F310964

General Info

Members Datasets Scaffolds Average Seq Length
203 126 406 434

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100014534|Ga0070697_1000145344
Length 468
Sequence LKETGNGNCVRFKLAPSPETPATAKTPLLMISPARRAAFEILRRVELERAYASVLLAAMNPGMREDDRALCHELVLGVLRNQLWLDRVMEHFADRDSARIDLPVKLALRVALYQLRFLSRIPPSAAVNESVNLVRAAGLKSAAAFTNAVLRGATRAPDYDPTLNARDAVEMLAIETSHPRWMIERWIHALGFQDASMLARANNKPPSLAFRFTSRSMTSRETLLKDLKSSGVELSQSKILSSAWRLSHVNDVVRRFLNDGLIYFQDEASQFVGHLVDATSEDRVLDVCAAPGSKATQMAASAPGATIVAGDLHLHRLATMKDLAERQGASVQLVAYDAGVSLSLMDCSFDRVLIDAPCSGTGTLRHNPEIRWRLKPSDIEELAKKQRRILANGAATVKRGGRLVYATCSLEPEENEEVIDNFLEGHSEFEMAAAAGPKELCAKTGTIRTWPNYHDTDGFFVAVFERIS

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
103 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
104 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
116 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
117 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
121 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.48
Rhizosphere 98.52
Stem 0
Stem Tuber 0
Unclassified 13.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100014534 3300005536 Bacteria 6183
2 JGI24751J29686_10000094 3300002459 Bacteria 49568
3 JGI24751J29686_10000191 3300002459 Bacteria 27160
4 JGI25406J46586_10004918 3300003203 Bacteria 6205
5 Ga0065704_10007732 3300005289 Bacteria 2411
6 Ga0065712_10018184 3300005290 Unclassified 2375
7 Ga0065712_10094954 3300005290 Bacteria 2235
8 Ga0065707_10090149 3300005295 Bacteria 4179
9 Ga0070670_100001494 3300005331 Bacteria 18832
10 Ga0068869_100004883 3300005334 Bacteria 8389
11 Ga0068869_100064361 3300005334 Bacteria 2697
12 Ga0070666_10023120 3300005335 Unclassified 4043
13 Ga0070680_100000479 3300005336 Bacteria 27447
14 Ga0070682_100000196 3300005337 Bacteria 45226
15 Ga0070687_100043128 3300005343 Bacteria 2290
16 Ga0070669_100016066 3300005353 Bacteria 5340
17 Ga0070669_100061225 3300005353 Unclassified 2765
18 Ga0070671_100003653 3300005355 Bacteria 12046
19 Ga0070673_100063467 3300005364 Unclassified 2939
20 Ga0070688_100040539 3300005365 Bacteria 2854
21 Ga0070667_100026446 3300005367 Bacteria 4827
22 Ga0070701_10045793 3300005438 Unclassified 2246
23 Ga0070701_10071599 3300005438 Bacteria 1855
24 Ga0070700_100018039 3300005441 Bacteria 4050
25 Ga0070708_100073674 3300005445 Bacteria 3078
26 Ga0070708_100315117 3300005445 Bacteria 1474
27 Ga0070681_10001297 3300005458 Bacteria 21805
28 Ga0070681_10079283 3300005458 Unclassified 3240
29 Ga0070706_100162083 3300005467 Unclassified 2088
30 Ga0070707_100088399 3300005468 Bacteria 2997
31 Ga0070698_100000512 3300005471 Bacteria 41226
32 Ga0070698_100013489 3300005471 Bacteria 8650
33 Ga0070698_100088811 3300005471 Bacteria 3075
34 Ga0070699_100067534 3300005518 Bacteria 3105
35 Ga0070699_100068876 3300005518 Bacteria 3074
36 Ga0070679_100000167 3300005530 Bacteria 53124
37 Ga0070697_100123734 3300005536 Bacteria 2165
38 Ga0070697_100158983 3300005536 Unclassified 1908
39 Ga0068853_100002773 3300005539 Bacteria 13241
40 Ga0070686_100025058 3300005544 Bacteria 3583
41 Ga0070695_100026580 3300005545 Bacteria 3582
42 Ga0070695_100027862 3300005545 Bacteria 3503
