F309368
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 202 | 129 | 200 | 290 |
Family's Representative Sequence
| Representative Sequence | 3300005331|Ga0070670_100016514|Ga0070670_1000165144 |
| Length | 317 |
| Sequence | LKGDLKANTNLANHPNLRQSIQMYTPTAKGYFSGCGGMELGIMQAGVNVIQSLDLDIEATQCMEQNKHYFSHSILNIDIKEKTVLEQPKTDIIVGTYPCTKYSPIADIHGTRTGDDLFLHFFRHIAIEKPEMYIVENVPGMKKFKVVMEAMTKLPDYYVNIFCPVDASNWLPQKRKRLILIGTRKLFSISSPSQINNKSRLKDILEKNPQVEMPDYVIKRINGGYRDKPIIVDPGIPNAMAPTCVAHYSKDLSTRLVRDSKAKFGLRPFSIREYARLQGFPDDFHFENKRSSYKLIGNAVPVHMGKWAGSVAMKYFN |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221543 | Paenibacillus sp. Root52 | Isolate | Unclassified |
| 2 | 2818991442 | Chitinophaga pinensis 1204 | Isolate | Unclassified |
| 3 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 4 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 5 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 6 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 7 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 8 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 9 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 11 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 15 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 29 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 30 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 31 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 32 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 35 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 36 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 38 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 39 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 40 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 42 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 84 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 85 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 86 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 87 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 88 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 89 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 90 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 91 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 92 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 93 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 94 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 95 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 96 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 97 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 103 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 104 | 3300049514 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought | Metagenome | Rhizosphere |
| 105 | 3300049515 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought | Metagenome | Rhizosphere |
| 106 | 3300049519 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought | Metagenome | Rhizosphere |
| 107 | 3300049521 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought | Metagenome | Rhizosphere |
| 108 | 3300049522 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control | Metagenome | Rhizosphere |
| 109 | 3300049523 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control | Metagenome | Rhizosphere |
| 110 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049653 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control | Metagenome | Rhizosphere |
| 114 | 3300049654 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control | Metagenome | Rhizosphere |
| 115 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 116 | 3300049665 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought | Metagenome | Rhizosphere |
| 117 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 118 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 119 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 120 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 121 | 3300049707 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought | Metagenome | Rhizosphere |
| 122 | 3300049763 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control | Metagenome | Rhizosphere |
