F312552

General Info

Members Datasets Scaffolds Average Seq Length
204 74 188 148

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10157565|Ga0157372_101575652
Length 148
Sequence VNGLEAFDARLNALIGNLSPAARKEMARTIAKRLRAGQQQNIKRQQAPDGTAFKPRKAPARKKKGRIKREMFARLRTAKYMKAKGTADDSVVEFTGNVQRMARVHHYGLRDRPARGGKEVQYEARQLLGINGSGKKQVFDIIINNVIS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
3 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
4 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
5 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
6 2919150387 Rahnella aceris 1817 Isolate Unclassified
7 2927143783 Rahnella sp. 2050 Isolate Unclassified
8 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
9 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
10 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
11 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
12 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
13 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
14 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
15 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
16 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
17 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
18 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
21 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
22 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
23 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
33 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
39 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
41 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
46 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
47 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
48 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
49 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
50 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
51 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
52 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
53 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
54 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
55 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
56 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
57 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
58 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
59 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
60 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
63 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
64 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
65 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
66 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
67 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
68 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
69 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
70 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
71 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
72 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
73 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
74 8019499862 Kluyvera sp. 1366 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.63
Metatranscriptomes 0
Isolates 6.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.67
Nodule 1.47
Rhizoplane 2.94
Rhizosphere 44.12
Stem 0
Stem Tuber 0
Unclassified 34.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2664149 2162886007 Bacteria 2962
2 SwRhRL2b_contig_3510989 2162886007 Bacteria 1104
3 JGI25162J39368_1000002 3300002737 Bacteria 663004
4 JGI25162J39368_1000218 3300002737 Bacteria 59813
5 JGI25163J39215_1000003 3300002771 Bacteria 149140
6 JGI25163J39215_1001052 3300002771 Bacteria 5898
7 JGI25164J39214_1000041 3300002772 Bacteria 127466
8 JGI25164J39214_1000171 3300002772 Bacteria 60263
9 Ga0055538_1000003 3300003751 Bacteria 663004
10 Ga0055538_1000120 3300003751 Bacteria 59813
11 Ga0055539_1000003 3300003752 Bacteria 663004
12 Ga0055539_1000165 3300003752 Bacteria 59813
13 Ga0055533_1000005 3300003756 Bacteria 663004
14 Ga0055533_1000165 3300003756 Bacteria 61073
15 Ga0055525_1000005 3300003759 Bacteria 663004
16 Ga0055525_1000230 3300003759 Bacteria 59813
17 Ga0055541_1000003 3300003841 Bacteria 663004
18 Ga0055541_1000108 3300003841 Bacteria 61074
19 Ga0058692_1000058 3300003856 Bacteria 99195
20 Ga0058692_1000076 3300003856 Bacteria 75166
21 Ga0065704_10000974 3300005289 Bacteria 10432
22 Ga0065704_10005810 3300005289 Bacteria 3183
23 Ga0065704_10112247 3300005289 Bacteria 1899
24 Ga0065704_10112696 3300005289 Bacteria 1928
25 Ga0079104_1070141 3300006946 Bacteria 737
26 Ga0105251_10043575 3300009011 Bacteria 2172
27 Ga0105244_10000715 3300009036 Bacteria 28677
28 Ga0105244_10009149 3300009036 Bacteria 6112
29 Ga0105244_10019212 3300009036 Bacteria 3821
30 Ga0105244_10038616 3300009036 Bacteria 2489
31 Ga0105244_10072738 3300009036 Bacteria 1712
32 Ga0105244_10086587 3300009036 Bacteria 1544
33 Ga0105250_10000513 3300009092 Bacteria 27074
34 Ga0105250_10000529 3300009092 Bacteria 26559
35 Ga0105250_10001019 3300009092 Bacteria 16198
36 Ga0105250_10007977 3300009092 Bacteria 4519
37 Ga0105250_10010815 3300009092 Bacteria 3796
38 Ga0105250_10012224 3300009092 Bacteria 3547
39 Ga0105250_10014297 3300009092 Bacteria 3264
40 Ga0105250_10016076 3300009092 Bacteria 3054
41 Ga0105250_10022515 3300009092 Bacteria 2540
42 Ga0105241_10222086 3300009174 Bacteria 1589
43 Ga0105246_10012565 3300011119 Bacteria 5289
44 Ga0105246_10022532 3300011119 Bacteria 4064
45 Ga0157373_10005009 3300013100 Bacteria 9948
46 Ga0157373_10008176 3300013100 Bacteria 7781
47 Ga0157373_10011518 3300013100 Bacteria 6499
48 Ga0157371_10000305 3300013102 Bacteria 64403
49 Ga0157371_10000582 3300013102 Bacteria 43271
50 Ga0157371_10012718 3300013102 Bacteria 6417
51 Ga0157371_10025380 3300013102 Bacteria 4319
52 Ga0157371_10083789 3300013102 Bacteria 2258
53 Ga0157371_10530136 3300013102 Bacteria 872
54 Ga0157370_10025809 3300013104 Bacteria 5812
55 Ga0157370_11736540 3300013104 Bacteria 560
56 Ga0157369_10052645 3300013105 Bacteria 4404
57 Ga0157369_10057793 3300013105 Bacteria 4183
58 Ga0157369_10084820 3300013105 Bacteria 3385
59 Ga0157369_10193539 3300013105 Bacteria 2136
