bacteria 1318
94 Ga0495621_0001923 3300046539 Bacteria 5460
95 Ga0495597_0003220 3300046542 Bacteria 9707
96 Ga0495645_0031346 3300046543 Bacteria 3874
97 Ga0495645_0097088 3300046543 Bacteria 2099
98 Ga0495622_0023933 3300046557 Bacteria 2850
99 Ga0495622_0065137 3300046557 Bacteria 1685
100 Ga0495633_0066067 3300046558 Bacteria 1689
101 Ga0495667_0000907 3300046559 Bacteria 19119
102 Ga0495667_0006006 3300046559 Bacteria 8212
103 Ga0495667_0059474 3300046559 Bacteria 2508
104 Ga0495634_0140702 3300046642 Bacteria 1532
105 Ga0495625_0018382 3300046660 Bacteria 5460
106 Ga0495625_0151928 3300046660 Bacteria 1556
107 Ga0495635_0053902 3300046663 Bacteria 2770
108 Ga0495657_0006735 3300046675 Bacteria 8959
109 Ga0495657_0015475 3300046675 Bacteria 5582
110 Ga0495623_0024665 3300046679 Bacteria 3872
111 Ga0495646_0022359 3300046680 Bacteria 3989
112 Ga0495658_0057989 3300046683 Bacteria 2214
113 Ga0495669_0000457 3300046684 Bacteria 19129
114 Ga0495613_0028318 3300046689 Bacteria 4166
115 Ga0495613_0134062 3300046689 Bacteria 1773
116 Ga0495624_0002691 3300046690 Bacteria 13377
117 Ga0495671_0094727 3300046692 Bacteria 1461
118 Ga0495600_0045448 3300046809 Bacteria 2865
119 Ga0495660_0035780 3300046810 Bacteria 2772
120 Ga0495604_0000323 3300047317 Bacteria 42953
121 Ga0495604_0043150 3300047317 Bacteria 3532
122 Ga0495674_0011578 3300047319 Bacteria 8322
123 Ga0495674_0028659 3300047319 Bacteria 5073
124 Ga0495676_0142961 3300047321 Bacteria 1713
125 Ga0495680_0000568 3300047322 Bacteria 41591
126 Ga0495680_0023787 3300047322 Bacteria 5091
127 Ga0495680_0037321 3300047322 Bacteria 3892
128 Ga0495675_0000596 3300047444 Bacteria 23294
129 Ga0495675_0025664 3300047444 Bacteria 3755
130 Ga0495684_0000691 3300047471 Bacteria 27167
131 Ga0495684_0001043 3300047471 Bacteria 22412
132 Ga0495593_0035605 3300047673 Bacteria 2702
133 Ga0495602_0057930 3300048088 Bacteria 3395
134 Ga0495615_0002904 3300048090 Bacteria 2810
135 Ga0496102_0103579 3300048905 Bacteria 2647
136 Ga0496112_0356026 3300048915 Bacteria 1406
137 Ga0501083_0019764 3300049744 Bacteria 4688
138 nmdc:mga03683_8_c1 3300050489 Bacteria 138266
139 nmdc:mga00v17_53104_c1 3300050491 Bacteria 2469
140 nmdc:mga00v17_5710_c1 3300050491 Bacteria 6575
141 nmdc:mga0yw44_33575_c1 3300050492 Bacteria 2999
142 nmdc:mga0k408_37_c1 3300050493 Bacteria 72118
143 nmdc:mga06z11_154822_c1 3300050494 Bacteria 1306
144 nmdc:mga06z11_3217_c1 3300050494 Bacteria 6308
145 nmdc:mga04h51_16980_c1 3300050495 Bacteria 2121
146 nmdc:mga07m45_2_c1 3300050496 Bacteria 451154
147 nmdc:mga07m45_743_c2 3300050496 Bacteria 7632
148 nmdc:mga0n895_535828_c1 3300050512 Bacteria 1177
149 nmdc:mga0sz30_2723_c1 3300050516 Bacteria 6306
150 Ga0495612_0023875 3300053078 Bacteria 2455
151 Ga0500643_001695 3300053087 Bacteria 12252
152 Ga0500647_0010725 3300053091 Bacteria 4064
153 Ga0500651_0008496 3300053093 Bacteria 6047
154 Ga0500566_0042755 3300053094 Bacteria 2613
155 Ga0500641_0014989 3300053096 Bacteria 2868
156 Ga0500555_035894 3300053103 Bacteria 1391
157 Ga0500562_000734 3300053108 Bacteria 7949
