F310286

General Info

Members Datasets Scaffolds Average Seq Length
202 134 188 589

Family's Representative Sequence

Representative Sequence 3300046492|Ga0495585_0007348|Ga0495585_0007348_166_2007
Length 613
Sequence MTCFDATNMCFNLTPIPMQLNVSKKIQMKRIAILLTFCFFNTASFCQTTASYKWLDPATAGFPVIEGQAWPAETANTYDRFPARAEKSLNPNVWNISHSSAGLYIKFKTDAPNLVIRYKVKGDLAMSHMPATGVSGVDLYALDPNGKWCLAPGSFTFKDTITYRFSNIQVSKSFPGRSYEYRLFLPLYNSVSWLQVGVPVGNTFNFMPLSKEKPVLVYGTSIAQGACASRPGLAWTALLQRALDRPLINLGFSGSGRLEKSVIDLMAEVDAKIYVLDCMPNLISFPDQEIETRLSASIQGLQEKHPLTPILLVEHSEGNVDGLLDTGRNTDYNRVNKVLNQTYSRLIAAGAKNIYLLTNKEIAFDINSTVDGVHPNDAGMQKYADAYEKAIRVIINEPAGPYSTTLPVVQSRDGYYDWRNRHNEILTLVKTDAPKIVFLGNSILNYWGGTPKAPLARGATSWDKYLQPLGVKNFGFGWDQVENVLWRVYHGELDGFKANKVMIMIGTNNLSINNDQEIIEGLRLLVQAVKVRQPQTQILLSGLLPRRALEKRVGALNKAVAKLAAQTGVRFINPGKIFLNNAGNIDESLFGDGLHPNEVGYQKLAVALVSYLK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
6 2818991444 Filimonas endophytica 3197 Isolate Unclassified
7 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
8 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
9 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
10 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
11 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
12 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
13 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
14 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
15 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
16 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
17 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
23 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
26 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
27 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
28 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
29 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
30 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
37 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
38 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
39 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
40 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
71 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
72 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
105 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
113 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
114 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
115 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
119 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
123 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
124 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
125 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
126 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
127 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
128 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
129 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
130 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
131 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
132 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
133 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
134 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.07
Metatranscriptomes 0
Isolates 6.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.39
Nodule 0
Rhizoplane 0.5
Rhizosphere 80.2
Stem 0
Stem Tuber 0
Unclassified 7.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2682574 2162886007 Bacteria 11840
2 JGI24739J22299_10002735 3300001989 Bacteria 6790
3 rootH1_10100969 3300003316 Bacteria 2699
4 rootH1_10145641 3300003316 Bacteria 3193
5 rootL2_10001477 3300003322 Bacteria 4813
6 rootL2_10001896 3300003322 Bacteria 54565
7 rootH1_10014133 3300003323 Bacteria 17251
8 Ga0055542_1003071 3300003762 Bacteria 4806
9 Ga0065165_1000060 3300005262 Bacteria 180226
10 Ga0065714_10002620 3300005288 Bacteria 30664
11 Ga0065704_10070286 3300005289 Bacteria 39355
12 Ga0065704_10088622 3300005289 Bacteria 2924
13 Ga0070658_10102010 3300005327 Bacteria 2372
14 Ga0070676_10001384 3300005328 Bacteria 12228
15 Ga0070683_100038916 3300005329 Bacteria 4362
