F313035

General Info

Members Datasets Scaffolds Average Seq Length
204 144 408 379

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0006632|Ga0501031_0006632_5343_6653
Length 426
Sequence MTRGRAHQGVLLCSESRQSSEIREDALSTVGLTSSAAVPSPPLVIQRSVMPYPATHSDLVDAPVLEESRASIPSLPDSSTAVVYCEGQFGEQDGKTANGLIRHSEKYEILSVIDSTQAGVDTGRLLGCAPNGIPVVASLREAIAQAGCVPDYLICGVAPADGMLSPSQRVVLLDGISNGMHIVNGLHEFLNDDDEFATASLVAGVTITDVRRPRSTKDLNLFSGRIFGVTCPRIAVLGTDGSVGKRTTTTLLVEALNQAGIHAVMVGTGQTSLIQGGRYGVALDAIIPQFCSGEVEAQVVAAFEGENPDVIVVEGQGALSHPAYMSSAQILRGSRPAAVIVQHAPRRTVLGDFPMIDVPTVSSEIAMIEAFADTRVIGVTMNHELMNDDEETGLPATDPLTRPLDRLVEMVQGAFPELAMRVRSTA

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
31 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
46 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
47 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
50 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
51 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
52 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
53 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
54 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
55 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
56 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
57 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
58 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
59 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
60 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
61 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
62 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
63 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
64 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
65 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
66 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
67 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
68 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
69 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
70 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
71 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
72 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
73 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
74 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
78 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
79 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
80 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
81 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
82 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
99 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
105 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
106 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
107 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
110 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
111 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
112 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
114 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
115 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
116 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
117 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
118 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
119 2643221575 Microbacterium sp. Root61 Isolate Unclassified
120 2643221576 Nocardioides sp. Root614 Isolate Unclassified
121 2643221590 Nocardioides sp. Root682 Isolate Unclassified
122 2643221616 Leifsonia sp. Root227 Isolate Unclassified
123 2643221630 Microbacterium sp. Root322 Isolate Unclassified
124 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
125 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
126 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
127 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