158 Ga0500595_046618 3300053119 Bacteria 1362
159 Ga0500607_000038 3300053121 Bacteria 85812
160 Ga0500614_000562 3300053123 Bacteria 9568
161 Ga0500642_0000278 3300053130 Bacteria 19182
162 Ga0500655_002604 3300053133 Bacteria 3272
163 Ga0500559_0102210 3300053136 Bacteria 1321
164 Ga0500564_000266 3300053138 Bacteria 14564
165 Ga0500573_0124785 3300053140 Bacteria 1430
166 Ga0500577_0006835 3300053142 Bacteria 3168
167 Ga0500590_000941 3300053148 Bacteria 11154
168 Ga0500590_001035 3300053148 Bacteria 10843
169 Ga0500622_0003805 3300053156 Bacteria 9827
170 Ga0500622_0003940 3300053156 Bacteria 9591
171 Ga0500624_000069 3300053157 Bacteria 60896
172 Ga0500624_000301 3300053157 Bacteria 16959
173 Ga0500639_002154 3300053163 Bacteria 9849
174 Ga0500636_0010052 3300053177 Bacteria 5509
175 Ga0500636_0053077 3300053177 Bacteria 2379
176 Ga0500637_0000374 3300053178 Bacteria 16931
177 Ga0500637_0081991 3300053178 Bacteria 1863
178 Ga0500567_000346 3300053723 Bacteria 15145
179 Ga0500570_000059 3300053724 Bacteria 27832
180 Ga0500611_001556 3300053727 Bacteria 2559
181 Ga0500625_000003 3300053729 Bacteria 268493
182 Ga0500645_000764 3300053730 Bacteria 19631
183 Ga0500552_005015 3300053733 Bacteria 1423
184 Ga0501084_0131277 3300054114 Bacteria 2108
185 Ga0501082_0019134 3300060353 Bacteria 5900

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035083 Ga0373926_0020119 Ga0373926_0020119_1248_2288 337
2 3300037853 Ga0436364_0452698 Ga0436364_0452698_4889_5926 338
3 3300050512 nmdc:mga0n895_535828_c1 nmdc:mga0n895_535828_c1_128_1147 339
4 3300046557 Ga0495622_0065137 Ga0495622_0065137_558_1631 348
5 3300046543 Ga0495645_0031346 Ga0495645_0031346_1383_2462 350
6 3300046511 Ga0495608_0033326 Ga0495608_0033326_2336_3421 352
7 3300046514 Ga0495618_0042810 Ga0495618_0042810_25_1110 352
8 3300035724 Ga0373933_0181418 Ga0373933_0181418_137_1294 357
9 3300009098 Ga0105245_10518201 Ga0105245_105182011 375
10 3300046809 Ga0495600_0045448 Ga0495600_0045448_1651_2808 376
11 3300009098 Ga0105245_10093778 Ga0105245_100937782 378
12 3300046679 Ga0495623_0024665 Ga0495623_0024665_2049_3299 379
13 3300026118 Ga0207675_100380676 Ga0207675_1003806761 381
14 3300039062 Ga0400483_013560 Ga0400483_013560_559_1710 382
15 3300006051 Ga0075364_10057501 Ga0075364_100575013 384
16 3300006177 Ga0075362_10000020 Ga0075362_100000208 384
17 3300050489 nmdc:mga03683_8_c1 nmdc:mga03683_8_c1_83602_84828 384
18 3300050491 nmdc:mga00v17_53104_c1 nmdc:mga00v17_53104_c1_727_1953 384
19 3300050516 nmdc:mga0sz30_2723_c1 nmdc:mga0sz30_2723_c1_2655_3881 384
20 3300053119 Ga0500595_046618 Ga0500595_046618_16_1194 384
21 3300039062 Ga0400483_163817 Ga0400483_163817_538_1707 385
22 3300046557 Ga0495622_0023933 Ga0495622_0023933_1276_2478 385
23 3300050496 nmdc:mga07m45_743_c2 nmdc:mga07m45_743_c2_16_1260 386
24 3300053087 Ga0500643_001695 Ga0500643_001695_1051_2235 386
25 3300053157 Ga0500624_000069 Ga0500624_000069_4779_5963 386
26 3300053177 Ga0500636_0010052 Ga0500636_0010052_2373_3557 386
27 3300013104 Ga0157370_10043757 Ga0157370_100437572 389