| 123 | 3300049770 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control | Metagenome | Rhizosphere |
| 124 | 3300049779 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought | Metagenome | Rhizosphere |
| 125 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300053727 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.01 |
| Metatranscriptomes | 0 |
| Isolates | 0.99 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.98 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 93.07 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.95 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10007602 | 3300003320 | Bacteria | 27808 |
| 2 | rootH2_10185077 | 3300003320 | Unclassified | 2450 |
| 3 | rootL2_10149080 | 3300003322 | Bacteria | 2729 |
| 4 | rootL2_10187058 | 3300003322 | Bacteria | 1222 |
| 5 | JGI25160J50197_1001227 | 3300003354 | Bacteria | 13012 |
| 6 | Ga0065165_1012159 | 3300005262 | Viruses | 3525 |
| 7 | Ga0065712_10108662 | 3300005290 | Bacteria | 1864 |
| 8 | Ga0065715_10103988 | 3300005293 | Bacteria | 2994 |
| 9 | Ga0070670_100016514 | 3300005331 | Bacteria | 6337 |
| 10 | Ga0068869_100051636 | 3300005334 | Bacteria | 2983 |
| 11 | Ga0068869_100102794 | 3300005334 | Unclassified | 2164 |
| 12 | Ga0070666_10000055 | 3300005335 | Bacteria | 92269 |
| 13 | Ga0070682_100050752 | 3300005337 | Bacteria | 2591 |
| 14 | Ga0070660_100067992 | 3300005339 | Bacteria | 2776 |
| 15 | Ga0070660_100598363 | 3300005339 | Unclassified | 922 |
| 16 | Ga0070689_100150156 | 3300005340 | Bacteria | 1879 |
| 17 | Ga0070675_100190651 | 3300005354 | Bacteria | 1776 |
| 18 | Ga0070671_100027483 | 3300005355 | Unclassified | 4683 |
| 19 | Ga0070700_100000101 | 3300005441 | Bacteria | 53894 |
| 20 | Ga0070694_100012114 | 3300005444 | Bacteria | 5356 |
| 21 | Ga0070694_100048119 | 3300005444 | Unclassified | 2868 |
| 22 | Ga0070694_100257963 | 3300005444 | Bacteria | 1321 |
| 23 | Ga0070708_100003857 | 3300005445 | Bacteria | 11768 |
| 24 | Ga0070685_10028046 | 3300005466 | Bacteria | 3117 |
| 25 | Ga0070706_100224257 | 3300005467 | Bacteria | 1754 |
| 26 | Ga0070706_100228127 | 3300005467 | Bacteria | 1739 |
| 27 | Ga0070707_100086262 | 3300005468 | Bacteria | 3036 |
| 28 | Ga0070707_100356831 | 3300005468 | Bacteria | 1420 |
| 29 | Ga0070698_100022480 | 3300005471 | Bacteria | 6597 |
| 30 | Ga0070698_100098447 | 3300005471 | Bacteria | 2898 |
| 31 | Ga0070698_100400093 | 3300005471 | Bacteria | 1306 |
| 32 | Ga0070699_100038322 | 3300005518 | Bacteria | 4150 |
| 33 | Ga0070697_100001203 | 3300005536 | Bacteria | 19553 |
| 34 | Ga0070697_100002097 | 3300005536 | Bacteria | 15260 |
| 35 | Ga0070697_100147691 | 3300005536 | Bacteria | 1980 |
| 36 | Ga0070697_100321106 | 3300005536 | Bacteria | 1333 |
| 37 | Ga0070697_100474987 | 3300005536 | Bacteria | 1091 |
| 38 | Ga0070704_100153906 | 3300005549 | Unclassified | 1811 |
| 39 | Ga0070702_100003805 | 3300005615 | Bacteria | 6820 |
| 40 | Ga0070702_100369551 | 3300005615 | Bacteria | 1016 |
| 41 | Ga0068852_100040008 | 3300005616 | Bacteria | 3952 |
| 42 | Ga0068852_100045565 | 3300005616 | Bacteria | 3731 |
| 43 | Ga0068852_100069443 | 3300005616 | Bacteria | 3088 |
| 44 | Ga0068852_100117548 | 3300005616 | Bacteria | 2428 |
| 45 | Ga0068852_100435568 | 3300005616 | Bacteria | 1295 |
| 46 | Ga0068859_100190457 | 3300005617 | Bacteria | 2135 |
| 47 | Ga0068864_100011690 | 3300005618 | Bacteria | 7248 |
| 48 | Ga0068864_100036446 | 3300005618 | Bacteria | 4193 |
| 49 | Ga0068864_100045374 | 3300005618 | Bacteria | 3770 |
| 50 | Ga0068864_100056432 | 3300005618 | Bacteria | 3393 |
| 51 | Ga0068870_10037608 | 3300005840 | Bacteria | 2496 |
| 52 | Ga0068863_100007856 | 3300005841 | Bacteria | 10431 |
| 53 | Ga0068863_100034816 | 3300005841 | Bacteria | 4796 |
| 54 | Ga0068858_100075543 | 3300005842 | Bacteria | 3130 |
| 55 | Ga0068858_100187636 | 3300005842 | Unclassified | 1953 |
| 56 | Ga0068858_100267750 | 3300005842 | Unclassified | 1625 |
| 57 | Ga0068860_100025852 | 3300005843 | Bacteria | 5663 |
| 58 | Ga0068860_100091150 | 3300005843 | Bacteria | 2904 |
