F311882

General Info

Members Datasets Scaffolds Average Seq Length
203 147 406 343

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2582581312|2585299818
Length 383
Sequence RTKRGPHSISRTQQAPHGAHGNDLDMDASQFRRRVYRLLLPLTAGACAIALVSGCTDSDSARADATKSASPQQRPTSAGDLQAEYQAVIKNVLPTVVQIQAANNIGSGVVYDDKGHIVTNAHVVGREKTFKVTVATGERVLGASLVATYPAQDLAVIKLDNVPSGLKAATFGDSEKVEVGQIVLAMGSPLGLSSSVTQGIVSAVGRTVSESPAGGGTGATIANMVQTSAAINPGNSGGALVNLNSEVIGIPTLAATDPQMNGAAPGIGFAIPVSMVKTVADQIIKSGKVTDSGRAALNIIGRTVVDDSYQPVGVALVSVTAGGGADKAGLRVGDIVTKIGDTRITTMTALAEALANDKPGQKVEVTYLRDGVEKTTVVTLGEI

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
4 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
5 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
6 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
7 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
8 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
9 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
10 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
11 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
12 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
13 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
14 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
15 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
16 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
17 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
18 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
19 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
20 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
21 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
22 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
23 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
24 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
25 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
26 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
27 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
28 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
29 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
30 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
31 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
32 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
33 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
34 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
35 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
36 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
37 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
38 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
39 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
40 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
41 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
42 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
43 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
44 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
45 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
46 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
47 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
48 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
49 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
50 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
51 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
52 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
53 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
54 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
55 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
56 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
57 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
58 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
59 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
60 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
61 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
62 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
63 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
64 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
65 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
66 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
67 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