16 Ga0068869_100077884 3300005334 Unclassified 2468
17 Ga0070666_10006867 3300005335 Bacteria 7010
18 Ga0070666_10026579 3300005335 Bacteria 3784
19 Ga0070680_100043326 3300005336 Unclassified 3656
20 Ga0070680_100085172 3300005336 Unclassified 2611
21 Ga0068868_100002856 3300005338 Bacteria 11976
22 Ga0068868_100092230 3300005338 Unclassified 2441
23 Ga0070660_100004164 3300005339 Bacteria 9991
24 Ga0070668_100000373 3300005347 Bacteria 29627
25 Ga0070668_100002123 3300005347 Bacteria 14496
26 Ga0070669_100050640 3300005353 Bacteria 3034
27 Ga0070671_100019509 3300005355 Bacteria 5520
28 Ga0070671_100030442 3300005355 Bacteria 4454
29 Ga0070674_100002657 3300005356 Bacteria 9903
30 Ga0070673_100000503 3300005364 Bacteria 20920
31 Ga0070667_100043472 3300005367 Bacteria 3771
32 Ga0070681_10176569 3300005458 Bacteria 2058
33 Ga0068867_100002130 3300005459 Bacteria 13900
34 Ga0068867_100006388 3300005459 Bacteria 8330
35 Ga0070679_100033758 3300005530 Bacteria 5067
36 Ga0070679_100106376 3300005530 Unclassified 2791
37 Ga0068853_100005707 3300005539 Bacteria 9792
38 Ga0068853_100067511 3300005539 Bacteria 3107
39 Ga0070665_100000066 3300005548 Bacteria 212791
40 Ga0070665_100014395 3300005548 Bacteria 7938
41 Ga0068855_100000467 3300005563 Bacteria 49741
42 Ga0068855_100080463 3300005563 Bacteria 3778
43 Ga0068855_100139260 3300005563 Bacteria 2767
44 Ga0068857_100014354 3300005577 Bacteria 6904
45 Ga0068856_100078815 3300005614 Bacteria 3266
46 Ga0068852_100001411 3300005616 Bacteria 16202
47 Ga0068852_100001453 3300005616 Bacteria 15992
48 Ga0068852_100050697 3300005616 Bacteria 3558
49 Ga0068852_100113440 3300005616 Bacteria 2468
50 Ga0068859_100158355 3300005617 Bacteria 2343
51 Ga0068870_10016334 3300005840 Bacteria 3544
52 Ga0068860_100000041 3300005843 Bacteria 227790
53 Ga0068860_100006898 3300005843 Bacteria 11390
54 Ga0068860_100101223 3300005843 Bacteria 2749
55 Ga0068860_100119253 3300005843 Bacteria 2526
56 Ga0068862_100054908 3300005844 Bacteria 3411
57 Ga0075366_10000884 3300006195 Bacteria 14482
58 Ga0097621_100025665 3300006237 Bacteria 4612
59 Ga0068871_100000305 3300006358 Bacteria 34224
60 Ga0068871_100011553 3300006358 Bacteria 6479
61 Ga0068865_100000049 3300006881 Bacteria 65689
62 Ga0068865_100004554 3300006881 Bacteria 8364
63 Ga0097620_100158354 3300006931 Bacteria 2343
64 Ga0105240_10001715 3300009093 Bacteria 36990
65 Ga0105240_10004199 3300009093 Bacteria 22054
66 Ga0105240_10008201 3300009093 Bacteria 14972
67 Ga0105240_10029628 3300009093 Bacteria 7126
68 Ga0105240_10101988 3300009093 Bacteria 3488
69 Ga0105241_10000591 3300009174 Bacteria 27316
70 Ga0105241_10015931 3300009174 Bacteria 5508
71 Ga0105241_10019026 3300009174 Bacteria 5063
72 Ga0105241_10033762 3300009174 Bacteria 3842
73 Ga0105242_10012108 3300009176 Bacteria 6636
74 Ga0105237_10000849 3300009545 Bacteria 41632
75 Ga0105237_10001602 3300009545 Bacteria 29373
76 Ga0105237_10003251 3300009545 Bacteria 19429
77 Ga0105237_10006791 3300009545 Bacteria 12620
78 Ga0105237_10100701 3300009545 Unclassified 2881
79 Ga0105239_10028204 3300010375 Bacteria 6176
80 Ga0105239_10056679 3300010375 Bacteria 4298
81 Ga0105239_10104947 3300010375 Bacteria 3129
82 Ga0105239_10114296 3300010375 Unclassified 2994
83 Ga0157373_10000496 3300013100 Bacteria 31139
84 Ga0157373_10106524 3300013100 Bacteria 1971
85 Ga0157371_10001816 3300013102 Bacteria 21541
86 Ga0157371_10002119 3300013102 Bacteria 19325
87 Ga0157371_10004102 3300013102 Bacteria 12867
88 Ga0157370_10044788 3300013104 Bacteria 4249
89 Ga0157369_10006899 3300013105 Bacteria 13107
90 Ga0157369_10014778 3300013105 Bacteria 8808
91 Ga0157374_10002821 3300013296 Bacteria 14572
92 Ga0157378_10015678 3300013297 Bacteria 6636
93 Ga0157378_10150069 3300013297 Bacteria 2171
94 Ga0163162_10000263 3300013306 Bacteria 47808
95 Ga0157372_10014617 3300013307 Bacteria 8397
96 Ga0157372_10169950 3300013307 Bacteria 2522
97 Ga0157375_10069752 3300013308 Bacteria 3522
98 Ga0182008_10000009 3300014497 Bacteria 331416
99 Ga0182006_1001856 3300015261 Bacteria 12118
100 Ga0209258_100356 3300025242 Bacteria 62716
101 Ga0209148_1000129 3300025254 Bacteria 175720
102 Ga0209676_1000351 3300025292 Bacteria 87135