| 59 | Ga0068860_100150419 | 3300005843 | Bacteria | 2241 |
| 60 | Ga0068862_100161349 | 3300005844 | Bacteria | 2001 |
| 61 | Ga0068862_100206745 | 3300005844 | Bacteria | 1772 |
| 62 | Ga0097621_100072138 | 3300006237 | Bacteria | 2856 |
| 63 | Ga0068871_100024377 | 3300006358 | Bacteria | 4691 |
| 64 | Ga0068871_100274058 | 3300006358 | Unclassified | 1474 |
| 65 | Ga0075434_100112417 | 3300006871 | Bacteria | 2735 |
| 66 | Ga0075436_100000046 | 3300006914 | Bacteria | 74332 |
| 67 | Ga0097620_100190454 | 3300006931 | Bacteria | 2135 |
| 68 | Ga0075435_100012542 | 3300007076 | Bacteria | 6280 |
| 69 | Ga0075435_100035659 | 3300007076 | Bacteria | 3948 |
| 70 | Ga0105247_10194357 | 3300009101 | Unclassified | 1360 |
| 71 | Ga0105243_10000124 | 3300009148 | Bacteria | 87031 |
| 72 | Ga0105243_10001614 | 3300009148 | Bacteria | 19619 |
| 73 | Ga0105242_10000021 | 3300009176 | Bacteria | 115541 |
| 74 | Ga0105242_10002507 | 3300009176 | Bacteria | 14401 |
| 75 | Ga0105242_10042651 | 3300009176 | Bacteria | 3665 |
| 76 | Ga0105242_10193243 | 3300009176 | Bacteria | 1803 |
| 77 | Ga0105237_10010242 | 3300009545 | Bacteria | 9989 |
| 78 | Ga0105238_10007783 | 3300009551 | Bacteria | 10719 |
| 79 | Ga0105249_10055027 | 3300009553 | Bacteria | 3639 |
| 80 | Ga0105249_10060704 | 3300009553 | Bacteria | 3469 |
| 81 | Ga0105249_10232668 | 3300009553 | Bacteria | 1818 |
| 82 | Ga0105239_10162770 | 3300010375 | Bacteria | 2493 |
| 83 | Ga0105246_10004763 | 3300011119 | Bacteria | 8259 |
| 84 | Ga0105246_10008751 | 3300011119 | Bacteria | 6229 |
| 85 | Ga0105246_10064563 | 3300011119 | Bacteria | 2558 |
| 86 | Ga0157378_10029509 | 3300013297 | Bacteria | 4843 |
| 87 | Ga0157378_10071257 | 3300013297 | Viruses | 3121 |
| 88 | Ga0163162_10004163 | 3300013306 | Bacteria | 13892 |
| 89 | Ga0163162_10007654 | 3300013306 | Bacteria | 10522 |
| 90 | Ga0163162_10039088 | 3300013306 | Bacteria | 4739 |
| 91 | Ga0163162_10159786 | 3300013306 | Unclassified | 2375 |
| 92 | Ga0163162_10318378 | 3300013306 | Bacteria | 1688 |
| 93 | Ga0157372_10104052 | 3300013307 | Bacteria | 3245 |
| 94 | Ga0157372_10207028 | 3300013307 | Bacteria | 2273 |
| 95 | Ga0157375_10644578 | 3300013308 | Bacteria | 1216 |
| 96 | Ga0157375_10829740 | 3300013308 | Bacteria | 1072 |
| 97 | Ga0163163_10005979 | 3300014325 | Bacteria | 10582 |
| 98 | Ga0163163_10040321 | 3300014325 | Bacteria | 4559 |
| 99 | Ga0157380_10004297 | 3300014326 | Bacteria | 9873 |
| 100 | Ga0157379_10018432 | 3300014968 | Bacteria | 6155 |
| 101 | Ga0157379_10053490 | 3300014968 | Bacteria | 3606 |
| 102 | Ga0157376_10028368 | 3300014969 | Bacteria | 4448 |
| 103 | Ga0157376_10166547 | 3300014969 | Bacteria | 2003 |
| 104 | Ga0163161_10268760 | 3300017792 | Bacteria | 1334 |
| 105 | Ga0207426_1000002 | 3300025302 | Bacteria | 1249660 |
| 106 | Ga0207680_10000021 | 3300025903 | Bacteria | 87712 |
| 107 | Ga0207647_10161276 | 3300025904 | Unclassified | 1308 |
| 108 | Ga0207654_10134267 | 3300025911 | Bacteria | 1570 |
| 109 | Ga0207671_10005121 | 3300025914 | Bacteria | 12215 |
| 110 | Ga0207646_10165723 | 3300025922 | Bacteria | 1995 |
| 111 | Ga0207646_10270244 | 3300025922 | Bacteria | 1537 |
| 112 | Ga0207646_10451894 | 3300025922 | Bacteria | 1159 |
| 113 | Ga0207650_10017263 | 3300025925 | Bacteria | 5051 |
| 114 | Ga0207659_10057545 | 3300025926 | Bacteria | 2788 |
| 115 | Ga0207644_10017935 | 3300025931 | Unclassified | 4786 |
| 116 | Ga0207644_10522167 | 3300025931 | Bacteria | 981 |
| 117 | Ga0207686_10000003 | 3300025934 | Bacteria | 376934 |
| 118 | Ga0207686_10000175 | 3300025934 | Bacteria | 49208 |
| 119 | Ga0207686_10153463 | 3300025934 | Bacteria | 1606 |
| 120 | Ga0207709_10000017 | 3300025935 | Bacteria | 470753 |
| 121 | Ga0207670_10172967 | 3300025936 | Bacteria | 1621 |
| 122 | Ga0207711_10169909 | 3300025941 | Bacteria | 1978 |
| 123 | Ga0207689_10022710 | 3300025942 | Bacteria | 5271 |
| 124 | Ga0207689_10149131 | 3300025942 | Unclassified | 1928 |
| 125 | Ga0207651_10009417 | 3300025960 | Bacteria | 5347 |
| 126 | Ga0207712_10044721 | 3300025961 | Bacteria | 3062 |
| 127 | Ga0207712_10159228 | 3300025961 | Bacteria | 1752 |