70 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
71 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
72 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
73 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
74 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
75 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
76 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
77 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
78 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
79 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
82 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
83 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
86 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
87 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
88 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
89 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
104 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
108 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
109 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
110 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
111 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
112 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
113 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
114 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
115 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
116 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
117 2643221548 Streptomyces sp. Root55 Isolate Unclassified
118 2643221578 Streptomyces sp. Root63 Isolate Unclassified
119 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
120 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
121 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
122 2643221670 Streptomyces sp. Root431 Isolate Unclassified
123 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
124 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
125 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
126 2808606448 Streptomyces sp. 193411 Isolate Unclassified
127 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
128 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
129 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
130 2867428634 Streptomyces sp. RP5T Isolate Unclassified
131 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
132 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
133 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
134 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
135 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
136 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
137 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
138 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
139 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
140 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
141 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
142 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
143 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
144 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
145 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
146 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
147 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.77
Metatranscriptomes 0.49
Isolates 17.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.46
Nodule 0
Rhizoplane 0
Rhizosphere 83.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10014246 3300003322 Bacteria 1815
2 rootL2_10149529 3300003322 Bacteria 2597
3 rootH1_10015662 3300003323 Bacteria 1581
4 Ga0068855_100253613 3300005563 Bacteria 1962
5 Ga0105246_10001954 3300011119 Bacteria 12419
6 Ga0157369_10187899 3300013105 Bacteria 2172
7 Ga0183367_1009 3300015688 Bacteria 484598
8 Ga0206353_12000711 3300020082 Bacteria 1737
9 Ga0207647_10171926 3300025904 Bacteria 1261
10 Ga0207667_10243418 3300025949 Bacteria 1840
11 Ga0307517_10012336 3300028786 Bacteria 11741
12 Ga0307515_10005600 3300028794 Bacteria 25385
13 Ga0307511_10008073 3300030521 Bacteria 10543
14 Ga0307509_10026722 3300031507 Bacteria 6432
15 Ga0307509_10033207 3300031507 Bacteria 5680
16 Ga0307508_10143133 3300031616 Bacteria 1995
17 Ga0307516_10043952 3300031730 Bacteria 4424