28 3300013105 Ga0157369_10474112 Ga0157369_104741121 389
29 3300049744 Ga0501083_0019764 Ga0501083_0019764_1992_3215 390
30 3300035398 Ga0316574_0000554 Ga0316574_0000554_10580_11773 391
31 3300036712 Ga0316584_0023532 Ga0316584_0023532_2092_3285 391
32 3300039062 Ga0400483_145453 Ga0400483_145453_512_1711 391
33 3300044735 Ga0466968_0000399 Ga0466968_0000399_6560_7741 391
34 3300009147 Ga0114129_10546158 Ga0114129_105461581 392
35 3300050494 nmdc:mga06z11_154822_c1 nmdc:mga06z11_154822_c1_91_1296 392
36 3300053148 Ga0500590_000941 Ga0500590_000941_97_1320 395
37 iso_pu_bacteria 2513237351 2514592392 395
38 3300006195 Ga0075366_10000022 Ga0075366_1000002242 396
39 3300006353 Ga0075370_10000007 Ga0075370_1000000745 396
40 3300006353 Ga0075370_10057448 Ga0075370_100574482 396
41 3300031251 Ga0265327_10098135 Ga0265327_100981351 396
42 3300050493 nmdc:mga0k408_37_c1 nmdc:mga0k408_37_c1_18965_20191 396
43 3300050496 nmdc:mga07m45_2_c1 nmdc:mga07m45_2_c1_363854_365080 396
44 3300053103 Ga0500555_035894 Ga0500555_035894_18_1244 396
45 3300053121 Ga0500607_000038 Ga0500607_000038_20564_21790 396
46 3300053136 Ga0500559_0102210 Ga0500559_0102210_32_1258 396
47 3300053178 Ga0500637_0081991 Ga0500637_0081991_565_1791 396
48 3300053730 Ga0500645_000764 Ga0500645_000764_4628_5854 396
49 iso_pu_bacteria 2842333319 2842334283 396
50 3300031616 Ga0307508_10043595 Ga0307508_100435953 397
51 3300035088 Ga0373940_0003308 Ga0373940_0003308_1005_2255 397
52 3300035170 Ga0373943_0020911 Ga0373943_0020911_426_1655 397
53 3300035171 Ga0373946_0016335 Ga0373946_0016335_71_1300 397
54 3300035207 Ga0373942_0005494 Ga0373942_0005494_245_1495 397
55 3300035695 Ga0373927_0002223 Ga0373927_0002223_4028_5257 397
56 3300035725 Ga0373947_0037651 Ga0373947_0037651_1501_2730 397
57 3300037068 Ga0373925_0003822 Ga0373925_0003822_3016_4245 397
58 3300046460 Ga0495638_0013765 Ga0495638_0013765_1975_3204 397
59 3300046506 Ga0495583_0027014 Ga0495583_0027014_1026_2255 397
60 3300046512 Ga0495610_0068251 Ga0495610_0068251_121_1356 397
61 3300046524 Ga0495648_0022068 Ga0495648_0022068_918_2147 397
62 3300046530 Ga0495654_0007736 Ga0495654_0007736_1970_3199 397
63 3300046539 Ga0495621_0001923 Ga0495621_0001923_4204_5433 397
64 3300046542 Ga0495597_0003220 Ga0495597_0003220_6185_7414 397
65 3300046558 Ga0495633_0066067 Ga0495633_0066067_329_1558 397
66 3300046660 Ga0495625_0018382 Ga0495625_0018382_3708_4952 397
67 3300046683 Ga0495658_0057989 Ga0495658_0057989_848_2077 397
68 3300046684 Ga0495669_0000457 Ga0495669_0000457_2761_3990 397
69 3300046692 Ga0495671_0094727 Ga0495671_0094727_201_1430 397
70 3300046810 Ga0495660_0035780 Ga0495660_0035780_170_1399 397
71 3300048090 Ga0495615_0002904 Ga0495615_0002904_940_2169 397
72 3300053091 Ga0500647_0010725 Ga0500647_0010725_2192_3421 397
73 3300053093 Ga0500651_0008496 Ga0500651_0008496_2757_3986 397
74 3300053094 Ga0500566_0042755 Ga0500566_0042755_1309_2538 397
75 3300053096 Ga0500641_0014989 Ga0500641_0014989_75_1304 397
76 3300053108 Ga0500562_000734 Ga0500562_000734_4065_5294 397
