F311751

General Info

Members Datasets Scaffolds Average Seq Length
203 128 406 205

Family's Representative Sequence

Representative Sequence 3300049574|Ga0501038_0730112|Ga0501038_0730112_11_676
Length 221
Sequence MLQVDILKIKFQVSKMFKKTKNIDTAFRHVRLFSIAFLAGCIIISVMIAYKSYQLATQSQQRIFILANGKALEAYAADRKDNIPVEARDHVKMFHHYFFTMDPDDKVIQSNITKALYLADGSAKQQYDNLKENGYYTNLISGNISQEIQADSIMINTENYPFYFRYKGQQKIIRPTTIVTRSLITEGYLRNVSRSDNNSHGFLIERWRTLENKDINIQNRN

Samples

Sample ID Description Type Environment
1 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
109 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
110 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
111 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
119 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
124 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
125 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
126 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
127 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
128 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.54
Metatranscriptomes 0
Isolates 2.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.46
Nodule 0
Rhizoplane 0
Rhizosphere 83.25
Stem 0
Stem Tuber 0
Unclassified 17.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501038_0730112 3300049574 Unclassified 740
2 SwRhRL2b_contig_844519 2162886007 Bacteria 7391
3 MRS1b_contig_5300343 2162886011 Bacteria 956
4 JGI24740J21852_10000174 3300001979 Bacteria 25728
5 JGI24739J22299_10001500 3300001989 Bacteria 8815
6 JGI25157J39369_1009528 3300002741 Bacteria 1306
7 rootH1_10040517 3300003316 Bacteria 4523
8 rootH1_10110233 3300003316 Unclassified 1571
9 rootH2_10002202 3300003320 Bacteria 120052
10 rootH2_10018000 3300003320 Bacteria 30779
11 rootL2_10023680 3300003322 Bacteria 10039
12 rootL2_10175845 3300003322 Unclassified 1759
13 rootL2_10251718 3300003322 Bacteria 3861
14 rootL2_10273695 3300003322 Bacteria 2256
15 rootH1_10011104 3300003323 Bacteria 21531
16 rootH1_10234539 3300003323 Bacteria 3114
17 rootH1_10260591 3300003323 Unclassified 1848
18 rootH1_10299876 3300003323 Bacteria 1637
19 rootH1_10324583 3300003323 Unclassified 1060
20 rootH1_10331281 3300003323 Bacteria 1246
21 rootH1_10364249 3300003323 Bacteria 2568
22 Ga0055531_10000077 3300003794 Bacteria 106111
23 Ga0065714_10201999 3300005288 Bacteria 892
24 Ga0065704_10000221 3300005289 Bacteria 134976
25 Ga0065712_10081757 3300005290 Bacteria 2978
26 Ga0065712_10251611 3300005290 Bacteria 958
27 Ga0070683_100008526 3300005329 Bacteria 8711
28 Ga0070683_100373245 3300005329 Bacteria 1359
29 Ga0070683_100384699 3300005329 Bacteria 1337
30 Ga0068869_100037175 3300005334 Bacteria 3461
31 Ga0070666_10000550 3300005335 Bacteria 22666
32 Ga0070691_10334978 3300005341 Bacteria 836
33 Ga0070668_100087219 3300005347 Bacteria 2455
34 Ga0070673_100017954 3300005364 Bacteria 5044
35 Ga0070673_100283426 3300005364 Unclassified 1454
36 Ga0070688_100148624 3300005365 Bacteria 1599
37 Ga0070688_100700814 3300005365 Bacteria 784
38 Ga0070659_100000403 3300005366 Bacteria 32763
39 Ga0070659_100752933 3300005366 Unclassified 845
40 Ga0070667_100324403 3300005367 Unclassified 1390
41 Ga0070667_100501109 3300005367 Bacteria 1113
42 Ga0070663_100600093 3300005455 Bacteria 926
43 Ga0070685_10411608 3300005466 Bacteria 939
44 Ga0070679_100745419 3300005530 Unclassified 922
45 Ga0068853_100054602 3300005539 Bacteria 3443
46 Ga0070672_100029689 3300005543 Bacteria 4103