43 Ga0070696_100068767 3300005546 Bacteria 2487
44 Ga0068855_100173879 3300005563 Bacteria 2438
45 Ga0068854_100089132 3300005578 Bacteria 2292
46 Ga0070702_100004721 3300005615 Bacteria 6257
47 Ga0068852_100231401 3300005616 Bacteria 1762
48 Ga0068852_100243001 3300005616 Unclassified 1721
49 Ga0068859_100005953 3300005617 Bacteria 12380
50 Ga0068859_100014831 3300005617 Bacteria 7825
51 Ga0068859_100021958 3300005617 Bacteria 6400
52 Ga0068859_100068809 3300005617 Bacteria 3575
53 Ga0068859_100260467 3300005617 Bacteria 1825
54 Ga0068866_10003855 3300005718 Bacteria 6155
55 Ga0068861_100029445 3300005719 Bacteria 4017
56 Ga0068858_100004032 3300005842 Bacteria 14492
57 Ga0068858_100066162 3300005842 Bacteria 3345
58 Ga0068860_100019251 3300005843 Bacteria 6626
59 Ga0068860_100164734 3300005843 Unclassified 2139
60 Ga0068862_100029503 3300005844 Bacteria 4622
61 Ga0068862_100046830 3300005844 Bacteria 3689
62 Ga0068862_100072727 3300005844 Bacteria 2970
63 Ga0068862_100131155 3300005844 Bacteria 2217
64 Ga0081539_10000407 3300005985 Bacteria 91696
65 Ga0081539_10059601 3300005985 Bacteria 2100
66 Ga0070715_10000007 3300006163 Bacteria 192075
67 Ga0070716_100000005 3300006173 Bacteria 273485
68 Ga0097621_100003212 3300006237 Bacteria 11226
69 Ga0097621_100024654 3300006237 Bacteria 4700
70 Ga0097621_100109572 3300006237 Unclassified 2332
71 Ga0075428_100120542 3300006844 Bacteria 2856
72 Ga0075433_10053957 3300006852 Bacteria 3505
73 Ga0068865_100044263 3300006881 Bacteria 3046
74 Ga0097620_100005953 3300006931 Bacteria 12380
75 Ga0097620_100014831 3300006931 Bacteria 7825
76 Ga0097620_100021958 3300006931 Bacteria 6400
77 Ga0097620_100068809 3300006931 Bacteria 3575
78 Ga0097620_100260447 3300006931 Bacteria 1825
79 Ga0105240_10222417 3300009093 Bacteria 2199
80 Ga0111539_10016899 3300009094 Bacteria 9033
81 Ga0111539_10057223 3300009094 Bacteria 4631
82 Ga0111539_10400000 3300009094 Unclassified 1600
83 Ga0105247_10025379 3300009101 Bacteria 3574
84 Ga0105247_10026823 3300009101 Unclassified 3482
85 Ga0114129_10010052 3300009147 Bacteria 13489
86 Ga0114129_10011554 3300009147 Bacteria 12574
87 Ga0114129_10018621 3300009147 Bacteria 9885
88 Ga0114129_10028681 3300009147 Bacteria 7886
89 Ga0114129_10073390 3300009147 Bacteria 4767
90 Ga0114129_10290186 3300009147 Unclassified 2183
91 Ga0114129_10533649 3300009147 Bacteria 1528
92 Ga0105243_10001088 3300009148 Bacteria 24854
93 Ga0105243_10081906 3300009148 Unclassified 2636
94 Ga0105243_10146306 3300009148 Bacteria 2022
95 Ga0105241_10088138 3300009174 Bacteria 2443
96 Ga0105242_10001155 3300009176 Bacteria 20795
97 Ga0105242_10001871 3300009176 Bacteria 16542
98 Ga0105242_10004201 3300009176 Bacteria 11224
99 Ga0105242_10107186 3300009176 Unclassified 2376
100 Ga0105248_10043011 3300009177 Bacteria 5065
101 Ga0105248_10167610 3300009177 Bacteria 2476
102 Ga0105237_10123752 3300009545 Bacteria 2581
103 Ga0105237_10206246 3300009545 Bacteria 1966
104 Ga0105238_10065498 3300009551 Bacteria 3634
105 Ga0105249_10011314 3300009553 Bacteria 7833
106 Ga0105249_10019209 3300009553 Bacteria 6095
107 Ga0105249_10021217 3300009553 Bacteria 5815
108 Ga0105249_10054062 3300009553 Bacteria 3671