60 Ga0157369_10200971 3300013105 Bacteria 2092
61 Ga0157372_10009848 3300013307 Bacteria 10165
62 Ga0157372_10010729 3300013307 Bacteria 9752
63 Ga0157372_10157565 3300013307 Bacteria 2623
64 Ga0157372_10517155 3300013307 Bacteria 1392
65 Ga0157375_10386536 3300013308 Bacteria 1566
66 Ga0209760_100002 3300025207 Bacteria 274743
67 Ga0209760_100633 3300025207 Bacteria 5925
68 Ga0209784_100001 3300025224 Bacteria 3600592
69 Ga0209566_100001 3300025225 Bacteria 3600765
70 Ga0209674_100002 3300025226 Bacteria 3600592
71 Ga0209563_100002 3300025230 Bacteria 2045675
72 Ga0209563_100008 3300025230 Bacteria 1554545
73 Ga0207427_100009 3300025231 Bacteria 663036
74 Ga0207427_100012 3300025231 Bacteria 585657
75 Ga0209437_100001 3300025233 Bacteria 2045675
76 Ga0209437_100007 3300025233 Bacteria 938377
77 Ga0209677_100002 3300025253 Bacteria 2045675
78 Ga0209677_100004 3300025253 Bacteria 1554545
79 Ga0209233_1002074 3300025261 Bacteria 7587
80 Ga0209233_1005499 3300025261 Bacteria 4195
81 Ga0207696_1000062 3300025711 Bacteria 239603
82 Ga0207696_1000483 3300025711 Bacteria 33546
83 Ga0207696_1000514 3300025711 Bacteria 32164
84 Ga0207696_1002473 3300025711 Bacteria 9034
85 Ga0207696_1004003 3300025711 Bacteria 6470
86 Ga0207696_1006111 3300025711 Bacteria 4897
87 Ga0207696_1006883 3300025711 Bacteria 4522
88 Ga0207696_1011142 3300025711 Bacteria 3253
89 Ga0207696_1016942 3300025711 Bacteria 2425
90 Ga0207655_1001249 3300025728 Bacteria 24248
91 Ga0207655_1013809 3300025728 Bacteria 4609
92 Ga0207655_1015665 3300025728 Bacteria 4199
93 Ga0207655_1094898 3300025728 Bacteria 1041
94 Ga0207655_1108462 3300025728 Bacteria 942
95 Ga0207713_1126197 3300025735 Bacteria 852
96 Ga0207706_10281500 3300025933 Bacteria 1450
97 Ga0209281_1000089 3300027111 Bacteria 243650
98 Ga0209281_1003755 3300027111 Bacteria 4834
99 Ga0209371_1000085 3300027312 Bacteria 179586
100 Ga0209371_1018483 3300027312 Bacteria 1770
101 Ga0209371_1023453 3300027312 Bacteria 1453
102 Ga0268256_1000048 3300030500 Bacteria 312298
103 Ga0268256_1022625 3300030500 Bacteria 1644
104 Ga0268256_1026560 3300030500 Bacteria 1453
105 Ga0439438_035166 3300041405 Bacteria 1317
106 Ga0439466_0000013 3300041411 Bacteria 134749
107 Ga0439466_0258384 3300041411 Bacteria 527
108 Ga0439432_122629 3300042006 Bacteria 769
109 Ga0439456_050545 3300042013 Bacteria 908
110 Ga0439464_0060477 3300042439 Bacteria 1108
111 Ga0495650_0000004 3300046471 Bacteria 779487
112 Ga0495650_0000120 3300046471 Bacteria 184191
113 Ga0495648_0058816 3300046524 Bacteria 2296
114 Ga0495654_0000204 3300046530 Bacteria 56840
115 Ga0495654_0000387 3300046530 Bacteria 38013
116 Ga0495668_0121584 3300046616 Bacteria 1428
117 Ga0495649_0001707 3300046694 Bacteria 16284
118 Ga0495660_0000010 3300046810 Bacteria 370769
119 Ga0496100_0244486 3300048903 Bacteria 1325
120 Ga0496101_0000242 3300048904 Bacteria 40390
121 Ga0496104_0001846 3300048907 Bacteria 18322
122 Ga0496104_0054370 3300048907 Bacteria 3784
123 Ga0496105_0309238 3300048908 Bacteria 1269
124 Ga0496116_0000016 3300048919 Bacteria 555146
125 Ga0496116_0080581 3300048919 Bacteria 2021