77 3300053123 Ga0500614_000562 Ga0500614_000562_2758_3987 397
78 3300053130 Ga0500642_0000278 Ga0500642_0000278_15181_16410 397
79 3300053133 Ga0500655_002604 Ga0500655_002604_76_1305 397
80 3300053138 Ga0500564_000266 Ga0500564_000266_5256_6485 397
81 3300053140 Ga0500573_0124785 Ga0500573_0124785_116_1345 397
82 3300053142 Ga0500577_0006835 Ga0500577_0006835_1052_2281 397
83 3300053148 Ga0500590_001035 Ga0500590_001035_6906_8135 397
84 3300053156 Ga0500622_0003805 Ga0500622_0003805_1133_2377 397
85 3300053156 Ga0500622_0003940 Ga0500622_0003940_8229_9458 397
86 3300053157 Ga0500624_000301 Ga0500624_000301_6033_7289 397
87 3300053163 Ga0500639_002154 Ga0500639_002154_8437_9666 397
88 3300053177 Ga0500636_0053077 Ga0500636_0053077_665_1927 397
89 3300053178 Ga0500637_0000374 Ga0500637_0000374_6005_7261 397
90 3300053723 Ga0500567_000346 Ga0500567_000346_7995_9224 397
91 3300053724 Ga0500570_000059 Ga0500570_000059_24007_25236 397
92 3300053729 Ga0500625_000003 Ga0500625_000003_207864_209093 397
93 3300053733 Ga0500552_005015 Ga0500552_005015_97_1326 397
94 iso_pu_bacteria 2545555834 2545674707 397
95 iso_pu_bacteria 2582581305 2585261985 397
96 iso_pu_bacteria 2582581305 2585263678 397
97 iso_pu_bacteria 2595698237 2596373358 397
98 iso_pu_bacteria 2739367664 2739651464 397
99 iso_pu_bacteria 2739367865 2740029937 397
100 iso_pu_bacteria 2837678835 2837681826 397
101 iso_pu_bacteria 2889306138 2889307794 397
102 iso_pu_bacteria 2902330777 2902336673 397
103 iso_pu_bacteria 2902405164 2902406941 397
104 iso_pu_bacteria 2928125067 2928127118 397
105 iso_pu_bacteria 641522639 641643596 397
106 iso_pu_bacteria 8045864390 8045864701 397
107 3300005334 Ga0068869_100036316 Ga0068869_1000363165 398
108 3300005334 Ga0068869_100223615 Ga0068869_1002236151 398
109 3300005338 Ga0068868_100125179 Ga0068868_1001251792 398
110 3300005434 Ga0070709_10020457 Ga0070709_100204574 398
111 3300005441 Ga0070700_100068978 Ga0070700_1000689781 398
112 3300005444 Ga0070694_100030821 Ga0070694_1000308211 398
113 3300005545 Ga0070695_100001888 Ga0070695_1000018887 398
114 3300005548 Ga0070665_100160343 Ga0070665_1001603432 398
115 3300005564 Ga0070664_100086224 Ga0070664_1000862243 398
116 3300005614 Ga0068856_100129706 Ga0068856_1001297062 398
117 3300005842 Ga0068858_100235931 Ga0068858_1002359312 398
118 3300005843 Ga0068860_100142068 Ga0068860_1001420682 398
119 3300005985 Ga0081539_10107305 Ga0081539_101073052 398
120 3300006042 Ga0075368_10010915 Ga0075368_100109153 398
121 3300006051 Ga0075364_10015483 Ga0075364_100154834 398
122 3300006178 Ga0075367_10001188 Ga0075367_100011885 398
123 3300006871 Ga0075434_100346796 Ga0075434_1003467961 398
124 3300009093 Ga0105240_10153785 Ga0105240_101537852 398
125 3300009098 Ga0105245_10287538 Ga0105245_102875382 398
126 3300009177 Ga0105248_10017543 Ga0105248_1001754312 398
127 3300013296 Ga0157374_10011204 Ga0157374_100112042 398
128 3300013297 Ga0157378_10001483 Ga0157378_1000148315 398
129 3300013308 Ga0157375_10268621 Ga0157375_102686212 398
130 3300014968 Ga0157379_10173902 Ga0157379_101739022 398