18 Ga0307413_10135251 3300031824 Bacteria 1694
19 Ga0307410_10241398 3300031852 Bacteria 1400
20 Ga0307507_10028416 3300033179 Bacteria 5962
21 Ga0307507_10035594 3300033179 Bacteria 5111
22 Ga0307510_10007657 3300033180 Bacteria 12876
23 Ga0307510_10146426 3300033180 Bacteria 1992
24 Ga0395900_0250593 3300037418 Bacteria 1772
25 Ga0395898_0003321 3300037466 Bacteria 18066
26 Ga0395905_0074419 3300037471 Bacteria 3183
27 Ga0395901_0111620 3300038443 Bacteria 2871
28 Ga0395901_0347985 3300038443 Bacteria 1530
29 Ga0466972_0006064 3300044658 Bacteria 6071
30 Ga0466965_0002048 3300044683 Bacteria 8441
31 Ga0466961_0001695 3300044693 Bacteria 13723
32 Ga0466961_0171777 3300044693 Bacteria 1348
33 Ga0466964_0138689 3300044706 Bacteria 1115
34 Ga0466971_0000510 3300044719 Bacteria 15306
35 Ga0466970_0001024 3300044765 Bacteria 13489
36 Ga0466970_0033602 3300044765 Bacteria 2711
37 Ga0466957_0001191 3300044842 Bacteria 13529
38 Ga0466960_0019256 3300044901 Bacteria 3004
39 Ga0466959_0005245 3300045049 Bacteria 8846
40 Ga0466958_0010050 3300045836 Bacteria 5289
41 Ga0466967_0004151 3300045976 Bacteria 9690
42 Ga0466967_0004188 3300045976 Bacteria 9661
43 Ga0466967_0050462 3300045976 Bacteria 3643
44 Ga0495592_0045830 3300046454 Bacteria 3261
45 Ga0495603_0001075 3300046455 Bacteria 15819
46 Ga0495603_0011115 3300046455 Bacteria 5457
47 Ga0495603_0014685 3300046455 Bacteria 4734
48 Ga0495629_0004479 3300046459 Bacteria 10464
49 Ga0495629_0019408 3300046459 Bacteria 4855
50 Ga0495629_0021984 3300046459 Bacteria 4550
51 Ga0495651_0003010 3300046462 Bacteria 13011
52 Ga0495651_0122304 3300046462 Bacteria 1910
53 Ga0495651_0280843 3300046462 Bacteria 1125
54 Ga0495580_0220731 3300046472 Bacteria 1303
55 Ga0495582_0014773 3300046473 Bacteria 4290
56 Ga0495664_0000649 3300046477 Bacteria 17706
57 Ga0495585_0043049 3300046492 Bacteria 2527
58 Ga0495594_0000363 3300046499 Bacteria 22776
59 Ga0495583_0045891 3300046506 Bacteria 2018
60 Ga0495606_0013408 3300046507 Bacteria 6474
61 Ga0495608_0117100 3300046511 Bacteria 1710
62 Ga0495616_0019023 3300046513 Bacteria 3754
63 Ga0495618_0015272 3300046514 Bacteria 4686
64 Ga0495620_0003127 3300046515 Bacteria 9512
65 Ga0495628_0163899 3300046516 Bacteria 1688
66 Ga0495628_0194736 3300046516 Bacteria 1529
67 Ga0495631_0021316 3300046518 Bacteria 3017
68 Ga0495643_0031659 3300046522 Bacteria 2942
69 Ga0495666_0100950 3300046526 Bacteria 1359
70 Ga0495652_0019070 3300046529 Bacteria 6110
71 Ga0495652_0055349 3300046529 Bacteria 3374
72 Ga0495640_0009893 3300046533 Bacteria 7397
73 Ga0495640_0031941 3300046533 Bacteria 3754
74 Ga0495587_0041245 3300046536 Bacteria 2754
75 Ga0495609_0088685 3300046538 Bacteria 1346
76 Ga0495597_0018697 3300046542 Bacteria 3249
77 Ga0495633_0112790 3300046558 Bacteria 1260
78 Ga0495668_0009645 3300046616 Bacteria 5907
79 Ga0495634_0005500 3300046642 Bacteria 9737
80 Ga0495634_0020917 3300046642 Bacteria 4634
81 Ga0495611_0077528 3300046648 Bacteria 1524
82 Ga0495635_0001411 3300046663 Bacteria 16016
83 Ga0495661_0011532 3300046665 Bacteria 5994
84 Ga0495588_0012138 3300046674 Bacteria 4061
85 Ga0495657_0003277 3300046675 Bacteria 13288
86 Ga0495657_0014657 3300046675 Bacteria 5754
87 Ga0495657_0061898 3300046675 Bacteria 2475
88 Ga0495646_0003405 3300046680 Bacteria 9880
89 Ga0495613_0000795 3300046689 Bacteria 24569
90 Ga0495613_0002803 3300046689 Bacteria 13081
91 Ga0495624_0179646 3300046690 Bacteria 1290
92 Ga0495670_0025052 3300046691 Bacteria 2951
93 Ga0495671_0001819 3300046692 Bacteria 13738
94 Ga0495649_0041890 3300046694 Bacteria 2503
95 Ga0495649_0073031 3300046694 Bacteria 1838
96 Ga0495589_0009738 3300046794 Bacteria 4992
97 Ga0495589_0043724 3300046794 Bacteria 2228
98 Ga0495589_0102213 3300046794 Bacteria 1386
99 Ga0495600_0004517 3300046809 Bacteria 8336
100 Ga0495600_0024350 3300046809 Bacteria 3896
101 Ga0495581_0007540 3300047315 Bacteria 6292
102 Ga0495581_0014643 3300047315 Bacteria 4547
103 Ga0495581_0110478 3300047315 Bacteria 1599
104 Ga0495604_0000793 3300047317 Bacteria 26564
105 Ga0495604_0087482 3300047317 Bacteria 2321
106 Ga0495636_0027445 3300047318 Bacteria 2319
107 Ga0495636_0047642 3300047318 Bacteria 1790
108 Ga0495636_0122519 3300047318 Bacteria 1151
109 Ga0495674_0124395 3300047319 Bacteria 2177