47 Ga0070665_100818659 3300005548 Bacteria 944
48 Ga0070665_100987298 3300005548 Unclassified 854
49 Ga0070664_100202385 3300005564 Bacteria 1772
50 Ga0068852_100679819 3300005616 Unclassified 1038
51 Ga0068859_100001479 3300005617 Bacteria 23884
52 Ga0068859_100058794 3300005617 Bacteria 3873
53 Ga0068859_101345381 3300005617 Bacteria 787
54 Ga0068864_100013620 3300005618 Bacteria 6742
55 Ga0068864_100048598 3300005618 Bacteria 3647
56 Ga0068861_100728226 3300005719 Bacteria 924
57 Ga0068851_10188528 3300005834 Unclassified 1145
58 Ga0068851_10419192 3300005834 Bacteria 790
59 Ga0068863_100000100 3300005841 Bacteria 94010
60 Ga0068863_100023180 3300005841 Bacteria 5932
61 Ga0068863_100071892 3300005841 Bacteria 3273
62 Ga0068863_100077403 3300005841 Bacteria 3148
63 Ga0068863_100167162 3300005841 Bacteria 2109
64 Ga0068863_100537627 3300005841 Unclassified 1153
65 Ga0068858_100001555 3300005842 Bacteria 23526
66 Ga0068858_100175761 3300005842 Bacteria 2020
67 Ga0068860_100007951 3300005843 Bacteria 10579
68 Ga0068860_100059920 3300005843 Bacteria 3618
69 Ga0068862_100086293 3300005844 Bacteria 2728
70 Ga0081539_10061426 3300005985 Bacteria 2058
71 Ga0070715_10005716 3300006163 Bacteria 4173
72 Ga0097621_100073320 3300006237 Bacteria 2834
73 Ga0097621_100177914 3300006237 Bacteria 1837
74 Ga0097620_100001480 3300006931 Bacteria 23884
75 Ga0097620_100058795 3300006931 Bacteria 3873
76 Ga0097620_101345519 3300006931 Bacteria 787
77 Ga0105240_10014376 3300009093 Bacteria 10809
78 Ga0111539_10178666 3300009094 Bacteria 2479
79 Ga0114129_10453544 3300009147 Unclassified 1681
80 Ga0105241_10002035 3300009174 Bacteria 15294
81 Ga0105241_10581601 3300009174 Bacteria 1009
82 Ga0105242_10105539 3300009176 Bacteria 2393
83 Ga0105237_10000848 3300009545 Bacteria 41643
84 Ga0105237_10136794 3300009545 Bacteria 2444
85 Ga0105237_10142605 3300009545 Bacteria 2390
86 Ga0105237_10173788 3300009545 Bacteria 2154
87 Ga0105249_10027183 3300009553 Bacteria 5161
88 Ga0105249_10029443 3300009553 Bacteria 4959
89 Ga0105249_10047178 3300009553 Bacteria 3925
90 Ga0105239_10611668 3300010375 Bacteria 1243
91 Ga0105246_10008448 3300011119 Bacteria 6328
92 Ga0157373_10000299 3300013100 Bacteria 40111
93 Ga0157373_10006387 3300013100 Bacteria 8808
94 Ga0157373_10053737 3300013100 Bacteria 2864
95 Ga0157371_10000192 3300013102 Bacteria 90362
96 Ga0157370_10003767 3300013104 Bacteria 17702
97 Ga0157370_10099712 3300013104 Bacteria 2722
98 Ga0157369_10000004 3300013105 Bacteria 479764
99 Ga0157369_10004846 3300013105 Bacteria 15792
100 Ga0157374_10307851 3300013296 Bacteria 1568
101 Ga0163162_10000419 3300013306 Bacteria 39110
102 Ga0163162_10412943 3300013306 Bacteria 1482
103 Ga0157372_10006559 3300013307 Bacteria 12382
104 Ga0157372_10006685 3300013307 Bacteria 12266
105 Ga0157372_10049700 3300013307 Bacteria 4664
106 Ga0157372_10613521 3300013307 Bacteria 1268
107 Ga0157372_11070052 3300013307 Unclassified 933
108 Ga0163163_10216012 3300014325 Bacteria 1966
109 Ga0163163_10288069 3300014325 Unclassified 1694
110 Ga0163163_10545965 3300014325 Unclassified 1221
111 Ga0157380_10051556 3300014326 Bacteria 3255
112 Ga0157380_10181530 3300014326 Bacteria 1849
113 Ga0157379_10025879 3300014968 Bacteria 5217
114 Ga0157376_10048908 3300014969 Bacteria 3500
115 Ga0163161_10120258 3300017792 Bacteria 1973
116 Ga0209026_1000684 3300025250 Bacteria 20431
117 Ga0209026_1000912 3300025250 Bacteria 15143
118 Ga0209026_1002947 3300025250 Bacteria 5937