109 Ga0105239_10013600 3300010375 Bacteria 9035
110 Ga0105239_10262582 3300010375 Unclassified 1941
111 Ga0157373_10033529 3300013100 Bacteria 3693
112 Ga0157378_10000001 3300013297 Bacteria 352632
113 Ga0157378_10009796 3300013297 Bacteria 8353
114 Ga0163162_10007731 3300013306 Bacteria 10476
115 Ga0163162_10018768 3300013306 Bacteria 6779
116 Ga0163162_10034905 3300013306 Bacteria 5007
117 Ga0163162_10086689 3300013306 Bacteria 3209
118 Ga0157372_10194878 3300013307 Bacteria 2347
119 Ga0157375_10001219 3300013308 Bacteria 22177
120 Ga0157375_10070166 3300013308 Bacteria 3513
121 Ga0157375_10073401 3300013308 Bacteria 3440
122 Ga0163163_10001554 3300014325 Bacteria 19362
123 Ga0163163_10006139 3300014325 Bacteria 10469
124 Ga0163163_10031731 3300014325 Bacteria 5100
125 Ga0163163_10073621 3300014325 Bacteria 3407
126 Ga0163163_10314684 3300014325 Unclassified 1619
127 Ga0157380_10021995 3300014326 Bacteria 4791
128 Ga0157380_10042282 3300014326 Bacteria 3562
129 Ga0157379_10093396 3300014968 Bacteria 2699
130 Ga0163161_10067062 3300017792 Bacteria 2621
131 Ga0207710_10001223 3300025900 Bacteria 13018
132 Ga0207680_10011324 3300025903 Unclassified 4503
133 Ga0207647_10011164 3300025904 Bacteria 6310
134 Ga0207685_10000007 3300025905 Bacteria 278341
135 Ga0207684_10110426 3300025910 Unclassified 2353
136 Ga0207654_10047217 3300025911 Bacteria 2459
137 Ga0207707_10000022 3300025912 Bacteria 198808
138 Ga0207660_10000065 3300025917 Bacteria 55387
139 Ga0207662_10038729 3300025918 Unclassified 2794
140 Ga0207652_10000535 3300025921 Bacteria 38543
141 Ga0207681_10165069 3300025923 Bacteria 1673
142 Ga0207650_10000022 3300025925 Bacteria 318878
143 Ga0207659_10067486 3300025926 Bacteria 2598
144 Ga0207644_10056089 3300025931 Bacteria 2842
145 Ga0207686_10000145 3300025934 Bacteria 55930
146 Ga0207686_10011160 3300025934 Bacteria 4911
147 Ga0207709_10000788 3300025935 Bacteria 24792
148 Ga0207704_10037263 3300025938 Bacteria 2808
149 Ga0207665_10000017 3300025939 Bacteria 130585
150 Ga0207665_10048244 3300025939 Unclassified 2857
151 Ga0207691_10001779 3300025940 Bacteria 21198
152 Ga0207711_10002359 3300025941 Bacteria 16916
153 Ga0207689_10000707 3300025942 Bacteria 31997
154 Ga0207689_10003587 3300025942 Bacteria 14180
155 Ga0207689_10007455 3300025942 Bacteria 9589
156 Ga0207712_10062727 3300025961 Bacteria 2643
157 Ga0207712_10110042 3300025961 Bacteria 2065
158 Ga0207677_10028726 3300026023 Unclassified 3523
159 Ga0207639_10023616 3300026041 Bacteria 4441
160 Ga0207639_10040204 3300026041 Unclassified 3489
161 Ga0207639_10079716 3300026041 Unclassified 2588
162 Ga0207708_10056181 3300026075 Bacteria 3003
163 Ga0207641_10051704 3300026088 Bacteria 3479
164 Ga0207648_10020131 3300026089 Bacteria 6016
165 Ga0207675_100000858 3300026118 Bacteria 30313
166 Ga0207675_100007269 3300026118 Bacteria 10467
167 Ga0207675_100028783 3300026118 Bacteria 5175
168 Ga0207698_10115209 3300026142 Bacteria 2263
169 Ga0207698_10169907 3300026142 Unclassified 1918
170 Ga0207428_10016343 3300027907 Bacteria 6385
171 Ga0268265_10109553 3300028380 Bacteria 2251
172 Ga0268264_10004223 3300028381 Bacteria 12261