| 128 | Ga0207703_10141416 | 3300026035 | Unclassified | 2089 |
| 129 | Ga0207703_10215393 | 3300026035 | Unclassified | 1714 |
| 130 | Ga0207703_10481297 | 3300026035 | Bacteria | 1163 |
| 131 | Ga0207708_10000092 | 3300026075 | Bacteria | 70135 |
| 132 | Ga0207708_10559848 | 3300026075 | Bacteria | 965 |
| 133 | Ga0207641_10007306 | 3300026088 | Bacteria | 9204 |
| 134 | Ga0207641_10160406 | 3300026088 | Bacteria | 2044 |
| 135 | Ga0207676_10020305 | 3300026095 | Bacteria | 4859 |
| 136 | Ga0207676_10020352 | 3300026095 | Bacteria | 4855 |
| 137 | Ga0207676_10044735 | 3300026095 | Bacteria | 3417 |
| 138 | Ga0207675_100292584 | 3300026118 | Bacteria | 1584 |
| 139 | Ga0207698_10013067 | 3300026142 | Bacteria | 5465 |
| 140 | Ga0207698_10019867 | 3300026142 | Bacteria | 4611 |
| 141 | Ga0207698_10045085 | 3300026142 | Bacteria | 3319 |
| 142 | Ga0207698_10089074 | 3300026142 | Unclassified | 2519 |
| 143 | Ga0268265_10094987 | 3300028380 | Unclassified | 2393 |
| 144 | Ga0268264_10001668 | 3300028381 | Bacteria | 20453 |
| 145 | Ga0268264_10108385 | 3300028381 | Bacteria | 2428 |
| 146 | Ga0265319_1019714 | 3300028563 | Bacteria | 2512 |
| 147 | Ga0265318_10012258 | 3300028577 | Unclassified | 3657 |
| 148 | Ga0307515_10012813 | 3300028794 | Bacteria | 15739 |
| 149 | Ga0265324_10021532 | 3300029957 | Unclassified | 2310 |
| 150 | Ga0265327_10000051 | 3300031251 | Bacteria | 257963 |
| 151 | Ga0265327_10000244 | 3300031251 | Bacteria | 108867 |
| 152 | Ga0265314_10098386 | 3300031711 | Bacteria | 1887 |
| 153 | Ga0307507_10267325 | 3300033179 | Bacteria | 1084 |
| 154 | Ga0395899_0011717 | 3300037312 | Bacteria | 6712 |
| 155 | Ga0395900_0020989 | 3300037418 | Bacteria | 6675 |
| 156 | Ga0395900_0190067 | 3300037418 | Bacteria | 2083 |
| 157 | Ga0395898_0020004 | 3300037466 | Bacteria | 6804 |
| 158 | Ga0395898_0172330 | 3300037466 | Bacteria | 2068 |
| 159 | Ga0395898_0269640 | 3300037466 | Bacteria | 1623 |
| 160 | Ga0395901_0143069 | 3300038443 | Bacteria | 2514 |
| 161 | Ga0451577_0110029 | 3300042876 | Bacteria | 2464 |
| 162 | Ga0453683_0222205 | 3300044673 | Bacteria | 1201 |
| 163 | Ga0451576_0014068 | 3300045051 | Bacteria | 8917 |
| 164 | Ga0495665_0120194 | 3300046531 | Bacteria | 1376 |
| 165 | Ga0495598_0045955 | 3300046537 | Bacteria | 1296 |
| 166 | Ga0495668_0000354 | 3300046616 | Bacteria | 60932 |
| 167 | Ga0495668_0061035 | 3300046616 | Bacteria | 2080 |
| 168 | Ga0495658_0038870 | 3300046683 | Bacteria | 2637 |
| 169 | Ga0495672_0010371 | 3300047320 | Bacteria | 6646 |
| 170 | Ga0496116_0194536 | 3300048919 | Bacteria | 1069 |
| 171 | Ga0496122_0134475 | 3300048925 | Bacteria | 1562 |
| 172 | Ga0501291_000163 | 3300049514 | Bacteria | 8296 |
| 173 | Ga0501291_009388 | 3300049514 | Unclassified | 1371 |
| 174 | Ga0501292_020099 | 3300049515 | Bacteria | 1073 |
| 175 | Ga0501296_001541 | 3300049519 | Bacteria | 2340 |
| 176 | Ga0501298_001995 | 3300049521 | Bacteria | 3052 |
| 177 | Ga0501299_008478 | 3300049522 | Unclassified | 1672 |
| 178 | Ga0501300_020672 | 3300049523 | Bacteria | 962 |
| 179 | Ga0501038_0001019 | 3300049574 | Bacteria | 25222 |
| 180 | Ga0501047_0358514 | 3300049581 | Bacteria | 1294 |
| 181 | Ga0501067_0027018 | 3300049583 | Bacteria | 3179 |
| 182 | Ga0501206_007061 | 3300049653 | Bacteria | 1469 |
| 183 | Ga0501207_019928 | 3300049654 | Viruses | 1067 |
| 184 | Ga0501224_003976 | 3300049664 | Bacteria | 2081 |
| 185 | Ga0501227_001771 | 3300049665 | Viruses | 4796 |
| 186 | Ga0501233_003030 | 3300049668 | Viruses | 3003 |
| 187 | Ga0501235_004201 | 3300049669 | Bacteria | 3120 |
| 188 | Ga0501257_011158 | 3300049686 | Bacteria | 2048 |
| 189 | Ga0501225_0001493 | 3300049705 | Viruses | 7331 |
| 190 | Ga0501225_0008979 | 3300049705 | Bacteria | 2859 |
| 191 | Ga0501234_012676 | 3300049707 | Bacteria | 1321 |
| 192 | Ga0501266_005523 | 3300049763 | Bacteria | 1573 |
| 193 | Ga0501273_000525 | 3300049770 | Bacteria | 3126 |
| 194 | Ga0501283_003605 | 3300049779 | Viruses | 2056 |
| 195 | nmdc:mga0n895_110554_c1 | 3300050512 | Bacteria | 2764 |
| 196 | nmdc:mga0rr50_6370_c1 | 3300050513 | Bacteria | 7175 |
| 197 | nmdc:mga08x19_5_c1 | 3300050514 | Bacteria | 464292 |