119 Ga0209233_1016028 3300025261 Unclassified 2072
120 Ga0209758_1002149 3300025297 Bacteria 20731
121 Ga0209257_1000007 3300025304 Bacteria 1564415
122 Ga0207656_10130274 3300025321 Unclassified 1178
123 Ga0207710_10075919 3300025900 Bacteria 1549
124 Ga0207680_10000324 3300025903 Bacteria 22888
125 Ga0207685_10002585 3300025905 Bacteria 4186
126 Ga0207695_10005841 3300025913 Bacteria 16173
127 Ga0207671_10000157 3300025914 Bacteria 105839
128 Ga0207671_10346875 3300025914 Unclassified 1177
129 Ga0207671_10607820 3300025914 Bacteria 871
130 Ga0207652_10274243 3300025921 Bacteria 1521
131 Ga0207690_10000218 3300025932 Bacteria 43701
132 Ga0207686_10198311 3300025934 Bacteria 1436
133 Ga0207670_10148496 3300025936 Unclassified 1736
134 Ga0207691_10102452 3300025940 Bacteria 2553
135 Ga0207689_10630264 3300025942 Bacteria 903
136 Ga0207661_10019375 3300025944 Bacteria 5072
137 Ga0207661_10286174 3300025944 Bacteria 1474
138 Ga0207661_10329813 3300025944 Bacteria 1373
139 Ga0207651_10037448 3300025960 Bacteria 3178
140 Ga0207651_10262915 3300025960 Bacteria 1418
141 Ga0207712_10227738 3300025961 Bacteria 1494
142 Ga0207658_10499521 3300025986 Unclassified 1083
143 Ga0207677_11142435 3300026023 Bacteria 711
144 Ga0207703_10002085 3300026035 Bacteria 17576
145 Ga0207703_10151629 3300026035 Bacteria 2022
146 Ga0207708_10029457 3300026075 Bacteria 4162
147 Ga0207641_10000013 3300026088 Bacteria 341378
148 Ga0207641_10000426 3300026088 Bacteria 48936
149 Ga0207641_10024198 3300026088 Bacteria 5006
150 Ga0207641_10057484 3300026088 Bacteria 3308
151 Ga0207641_10145599 3300026088 Bacteria 2142
152 Ga0207641_10155228 3300026088 Bacteria 2076
153 Ga0207641_10433051 3300026088 Unclassified 1268
154 Ga0207698_10142110 3300026142 Unclassified 2070
155 Ga0207698_10556777 3300026142 Unclassified 1125
156 Ga0268266_10554784 3300028379 Unclassified 1101
157 Ga0268265_10093594 3300028380 Bacteria 2408
158 Ga0268264_10010883 3300028381 Bacteria 7517
159 Ga0268264_10128517 3300028381 Bacteria 2243
160 Ga0268264_10145030 3300028381 Unclassified 2122
161 Ga0307515_10000001 3300028794 Bacteria 4259510
162 Ga0307515_10000203 3300028794 Bacteria 145242
163 Ga0307515_10000408 3300028794 Bacteria 103931
164 Ga0265327_10036228 3300031251 Bacteria 2715
165 Ga0307513_10309110 3300031456 Unclassified 1344
166 Ga0307509_10027726 3300031507 Bacteria 6300
167 Ga0307408_100001340 3300031548 Bacteria 18454
168 Ga0307408_100122483 3300031548 Bacteria 2017
169 Ga0307508_10359574 3300031616 Bacteria 1047
170 Ga0307516_10174049 3300031730 Bacteria 1891
171 Ga0307516_10231789 3300031730 Unclassified 1550
172 Ga0307406_10258539 3300031901 Unclassified 1316
173 Ga0307412_10018099 3300031911 Bacteria 4231
174 Ga0307412_10213002 3300031911 Bacteria 1476
175 Ga0307416_100117638 3300032002 Bacteria 2360
176 Ga0307510_10031768 3300033180 Bacteria 5957
177 Ga0395899_0000033 3300037312 Bacteria 306589
178 Ga0466957_0010262 3300044842 Bacteria 5368
179 Ga0466957_0019904 3300044842 Plasmid 3950
180 Ga0495638_0000001 3300046460 Bacteria 1114121
181 Ga0495651_0532925 3300046462 Unclassified 748
182 Ga0495585_0074215 3300046492 Unclassified 1851
183 Ga0495643_0031182 3300046522 Bacteria 2969
184 Ga0495648_0020098 3300046524 Bacteria 4672
185 Ga0495648_0034717 3300046524 Bacteria 3279
186 Ga0495609_0100958 3300046538 Bacteria 1250
187 Ga0495668_0000003 3300046616 Bacteria 695023
188 Ga0495625_0279195 3300046660 Bacteria 1075