103 Ga0207426_1000392 3300025302 Bacteria 74841
104 Ga0207645_10000658 3300025907 Bacteria 28657
105 Ga0207645_10001073 3300025907 Bacteria 22592
106 Ga0207643_10030869 3300025908 Bacteria 2985
107 Ga0207643_10031262 3300025908 Bacteria 2967
108 Ga0207705_10007966 3300025909 Bacteria 7772
109 Ga0207654_10030228 3300025911 Bacteria 2972
110 Ga0207707_10008228 3300025912 Bacteria 9054
111 Ga0207695_10010872 3300025913 Bacteria 11083
112 Ga0207695_10020618 3300025913 Bacteria 7546
113 Ga0207695_10023077 3300025913 Bacteria 7042
114 Ga0207695_10025242 3300025913 Bacteria 6658
115 Ga0207695_10094894 3300025913 Bacteria 2989
116 Ga0207671_10000814 3300025914 Bacteria 39446
117 Ga0207671_10003560 3300025914 Bacteria 15436
118 Ga0207671_10006406 3300025914 Bacteria 10488
119 Ga0207671_10007522 3300025914 Bacteria 9442
120 Ga0207671_10026633 3300025914 Bacteria 4331
121 Ga0207657_10002311 3300025919 Bacteria 20667
122 Ga0207657_10061353 3300025919 Bacteria 3224
123 Ga0207652_10002629 3300025921 Bacteria 15081
124 Ga0207644_10007577 3300025931 Bacteria 7077
125 Ga0207669_10025328 3300025937 Bacteria 3204
126 Ga0207704_10000057 3300025938 Bacteria 78383
127 Ga0207691_10020153 3300025940 Bacteria 6307
128 Ga0207689_10001147 3300025942 Bacteria 25519
129 Ga0207689_10040390 3300025942 Unclassified 3861
130 Ga0207689_10060880 3300025942 Bacteria 3104
131 Ga0207667_10001153 3300025949 Bacteria 33238
132 Ga0207667_10005333 3300025949 Bacteria 15670
133 Ga0207658_10074167 3300025986 Bacteria 2585
134 Ga0207677_10039456 3300026023 Bacteria 3105
135 Ga0207702_10090569 3300026078 Bacteria 2676
136 Ga0207648_10000356 3300026089 Bacteria 50430
137 Ga0207648_10003125 3300026089 Bacteria 17481
138 Ga0207674_10012528 3300026116 Bacteria 9474
139 Ga0207674_10035652 3300026116 Bacteria 5192
140 Ga0207698_10009062 3300026142 Bacteria 6321
141 Ga0207698_10033229 3300026142 Unclassified 3746
142 Ga0207698_10068525 3300026142 Bacteria 2802
143 Ga0268266_10000010 3300028379 Bacteria 1030233
144 Ga0268266_10032929 3300028379 Unclassified 4405
145 Ga0268264_10000252 3300028381 Bacteria 99533
146 Ga0307517_10067666 3300028786 Bacteria 3266
147 Ga0307515_10004651 3300028794 Bacteria 28175
148 Ga0307515_10006611 3300028794 Bacteria 23131
149 Ga0307412_10000084 3300031911 Bacteria 90908
150 Ga0307414_10025368 3300032004 Bacteria 3796
151 Ga0495638_0010115 3300046460 Bacteria 6570
152 Ga0495650_0000110 3300046471 Bacteria 198355
153 Ga0495585_0000136 3300046492 Bacteria 79721
154 Ga0495585_0007348 3300046492 Bacteria 6752
155 Ga0495606_0000002 3300046507 Bacteria 554637
156 Ga0495610_0005699 3300046512 Bacteria 8778
157 Ga0495648_0001386 3300046524 Bacteria 23862
158 Ga0495633_0000043 3300046558 Bacteria 172356
159 Ga0495668_0000073 3300046616 Bacteria 166105
160 Ga0495625_0000013 3300046660 Bacteria 345151
161 Ga0495625_0002630 3300046660 Bacteria 19183
162 Ga0495625_0006296 3300046660 Bacteria 10614
163 Ga0495625_0040484 3300046660 Bacteria 3398
164 Ga0495661_0011937 3300046665 Bacteria 5879
165 Ga0495658_0038581 3300046683 Bacteria 2646
166 Ga0495649_0000010 3300046694 Bacteria 430552
167 Ga0495687_000035 3300047443 Bacteria 255949
168 Ga0501043_0039774 3300049579 Bacteria 3696
169 Ga0501047_0038321 3300049581 Bacteria 4638
170 Ga0501070_0078377 3300049586 Bacteria 2734
171 Ga0501071_0050846 3300049587 Unclassified 2986
172 Ga0501035_0092705 3300049822 Bacteria 2658
173 nmdc:mga0k408_53_c1 3300050493 Bacteria 57877
174 Ga0500578_0000001 3300053086 Bacteria 317120
175 Ga0500644_0000105 3300053088 Bacteria 53242
176 Ga0500651_0000591 3300053093 Bacteria 18214
177 Ga0500562_000131 3300053108 Bacteria 23538
178 Ga0500607_035388 3300053121 Bacteria 2731
179 Ga0500608_000508 3300053122 Bacteria 14533
180 Ga0500618_000010 3300053125 Bacteria 203909
181 Ga0500658_0003208 3300053134 Bacteria 6225
182 Ga0500616_0009369 3300053153 Bacteria 5963
183 Ga0500622_0001658 3300053156 Bacteria 17415
184 Ga0500622_0001853 3300053156 Bacteria 15995
185 Ga0500622_0027175 3300053156 Bacteria 3017
186 Ga0500633_0000926 3300053160 Bacteria 5132
187 Ga0500636_0031676 3300053177 Bacteria 3129
188 Ga0500645_001466 3300053730 Bacteria 11857