| 198 | nmdc:mga0a205_218343_c1 | 3300050515 | Unclassified | 1793 |
| 199 | nmdc:mga0a205_85591_c1 | 3300050515 | Bacteria | 3044 |
| 200 | Ga0500611_000003 | 3300053727 | Bacteria | 333431 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300048919 | Ga0496116_0194536 | Ga0496116_0194536_23_691 | 221 |
| 2 | 3300005616 | Ga0068852_100435568 | Ga0068852_1004355681 | 250 |
| 3 | 3300049686 | Ga0501257_011158 | Ga0501257_011158_669_1436 | 250 |
| 4 | 3300049763 | Ga0501266_005523 | Ga0501266_005523_471_1238 | 250 |
| 5 | 3300005844 | Ga0068862_100161349 | Ga0068862_1001613492 | 267 |
| 6 | 3300005616 | Ga0068852_100117548 | Ga0068852_1001175481 | 270 |
| 7 | 3300048925 | Ga0496122_0134475 | Ga0496122_0134475_721_1539 | 271 |
| 8 | 3300046537 | Ga0495598_0045955 | Ga0495598_0045955_278_1192 | 273 |
| 9 | 3300005536 | Ga0070697_100474987 | Ga0070697_1004749871 | 275 |
| 10 | 3300025934 | Ga0207686_10153463 | Ga0207686_101534632 | 275 |
| 11 | 3300026142 | Ga0207698_10089074 | Ga0207698_100890742 | 275 |
| 12 | 3300028380 | Ga0268265_10094987 | Ga0268265_100949872 | 275 |
| 13 | 3300031251 | Ga0265327_10000051 | Ga0265327_10000051146 | 275 |
| 14 | 3300005337 | Ga0070682_100050752 | Ga0070682_1000507523 | 276 |
| 15 | 3300005441 | Ga0070700_100000101 | Ga0070700_10000010115 | 276 |
| 16 | 3300005843 | Ga0068860_100091150 | Ga0068860_1000911503 | 276 |
| 17 | 3300009101 | Ga0105247_10194357 | Ga0105247_101943572 | 276 |
| 18 | 3300009553 | Ga0105249_10232668 | Ga0105249_102326681 | 276 |
| 19 | 3300025926 | Ga0207659_10057545 | Ga0207659_100575452 | 276 |
| 20 | 3300025960 | Ga0207651_10009417 | Ga0207651_100094172 | 276 |
| 21 | 3300026075 | Ga0207708_10000092 | Ga0207708_1000009255 | 276 |
| 22 | 3300028381 | Ga0268264_10108385 | Ga0268264_101083853 | 276 |
| 23 | 3300044673 | Ga0453683_0222205 | Ga0453683_0222205_51_881 | 276 |
| 24 | 3300049514 | Ga0501291_009388 | Ga0501291_009388_175_1005 | 276 |
| 25 | 3300049664 | Ga0501224_003976 | Ga0501224_003976_1191_2021 | 276 |
| 26 | 3300049669 | Ga0501235_004201 | Ga0501235_004201_2108_2938 | 276 |
| 27 | 3300049705 | Ga0501225_0008979 | Ga0501225_0008979_42_872 | 276 |
| 28 | 3300049770 | Ga0501273_000525 | Ga0501273_000525_304_1134 | 276 |
| 29 | 3300050515 | nmdc:mga0a205_85591_c1 | nmdc:mga0a205_85591_c1_1412_2242 | 276 |
| 30 | 3300005467 | Ga0070706_100228127 | Ga0070706_1002281271 | 277 |
| 31 | 3300005536 | Ga0070697_100147691 | Ga0070697_1001476912 | 277 |
| 32 | 3300033179 | Ga0307507_10267325 | Ga0307507_102673251 | 277 |
| 33 | 3300049514 | Ga0501291_000163 | Ga0501291_000163_1003_1836 | 277 |
| 34 | 3300049519 | Ga0501296_001541 | Ga0501296_001541_313_1146 | 277 |
| 35 | 3300049521 | Ga0501298_001995 | Ga0501298_001995_367_1200 | 277 |
| 36 | 3300049522 | Ga0501299_008478 | Ga0501299_008478_797_1630 | 277 |
| 37 | 3300049523 | Ga0501300_020672 | Ga0501300_020672_92_925 | 277 |
| 38 | 3300049653 | Ga0501206_007061 | Ga0501206_007061_317_1150 | 277 |
| 39 | 3300049654 | Ga0501207_019928 | Ga0501207_019928_43_876 | 277 |
| 40 | 3300049665 | Ga0501227_001771 | Ga0501227_001771_660_1493 | 277 |
| 41 | 3300049668 | Ga0501233_003030 | Ga0501233_003030_1473_2306 | 277 |
| 42 | 3300049705 | Ga0501225_0001493 | Ga0501225_0001493_6461_7294 | 277 |
| 43 | 3300049707 | Ga0501234_012676 | Ga0501234_012676_408_1241 | 277 |
| 44 | 3300005445 | Ga0070708_100003857 | Ga0070708_1000038578 | 278 |
| 45 | 3300005467 | Ga0070706_100224257 | Ga0070706_1002242571 | 278 |
| 46 | 3300005471 | Ga0070698_100400093 | Ga0070698_1004000931 | 278 |
| 47 | 3300005518 | Ga0070699_100038322 | Ga0070699_1000383225 | 278 |
| 48 | 3300005617 | Ga0068859_100190457 | Ga0068859_1001904573 | 278 |
| 49 | 3300006931 | Ga0097620_100190454 | Ga0097620_1001904542 | 278 |
| 50 | 3300007076 | Ga0075435_100035659 | Ga0075435_1000356594 | 278 |
| 51 | 3300014968 | Ga0157379_10018432 | Ga0157379_100184325 | 278 |
| 52 | 3300025941 | Ga0207711_10169909 | Ga0207711_101699091 | 278 |
| 53 | 3300026035 | Ga0207703_10481297 | Ga0207703_104812972 | 278 |
| 54 | 3300005615 | Ga0070702_100003805 | Ga0070702_1000038056 | 279 |