110 Ga0495676_0004478 3300047321 Bacteria 12771
111 Ga0495676_0005875 3300047321 Bacteria 11264
112 Ga0495676_0013750 3300047321 Bacteria 7258
113 Ga0495676_0080715 3300047321 Bacteria 2469
114 Ga0495680_0033435 3300047322 Bacteria 4163
115 Ga0495687_001165 3300047443 Bacteria 25402
116 Ga0495687_002539 3300047443 Bacteria 14465
117 Ga0495687_030148 3300047443 Bacteria 2500
118 Ga0495685_004683 3300047447 Bacteria 4436
119 Ga0495685_009024 3300047447 Bacteria 3324
120 Ga0495685_011500 3300047447 Bacteria 2987
121 Ga0495685_021831 3300047447 Bacteria 2203
122 Ga0495681_0002877 3300047470 Bacteria 12167
123 Ga0495684_0272563 3300047471 Bacteria 1224
124 Ga0495686_0070410 3300047472 Bacteria 2155
125 Ga0495593_0001968 3300047673 Bacteria 12235
126 Ga0495593_0037174 3300047673 Bacteria 2635
127 Ga0495602_0021244 3300048088 Bacteria 6396
128 Ga0495614_0002599 3300048089 Bacteria 8028
129 Ga0495614_0003383 3300048089 Bacteria 7136
130 Ga0495614_0077622 3300048089 Bacteria 1436
131 Ga0495626_0011826 3300048091 Bacteria 4597
132 Ga0501032_0058182 3300049569 Bacteria 2595
133 Ga0501032_0188086 3300049569 Bacteria 1350
134 Ga0501033_0000846 3300049570 Bacteria 27929
135 Ga0501033_0060689 3300049570 Bacteria 2789
136 Ga0501034_0005018 3300049571 Bacteria 14546
137 Ga0501034_0019143 3300049571 Bacteria 7009
138 Ga0501034_0099578 3300049571 Bacteria 2901
139 Ga0501036_0000351 3300049572 Bacteria 32415
140 Ga0501036_0049985 3300049572 Bacteria 3541
141 Ga0501037_0020977 3300049573 Bacteria 4827
142 Ga0501038_0002224 3300049574 Bacteria 18056
143 Ga0501038_0019676 3300049574 Bacteria 6078
144 Ga0501038_0116564 3300049574 Bacteria 2207
145 Ga0501039_0003826 3300049575 Bacteria 11302
146 Ga0501043_0001639 3300049579 Bacteria 19455
147 Ga0501043_0031220 3300049579 Bacteria 4188
148 Ga0501046_0014560 3300049580 Bacteria 6629
149 Ga0501047_0093869 3300049581 Bacteria 2879
150 Ga0501047_0230790 3300049581 Bacteria 1704
151 Ga0501048_0054392 3300049582 Bacteria 2843
152 Ga0501068_0081964 3300049584 Bacteria 1981
153 Ga0501070_0009495 3300049586 Bacteria 8223
154 Ga0501073_0055429 3300049589 Bacteria 2774
155 Ga0501074_0063952 3300049590 Bacteria 2649
156 Ga0501074_0159059 3300049590 Bacteria 1613
157 Ga0501035_0000524 3300049822 Bacteria 43227
158 Ga0501035_0016857 3300049822 Bacteria 6735
159 Ga0501035_0113136 3300049822 Bacteria 2378
160 Ga0501044_0008837 3300049823 Bacteria 11019
161 Ga0501044_0098676 3300049823 Bacteria 2940
162 Ga0501044_0334987 3300049823 Bacteria 1435
163 nmdc:mga07m45_136049_c1 3300050496 Bacteria 1422
164 Ga0500644_0076393 3300053088 Bacteria 1220
165 Ga0500560_007894 3300053107 Bacteria 2533
166 Ga0500600_0102286 3300053149 Bacteria 1509
167 Ga0500624_005929 3300053157 Bacteria 1641
168 2585299818 2582581312 Bacteria 7308206
169 2558907935 2558860112 Bacteria 9931328
170 2585306859 2582581313 Bacteria 10042643
171 2616694339 2616644814 Bacteria 11555299
172 2616899485 2616644941 Bacteria 8510691
173 2643759362 2643221548 Bacteria 8053412
174 2643897430 2643221578 Bacteria 9213798
175 2643945102 2643221587 Bacteria 7586415
176 2644014557 2643221601 Bacteria 7493239
177 2644175994 2643221631 Bacteria 8168043
178 2644387334 2643221670 Bacteria 6497041
179 2644408574 2643221673 Bacteria 9196637
180 2644432001 2643221677 Bacteria 7584031
181 2644463222 2643221682 Bacteria 6743283
182 2809231012 2808606448 Bacteria 8656184
183 2819694062 2818991463 Bacteria 7948711
184 2862182893 2862178590 Bacteria 8583590
185 2862290922 2862290372 Bacteria 7471434
186 2867435595 2867428634 Bacteria 9590268
187 2875393374 2875391855 Bacteria 7600475
188 2912721582 2912715099 Bacteria 9460473
189 2912725429 2912723979 Bacteria 8557534
190 2918503246 2918501144 Bacteria 8668083
191 2946051318 2946045630 Bacteria 8527308
192 2954717538 2954711539 Bacteria 10867210
193 2954727502 2954721474 Bacteria 10456478
194 2954734299 2954731030 Bacteria 10243860
195 2954746398 2954740390 Bacteria 10229294
196 2954753182 2954749733 Bacteria 10366972
197 2954765513 2954759201 Bacteria 9358192
198 2966603686 2966598605 Bacteria 7676064
199 3006396087 3006393351 Bacteria 6615579
200 3006495602 3006493962 Bacteria 8825450
201 8023627449 8023623736 Bacteria 8593882
202 8025482100 8025478263 Bacteria 8209203