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053730 Ga0500645_001466 Ga0500645_001466_10377_11837 478
2 3300025908 Ga0207643_10031262 Ga0207643_100312622 479
3 3300049587 Ga0501071_0050846 Ga0501071_0050846_12_1502 491
4 3300046683 Ga0495658_0038581 Ga0495658_0038581_1094_2629 505
5 3300049581 Ga0501047_0038321 Ga0501047_0038321_2474_4093 530
6 3300053108 Ga0500562_000131 Ga0500562_000131_12430_14124 548
7 iso_pu_bacteria 2945977869 2945984156 556
8 3300053156 Ga0500622_0001658 Ga0500622_0001658_3607_5349 563
9 3300053086 Ga0500578_0000001 Ga0500578_0000001_46165_47898 564
10 iso_pu_bacteria 2818991444 2819589456 564
11 3300003316 rootH1_10145641 rootH1_101456413 567
12 3300003322 rootL2_10001896 rootL2_1000189610 567
13 3300003323 rootH1_10014133 rootH1_1001413313 567
14 3300053156 Ga0500622_0001853 Ga0500622_0001853_3724_5478 568
15 3300005616 Ga0068852_100113440 Ga0068852_1001134401 571
16 3300010375 Ga0105239_10104947 Ga0105239_101049472 571
17 3300025913 Ga0207695_10025242 Ga0207695_100252426 571
18 3300026142 Ga0207698_10068525 Ga0207698_100685252 571
19 3300046660 Ga0495625_0006296 Ga0495625_0006296_8232_10064 571
20 iso_pu_bacteria 2929239360 2929245239 573
21 3300013105 Ga0157369_10006899 Ga0157369_100068994 576
22 3300005355 Ga0070671_100030442 Ga0070671_1000304422 577
23 3300013102 Ga0157371_10001816 Ga0157371_1000181618 577
24 iso_pu_bacteria 2919437846 2919441765 577
25 3300005530 Ga0070679_100033758 Ga0070679_1000337582 578
26 3300005539 Ga0068853_100067511 Ga0068853_1000675112 578
27 3300005614 Ga0068856_100078815 Ga0068856_1000788153 578
28 3300053088 Ga0500644_0000105 Ga0500644_0000105_9389_11128 578
29 3300053121 Ga0500607_035388 Ga0500607_035388_969_2708 578
30 3300053160 Ga0500633_0000926 Ga0500633_0000926_1172_2911 578
31 3300003762 Ga0055542_1003071 Ga0055542_10030712 579
32 3300005329 Ga0070683_100038916 Ga0070683_1000389161 579
33 3300005336 Ga0070680_100085172 Ga0070680_1000851721 579
34 3300005339 Ga0070660_100004164 Ga0070660_1000041642 579
35 3300005458 Ga0070681_10176569 Ga0070681_101765691 579
36 3300005843 Ga0068860_100000041 Ga0068860_10000004120 579
37 3300009093 Ga0105240_10001715 Ga0105240_1000171511 579
38 3300009174 Ga0105241_10019026 Ga0105241_100190262 579
39 3300025242 Ga0209258_100356 Ga0209258_10035619 579
40 3300025254 Ga0209148_1000129 Ga0209148_100012973 579
41 3300025913 Ga0207695_10023077 Ga0207695_100230775 579
42 3300025914 Ga0207671_10006406 Ga0207671_100064065 579
43 3300025919 Ga0207657_10002311 Ga0207657_100023117 579
44 3300026116 Ga0207674_10035652 Ga0207674_100356522 579
45 3300028381 Ga0268264_10000252 Ga0268264_1000025260 579
46 3300046492 Ga0495585_0007348 Ga0495585_0007348_166_2007 579
47 3300046558 Ga0495633_0000043 Ga0495633_0000043_124200_125987 579
48 3300046616 Ga0495668_0000073 Ga0495668_0000073_15708_17468 579
49 3300053125 Ga0500618_000010 Ga0500618_000010_131633_133393 579
50 3300053134 Ga0500658_0003208 Ga0500658_0003208_3998_5740 579