| 55 | 3300013308 | Ga0157375_10829740 | Ga0157375_108297401 | 279 |
| 56 | 3300011119 | Ga0105246_10064563 | Ga0105246_100645634 | 281 |
| 57 | iso_pu_bacteria | 2643221543 | 2643739713 | 281 |
| 58 | 3300009148 | Ga0105243_10001614 | Ga0105243_1000161420 | 282 |
| 59 | 3300009176 | Ga0105242_10042651 | Ga0105242_100426512 | 282 |
| 60 | iso_pu_bacteria | 2818991442 | 2819573515 | 286 |
| 61 | 3300014326 | Ga0157380_10004297 | Ga0157380_1000429710 | 287 |
| 62 | 3300046531 | Ga0495665_0120194 | Ga0495665_0120194_212_1090 | 287 |
| 63 | 3300046683 | Ga0495658_0038870 | Ga0495658_0038870_588_1466 | 287 |
| 64 | 3300037312 | Ga0395899_0011717 | Ga0395899_0011717_2342_3223 | 288 |
| 65 | 3300037418 | Ga0395900_0020989 | Ga0395900_0020989_1874_2755 | 288 |
| 66 | 3300037466 | Ga0395898_0020004 | Ga0395898_0020004_3921_4802 | 288 |
| 67 | 3300029957 | Ga0265324_10021532 | Ga0265324_100215322 | 289 |
| 68 | 3300037418 | Ga0395900_0190067 | Ga0395900_0190067_1015_1899 | 289 |
| 69 | 3300037466 | Ga0395898_0172330 | Ga0395898_0172330_1075_1959 | 289 |
| 70 | 3300037466 | Ga0395898_0269640 | Ga0395898_0269640_319_1203 | 289 |
| 71 | 3300003322 | rootL2_10187058 | rootL2_101870582 | 290 |
| 72 | 3300003354 | JGI25160J50197_1001227 | JGI25160J50197_100122714 | 290 |
| 73 | 3300005262 | Ga0065165_1012159 | Ga0065165_10121594 | 290 |
| 74 | 3300005331 | Ga0070670_100016514 | Ga0070670_1000165144 | 290 |
| 75 | 3300005334 | Ga0068869_100102794 | Ga0068869_1001027941 | 290 |
| 76 | 3300005335 | Ga0070666_10000055 | Ga0070666_1000005526 | 290 |
| 77 | 3300005339 | Ga0070660_100067992 | Ga0070660_1000679922 | 290 |
| 78 | 3300005339 | Ga0070660_100598363 | Ga0070660_1005983631 | 290 |
| 79 | 3300005340 | Ga0070689_100150156 | Ga0070689_1001501562 | 290 |
| 80 | 3300005466 | Ga0070685_10028046 | Ga0070685_100280462 | 290 |
| 81 | 3300005615 | Ga0070702_100369551 | Ga0070702_1003695511 | 290 |
| 82 | 3300005616 | Ga0068852_100045565 | Ga0068852_1000455652 | 290 |
| 83 | 3300005616 | Ga0068852_100069443 | Ga0068852_1000694433 | 290 |
| 84 | 3300005618 | Ga0068864_100036446 | Ga0068864_1000364463 | 290 |
| 85 | 3300005618 | Ga0068864_100056432 | Ga0068864_1000564323 | 290 |
| 86 | 3300005841 | Ga0068863_100007856 | Ga0068863_1000078568 | 290 |
| 87 | 3300005842 | Ga0068858_100075543 | Ga0068858_1000755432 | 290 |
| 88 | 3300005843 | Ga0068860_100025852 | Ga0068860_1000258522 | 290 |
| 89 | 3300006237 | Ga0097621_100072138 | Ga0097621_1000721383 | 290 |
| 90 | 3300006358 | Ga0068871_100024377 | Ga0068871_1000243774 | 290 |
| 91 | 3300009176 | Ga0105242_10002507 | Ga0105242_1000250712 | 290 |
| 92 | 3300009176 | Ga0105242_10193243 | Ga0105242_101932432 | 290 |
| 93 | 3300009545 | Ga0105237_10010242 | Ga0105237_100102428 | 290 |
| 94 | 3300009553 | Ga0105249_10055027 | Ga0105249_100550273 | 290 |
| 95 | 3300009553 | Ga0105249_10060704 | Ga0105249_100607042 | 290 |
| 96 | 3300010375 | Ga0105239_10162770 | Ga0105239_101627702 | 290 |
| 97 | 3300011119 | Ga0105246_10004763 | Ga0105246_100047638 | 290 |
| 98 | 3300011119 | Ga0105246_10008751 | Ga0105246_100087515 | 290 |
| 99 | 3300013297 | Ga0157378_10029509 | Ga0157378_100295093 | 290 |
| 100 | 3300013306 | Ga0163162_10004163 | Ga0163162_100041635 | 290 |
| 101 | 3300013306 | Ga0163162_10039088 | Ga0163162_100390882 | 290 |
| 102 | 3300013306 | Ga0163162_10318378 | Ga0163162_103183781 | 290 |
| 103 | 3300013307 | Ga0157372_10207028 | Ga0157372_102070282 | 290 |
| 104 | 3300013308 | Ga0157375_10644578 | Ga0157375_106445781 | 290 |
| 105 | 3300014968 | Ga0157379_10053490 | Ga0157379_100534906 | 290 |
| 106 | 3300014969 | Ga0157376_10028368 | Ga0157376_100283684 | 290 |
| 107 | 3300014969 | Ga0157376_10166547 | Ga0157376_101665472 | 290 |
| 108 | 3300025302 | Ga0207426_1000002 | Ga0207426_1000002622 | 290 |
| 109 | 3300025903 | Ga0207680_10000021 | Ga0207680_1000002126 | 290 |
| 110 | 3300025914 | Ga0207671_10005121 | Ga0207671_100051219 | 290 |
| 111 | 3300025925 | Ga0207650_10017263 | Ga0207650_100172633 | 290 |
| 112 | 3300025931 | Ga0207644_10522167 | Ga0207644_105221671 | 290 |
| 113 | 3300025934 | Ga0207686_10000175 | Ga0207686_100001756 | 290 |