189 Ga0495687_034428 3300047443 Bacteria 2289
190 Ga0501300_039947 3300049523 Unclassified 705
191 Ga0501034_0001371 3300049571 Bacteria 32769
192 Ga0501043_0058600 3300049579 Bacteria 3023
193 Ga0501235_071767 3300049669 Unclassified 820
194 Ga0501225_0000168 3300049705 Bacteria 19910
195 Ga0501035_0375778 3300049822 Unclassified 1186
196 nmdc:mga05p37_375587_c1 3300050507 Unclassified 1667
197 nmdc:mga0n895_1008234_c1 3300050512 Bacteria 813
198 Ga0500583_0017838 3300053092 Bacteria 2871
199 2586206845 2585427687 Bacteria 5544917
200 2895502721 2895498888 Bacteria 5283788
201 2904785305 2904780799 Bacteria 5840761
202 2919439071 2919437846 Bacteria 6199444
203 2929926699 2929921140 Bacteria 8649150
204 Ga0501038_0730112
205 SwRhRL2b_contig_844519
206 MRS1b_contig_5300343
207 JGI24740J21852_10000174
208 JGI24739J22299_10001500
209 JGI25157J39369_1009528
210 rootH1_10040517
211 rootH1_10110233
212 rootH2_10002202
213 rootH2_10018000
214 rootL2_10023680
215 rootL2_10175845
216 rootL2_10251718
217 rootL2_10273695
218 rootH1_10011104
219 rootH1_10234539
220 rootH1_10260591
221 rootH1_10299876
222 rootH1_10324583
223 rootH1_10331281
224 rootH1_10364249
225 Ga0055531_10000077
226 Ga0065714_10201999
227 Ga0065704_10000221
228 Ga0065712_10081757
229 Ga0065712_10251611
230 Ga0070683_100008526
231 Ga0070683_100373245
232 Ga0070683_100384699
233 Ga0068869_100037175
234 Ga0070666_10000550
235 Ga0070691_10334978
236 Ga0070668_100087219
237 Ga0070673_100017954
238 Ga0070673_100283426
239 Ga0070688_100148624
240 Ga0070688_100700814
241 Ga0070659_100000403
242 Ga0070659_100752933
243 Ga0070667_100324403
244 Ga0070667_100501109
245 Ga0070663_100600093
246 Ga0070685_10411608
247 Ga0070679_100745419
248 Ga0068853_100054602
249 Ga0070672_100029689
250 Ga0070665_100818659
251 Ga0070665_100987298
252 Ga0070664_100202385
253 Ga0068852_100679819
254 Ga0068859_100001479
255 Ga0068859_100058794
256 Ga0068859_101345381
257 Ga0068864_100013620
258 Ga0068864_100048598
259 Ga0068861_100728226
260 Ga0068851_10188528
261 Ga0068851_10419192
262 Ga0068863_100000100
263 Ga0068863_100023180
264 Ga0068863_100071892
265 Ga0068863_100077403
266 Ga0068863_100167162
267 Ga0068863_100537627
268 Ga0068858_100001555
269 Ga0068858_100175761
270 Ga0068860_100007951
271 Ga0068860_100059920
272 Ga0068862_100086293
273 Ga0081539_10061426
274 Ga0070715_10005716
275 Ga0097621_100073320
276 Ga0097621_100177914
277 Ga0097620_100001480
278 Ga0097620_100058795
279 Ga0097620_101345519
280 Ga0105240_10014376
281 Ga0111539_10178666
282 Ga0114129_10453544
283 Ga0105241_10002035
284 Ga0105241_10581601
285 Ga0105242_10105539
286 Ga0105237_10000848
287 Ga0105237_10136794
288 Ga0105237_10142605
289 Ga0105237_10173788
290 Ga0105249_10027183
291 Ga0105249_10029443
292 Ga0105249_10047178
293 Ga0105239_10611668
294 Ga0105246_10008448
295 Ga0157373_10000299
296 Ga0157373_10006387
297 Ga0157373_10053737
298 Ga0157371_10000192
299 Ga0157370_10003767
300 Ga0157370_10099712
301 Ga0157369_10000004
302 Ga0157369_10004846
303 Ga0157374_10307851
304 Ga0163162_10000419
305 Ga0163162_10412943
306 Ga0157372_10006559
307 Ga0157372_10006685
308 Ga0157372_10049700
309 Ga0157372_10613521
310 Ga0157372_11070052
311 Ga0163163_10216012
312 Ga0163163_10288069
313 Ga0163163_10545965
314 Ga0157380_10051556
315 Ga0157380_10181530
316 Ga0157379_10025879
317 Ga0157376_10048908
318 Ga0163161_10120258
319 Ga0209026_1000684
320 Ga0209026_1000912
321 Ga0209026_1002947
322 Ga0209233_1016028