51 3300053153 Ga0500616_0009369 Ga0500616_0009369_282_2024 579
52 iso_pu_bacteria 2522125168 2522548268 579
53 iso_pu_bacteria 2599185184 2599480925 579
54 iso_pu_bacteria 2883068021 2883069027 579
55 iso_pu_bacteria 2928078545 2928080844 579
56 iso_pu_bacteria 2928147474 2928151064 579
57 3300006195 Ga0075366_10000884 Ga0075366_100008842 580
58 3300028794 Ga0307515_10004651 Ga0307515_100046515 580
59 3300028794 Ga0307515_10006611 Ga0307515_1000661111 580
60 3300046660 Ga0495625_0002630 Ga0495625_0002630_9322_11139 580
61 3300050493 nmdc:mga0k408_53_c1 nmdc:mga0k408_53_c1_44748_46511 580
62 3300003322 rootL2_10001477 rootL2_100014773 581
63 3300005334 Ga0068869_100077884 Ga0068869_1000778842 581
64 3300005548 Ga0070665_100000066 Ga0070665_100000066126 581
65 3300005577 Ga0068857_100014354 Ga0068857_1000143544 581
66 3300005616 Ga0068852_100001453 Ga0068852_1000014535 581
67 3300009093 Ga0105240_10008201 Ga0105240_100082014 581
68 3300009093 Ga0105240_10029628 Ga0105240_100296282 581
69 3300009093 Ga0105240_10101988 Ga0105240_101019883 581
70 3300009545 Ga0105237_10001602 Ga0105237_1000160214 581
71 3300010375 Ga0105239_10114296 Ga0105239_101142961 581
72 3300013104 Ga0157370_10044788 Ga0157370_100447882 581
73 3300013105 Ga0157369_10014778 Ga0157369_100147782 581
74 3300013307 Ga0157372_10169950 Ga0157372_101699502 581
75 3300025913 Ga0207695_10010872 Ga0207695_100108722 581
76 3300025913 Ga0207695_10094894 Ga0207695_100948943 581
77 3300025914 Ga0207671_10003560 Ga0207671_100035604 581
78 3300025942 Ga0207689_10040390 Ga0207689_100403901 581
79 3300025949 Ga0207667_10005333 Ga0207667_1000533312 581
80 3300026023 Ga0207677_10039456 Ga0207677_100394563 581
81 3300026078 Ga0207702_10090569 Ga0207702_100905691 581
82 3300026116 Ga0207674_10012528 Ga0207674_100125286 581
83 3300028379 Ga0268266_10000010 Ga0268266_1000001047 581
84 3300046460 Ga0495638_0010115 Ga0495638_0010115_454_2232 581
85 3300046524 Ga0495648_0001386 Ga0495648_0001386_14394_16172 581
86 3300046660 Ga0495625_0040484 Ga0495625_0040484_1296_3074 581
87 3300047443 Ga0495687_000035 Ga0495687_000035_79820_81598 581
88 3300049822 Ga0501035_0092705 Ga0501035_0092705_50_1828 581
89 3300053156 Ga0500622_0027175 Ga0500622_0027175_287_2065 581
90 3300053177 Ga0500636_0031676 Ga0500636_0031676_257_2035 581
91 iso_pu_bacteria 2818991460 2819679129 581
92 iso_pu_bacteria 2929177148 2929181758 581
93 iso_pu_bacteria 2946013367 2946016451 581
94 3300001989 JGI24739J22299_10002735 JGI24739J22299_100027355 582
95 3300003316 rootH1_10100969 rootH1_101009692 582
96 3300005262 Ga0065165_1000060 Ga0065165_100006095 582
97 3300005338 Ga0068868_100092230 Ga0068868_1000922303 582
98 3300009545 Ga0105237_10006791 Ga0105237_100067916 582
99 3300013102 Ga0157371_10004102 Ga0157371_100041028 582
100 3300013306 Ga0163162_10000263 Ga0163162_100002636 582
101 3300025292 Ga0209676_1000351 Ga0209676_100035128 582
102 3300025914 Ga0207671_10007522 Ga0207671_100075225 582