128 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
129 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
130 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
131 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
132 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
133 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
134 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
135 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
136 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
137 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
138 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
139 2928153084 Leifsonia sp. 563 Isolate Unclassified
140 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
141 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
142 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
143 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
144 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.29
Metatranscriptomes 1.47
Isolates 13.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.73
Nodule 0
Rhizoplane 3.43
Rhizosphere 59.31
Stem 0
Stem Tuber 0
Unclassified 0.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0006632 3300049568 Bacteria 7554
2 LJQas_1002493 3300000549 Bacteria 2548
3 JGI24740J21852_10032229 3300001979 Bacteria 1678
4 JGI24740J21852_10039227 3300001979 Bacteria 1447
5 JGI24739J22299_10032866 3300001989 Bacteria 1781
6 JGI24737J22298_10008999 3300001990 Bacteria 3331
7 JGI24735J21928_10000284 3300002067 Bacteria 17664
8 Ga0006562J51391_1042749 3300003578 Bacteria 5694
9 Ga0006562J51391_1042752 3300003578 Bacteria 5714
10 Ga0070668_100140603 3300005347 Bacteria 1945
11 Ga0070671_100004228 3300005355 Bacteria 11361
12 Ga0068867_100122714 3300005459 Bacteria 2010
13 Ga0070685_10072626 3300005466 Bacteria 2043
14 Ga0070672_100122261 3300005543 Bacteria 2132
15 Ga0070665_100001091 3300005548 Bacteria 33648
16 Ga0070665_100003260 3300005548 Bacteria 17412
17 Ga0070702_100095801 3300005615 Bacteria 1810
18 Ga0068860_100014160 3300005843 Bacteria 7823
19 Ga0075365_10016814 3300006038 Bacteria 4461
20 Ga0075365_10032755 3300006038 Bacteria 3344
21 Ga0075368_10019865 3300006042 Bacteria 2539
22 Ga0075363_100105074 3300006048 Bacteria 1566
23 Ga0075364_10013180 3300006051 Bacteria 5075
24 Ga0075364_10051904 3300006051 Bacteria 2679
25 Ga0075364_10067779 3300006051 Bacteria 2346
26 Ga0075364_10129129 3300006051 Bacteria 1696
27 Ga0075367_10000964 3300006178 Bacteria 11746
28 Ga0075367_10047087 3300006178 Bacteria 2536
29 Ga0075428_100126965 3300006844 Bacteria 2775
30 Ga0075431_100096770 3300006847 Bacteria 3047
31 Ga0075429_100069896 3300006880 Bacteria 3057
32 Ga0105247_10179516 3300009101 Bacteria 1412
33 Ga0114129_10077764 3300009147 Bacteria 4615
34 Ga0157369_10247586 3300013105 Bacteria 1861
35 Ga0157375_10034073 3300013308 Bacteria 4847
36 Ga0163163_10040582 3300014325 Bacteria 4545
37 Ga0157380_10269682 3300014326 Bacteria 1551
38 Ga0163161_10063042 3300017792 Bacteria 2701
39 Ga0224712_10011625 3300022467 Bacteria 2738
40 Ga0207644_10016221 3300025931 Bacteria 5012
41 Ga0207704_10148781 3300025938 Bacteria 1649
42 Ga0207712_10218236 3300025961 Bacteria 1523
43 Ga0207668_10030394 3300025972 Bacteria 3550
44 Ga0207668_10156912 3300025972 Bacteria 1769
45 Ga0207678_10223763 3300026067 Bacteria 1611
46 Ga0207641_10216488 3300026088 Bacteria 1774
47 Ga0207648_10064636 3300026089 Bacteria 3189
48 Ga0207675_100239533 3300026118 Bacteria 1753
49 Ga0207683_10074200 3300026121 Bacteria 3009
50 Ga0209813_10042658 3300027866 Bacteria 1387
51 Ga0268266_10002426 3300028379 Bacteria 20068
52 Ga0268264_10010464 3300028381 Bacteria 7668
53 Ga0265338_10180782 3300028800 Bacteria 1608
54 Ga0265327_10000118 3300031251 Bacteria 172792