126 Ga0496116_0094034 3300048919 Bacteria 1813
127 Ga0496116_0197692 3300048919 Bacteria 1056
128 Ga0496116_0246445 3300048919 Bacteria 893
129 Ga0496117_0001134 3300048920 Bacteria 40197
130 Ga0496117_0008282 3300048920 Bacteria 9895
131 Ga0496117_0009183 3300048920 Bacteria 9264
132 Ga0496117_0010096 3300048920 Bacteria 8666
133 Ga0496117_0032714 3300048920 Bacteria 3947
134 Ga0496117_0040728 3300048920 Viruses 3412
135 Ga0496118_0000767 3300048921 Bacteria 51508
136 Ga0496118_0000924 3300048921 Bacteria 45908
137 Ga0496118_0004049 3300048921 Bacteria 17789
138 Ga0496118_0010325 3300048921 Bacteria 9260
139 Ga0496118_0016402 3300048921 Bacteria 6799
140 Ga0496118_0025771 3300048921 Bacteria 5030
141 Ga0496118_0046735 3300048921 Bacteria 3364
142 Ga0496119_0000111 3300048922 Bacteria 114905
143 Ga0496119_0001085 3300048922 Bacteria 34370
144 Ga0496119_0003311 3300048922 Bacteria 16813
145 Ga0496119_0009003 3300048922 Bacteria 8663
146 Ga0496119_0012591 3300048922 Bacteria 6851
147 Ga0496120_0000152 3300048923 Bacteria 114905
148 Ga0496120_0001055 3300048923 Bacteria 36482
149 Ga0496120_0001422 3300048923 Bacteria 28874
150 Ga0496120_0002785 3300048923 Bacteria 16968
151 Ga0496120_0005818 3300048923 Bacteria 9660
152 Ga0496121_0000544 3300048924 Bacteria 71622
153 Ga0496122_0000058 3300048925 Bacteria 248805
154 Ga0496122_0000481 3300048925 Bacteria 82890
155 Ga0496122_0002486 3300048925 Bacteria 26055
156 Ga0496122_0017310 3300048925 Bacteria 6750
157 Ga0496123_0000044 3300048926 Bacteria 253396
158 Ga0496123_0000385 3300048926 Bacteria 82890
159 Ga0496123_0002323 3300048926 Bacteria 23877
160 Ga0496124_0000026 3300048927 Bacteria 385387
161 Ga0496124_0000105 3300048927 Bacteria 176783
162 Ga0496124_0000140 3300048927 Bacteria 149743
163 Ga0496124_0001642 3300048927 Bacteria 32038
164 Ga0496124_0001955 3300048927 Bacteria 28142
165 Ga0496124_0002310 3300048927 Bacteria 25180
166 Ga0496124_0002653 3300048927 Bacteria 22967
167 Ga0496124_0020088 3300048927 Bacteria 6185
168 Ga0496124_0023324 3300048927 Bacteria 5650
169 Ga0496124_0040889 3300048927 Bacteria 4005
170 Ga0496124_0041113 3300048927 Bacteria 3993
171 Ga0496124_0076080 3300048927 Bacteria 2772
172 Ga0496125_0000943 3300048928 Bacteria 45676
173 Ga0496125_0001940 3300048928 Bacteria 28254
174 Ga0496125_0013825 3300048928 Bacteria 7904
175 Ga0496125_0045614 3300048928 Bacteria 3686
176 Ga0496126_0001761 3300048929 Bacteria 32026
177 Ga0496126_0001846 3300048929 Bacteria 30902
178 Ga0496126_0002139 3300048929 Bacteria 27526
179 Ga0496126_0002847 3300048929 Bacteria 22634
180 Ga0496126_0003615 3300048929 Bacteria 19341
181 Ga0496126_0005150 3300048929 Bacteria 15122
182 Ga0496126_0011931 3300048929 Bacteria 8934
183 Ga0496126_0021165 3300048929 Bacteria 6358
184 Ga0496126_0093110 3300048929 Bacteria 2646
185 Ga0496126_0108942 3300048929 Bacteria 2414
186 Ga0496126_0124940 3300048929 Bacteria 2228
187 Ga0496126_0368671 3300048929 Bacteria 1171
188 Ga0496126_0380864 3300048929 Bacteria 1148

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300002737 JGI25162J39368_1000218 JGI25162J39368_100021852 129