103 3300046471 Ga0495650_0000110 Ga0495650_0000110_140869_142638 582
104 3300046507 Ga0495606_0000002 Ga0495606_0000002_449236_451005 582
105 3300046512 Ga0495610_0005699 Ga0495610_0005699_6850_8619 582
106 3300046660 Ga0495625_0000013 Ga0495625_0000013_50557_52326 582
107 3300046665 Ga0495661_0011937 Ga0495661_0011937_2321_4090 582
108 3300046694 Ga0495649_0000010 Ga0495649_0000010_292736_294505 582
109 iso_pu_bacteria 2738541284 2738762817 582
110 3300005563 Ga0068855_100000467 Ga0068855_10000046735 583
111 3300013297 Ga0157378_10015678 Ga0157378_100156782 583
112 3300025949 Ga0207667_10001153 Ga0207667_1000115322 583
113 3300046492 Ga0495585_0000136 Ga0495585_0000136_38523_40295 583
114 3300049579 Ga0501043_0039774 Ga0501043_0039774_505_2286 583
115 3300005335 Ga0070666_10026579 Ga0070666_100265791 584
116 3300005336 Ga0070680_100043326 Ga0070680_1000433262 584
117 3300005353 Ga0070669_100050640 Ga0070669_1000506402 584
118 3300005530 Ga0070679_100106376 Ga0070679_1001063762 584
119 3300005563 Ga0068855_100080463 Ga0068855_1000804633 584
120 3300005843 Ga0068860_100006898 Ga0068860_10000689811 584
121 3300005844 Ga0068862_100054908 Ga0068862_1000549082 584
122 3300009174 Ga0105241_10000591 Ga0105241_100005911 584
123 3300009545 Ga0105237_10100701 Ga0105237_101007012 584
124 3300010375 Ga0105239_10056679 Ga0105239_100566792 584
125 3300013297 Ga0157378_10150069 Ga0157378_101500691 584
126 3300013307 Ga0157372_10014617 Ga0157372_100146175 584
127 3300025302 Ga0207426_1000392 Ga0207426_100039221 584
128 3300025911 Ga0207654_10030228 Ga0207654_100302282 584
129 3300025912 Ga0207707_10008228 Ga0207707_100082288 584
130 3300025942 Ga0207689_10060880 Ga0207689_100608802 584
131 3300049586 Ga0501070_0078377 Ga0501070_0078377_588_2363 584
132 3300005289 Ga0065704_10088622 Ga0065704_100886222 585
133 3300005327 Ga0070658_10102010 Ga0070658_101020101 585
134 3300005328 Ga0070676_10001384 Ga0070676_100013845 585
135 3300005335 Ga0070666_10006867 Ga0070666_100068673 585
136 3300005338 Ga0068868_100002856 Ga0068868_10000285610 585
137 3300005347 Ga0070668_100000373 Ga0070668_10000037318 585
138 3300005347 Ga0070668_100002123 Ga0070668_1000021232 585
139 3300005355 Ga0070671_100019509 Ga0070671_1000195093 585
140 3300005356 Ga0070674_100002657 Ga0070674_1000026577 585
141 3300005364 Ga0070673_100000503 Ga0070673_10000050317 585
142 3300005367 Ga0070667_100043472 Ga0070667_1000434722 585
143 3300005459 Ga0068867_100002130 Ga0068867_1000021303 585
144 3300005459 Ga0068867_100006388 Ga0068867_1000063885 585
145 3300005539 Ga0068853_100005707 Ga0068853_1000057078 585
146 3300005548 Ga0070665_100014395 Ga0070665_1000143952 585
147 3300005563 Ga0068855_100139260 Ga0068855_1001392603 585
148 3300005616 Ga0068852_100001411 Ga0068852_1000014114 585
149 3300005616 Ga0068852_100050697 Ga0068852_1000506971 585
150 3300005617 Ga0068859_100158355 Ga0068859_1001583552 585
151 3300005840 Ga0068870_10016334 Ga0068870_100163342 585