323 Ga0209758_1002149
324 Ga0209257_1000007
325 Ga0207656_10130274
326 Ga0207710_10075919
327 Ga0207680_10000324
328 Ga0207685_10002585
329 Ga0207695_10005841
330 Ga0207671_10000157
331 Ga0207671_10346875
332 Ga0207671_10607820
333 Ga0207652_10274243
334 Ga0207690_10000218
335 Ga0207686_10198311
336 Ga0207670_10148496
337 Ga0207691_10102452
338 Ga0207689_10630264
339 Ga0207661_10019375
340 Ga0207661_10286174
341 Ga0207661_10329813
342 Ga0207651_10037448
343 Ga0207651_10262915
344 Ga0207712_10227738
345 Ga0207658_10499521
346 Ga0207677_11142435
347 Ga0207703_10002085
348 Ga0207703_10151629
349 Ga0207708_10029457
350 Ga0207641_10000013
351 Ga0207641_10000426
352 Ga0207641_10024198
353 Ga0207641_10057484
354 Ga0207641_10145599
355 Ga0207641_10155228
356 Ga0207641_10433051
357 Ga0207698_10142110
358 Ga0207698_10556777
359 Ga0268266_10554784
360 Ga0268265_10093594
361 Ga0268264_10010883
362 Ga0268264_10128517
363 Ga0268264_10145030
364 Ga0307515_10000001
365 Ga0307515_10000203
366 Ga0307515_10000408
367 Ga0265327_10036228
368 Ga0307513_10309110
369 Ga0307509_10027726
370 Ga0307408_100001340
371 Ga0307408_100122483
372 Ga0307508_10359574
373 Ga0307516_10174049
374 Ga0307516_10231789
375 Ga0307406_10258539
376 Ga0307412_10018099
377 Ga0307412_10213002
378 Ga0307416_100117638
379 Ga0307510_10031768
380 Ga0395899_0000033
381 Ga0466957_0010262
382 Ga0466957_0019904
383 Ga0495638_0000001
384 Ga0495651_0532925
385 Ga0495585_0074215
386 Ga0495643_0031182
387 Ga0495648_0020098
388 Ga0495648_0034717
389 Ga0495609_0100958
390 Ga0495668_0000003
391 Ga0495625_0279195
392 Ga0495687_034428
393 Ga0501300_039947
394 Ga0501034_0001371
395 Ga0501043_0058600
396 Ga0501235_071767
397 Ga0501225_0000168
398 Ga0501035_0375778
399 nmdc:mga05p37_375587_c1
400 nmdc:mga0n895_1008234_c1
401 Ga0500583_0017838
402 2586206845
403 2895502721
404 2904785305
405 2919439071
406 2929926699

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
2bhm-assembly2.cif.gz_D crystal structure of virb8 from brucella suis 0.7693 69 195
5wip-assembly1.cif.gz_D trae protein in complex with 2-(2-furyl)isonicotinic acid 0.7499 74 195
2bhm-assembly2.cif.gz_D crystal structure of virb8 from brucella suis 0.7334 69 195
4o3v-assembly1.cif.gz_A crystal structure of a virb8-like protein of type iv secretion system from rickettsia typhi 0.732 66 206
3wz4-assembly5.cif.gz_E structure of the periplasmic domain of doti (crystal form i) 0.7284 66 194
ID Description Score Start End Superfamily
af_I6YGA5_49_159_3.10.450.230 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,;VirB8 protein 0.7955 79 193 3.10.450.230
af_O53973_67_188_3.10.450.50 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.779 63 193 3.10.450.50
af_I6YGA5_49_159_3.10.450.230 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,;VirB8 protein 0.7763 79 193 3.10.450.230
af_O53973_67_188_3.10.450.50 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.768 63 193 3.10.450.50
af_P71754_77_184_3.10.450.50 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.7609 85 193 3.10.450.50
ID Description Score Start End GO Terms
AF-A0A519YMU2-F1-model_v4 Conjugative transposon protein TraK 0.9992 71 205
AF-A0A2R7JQB4-F1-model_v4 Conjugative transposon protein TraK 0.9955 85 206
AF-A0A6L3IJB7-F1-model_v4 Conjugative transposon protein TraK 0.9902 65 206
AF-A0A2R7JQB4-F1-model_v4 Conjugative transposon protein TraK 0.9874 85 206
AF-A0A520II25-F1-model_v4 Conjugative transposon protein TraK 0.9869 70 201

Map