2 3300002771 JGI25163J39215_1001052 JGI25163J39215_10010522 129
3 3300002772 JGI25164J39214_1000171 JGI25164J39214_100017153 129
4 3300003751 Ga0055538_1000120 Ga0055538_100012052 129
5 3300003752 Ga0055539_1000165 Ga0055539_100016552 129
6 3300003756 Ga0055533_1000165 Ga0055533_100016554 129
7 3300003759 Ga0055525_1000230 Ga0055525_10002305 129
8 3300003841 Ga0055541_1000108 Ga0055541_100010853 129
9 3300025207 Ga0209760_100633 Ga0209760_1006334 130
10 3300025224 Ga0209784_100001 Ga0209784_1000011280 130
11 3300025225 Ga0209566_100001 Ga0209566_1000011280 130
12 3300025226 Ga0209674_100002 Ga0209674_1000021280 130
13 3300025230 Ga0209563_100008 Ga0209563_1000081282 130
14 3300025231 Ga0207427_100012 Ga0207427_10001251 130
15 3300025233 Ga0209437_100007 Ga0209437_100007734 130
16 3300025253 Ga0209677_100004 Ga0209677_1000041282 130
17 3300025261 Ga0209233_1002074 Ga0209233_10020742 130
18 iso_pu_bacteria 2844528606 2844528690 144
19 iso_pu_bacteria 2978975091 2978979226 144
20 iso_pu_bacteria 2585427591 2585825345 145
21 iso_pu_bacteria 2585427591 2585825732 145
22 iso_pu_bacteria 2667528173 2671106360 145
23 iso_pu_bacteria 2904474040 2904474500 145
24 iso_pu_bacteria 2904474040 2904477967 145
25 iso_pu_bacteria 2919150387 2919150846 145
26 iso_pu_bacteria 2919150387 2919154069 145
27 iso_pu_bacteria 2927143783 2927145720 145
28 iso_pu_bacteria 2927143783 2927147606 145
29 iso_pu_bacteria 2939602548 2939604147 145
30 3300009036 Ga0105244_10019212 Ga0105244_100192122 147
31 3300013308 Ga0157375_10386536 Ga0157375_103865362 147
32 3300025728 Ga0207655_1015665 Ga0207655_10156656 147
33 3300027312 Ga0209371_1023453 Ga0209371_10234532 147
34 3300030500 Ga0268256_1026560 Ga0268256_10265602 147
35 3300046810 Ga0495660_0000010 Ga0495660_0000010_39636_40079 147
36 3300009036 Ga0105244_10038616 Ga0105244_100386164 148
37 3300009036 Ga0105244_10072738 Ga0105244_100727382 148
38 3300009036 Ga0105244_10086587 Ga0105244_100865872 148
39 3300009092 Ga0105250_10007977 Ga0105250_100079772 148
40 3300009092 Ga0105250_10010815 Ga0105250_100108155 148
41 3300013100 Ga0157373_10008176 Ga0157373_100081768 148
42 3300013102 Ga0157371_10000305 Ga0157371_1000030562 148
43 3300013102 Ga0157371_10083789 Ga0157371_100837893 148
44 3300013104 Ga0157370_10025809 Ga0157370_100258094 148
45 3300013104 Ga0157370_11736540 Ga0157370_117365402 148
46 3300013105 Ga0157369_10084820 Ga0157369_100848205 148
47 3300013307 Ga0157372_10010729 Ga0157372_1001072911 148
48 3300013307 Ga0157372_10157565 Ga0157372_101575652 148
49 3300013307 Ga0157372_10517155 Ga0157372_105171552 148
50 3300025711 Ga0207696_1002473 Ga0207696_10024734 148
51 3300025711 Ga0207696_1004003 Ga0207696_10040037 148
52 3300025728 Ga0207655_1094898 Ga0207655_10948982 148
53 3300025728 Ga0207655_1108462 Ga0207655_11084622 148
54 3300041411 Ga0439466_0258384 Ga0439466_0258384_27_473 148
55 3300046530 Ga0495654_0000387 Ga0495654_0000387_13746_14192 148
56 3300046694 Ga0495649_0001707 Ga0495649_0001707_2901_3347 148
57 3300048904 Ga0496101_0000242 Ga0496101_0000242_4223_4669 148
58 3300048908 Ga0496105_0309238 Ga0496105_0309238_493_939 148