152 3300005843 Ga0068860_100101223 Ga0068860_1001012232 585
153 3300005843 Ga0068860_100119253 Ga0068860_1001192532 585
154 3300006237 Ga0097621_100025665 Ga0097621_1000256652 585
155 3300006358 Ga0068871_100000305 Ga0068871_10000030515 585
156 3300006358 Ga0068871_100011553 Ga0068871_1000115532 585
157 3300006881 Ga0068865_100000049 Ga0068865_10000004955 585
158 3300006881 Ga0068865_100004554 Ga0068865_1000045543 585
159 3300006931 Ga0097620_100158354 Ga0097620_1001583542 585
160 3300009093 Ga0105240_10004199 Ga0105240_1000419911 585
161 3300009174 Ga0105241_10015931 Ga0105241_100159312 585
162 3300009174 Ga0105241_10033762 Ga0105241_100337623 585
163 3300009176 Ga0105242_10012108 Ga0105242_100121083 585
164 3300009545 Ga0105237_10000849 Ga0105237_1000084910 585
165 3300009545 Ga0105237_10003251 Ga0105237_1000325117 585
166 3300010375 Ga0105239_10028204 Ga0105239_100282042 585
167 3300013100 Ga0157373_10106524 Ga0157373_101065241 585
168 3300013296 Ga0157374_10002821 Ga0157374_1000282112 585
169 3300013308 Ga0157375_10069752 Ga0157375_100697522 585
170 3300025907 Ga0207645_10000658 Ga0207645_1000065817 585
171 3300025907 Ga0207645_10001073 Ga0207645_100010739 585
172 3300025908 Ga0207643_10030869 Ga0207643_100308692 585
173 3300025909 Ga0207705_10007966 Ga0207705_100079661 585
174 3300025913 Ga0207695_10020618 Ga0207695_100206184 585
175 3300025914 Ga0207671_10000814 Ga0207671_1000081421 585
176 3300025914 Ga0207671_10026633 Ga0207671_100266333 585
177 3300025919 Ga0207657_10061353 Ga0207657_100613531 585
178 3300025921 Ga0207652_10002629 Ga0207652_1000262914 585
179 3300025931 Ga0207644_10007577 Ga0207644_100075772 585
180 3300025937 Ga0207669_10025328 Ga0207669_100253282 585
181 3300025938 Ga0207704_10000057 Ga0207704_1000005714 585
182 3300025940 Ga0207691_10020153 Ga0207691_100201532 585
183 3300025942 Ga0207689_10001147 Ga0207689_100011474 585
184 3300025986 Ga0207658_10074167 Ga0207658_100741672 585
185 3300026089 Ga0207648_10000356 Ga0207648_100003569 585
186 3300026089 Ga0207648_10003125 Ga0207648_100031259 585
187 3300026142 Ga0207698_10009062 Ga0207698_100090622 585
188 3300026142 Ga0207698_10033229 Ga0207698_100332291 585
189 3300028379 Ga0268266_10032929 Ga0268266_100329293 585
190 3300028786 Ga0307517_10067666 Ga0307517_100676662 585
191 3300053122 Ga0500608_000508 Ga0500608_000508_3084_4859 585
192 iso_pu_bacteria 2775506987 2776614381 585
193 2162886007 SwRhRL2b_contig_2682574 SwRhRL2b_0519.00006010 586
194 3300005288 Ga0065714_10002620 Ga0065714_1000262015 586
195 3300005289 Ga0065704_10070286 Ga0065704_1007028617 586
196 3300013100 Ga0157373_10000496 Ga0157373_1000049617 586
197 3300013102 Ga0157371_10002119 Ga0157371_100021194 586
198 3300014497 Ga0182008_10000009 Ga0182008_10000009140 586
199 3300015261 Ga0182006_1001856 Ga0182006_10018568 586
200 3300031911 Ga0307412_10000084 Ga0307412_1000008448 586
201 3300032004 Ga0307414_10025368 Ga0307414_100253681 586
202 3300053093 Ga0500651_0000591 Ga0500651_0000591_4013_5773 586