131 3300025905 Ga0207685_10041047 Ga0207685_100410472 398
132 3300025937 Ga0207669_10227420 Ga0207669_102274201 398
133 3300025938 Ga0207704_10063312 Ga0207704_100633122 398
134 3300025942 Ga0207689_10085214 Ga0207689_100852142 398
135 3300025945 Ga0207679_10030805 Ga0207679_100308052 398
136 3300025960 Ga0207651_10082636 Ga0207651_100826363 398
137 3300026023 Ga0207677_10096603 Ga0207677_100966032 398
138 3300026089 Ga0207648_10064945 Ga0207648_100649454 398
139 3300027866 Ga0209813_10025157 Ga0209813_100251572 398
140 3300028381 Ga0268264_10404582 Ga0268264_104045821 398
141 3300035172 Ga0373955_0107097 Ga0373955_0107097_226_1476 398
142 3300035692 Ga0373935_0005868 Ga0373935_0005868_5358_6608 398
143 3300035695 Ga0373927_0025799 Ga0373927_0025799_1762_3012 398
144 3300035725 Ga0373947_0085182 Ga0373947_0085182_575_1825 398
145 3300039062 Ga0400483_023675 Ga0400483_023675_479_1693 398
146 3300044735 Ga0466968_0019888 Ga0466968_0019888_671_1918 398
147 3300046454 Ga0495592_0013525 Ga0495592_0013525_4194_5444 398
148 3300046454 Ga0495592_0072027 Ga0495592_0072027_721_1971 398
149 3300046462 Ga0495651_0000580 Ga0495651_0000580_9630_10880 398
150 3300046462 Ga0495651_0000793 Ga0495651_0000793_20290_21540 398
151 3300046463 Ga0495653_0046948 Ga0495653_0046948_304_1554 398
152 3300046477 Ga0495664_0051564 Ga0495664_0051564_68_1318 398
153 3300046514 Ga0495618_0011481 Ga0495618_0011481_1893_3143 398
154 3300046516 Ga0495628_0000589 Ga0495628_0000589_19615_20865 398
155 3300046526 Ga0495666_0050704 Ga0495666_0050704_710_1960 398
156 3300046529 Ga0495652_0005017 Ga0495652_0005017_662_1912 398
157 3300046529 Ga0495652_0016293 Ga0495652_0016293_5179_6429 398
158 3300046533 Ga0495640_0053455 Ga0495640_0053455_1492_2742 398
159 3300046533 Ga0495640_0135719 Ga0495640_0135719_169_1419 398
160 3300046535 Ga0495586_0007020 Ga0495586_0007020_2493_3743 398
161 3300046535 Ga0495586_0126390 Ga0495586_0126390_60_1310 398
162 3300046536 Ga0495587_0000591 Ga0495587_0000591_1094_2344 398
163 3300046536 Ga0495587_0152304 Ga0495587_0152304_43_1293 398
164 3300046543 Ga0495645_0097088 Ga0495645_0097088_333_1583 398
165 3300046559 Ga0495667_0000907 Ga0495667_0000907_9711_10961 398
166 3300046559 Ga0495667_0006006 Ga0495667_0006006_6740_7990 398
167 3300046559 Ga0495667_0059474 Ga0495667_0059474_468_1718 398
168 3300046642 Ga0495634_0140702 Ga0495634_0140702_87_1337 398
169 3300046660 Ga0495625_0151928 Ga0495625_0151928_99_1310 398
170 3300046663 Ga0495635_0053902 Ga0495635_0053902_564_1814 398
171 3300046675 Ga0495657_0006735 Ga0495657_0006735_696_1946 398
172 3300046675 Ga0495657_0015475 Ga0495657_0015475_3498_4748 398
173 3300046680 Ga0495646_0022359 Ga0495646_0022359_858_2108 398
174 3300046689 Ga0495613_0028318 Ga0495613_0028318_614_1864 398
175 3300046689 Ga0495613_0134062 Ga0495613_0134062_378_1628 398
176 3300046690 Ga0495624_0002691 Ga0495624_0002691_2216_3466 398
177 3300047317 Ga0495604_0000323 Ga0495604_0000323_17453_18703 398
178 3300047317 Ga0495604_0043150 Ga0495604_0043150_1793_3043 398
179 3300047319 Ga0495674_0011578 Ga0495674_0011578_4112_5362 398