173 Ga0268264_10265087 3300028381 Bacteria 1602
174 Ga0268264_10298884 3300028381 Bacteria 1515
175 Ga0265325_10000515 3300031241 Bacteria 28005
176 Ga0265340_10001090 3300031247 Bacteria 15466
177 Ga0265331_10003381 3300031250 Bacteria 10345
178 Ga0265316_10003692 3300031344 Bacteria 15426
179 Ga0265313_10002383 3300031595 Bacteria 16313
180 Ga0265314_10049034 3300031711 Bacteria 2959
181 Ga0307413_10000477 3300031824 Bacteria 13075
182 Ga0307410_10001027 3300031852 Bacteria 12113
183 Ga0307407_10000694 3300031903 Bacteria 10914
184 Ga0307407_10106915 3300031903 Bacteria 1749
185 Ga0307409_100002926 3300031995 Bacteria 9071
186 Ga0307411_10001852 3300032005 Bacteria 8988
187 Ga0307411_10098614 3300032005 Bacteria 2060
188 Ga0451577_0067245 3300042876 Bacteria 3196
189 Ga0453683_0018166 3300044673 Bacteria 4516
190 Ga0495663_0001176 3300046525 Bacteria 8436
191 Ga0495598_0002697 3300046537 Bacteria 3680
192 Ga0495621_0000109 3300046539 Bacteria 17070
193 Ga0496109_0107936 3300048912 Unclassified 2587
194 Ga0496112_0012637 3300048915 Bacteria 7763
195 Ga0496112_0136903 3300048915 Bacteria 2419
196 Ga0501235_013560 3300049669 Bacteria 1794
197 Ga0501283_005126 3300049779 Bacteria 1791
198 nmdc:mga05p37_32151_c1 3300050507 Bacteria 6416
199 nmdc:mga08y16_237664_c1 3300050511 Bacteria 1884
200 nmdc:mga08y16_3412_c1 3300050511 Bacteria 16478
201 nmdc:mga0n895_121318_c1 3300050512 Bacteria 2635
202 nmdc:mga0rr50_241208_c1 3300050513 Bacteria 1498
203 nmdc:mga0a205_148533_c1 3300050515 Bacteria 2244
204 Ga0070697_100014534
205 JGI24751J29686_10000094
206 JGI24751J29686_10000191
207 JGI25406J46586_10004918
208 Ga0065704_10007732
209 Ga0065712_10018184
210 Ga0065712_10094954
211 Ga0065707_10090149
212 Ga0070670_100001494
213 Ga0068869_100004883
214 Ga0068869_100064361
215 Ga0070666_10023120
216 Ga0070680_100000479
217 Ga0070682_100000196
218 Ga0070687_100043128
219 Ga0070669_100016066
220 Ga0070669_100061225
221 Ga0070671_100003653
222 Ga0070673_100063467
223 Ga0070688_100040539
224 Ga0070667_100026446
225 Ga0070701_10045793
226 Ga0070701_10071599
227 Ga0070700_100018039
228 Ga0070708_100073674
229 Ga0070708_100315117
230 Ga0070681_10001297
231 Ga0070681_10079283
232 Ga0070706_100162083
233 Ga0070707_100088399
234 Ga0070698_100000512
235 Ga0070698_100013489
236 Ga0070698_100088811
237 Ga0070699_100067534
238 Ga0070699_100068876
239 Ga0070679_100000167
240 Ga0070697_100123734
241 Ga0070697_100158983
242 Ga0068853_100002773
243 Ga0070686_100025058
244 Ga0070695_100026580
245 Ga0070695_100027862
246 Ga0070696_100068767
247 Ga0068855_100173879
248 Ga0068854_100089132
249 Ga0070702_100004721
250 Ga0068852_100231401
251 Ga0068852_100243001
252 Ga0068859_100005953
253 Ga0068859_100014831
254 Ga0068859_100021958
255 Ga0068859_100068809
256 Ga0068859_100260467
257 Ga0068866_10003855
258 Ga0068861_100029445
259 Ga0068858_100004032
260 Ga0068858_100066162
261 Ga0068860_100019251
262 Ga0068860_100164734
263 Ga0068862_100029503
264 Ga0068862_100046830
265 Ga0068862_100072727
266 Ga0068862_100131155
267 Ga0081539_10000407
268 Ga0081539_10059601
269 Ga0070715_10000007
270 Ga0070716_100000005
271 Ga0097621_100003212
272 Ga0097621_100024654