203 8056836486 8056829672 Bacteria 9045328
204 rootL2_10014246
205 rootL2_10149529
206 rootH1_10015662
207 Ga0068855_100253613
208 Ga0105246_10001954
209 Ga0157369_10187899
210 Ga0183367_1009
211 Ga0206353_12000711
212 Ga0207647_10171926
213 Ga0207667_10243418
214 Ga0307517_10012336
215 Ga0307515_10005600
216 Ga0307511_10008073
217 Ga0307509_10026722
218 Ga0307509_10033207
219 Ga0307508_10143133
220 Ga0307516_10043952
221 Ga0307413_10135251
222 Ga0307410_10241398
223 Ga0307507_10028416
224 Ga0307507_10035594
225 Ga0307510_10007657
226 Ga0307510_10146426
227 Ga0395900_0250593
228 Ga0395898_0003321
229 Ga0395905_0074419
230 Ga0395901_0111620
231 Ga0395901_0347985
232 Ga0466972_0006064
233 Ga0466965_0002048
234 Ga0466961_0001695
235 Ga0466961_0171777
236 Ga0466964_0138689
237 Ga0466971_0000510
238 Ga0466970_0001024
239 Ga0466970_0033602
240 Ga0466957_0001191
241 Ga0466960_0019256
242 Ga0466959_0005245
243 Ga0466958_0010050
244 Ga0466967_0004151
245 Ga0466967_0004188
246 Ga0466967_0050462
247 Ga0495592_0045830
248 Ga0495603_0001075
249 Ga0495603_0011115
250 Ga0495603_0014685
251 Ga0495629_0004479
252 Ga0495629_0019408
253 Ga0495629_0021984
254 Ga0495651_0003010
255 Ga0495651_0122304
256 Ga0495651_0280843
257 Ga0495580_0220731
258 Ga0495582_0014773
259 Ga0495664_0000649
260 Ga0495585_0043049
261 Ga0495594_0000363
262 Ga0495583_0045891
263 Ga0495606_0013408
264 Ga0495608_0117100
265 Ga0495616_0019023
266 Ga0495618_0015272
267 Ga0495620_0003127
268 Ga0495628_0163899
269 Ga0495628_0194736
270 Ga0495631_0021316
271 Ga0495643_0031659
272 Ga0495666_0100950
273 Ga0495652_0019070
274 Ga0495652_0055349
275 Ga0495640_0009893
276 Ga0495640_0031941
277 Ga0495587_0041245
278 Ga0495609_0088685
279 Ga0495597_0018697
280 Ga0495633_0112790
281 Ga0495668_0009645
282 Ga0495634_0005500
283 Ga0495634_0020917
284 Ga0495611_0077528
285 Ga0495635_0001411
286 Ga0495661_0011532
287 Ga0495588_0012138
288 Ga0495657_0003277
289 Ga0495657_0014657
290 Ga0495657_0061898
291 Ga0495646_0003405
292 Ga0495613_0000795
293 Ga0495613_0002803
294 Ga0495624_0179646
295 Ga0495670_0025052
296 Ga0495671_0001819
297 Ga0495649_0041890
298 Ga0495649_0073031
299 Ga0495589_0009738
300 Ga0495589_0043724
301 Ga0495589_0102213
302 Ga0495600_0004517
303 Ga0495600_0024350
304 Ga0495581_0007540
305 Ga0495581_0014643
306 Ga0495581_0110478
307 Ga0495604_0000793
308 Ga0495604_0087482
309 Ga0495636_0027445
310 Ga0495636_0047642
311 Ga0495636_0122519
312 Ga0495674_0124395
313 Ga0495676_0004478
314 Ga0495676_0005875
315 Ga0495676_0013750
316 Ga0495676_0080715
317 Ga0495680_0033435
318 Ga0495687_001165
319 Ga0495687_002539
320 Ga0495687_030148
321 Ga0495685_004683
322 Ga0495685_009024
323 Ga0495685_011500
324 Ga0495685_021831
325 Ga0495681_0002877
326 Ga0495684_0272563
327 Ga0495686_0070410
328 Ga0495593_0001968
329 Ga0495593_0037174
330 Ga0495602_0021244
331 Ga0495614_0002599
332 Ga0495614_0003383
333 Ga0495614_0077622
334 Ga0495626_0011826
335 Ga0501032_0058182
336 Ga0501032_0188086
337 Ga0501033_0000846
338 Ga0501033_0060689
339 Ga0501034_0005018
340 Ga0501034_0019143
341 Ga0501034_0099578
342 Ga0501036_0000351
343 Ga0501036_0049985
344 Ga0501037_0020977
345 Ga0501038_0002224
346 Ga0501038_0019676
347 Ga0501038_0116564
348 Ga0501039_0003826
349 Ga0501043_0001639
350 Ga0501043_0031220
351 Ga0501046_0014560
352 Ga0501047_0093869
353 Ga0501047_0230790
354 Ga0501048_0054392
355 Ga0501068_0081964
356 Ga0501070_0009495
357 Ga0501073_0055429
358 Ga0501074_0063952
359 Ga0501074_0159059
360 Ga0501035_0000524
361 Ga0501035_0016857
362 Ga0501035_0113136
363 Ga0501044_0008837
364 Ga0501044_0098676
365 Ga0501044_0334987
366 nmdc:mga07m45_136049_c1
367 Ga0500644_0076393
368 Ga0500560_007894
369 Ga0500600_0102286
370 Ga0500624_005929
371 2585299818
372 2558907935
373 2585306859
374 2616694339
375 2616899485
376 2643759362
377 2643897430
378 2643945102
379 2644014557
380 2644175994
381 2644387334
382 2644408574
383 2644432001
384 2644463222
385 2809231012
386 2819694062
387 2862182893
388 2862290922
389 2867435595
390 2875393374
391 2912721582
392 2912725429
393 2918503246
394 2946051318
395 2954717538
396 2954727502
397 2954734299
398 2954746398
399 2954753182
400 2954765513
401 2966603686
402 3006396087
403 3006495602
404 8023627449
405 8025482100
406 8056836486