55 Ga0265327_10003713 3300031251 Bacteria 14223
56 Ga0307410_10203186 3300031852 Bacteria 1514
57 Ga0307406_10009576 3300031901 Bacteria 5442
58 Ga0307406_10099850 3300031901 Bacteria 1974
59 Ga0395898_0174308 3300037466 Bacteria 2056
60 Ga0400485_06573 3300038735 Bacteria 11708
61 Ga0400485_16121 3300038735 Bacteria 1930
62 Ga0400486_07550 3300038742 Bacteria 2778
63 Ga0400483_024763 3300039062 Bacteria 6295
64 Ga0400483_042783 3300039062 Bacteria 47189
65 Ga0400483_085293 3300039062 Bacteria 8894
66 Ga0400483_125287 3300039062 Bacteria 2822
67 Ga0400483_207965 3300039062 Bacteria 5844
68 Ga0400483_224325 3300039062 Bacteria 6423
69 Ga0400483_266267 3300039062 Bacteria 25407
70 Ga0400483_276324 3300039062 Bacteria 5938
71 Ga0400489_17547 3300039093 Bacteria 2420
72 Ga0400489_40511 3300039093 Unclassified 2873
73 Ga0400487_16496 3300039110 Unclassified 2681
74 Ga0439466_0004155 3300041411 Bacteria 5590
75 Ga0451791_0811100 3300041451 Bacteria 1714
76 Ga0451833_0641702 3300041491 Bacteria 13990
77 Ga0439431_0002798 3300041997 Bacteria 3843
78 Ga0439434_0032147 3300042435 Bacteria 1596
79 Ga0495627_002939 3300046453 Bacteria 7825
80 Ga0495651_0013298 3300046462 Bacteria 6366
81 Ga0495653_0140014 3300046463 Bacteria 1703
82 Ga0495608_0009582 3300046511 Bacteria 6761
83 Ga0495587_0022802 3300046536 Bacteria 3852
84 Ga0495645_0033376 3300046543 Bacteria 3755
85 Ga0495656_0107895 3300046615 Bacteria 1298
86 Ga0495657_0010383 3300046675 Bacteria 7010
87 Ga0495623_0149365 3300046679 Bacteria 1382
88 Ga0495658_0037276 3300046683 Bacteria 2687
89 Ga0495604_0016380 3300047317 Bacteria 5926
90 Ga0495672_0006388 3300047320 Bacteria 9151
91 Ga0495672_0081003 3300047320 Bacteria 1809
92 Ga0495680_0216214 3300047322 Bacteria 1370
93 Ga0495675_0051456 3300047444 Bacteria 2616
94 Ga0495602_0059409 3300048088 Bacteria 3338
95 Ga0496105_0082884 3300048908 Bacteria 2649
96 Ga0496105_0239825 3300048908 Bacteria 1472
97 Ga0496108_0015827 3300048911 Bacteria 6148
98 Ga0496109_0068858 3300048912 Bacteria 3244
99 Ga0496109_0211281 3300048912 Bacteria 1825
100 Ga0496109_0321135 3300048912 Bacteria 1461
101 Ga0496116_0096854 3300048919 Bacteria 1776
102 Ga0496117_0008965 3300048920 Bacteria 9416
103 Ga0496117_0032167 3300048920 Bacteria 3990
104 Ga0496117_0042133 3300048920 Bacteria 3335
105 Ga0496118_0100369 3300048921 Bacteria 1958
106 Ga0496122_0021729 3300048925 Bacteria 5730
107 Ga0496124_0133774 3300048927 Bacteria 1966
108 Ga0496125_0000640 3300048928 Bacteria 58381
109 Ga0496125_0011812 3300048928 Bacteria 8703
110 Ga0496125_0064539 3300048928 Bacteria 2909
111 Ga0496126_0002922 3300048929 Bacteria 22208
112 Ga0496126_0008994 3300048929 Bacteria 10688
113 Ga0496126_0158668 3300048929 Bacteria 1934
114 Ga0501031_0004974 3300049568 Bacteria 8645
115 Ga0501032_0011120 3300049569 Bacteria 6469
116 Ga0501032_0013736 3300049569 Bacteria 5747
117 Ga0501033_0049185 3300049570 Bacteria 3130
118 Ga0501033_0060111 3300049570 Bacteria 2804
119 Ga0501034_0006121 3300049571 Bacteria 12981
120 Ga0501034_0028852 3300049571 Bacteria 5644
121 Ga0501034_0150233 3300049571 Bacteria 2305
122 Ga0501036_0012184 3300049572 Bacteria 7122
123 Ga0501036_0025079 3300049572 Bacteria 5028
124 Ga0501037_0011324 3300049573 Bacteria 6564
125 Ga0501037_0097466 3300049573 Bacteria 2124
126 Ga0501038_0040690 3300049574 Bacteria 4056
127 Ga0501038_0047371 3300049574 Bacteria 3723
128 Ga0501039_0005716 3300049575 Bacteria 9421
129 Ga0501039_0103493 3300049575 Bacteria 2222
130 Ga0501042_0018418 3300049578 Bacteria 4833
131 Ga0501043_0005122 3300049579 Bacteria 10607
132 Ga0501043_0013635 3300049579 Bacteria 6359
133 Ga0501043_0161436 3300049579 Bacteria 1751
134 Ga0501046_0006195 3300049580 Bacteria 10621
135 Ga0501046_0095289 3300049580 Bacteria 2287
136 Ga0501047_0017634 3300049581 Bacteria 6840