273 Ga0097621_100109572
274 Ga0075428_100120542
275 Ga0075433_10053957
276 Ga0068865_100044263
277 Ga0097620_100005953
278 Ga0097620_100014831
279 Ga0097620_100021958
280 Ga0097620_100068809
281 Ga0097620_100260447
282 Ga0105240_10222417
283 Ga0111539_10016899
284 Ga0111539_10057223
285 Ga0111539_10400000
286 Ga0105247_10025379
287 Ga0105247_10026823
288 Ga0114129_10010052
289 Ga0114129_10011554
290 Ga0114129_10018621
291 Ga0114129_10028681
292 Ga0114129_10073390
293 Ga0114129_10290186
294 Ga0114129_10533649
295 Ga0105243_10001088
296 Ga0105243_10081906
297 Ga0105243_10146306
298 Ga0105241_10088138
299 Ga0105242_10001155
300 Ga0105242_10001871
301 Ga0105242_10004201
302 Ga0105242_10107186
303 Ga0105248_10043011
304 Ga0105248_10167610
305 Ga0105237_10123752
306 Ga0105237_10206246
307 Ga0105238_10065498
308 Ga0105249_10011314
309 Ga0105249_10019209
310 Ga0105249_10021217
311 Ga0105249_10054062
312 Ga0105239_10013600
313 Ga0105239_10262582
314 Ga0157373_10033529
315 Ga0157378_10000001
316 Ga0157378_10009796
317 Ga0163162_10007731
318 Ga0163162_10018768
319 Ga0163162_10034905
320 Ga0163162_10086689
321 Ga0157372_10194878
322 Ga0157375_10001219
323 Ga0157375_10070166
324 Ga0157375_10073401
325 Ga0163163_10001554
326 Ga0163163_10006139
327 Ga0163163_10031731
328 Ga0163163_10073621
329 Ga0163163_10314684
330 Ga0157380_10021995
331 Ga0157380_10042282
332 Ga0157379_10093396
333 Ga0163161_10067062
334 Ga0207710_10001223
335 Ga0207680_10011324
336 Ga0207647_10011164
337 Ga0207685_10000007
338 Ga0207684_10110426
339 Ga0207654_10047217
340 Ga0207707_10000022
341 Ga0207660_10000065
342 Ga0207662_10038729
343 Ga0207652_10000535
344 Ga0207681_10165069
345 Ga0207650_10000022
346 Ga0207659_10067486
347 Ga0207644_10056089
348 Ga0207686_10000145
349 Ga0207686_10011160
350 Ga0207709_10000788
351 Ga0207704_10037263
352 Ga0207665_10000017
353 Ga0207665_10048244
354 Ga0207691_10001779
355 Ga0207711_10002359
356 Ga0207689_10000707
357 Ga0207689_10003587
358 Ga0207689_10007455
359 Ga0207712_10062727
360 Ga0207712_10110042
361 Ga0207677_10028726
362 Ga0207639_10023616
363 Ga0207639_10040204
364 Ga0207639_10079716
365 Ga0207708_10056181
366 Ga0207641_10051704
367 Ga0207648_10020131
368 Ga0207675_100000858
369 Ga0207675_100007269
370 Ga0207675_100028783
371 Ga0207698_10115209
372 Ga0207698_10169907
373 Ga0207428_10016343
374 Ga0268265_10109553
375 Ga0268264_10004223
376 Ga0268264_10265087
377 Ga0268264_10298884
378 Ga0265325_10000515
379 Ga0265340_10001090
380 Ga0265331_10003381
381 Ga0265316_10003692
382 Ga0265313_10002383
383 Ga0265314_10049034
384 Ga0307413_10000477
385 Ga0307410_10001027
386 Ga0307407_10000694
387 Ga0307407_10106915
388 Ga0307409_100002926
389 Ga0307411_10001852
390 Ga0307411_10098614
391 Ga0451577_0067245
392 Ga0453683_0018166
393 Ga0495663_0001176
394 Ga0495598_0002697
395 Ga0495621_0000109
396 Ga0496109_0107936
397 Ga0496112_0012637
398 Ga0496112_0136903
399 Ga0501235_013560
400 Ga0501283_005126
401 nmdc:mga05p37_32151_c1
402 nmdc:mga08y16_237664_c1
403 nmdc:mga08y16_3412_c1
404 nmdc:mga0n895_121318_c1
405 nmdc:mga0rr50_241208_c1
406 nmdc:mga0a205_148533_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01029