| 114 | 3300025936 | Ga0207670_10172967 | Ga0207670_101729671 | 290 |
| 115 | 3300025942 | Ga0207689_10149131 | Ga0207689_101491312 | 290 |
| 116 | 3300025961 | Ga0207712_10044721 | Ga0207712_100447212 | 290 |
| 117 | 3300025961 | Ga0207712_10159228 | Ga0207712_101592281 | 290 |
| 118 | 3300026088 | Ga0207641_10007306 | Ga0207641_100073065 | 290 |
| 119 | 3300026095 | Ga0207676_10020352 | Ga0207676_100203523 | 290 |
| 120 | 3300026095 | Ga0207676_10044735 | Ga0207676_100447353 | 290 |
| 121 | 3300026118 | Ga0207675_100292584 | Ga0207675_1002925842 | 290 |
| 122 | 3300026142 | Ga0207698_10013067 | Ga0207698_100130677 | 290 |
| 123 | 3300026142 | Ga0207698_10045085 | Ga0207698_100450852 | 290 |
| 124 | 3300028381 | Ga0268264_10001668 | Ga0268264_100016682 | 290 |
| 125 | 3300028794 | Ga0307515_10012813 | Ga0307515_1001281315 | 290 |
| 126 | 3300046616 | Ga0495668_0000354 | Ga0495668_0000354_35547_36434 | 290 |
| 127 | 3300046616 | Ga0495668_0061035 | Ga0495668_0061035_95_988 | 290 |
| 128 | 3300047320 | Ga0495672_0010371 | Ga0495672_0010371_4458_5354 | 290 |
| 129 | 3300053727 | Ga0500611_000003 | Ga0500611_000003_41946_42833 | 290 |
| 130 | 3300005290 | Ga0065712_10108662 | Ga0065712_101086621 | 291 |
| 131 | 3300005293 | Ga0065715_10103988 | Ga0065715_101039883 | 291 |
| 132 | 3300005334 | Ga0068869_100051636 | Ga0068869_1000516362 | 291 |
| 133 | 3300005354 | Ga0070675_100190651 | Ga0070675_1001906512 | 291 |
| 134 | 3300005355 | Ga0070671_100027483 | Ga0070671_1000274834 | 291 |
| 135 | 3300005444 | Ga0070694_100012114 | Ga0070694_1000121141 | 291 |
| 136 | 3300005444 | Ga0070694_100048119 | Ga0070694_1000481192 | 291 |
| 137 | 3300005444 | Ga0070694_100257963 | Ga0070694_1002579632 | 291 |
| 138 | 3300005468 | Ga0070707_100086262 | Ga0070707_1000862622 | 291 |
| 139 | 3300005468 | Ga0070707_100356831 | Ga0070707_1003568311 | 291 |
| 140 | 3300005471 | Ga0070698_100022480 | Ga0070698_1000224804 | 291 |
| 141 | 3300005471 | Ga0070698_100098447 | Ga0070698_1000984473 | 291 |
| 142 | 3300005536 | Ga0070697_100001203 | Ga0070697_10000120313 | 291 |
| 143 | 3300005536 | Ga0070697_100002097 | Ga0070697_1000020978 | 291 |
| 144 | 3300005536 | Ga0070697_100321106 | Ga0070697_1003211062 | 291 |
| 145 | 3300005549 | Ga0070704_100153906 | Ga0070704_1001539063 | 291 |
| 146 | 3300005616 | Ga0068852_100040008 | Ga0068852_1000400084 | 291 |
| 147 | 3300005618 | Ga0068864_100011690 | Ga0068864_1000116906 | 291 |
| 148 | 3300005618 | Ga0068864_100045374 | Ga0068864_1000453746 | 291 |
| 149 | 3300005840 | Ga0068870_10037608 | Ga0068870_100376081 | 291 |
| 150 | 3300005841 | Ga0068863_100034816 | Ga0068863_1000348163 | 291 |
| 151 | 3300005842 | Ga0068858_100187636 | Ga0068858_1001876362 | 291 |
| 152 | 3300005843 | Ga0068860_100150419 | Ga0068860_1001504192 | 291 |
| 153 | 3300005844 | Ga0068862_100206745 | Ga0068862_1002067451 | 291 |
| 154 | 3300006871 | Ga0075434_100112417 | Ga0075434_1001124172 | 291 |
| 155 | 3300006914 | Ga0075436_100000046 | Ga0075436_1000000465 | 291 |
| 156 | 3300007076 | Ga0075435_100012542 | Ga0075435_1000125425 | 291 |
| 157 | 3300009148 | Ga0105243_10000124 | Ga0105243_1000012477 | 291 |
| 158 | 3300009176 | Ga0105242_10000021 | Ga0105242_10000021112 | 291 |
| 159 | 3300009551 | Ga0105238_10007783 | Ga0105238_100077837 | 291 |
| 160 | 3300013297 | Ga0157378_10071257 | Ga0157378_100712572 | 291 |
| 161 | 3300013306 | Ga0163162_10159786 | Ga0163162_101597863 | 291 |
| 162 | 3300014325 | Ga0163163_10005979 | Ga0163163_100059795 | 291 |
| 163 | 3300014325 | Ga0163163_10040321 | Ga0163163_100403213 | 291 |
| 164 | 3300017792 | Ga0163161_10268760 | Ga0163161_102687601 | 291 |
| 165 | 3300025904 | Ga0207647_10161276 | Ga0207647_101612761 | 291 |
| 166 | 3300025911 | Ga0207654_10134267 | Ga0207654_101342672 | 291 |
| 167 | 3300025922 | Ga0207646_10165723 | Ga0207646_101657231 | 291 |
| 168 | 3300025922 | Ga0207646_10270244 | Ga0207646_102702442 | 291 |
| 169 | 3300025922 | Ga0207646_10451894 | Ga0207646_104518941 | 291 |
| 170 | 3300025931 | Ga0207644_10017935 | Ga0207644_100179354 | 291 |
| 171 | 3300025934 | Ga0207686_10000003 | Ga0207686_10000003106 | 291 |