137 Ga0501047_0069014 3300049581 Bacteria 3404
138 Ga0501048_0005584 3300049582 Bacteria 9568
139 Ga0501048_0005889 3300049582 Bacteria 9330
140 Ga0501068_0013845 3300049584 Bacteria 4597
141 Ga0501070_0017130 3300049586 Bacteria 6081
142 Ga0501070_0017138 3300049586 Bacteria 6080
143 Ga0501073_0018548 3300049589 Bacteria 5031
144 Ga0501073_0122097 3300049589 Bacteria 1805
145 Ga0501074_0036936 3300049590 Bacteria 3540
146 Ga0501080_0303248 3300049742 Bacteria 1448
147 Ga0501080_0308949 3300049742 Bacteria 1433
148 Ga0501035_0020482 3300049822 Bacteria 6074
149 Ga0501035_0031283 3300049822 Bacteria 4846
150 Ga0501035_0041619 3300049822 Bacteria 4148
151 Ga0501035_0065908 3300049822 Bacteria 3214
152 Ga0501044_0000966 3300049823 Bacteria 34622
153 Ga0501044_0027105 3300049823 Bacteria 6060
154 Ga0501044_0059271 3300049823 Bacteria 3922
155 Ga0501045_0013487 3300049824 Bacteria 5772
156 nmdc:mga00v17_14022_c1 3300050491 Bacteria 4465
157 nmdc:mga00v17_160218_c1 3300050491 Bacteria 1448
158 nmdc:mga00v17_43988_c1 3300050491 Bacteria 2691
159 nmdc:mga00v17_72707_c1 3300050491 Bacteria 2134
160 nmdc:mga0yw44_22654_c1 3300050492 Bacteria 2662
161 nmdc:mga0yw44_85512_c1 3300050492 Bacteria 1985
162 nmdc:mga06z11_77270_c1 3300050494 Bacteria 1777
163 nmdc:mga06z11_98938_c1 3300050494 Bacteria 1597
164 nmdc:mga04h51_33594_c1 3300050495 Bacteria 1634
165 nmdc:mga05p37_72281_c1 3300050507 Bacteria 4244
166 nmdc:mga09592_64993_c1 3300050508 Bacteria 3089
167 nmdc:mga06r32_232204_c1 3300050510 Bacteria 1833
168 Ga0500635_0000192 3300053080 Bacteria 31343
169 Ga0500635_0003283 3300053080 Bacteria 4059
170 Ga0500635_0028701 3300053080 Bacteria 1779
171 Ga0495595_0002295 3300053084 Bacteria 7452
172 Ga0495619_0037406 3300053085 Bacteria 3162
173 Ga0500566_0000485 3300053094 Bacteria 22158
174 Ga0500568_0000510 3300053139 Bacteria 28648
175 Ga0500604_0022294 3300053151 Bacteria 1796
176 Ga0500616_0000090 3300053153 Bacteria 187734
177 Ga0500616_0008751 3300053153 Bacteria 6239
178 2643733627 2643221542 Bacteria 3563959
179 2643887381 2643221575 Bacteria 4022601
180 2643890438 2643221576 Bacteria 5214352
181 2643959494 2643221590 Bacteria 5214697
182 2644095244 2643221616 Bacteria 4066575
183 2644170202 2643221630 Bacteria 3601215
184 2644183386 2643221632 Bacteria 3406696
185 2644503081 2643221690 Bacteria 4654705
186 2644636600 2643221715 Bacteria 6671032
187 2738667769 2738541264 Bacteria 5935393
188 2738840807 2738541299 Bacteria 4020721
189 2739146839 2738541356 Bacteria 5935017
190 2844843588 2844841374 Bacteria 3917147
191 2852647316 2852646457 Bacteria 3408613
192 2852665296 2852663356 Bacteria 4090475
193 2857723842 2857723135 Bacteria 4217853
194 2868095459 2868088558 Bacteria 7609351
195 2870784704 2870782633 Bacteria 9624083
196 2902814561 2902810491 Bacteria 6794147
197 2906802573 2906799679 Bacteria 4031749
198 2919055581 2919055335 Bacteria 3875751
199 2928153722 2928153084 Bacteria 4020257
200 2945971792 2945968032 Bacteria 4111363
201 2946033764 2946033335 Bacteria 3835514
202 2946044248 2946041624 Bacteria 4191385
203 2946080907 2946080515 Bacteria 4310960
204 8057349466 8057345674 Bacteria 4160394
205 Ga0501031_0006632
206 LJQas_1002493
207 JGI24740J21852_10032229
208 JGI24740J21852_10039227
209 JGI24739J22299_10032866
210 JGI24737J22298_10008999
211 JGI24735J21928_10000284
212 Ga0006562J51391_1042749
213 Ga0006562J51391_1042752
214 Ga0070668_100140603
215 Ga0070671_100004228
216 Ga0068867_100122714
217 Ga0070685_10072626
218 Ga0070672_100122261
219 Ga0070665_100001091
220 Ga0070665_100003260
221 Ga0070702_100095801
222 Ga0068860_100014160
223 Ga0075365_10016814
224 Ga0075365_10032755
225 Ga0075368_10019865
226 Ga0075363_100105074
227 Ga0075364_10013180
228 Ga0075364_10051904
229 Ga0075364_10067779
230 Ga0075364_10129129