59 3300048919 Ga0496116_0080581 Ga0496116_0080581_790_1236 148
60 3300048920 Ga0496117_0009183 Ga0496117_0009183_4360_4806 148
61 3300048920 Ga0496117_0040728 Ga0496117_0040728_761_1207 148
62 3300048921 Ga0496118_0016402 Ga0496118_0016402_1895_2341 148
63 3300048921 Ga0496118_0046735 Ga0496118_0046735_2423_2869 148
64 3300048922 Ga0496119_0000111 Ga0496119_0000111_87814_88260 148
65 3300048922 Ga0496119_0003311 Ga0496119_0003311_14628_15074 148
66 3300048923 Ga0496120_0000152 Ga0496120_0000152_87814_88260 148
67 3300048923 Ga0496120_0002785 Ga0496120_0002785_1740_2186 148
68 3300048925 Ga0496122_0002486 Ga0496122_0002486_12935_13381 148
69 3300048926 Ga0496123_0002323 Ga0496123_0002323_10930_11376 148
70 iso_pu_bacteria 8019499862 8019503369 148
71 2162886007 SwRhRL2b_contig_2664149 SwRhRL2b_0225.00004480 149
72 2162886007 SwRhRL2b_contig_3510989 SwRhRL2b_0769.00008130 149
73 3300002737 JGI25162J39368_1000002 JGI25162J39368_1000002617 149
74 3300002771 JGI25163J39215_1000003 JGI25163J39215_10000034 149
75 3300002772 JGI25164J39214_1000041 JGI25164J39214_10000414 149
76 3300003751 Ga0055538_1000003 Ga0055538_1000003617 149
77 3300003752 Ga0055539_1000003 Ga0055539_10000034 149
78 3300003756 Ga0055533_1000005 Ga0055533_10000054 149
79 3300003759 Ga0055525_1000005 Ga0055525_1000005617 149
80 3300003841 Ga0055541_1000003 Ga0055541_1000003617 149
81 3300003856 Ga0058692_1000058 Ga0058692_100005849 149
82 3300003856 Ga0058692_1000076 Ga0058692_100007673 149
83 3300005289 Ga0065704_10000974 Ga0065704_100009746 149
84 3300005289 Ga0065704_10005810 Ga0065704_100058102 149
85 3300005289 Ga0065704_10112247 Ga0065704_101122472 149
86 3300005289 Ga0065704_10112696 Ga0065704_101126962 149
87 3300006946 Ga0079104_1070141 Ga0079104_10701411 149
88 3300009011 Ga0105251_10043575 Ga0105251_100435755 149
89 3300009036 Ga0105244_10000715 Ga0105244_1000071518 149
90 3300009036 Ga0105244_10009149 Ga0105244_100091493 149
91 3300009092 Ga0105250_10000513 Ga0105250_100005138 149
92 3300009092 Ga0105250_10000529 Ga0105250_1000052924 149
93 3300009092 Ga0105250_10001019 Ga0105250_100010195 149
94 3300009092 Ga0105250_10012224 Ga0105250_100122243 149
95 3300009092 Ga0105250_10014297 Ga0105250_100142975 149
96 3300009092 Ga0105250_10016076 Ga0105250_100160762 149
97 3300009092 Ga0105250_10022515 Ga0105250_100225152 149
98 3300009174 Ga0105241_10222086 Ga0105241_102220861 149
99 3300011119 Ga0105246_10012565 Ga0105246_100125655 149
100 3300011119 Ga0105246_10022532 Ga0105246_100225324 149
101 3300013100 Ga0157373_10005009 Ga0157373_1000500915 149
102 3300013100 Ga0157373_10011518 Ga0157373_100115188 149
103 3300013102 Ga0157371_10000582 Ga0157371_1000058243 149
104 3300013102 Ga0157371_10012718 Ga0157371_100127187 149
105 3300013102 Ga0157371_10025380 Ga0157371_100253806 149
106 3300013102 Ga0157371_10530136 Ga0157371_105301362 149
107 3300013105 Ga0157369_10052645 Ga0157369_100526455 149
108 3300013105 Ga0157369_10057793 Ga0157369_100577935 149
109 3300013105 Ga0157369_10193539 Ga0157369_101935393 149
110 3300013105 Ga0157369_10200971 Ga0157369_102009712 149