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14606

Lipase_GDSL_3

GDSL-like Lipase/Acylhydrolase family

212

392

0.98

PF14607

GxDLY

N-terminus of Esterase_SGNH_hydro-type

52

204

0.97

PF13472

Lipase_GDSL_2

GDSL-like Lipase/Acylhydrolase family

438

603

0.87

PF00657

Lipase_GDSL

GDSL-like Lipase/Acylhydrolase

436

608

0.76

PF13472

Lipase_GDSL_2

GDSL-like Lipase/Acylhydrolase family

217

382

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lhs-assembly1.cif.gz_A-2 crystal structure of a putative gdsl-like lipase (bacova_00914) from bacteroides ovatus atcc 8483 at 1.40 a resolution 0.9279 26 366
4lhs-assembly1.cif.gz_A-2 crystal structure of a putative gdsl-like lipase (bacova_00914) from bacteroides ovatus atcc 8483 at 1.40 a resolution 0.9094 26 366
1es9-assembly1.cif.gz_A-2 x-ray crystal structure of r22k mutant of the mammalian brain platelet-activating factor acetylhydrolases (paf-ah) 0.8869 374 585
3dt9-assembly1.cif.gz_A crystal structure of bovin brain platelet activating factor acetylhydrolase covalently inhibited by soman 0.8766 374 585
1wab-assembly1.cif.gz_A platelet-activating factor acetylhydrolase 0.8738 374 585
ID Description Score Start End Superfamily
4lhsA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.9135 183 366 3.40.50.1110
af_O35264_1_229_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8809 374 585 3.40.50.1110
4lhsA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8805 183 366 3.40.50.1110
4lhsA01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8802 26 176 2.60.120.260
af_Q9VXP4_1_222_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8573 377 585 3.40.50.1110
ID Description Score Start End GO Terms
AF-C6Y1Z6-F1-model_v4 Uncharacterized protein 0.9905 25 364
AF-A0A4Q3PCT0-F1-model_v4 deleted 0.9867 444 577
AF-A0A318HTH2-F1-model_v4 Lysophospholipase L1-like esterase 0.9824 26 583 GO:0004622
AF-A0A6M1E9H6-F1-model_v4 Hydrolase 0.982 26 366
AF-A0A4Q5RXW2-F1-model_v4 Acetylhydrolase 0.982 26 316 GO:0016787

Feature Viewer

pLDDT pTM Quality
91.87 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map