231 Ga0075367_10000964
232 Ga0075367_10047087
233 Ga0075428_100126965
234 Ga0075431_100096770
235 Ga0075429_100069896
236 Ga0105247_10179516
237 Ga0114129_10077764
238 Ga0157369_10247586
239 Ga0157375_10034073
240 Ga0163163_10040582
241 Ga0157380_10269682
242 Ga0163161_10063042
243 Ga0224712_10011625
244 Ga0207644_10016221
245 Ga0207704_10148781
246 Ga0207712_10218236
247 Ga0207668_10030394
248 Ga0207668_10156912
249 Ga0207678_10223763
250 Ga0207641_10216488
251 Ga0207648_10064636
252 Ga0207675_100239533
253 Ga0207683_10074200
254 Ga0209813_10042658
255 Ga0268266_10002426
256 Ga0268264_10010464
257 Ga0265338_10180782
258 Ga0265327_10000118
259 Ga0265327_10003713
260 Ga0307410_10203186
261 Ga0307406_10009576
262 Ga0307406_10099850
263 Ga0395898_0174308
264 Ga0400485_06573
265 Ga0400485_16121
266 Ga0400486_07550
267 Ga0400483_024763
268 Ga0400483_042783
269 Ga0400483_085293
270 Ga0400483_125287
271 Ga0400483_207965
272 Ga0400483_224325
273 Ga0400483_266267
274 Ga0400483_276324
275 Ga0400489_17547
276 Ga0400489_40511
277 Ga0400487_16496
278 Ga0439466_0004155
279 Ga0451791_0811100
280 Ga0451833_0641702
281 Ga0439431_0002798
282 Ga0439434_0032147
283 Ga0495627_002939
284 Ga0495651_0013298
285 Ga0495653_0140014
286 Ga0495608_0009582
287 Ga0495587_0022802
288 Ga0495645_0033376
289 Ga0495656_0107895
290 Ga0495657_0010383
291 Ga0495623_0149365
292 Ga0495658_0037276
293 Ga0495604_0016380
294 Ga0495672_0006388
295 Ga0495672_0081003
296 Ga0495680_0216214
297 Ga0495675_0051456
298 Ga0495602_0059409
299 Ga0496105_0082884
300 Ga0496105_0239825
301 Ga0496108_0015827
302 Ga0496109_0068858
303 Ga0496109_0211281
304 Ga0496109_0321135
305 Ga0496116_0096854
306 Ga0496117_0008965
307 Ga0496117_0032167
308 Ga0496117_0042133
309 Ga0496118_0100369
310 Ga0496122_0021729
311 Ga0496124_0133774
312 Ga0496125_0000640
313 Ga0496125_0011812
314 Ga0496125_0064539
315 Ga0496126_0002922
316 Ga0496126_0008994
317 Ga0496126_0158668
318 Ga0501031_0004974
319 Ga0501032_0011120
320 Ga0501032_0013736
321 Ga0501033_0049185
322 Ga0501033_0060111
323 Ga0501034_0006121
324 Ga0501034_0028852
325 Ga0501034_0150233
326 Ga0501036_0012184
327 Ga0501036_0025079
328 Ga0501037_0011324
329 Ga0501037_0097466
330 Ga0501038_0040690
331 Ga0501038_0047371
332 Ga0501039_0005716
333 Ga0501039_0103493
334 Ga0501042_0018418
335 Ga0501043_0005122
336 Ga0501043_0013635
337 Ga0501043_0161436
338 Ga0501046_0006195
339 Ga0501046_0095289
340 Ga0501047_0017634
341 Ga0501047_0069014
342 Ga0501048_0005584
343 Ga0501048_0005889
344 Ga0501068_0013845
345 Ga0501070_0017130
346 Ga0501070_0017138
347 Ga0501073_0018548
348 Ga0501073_0122097
349 Ga0501074_0036936
350 Ga0501080_0303248
351 Ga0501080_0308949
352 Ga0501035_0020482
353 Ga0501035_0031283
354 Ga0501035_0041619
355 Ga0501035_0065908
356 Ga0501044_0000966
357 Ga0501044_0027105
358 Ga0501044_0059271
359 Ga0501045_0013487
360 nmdc:mga00v17_14022_c1
361 nmdc:mga00v17_160218_c1
362 nmdc:mga00v17_43988_c1
363 nmdc:mga00v17_72707_c1
364 nmdc:mga0yw44_22654_c1
365 nmdc:mga0yw44_85512_c1
366 nmdc:mga06z11_77270_c1
367 nmdc:mga06z11_98938_c1
368 nmdc:mga04h51_33594_c1
369 nmdc:mga05p37_72281_c1
370 nmdc:mga09592_64993_c1
371 nmdc:mga06r32_232204_c1
372 Ga0500635_0000192
373 Ga0500635_0003283
374 Ga0500635_0028701
375 Ga0495595_0002295
376 Ga0495619_0037406
377 Ga0500566_0000485
378 Ga0500568_0000510
379 Ga0500604_0022294
380 Ga0500616_0000090
381 Ga0500616_0008751
382 2643733627
383 2643887381
384 2643890438
385 2643959494
386 2644095244
387 2644170202
388 2644183386
389 2644503081
390 2644636600
391 2738667769
392 2738840807
393 2739146839
394 2844843588
395 2852647316
396 2852665296
397 2857723842
398 2868095459
399 2870784704
400 2902814561
401 2906802573
402 2919055581
403 2928153722
404 2945971792
405 2946033764
406 2946044248
407 2946080907
408 8057349466