NusB

NusB family

32

155

0.97

PF01189

Methyltr_RsmB-F

16S rRNA methyltransferase RsmB/F

274

465

0.93

PF22458

RsmF-B_ferredox

Methyltr_RsmF/B-like, ferredoxin-like domain

178

253

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8i9y-assembly1.cif.gz_CP cryo-em structure of a chaetomium thermophilum pre-60s ribosomal subunit - ytm1-2 0.9126 144 417
5zvh-assembly2.cif.gz_A the crystal structure of nsun6 from pyrococcus horikoshii with sfg 0.9106 154 417
8esq-assembly1.cif.gz_q ytm1 associated nascent 60s ribosome state 2 0.899 137 417
8i9z-assembly1.cif.gz_CP cryo-em structure of a chaetomium thermophilum pre-60s ribosomal subunit - state spb4 0.8976 144 417
3m4x-assembly1.cif.gz_A structure of a ribosomal methyltransferase 0.896 153 416
ID Description Score Start End Superfamily
af_Q9FG73_345_571_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9428 243 417 3.40.50.150
af_I1N087_295_600_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9427 247 417 3.40.50.150
2yxlA04 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9353 239 417 3.40.50.150
af_P40991_338_614_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9314 249 417 3.40.50.150
af_Q9TYV5_297_615_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9296 247 417 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A2H9M9C0-F1-model_v4 SAM-dependent methyltransferase 0.9752 313 417 GO:0001510
GO:0003723
GO:0008173
AF-A0A2H5W101-F1-model_v4 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) (16S rRNA m5C967 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmB) 0.9663 6 417 GO:0003723
GO:0005737
GO:0006355
GO:0008649
AF-A0A7V9UML1-F1-model_v4 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) (16S rRNA m5C967 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmB) 0.9659 1 343 GO:0003723
GO:0005737
GO:0006355
GO:0008649
AF-A0A3B8KLT1-F1-model_v4 deleted 0.9568 6 133
AF-A0A2H5W101-F1-model_v4 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) (16S rRNA m5C967 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmB) 0.9527 6 417 GO:0003723
GO:0005737
GO:0006355
GO:0008649

Map