| 172 | 3300025935 | Ga0207709_10000017 | Ga0207709_10000017165 | 291 |
| 173 | 3300025942 | Ga0207689_10022710 | Ga0207689_100227104 | 291 |
| 174 | 3300026035 | Ga0207703_10141416 | Ga0207703_101414162 | 291 |
| 175 | 3300026075 | Ga0207708_10559848 | Ga0207708_105598481 | 291 |
| 176 | 3300026088 | Ga0207641_10160406 | Ga0207641_101604061 | 291 |
| 177 | 3300026095 | Ga0207676_10020305 | Ga0207676_100203052 | 291 |
| 178 | 3300026142 | Ga0207698_10019867 | Ga0207698_100198674 | 291 |
| 179 | 3300031251 | Ga0265327_10000244 | Ga0265327_1000024466 | 291 |
| 180 | 3300038443 | Ga0395901_0143069 | Ga0395901_0143069_1600_2484 | 291 |
| 181 | 3300049515 | Ga0501292_020099 | Ga0501292_020099_53_928 | 291 |
| 182 | 3300049574 | Ga0501038_0001019 | Ga0501038_0001019_23354_24229 | 291 |
| 183 | 3300049581 | Ga0501047_0358514 | Ga0501047_0358514_119_994 | 291 |
| 184 | 3300049779 | Ga0501283_003605 | Ga0501283_003605_267_1142 | 291 |
| 185 | 3300050512 | nmdc:mga0n895_110554_c1 | nmdc:mga0n895_110554_c1_1551_2426 | 291 |
| 186 | 3300050513 | nmdc:mga0rr50_6370_c1 | nmdc:mga0rr50_6370_c1_3613_4488 | 291 |
| 187 | 3300050514 | nmdc:mga08x19_5_c1 | nmdc:mga08x19_5_c1_173625_174500 | 291 |
| 188 | 3300050515 | nmdc:mga0a205_218343_c1 | nmdc:mga0a205_218343_c1_655_1530 | 291 |
| 189 | 3300003320 | rootH2_10185077 | rootH2_101850773 | 292 |
| 190 | 3300028577 | Ga0265318_10012258 | Ga0265318_100122583 | 292 |
| 191 | 3300031711 | Ga0265314_10098386 | Ga0265314_100983863 | 292 |
| 192 | 3300003320 | rootH2_10007602 | rootH2_1000760222 | 293 |
| 193 | 3300003322 | rootL2_10149080 | rootL2_101490802 | 293 |
| 194 | 3300005842 | Ga0068858_100267750 | Ga0068858_1002677502 | 293 |
| 195 | 3300006358 | Ga0068871_100274058 | Ga0068871_1002740582 | 293 |
| 196 | 3300013306 | Ga0163162_10007654 | Ga0163162_100076549 | 293 |
| 197 | 3300013307 | Ga0157372_10104052 | Ga0157372_101040522 | 293 |
| 198 | 3300026035 | Ga0207703_10215393 | Ga0207703_102153932 | 293 |
| 199 | 3300028563 | Ga0265319_1019714 | Ga0265319_10197142 | 293 |
| 200 | 3300042876 | Ga0451577_0110029 | Ga0451577_0110029_788_1741 | 293 |
| 201 | 3300045051 | Ga0451576_0014068 | Ga0451576_0014068_3803_4756 | 293 |
| 202 | 3300049583 | Ga0501067_0027018 | Ga0501067_0027018_1409_2290 | 293 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3qv2-assembly1.cif.gz_A | structure analysis of entamoeba histolytica methyltransferase ehmeth | 0.806 | 1 | 290 |
| 6fdf-assembly4.cif.gz_D | crystal structure of s. pombe dnmt2 methyltransferase | 0.8049 | 4 | 291 |
| 4h0n-assembly4.cif.gz_D | crystal structure of spodoptera frugiperda dnmt2 e260a/e261a/k263a mutant | 0.8032 | 3 | 282 |
| 3lx6-assembly2.cif.gz_B | crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457t | 0.7997 | 1 | 292 |
| 3qv2-assembly1.cif.gz_A | structure analysis of entamoeba histolytica methyltransferase ehmeth | 0.7959 | 1 | 290 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3ptaA01 | Alpha Beta;Alpha-Beta Complex;DNA Methylase; Chain A, domain 2;DNA Methylase, subunit A, domain 2 | 0.8786 | 236 | 278 | 3.90.120.10 |
| af_F1M3Y3_7_184_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.819 | 4 | 70 | 3.40.50.150 |
| 1svuA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8133 | 1 | 288 | 3.40.50.150 |
| af_P9WK01_14_228_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8118 | 3 | 71 | 3.40.50.150 |
| af_B1Q3J6_1074_1346_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8098 | 2 | 163 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1Q9BWC7-F1-model_v4 | Modification methylase HpaII | 0.9422 | 1 | 289 |
GO:0008168
GO:0032259 |
| AF-A0A1Q9BWC7-F1-model_v4 | Modification methylase HpaII | 0.9268 | 1 | 289 |
GO:0008168
GO:0032259 |
| AF-A0A5M9TYH8-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9249 | 1 | 291 |
GO:0003677
GO:0009307 GO:0032259 GO:0044027 GO:0051719 GO:0051720 |
| AF-A0A5M9TYH8-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9155 | 1 | 291 |
GO:0003677
GO:0009307 GO:0032259 GO:0044027 GO:0051719 GO:0051720 |
| AF-A0A350SK50-F1-model_v4 | deleted | 0.905 | 1 | 240 |
|
Predicted Structure (AlphaFold2)
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