180 3300047319 Ga0495674_0028659 Ga0495674_0028659_125_1375 398
181 3300047321 Ga0495676_0142961 Ga0495676_0142961_26_1276 398
182 3300047322 Ga0495680_0000568 Ga0495680_0000568_20473_21723 398
183 3300047322 Ga0495680_0023787 Ga0495680_0023787_3809_5059 398
184 3300047322 Ga0495680_0037321 Ga0495680_0037321_1161_2411 398
185 3300047444 Ga0495675_0000596 Ga0495675_0000596_839_2089 398
186 3300047444 Ga0495675_0025664 Ga0495675_0025664_376_1626 398
187 3300047471 Ga0495684_0000691 Ga0495684_0000691_12149_13399 398
188 3300047471 Ga0495684_0001043 Ga0495684_0001043_8756_10006 398
189 3300047673 Ga0495593_0035605 Ga0495593_0035605_843_2093 398
190 3300048088 Ga0495602_0057930 Ga0495602_0057930_838_2088 398
191 3300048905 Ga0496102_0103579 Ga0496102_0103579_824_2020 398
192 3300048915 Ga0496112_0356026 Ga0496112_0356026_43_1278 398
193 3300050491 nmdc:mga00v17_5710_c1 nmdc:mga00v17_5710_c1_4324_5565 398
194 3300050492 nmdc:mga0yw44_33575_c1 nmdc:mga0yw44_33575_c1_1001_2242 398
195 3300050494 nmdc:mga06z11_3217_c1 nmdc:mga06z11_3217_c1_1944_3185 398
196 3300050495 nmdc:mga04h51_16980_c1 nmdc:mga04h51_16980_c1_123_1364 398
197 3300053078 Ga0495612_0023875 Ga0495612_0023875_711_1961 398
198 3300053727 Ga0500611_001556 Ga0500611_001556_1265_2476 398
199 3300054114 Ga0501084_0131277 Ga0501084_0131277_31_1263 398
200 3300060353 Ga0501082_0019134 Ga0501082_0019134_3544_4767 398
201 iso_pu_bacteria 2829745981 2829749884 398
202 iso_pu_bacteria 2861691609 2861692675 398
203 iso_pu_bacteria 643348564 643600480 398
204 iso_pu_bacteria 8054563764 8054568316 398

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

8

384

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.933 1 381
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.9306 1 381
5yit-assembly2.cif.gz_D crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9178 1 374
1p5r-assembly1.cif.gz_A formyl-coa transferase in complex with coenzyme a 0.9168 1 394
5yit-assembly1.cif.gz_A crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9161 1 373
ID Description Score Start End Superfamily
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9841 226 317 3.30.1540.10
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9782 226 317 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9737 226 317 3.30.1540.10
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9711 228 314 3.30.1540.10
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9679 226 317 3.30.1540.10
ID Description Score Start End GO Terms
AF-A0A3M1RQL6-F1-model_v4 CoA transferase 0.9726 2 147 GO:0008410
AF-A0A1H8LT68-F1-model_v4 Crotonobetainyl-CoA:carnitine CoA-transferase CaiB 0.9725 2 398 GO:0008410
AF-A0A0R3CBW1-F1-model_v4 CoA-transferase 0.9715 5 398 GO:0008410
AF-A0A2H1JPH7-F1-model_v4 CoA-transferase family III 0.9704 1 118 GO:0008410
AF-A0A535F547-F1-model_v4 CoA transferase 0.9695 1 397 GO:0008410

Feature Viewer

pLDDT pTM Quality
92.76 0.91 High
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Predicted Structure (AlphaFold2)

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