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13365

Trypsin_2

Trypsin-like peptidase domain

106

250

0.96

PF13180

PDZ_2

PDZ domain

298

380

0.93

PF17820

PDZ_6

PDZ domain

316

369

0.89

PF00595

PDZ

PDZ domain

288

368

0.83

PF00089

Trypsin

Trypsin

83

280

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
8f0a-assembly1.cif.gz_D client-bound structure of a degp trimer within a 12mer cage 0.908 256 333
4fgm-assembly1.cif.gz_A crystal structure of the aminopeptidase n family protein q5qty1 from idiomarina loihiensis. northeast structural genomics consortium target ilr60. 0.9004 249 338
2qgr-assembly1.cif.gz_A structure of the r178a mutant of delta pdz degs protease 0.8963 53 243
3i1e-assembly2.cif.gz_B crystal structure of the pdz domain of the sdrc-like protein (lin2157) from listeria innocua, northeast structural genomics consortium target lkr136c 0.8942 269 335
3sti-assembly1.cif.gz_B crystal structure of the protease domain of degq from escherichia coli 0.8914 54 243
ID Description Score Start End Superfamily
af_Q4D0I1_345_430_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9502 253 312 2.30.42.10
1y8tB01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9406 53 135 2.40.10.10
af_F1QL69_2_87_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9306 269 335 2.30.42.10
2z9iA03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.93 250 339 2.30.42.10
3gdvC03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9295 250 338 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A7S1NPY3-F1-model_v4 PDZ domain-containing protein 0.9567 253 337
AF-A0A518DW85-F1-model_v4 PDZ domain-containing protein 0.9566 250 339
AF-A0A0S8DD09-F1-model_v4 PDZ domain-containing protein 0.9511 253 337
AF-A0A3M1R1Q3-F1-model_v4 PDZ domain-containing protein 0.9494 250 336
AF-A0A2G2KLC0-F1-model_v4 deleted 0.9471 249 338

Map