111 3300013307 Ga0157372_10009848 Ga0157372_1000984811 149
112 3300025207 Ga0209760_100002 Ga0209760_10000296 149
113 3300025224 Ga0209784_100001 Ga0209784_1000012763 149
114 3300025225 Ga0209566_100001 Ga0209566_1000012763 149
115 3300025226 Ga0209674_100002 Ga0209674_1000022763 149
116 3300025230 Ga0209563_100002 Ga0209563_1000021298 149
117 3300025231 Ga0207427_100009 Ga0207427_100009610 149
118 3300025233 Ga0209437_100001 Ga0209437_1000011298 149
119 3300025253 Ga0209677_100002 Ga0209677_1000021298 149
120 3300025261 Ga0209233_1005499 Ga0209233_10054994 149
121 3300025711 Ga0207696_1000062 Ga0207696_100006223 149
122 3300025711 Ga0207696_1000483 Ga0207696_100048317 149
123 3300025711 Ga0207696_1000514 Ga0207696_100051426 149
124 3300025711 Ga0207696_1006111 Ga0207696_10061114 149
125 3300025711 Ga0207696_1006883 Ga0207696_10068836 149
126 3300025711 Ga0207696_1011142 Ga0207696_10111424 149
127 3300025711 Ga0207696_1016942 Ga0207696_10169423 149
128 3300025728 Ga0207655_1001249 Ga0207655_10012497 149
129 3300025728 Ga0207655_1013809 Ga0207655_10138094 149
130 3300025735 Ga0207713_1126197 Ga0207713_11261972 149
131 3300025933 Ga0207706_10281500 Ga0207706_102815001 149
132 3300027111 Ga0209281_1000089 Ga0209281_1000089136 149
133 3300027111 Ga0209281_1003755 Ga0209281_10037559 149
134 3300027312 Ga0209371_1000085 Ga0209371_100008595 149
135 3300027312 Ga0209371_1018483 Ga0209371_10184832 149
136 3300030500 Ga0268256_1000048 Ga0268256_100004895 149
137 3300030500 Ga0268256_1022625 Ga0268256_10226252 149
138 3300041405 Ga0439438_035166 Ga0439438_035166_87_539 149
139 3300041411 Ga0439466_0000013 Ga0439466_0000013_86290_86742 149
140 3300042006 Ga0439432_122629 Ga0439432_122629_196_645 149
141 3300042013 Ga0439456_050545 Ga0439456_050545_377_826 149
142 3300042439 Ga0439464_0060477 Ga0439464_0060477_98_547 149
143 3300046471 Ga0495650_0000004 Ga0495650_0000004_514885_515343 149
144 3300046471 Ga0495650_0000120 Ga0495650_0000120_149431_149889 149
145 3300046524 Ga0495648_0058816 Ga0495648_0058816_1573_2025 149
146 3300046530 Ga0495654_0000204 Ga0495654_0000204_13439_13888 149
147 3300046616 Ga0495668_0121584 Ga0495668_0121584_934_1392 149
148 3300048903 Ga0496100_0244486 Ga0496100_0244486_254_706 149
149 3300048907 Ga0496104_0001846 Ga0496104_0001846_17854_18303 149
150 3300048907 Ga0496104_0054370 Ga0496104_0054370_858_1316 149
151 3300048919 Ga0496116_0000016 Ga0496116_0000016_386341_386799 149
152 3300048919 Ga0496116_0094034 Ga0496116_0094034_685_1137 149
153 3300048919 Ga0496116_0197692 Ga0496116_0197692_493_951 149
154 3300048919 Ga0496116_0246445 Ga0496116_0246445_81_536 149
155 3300048920 Ga0496117_0001134 Ga0496117_0001134_18687_19145 149
156 3300048920 Ga0496117_0008282 Ga0496117_0008282_672_1130 149
157 3300048920 Ga0496117_0010096 Ga0496117_0010096_86_538 149
158 3300048920 Ga0496117_0032714 Ga0496117_0032714_308_757 149
159 3300048921 Ga0496118_0000767 Ga0496118_0000767_42423_42881 149
160 3300048921 Ga0496118_0000924 Ga0496118_0000924_14810_15268 149
161 3300048921 Ga0496118_0004049 Ga0496118_0004049_7337_7786 149
162 3300048921 Ga0496118_0010325 Ga0496118_0010325_8321_8770 149