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07755

DUF1611

Domain of unknown function (DUF1611_C) P-loop domain

220

408

0.98

PF17396

DUF1611_N

Domain of unknown function (DUF1611_N) Rossmann-like domain

115

213

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2obn-assembly1.cif.gz_B crystal structure of a duf1611 family protein (ava_3511) from anabaena variabilis atcc 29413 at 2.30 a resolution 0.8437 35 360
2obn-assembly2.cif.gz_C crystal structure of a duf1611 family protein (ava_3511) from anabaena variabilis atcc 29413 at 2.30 a resolution 0.8422 31 360
2obn-assembly1.cif.gz_A crystal structure of a duf1611 family protein (ava_3511) from anabaena variabilis atcc 29413 at 2.30 a resolution 0.84 35 360
2obn-assembly2.cif.gz_C crystal structure of a duf1611 family protein (ava_3511) from anabaena variabilis atcc 29413 at 2.30 a resolution 0.8061 31 360
2obn-assembly1.cif.gz_B crystal structure of a duf1611 family protein (ava_3511) from anabaena variabilis atcc 29413 at 2.30 a resolution 0.8024 35 360
ID Description Score Start End Superfamily
2obnD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9054 149 359 3.40.50.300
2g0tB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8976 158 362 3.40.50.300
2obnD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8971 149 359 3.40.50.300
2g0tB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8841 158 362 3.40.50.300
2g0tA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.6845 33 153 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7V0NN72-F1-model_v4 DUF1611 domain-containing protein 0.9853 224 367
AF-W7QEP8-F1-model_v4 D-glutamate N-acetyltransferase-like C-terminal domain-containing protein 0.9848 251 367
AF-A0A3C0LZ63-F1-model_v4 deleted 0.9831 197 273
AF-A0A0H3ZRA0-F1-model_v4 Protein often near L-alanine-DL-glutamate epimerase (Cell wall recycling) 0.9783 295 367
AF-A0A662AHU1-F1-model_v4 DUF1611 domain-containing protein 0.9773 218 367

Map