163 3300048921 Ga0496118_0025771 Ga0496118_0025771_2605_3057 149
164 3300048922 Ga0496119_0001085 Ga0496119_0001085_18464_18913 149
165 3300048922 Ga0496119_0009003 Ga0496119_0009003_6547_6999 149
166 3300048922 Ga0496119_0012591 Ga0496119_0012591_4016_4474 149
167 3300048923 Ga0496120_0001055 Ga0496120_0001055_20576_21025 149
168 3300048923 Ga0496120_0001422 Ga0496120_0001422_19326_19784 149
169 3300048923 Ga0496120_0005818 Ga0496120_0005818_1689_2141 149
170 3300048924 Ga0496121_0000544 Ga0496121_0000544_12488_12943 149
171 3300048925 Ga0496122_0000058 Ga0496122_0000058_185210_185659 149
172 3300048925 Ga0496122_0000481 Ga0496122_0000481_67575_68033 149
173 3300048925 Ga0496122_0017310 Ga0496122_0017310_3740_4189 149
174 3300048926 Ga0496123_0000044 Ga0496123_0000044_185210_185659 149
175 3300048926 Ga0496123_0000385 Ga0496123_0000385_14858_15316 149
176 3300048927 Ga0496124_0000026 Ga0496124_0000026_136289_136747 149
177 3300048927 Ga0496124_0000105 Ga0496124_0000105_160808_161263 149
178 3300048927 Ga0496124_0000140 Ga0496124_0000140_7203_7661 149
179 3300048927 Ga0496124_0001642 Ga0496124_0001642_4220_4675 149
180 3300048927 Ga0496124_0001955 Ga0496124_0001955_10958_11416 149
181 3300048927 Ga0496124_0002310 Ga0496124_0002310_7936_8394 149
182 3300048927 Ga0496124_0002653 Ga0496124_0002653_20168_20620 149
183 3300048927 Ga0496124_0020088 Ga0496124_0020088_5531_5989 149
184 3300048927 Ga0496124_0023324 Ga0496124_0023324_2522_2980 149
185 3300048927 Ga0496124_0040889 Ga0496124_0040889_722_1180 149
186 3300048927 Ga0496124_0041113 Ga0496124_0041113_3005_3463 149
187 3300048927 Ga0496124_0076080 Ga0496124_0076080_358_810 149
188 3300048928 Ga0496125_0000943 Ga0496125_0000943_12934_13383 149
189 3300048928 Ga0496125_0001940 Ga0496125_0001940_2597_3055 149
190 3300048928 Ga0496125_0013825 Ga0496125_0013825_3907_4365 149
191 3300048928 Ga0496125_0045614 Ga0496125_0045614_2376_2834 149
192 3300048929 Ga0496126_0001761 Ga0496126_0001761_14623_15081 149
193 3300048929 Ga0496126_0001846 Ga0496126_0001846_18614_19072 149
194 3300048929 Ga0496126_0002139 Ga0496126_0002139_16635_17087 149
195 3300048929 Ga0496126_0002847 Ga0496126_0002847_6222_6686 149
196 3300048929 Ga0496126_0003615 Ga0496126_0003615_16541_16999 149
197 3300048929 Ga0496126_0005150 Ga0496126_0005150_6635_7093 149
198 3300048929 Ga0496126_0011931 Ga0496126_0011931_5320_5769 149
199 3300048929 Ga0496126_0021165 Ga0496126_0021165_216_674 149
200 3300048929 Ga0496126_0093110 Ga0496126_0093110_1890_2348 149
201 3300048929 Ga0496126_0108942 Ga0496126_0108942_384_842 149
202 3300048929 Ga0496126_0124940 Ga0496126_0124940_124_609 149
203 3300048929 Ga0496126_0368671 Ga0496126_0368671_430_879 149
204 3300048929 Ga0496126_0380864 Ga0496126_0380864_504_956 149

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05069

Phage_tail_S

Phage virion morphogenesis family

3

147

0.92

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pLDDT pTM Quality
75.27 0.32 Low
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Predicted Structure (AlphaFold2)

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