F308892

General Info

Members Datasets Scaffolds Average Seq Length
201 172 402 331

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0016880|Ga0495592_0016880_1665_2765
Length 366
Sequence MVCKNRAMHRAMIEAAGNAGTAPAPEQPAASTVFRHPGRHRVAVFVLDGVIPFELGIPLRILGMAENPDDGTPLYEVVTCALRPGPVRTDADFPILVEHGTQALAEADTVVFPASHELGPVFTEGRLTPPLAAAFAAVRPGARTVSICTGSFLLGAAGLLDGRPATTHWSSADHFQRTFPRIRVDPDVLYVDDGDVLTSAGVAAGIDLCLHIVRRDFGTAVANSVARRTVVPPHREGGQAQYVRRPLPEPQMAGTERARAWALARLDQPLSLRQLAACESMSVRTFTRRFRDEVGMSPGRWLTQQRVEHARQLLESTDLGVDTVARECGFGTAASMRQHLQAALGVSPSAYRRTFQTSARADDARM

Samples

Sample ID Description Type Environment
1 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
17 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
18 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
19 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
20 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
21 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
22 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
30 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
31 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
32 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
33 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
34 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
35 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
36 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
37 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
38 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
39 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
40 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
41 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
42 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
43 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
44 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
45 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
46 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
52 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
55 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
56 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
57 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
58 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
59 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
60 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
61 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
62 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
63 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
64 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
65 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
66 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
67 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
68 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
69 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
70 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
71 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
72 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
73 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
74 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
75 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
76 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
77 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
78 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
79 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
80 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
81 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
82 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
83 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
84 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
85 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
86 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
87 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
88 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
104 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
105 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
106 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
107 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
108 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
109 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
110 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
111 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
112 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
113 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
114 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
115 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
116 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
117 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
118 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
119 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
120 2506783011 Frankia datiscae Dg1 Isolate Nodule
121 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
122 2643221647 Streptomyces sp. Root369 Isolate Unclassified
123 2643221670 Streptomyces sp. Root431 Isolate Unclassified
124 2643221692 Nocardia sp. Root136 Isolate Unclassified
125 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
126 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
127 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
128 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
129 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
130 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
131 2773857933 Frankia sp. BMG5.30 Isolate Nodule
132 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
133 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
134 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
135 2808606394 Promicromonospora sp. C35 Isolate Unclassified
136 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
137 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
138 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
139 2862574272 Streptomyces sp. AcE210 Isolate Nodule
140 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
141 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
142 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
143 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
144 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
145 2867369537 Streptomyces sp. Z26 Isolate Unclassified
146 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
147 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
148 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
149 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
150 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
151 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
152 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
153 2922554459 Rhodococcus sp. 66b Isolate Unclassified
154 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
155 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
156 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
157 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
158 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
159 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
160 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
161 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
162 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
163 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
164 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
165 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
166 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
167 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
168 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
169 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
170 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
171 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
172 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.13
Metatranscriptomes 0
Isolates 26.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.96
Nodule 1.49
Rhizoplane 3.98
Rhizosphere 65.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495592_0016880 3300046454 Bacteria 5543
2 rootH1_10003615 3300003323 Bacteria 4032
3 Ga0070709_10102701 3300005434 Bacteria 1907
4 Ga0070714_100008430 3300005435 Bacteria 8048
5 Ga0070710_10000137 3300005437 Bacteria 33946
6 Ga0070663_100183119 3300005455 Bacteria 1626
7 Ga0070678_100078875 3300005456 Bacteria 2489
8 Ga0070665_100304062 3300005548 Bacteria 1598
9 Ga0068870_10039415 3300005840 Bacteria 2445
10 Ga0081455_10000146 3300005937 Bacteria 83878
11 Ga0081538_10013470 3300005981 Bacteria 6468
12 Ga0111539_10076304 3300009094 Bacteria 3946
13 Ga0105243_10035811 3300009148 Bacteria 3849
14 Ga0105248_10037856 3300009177 Bacteria 5398
15 Ga0105238_10292587 3300009551 Bacteria 1611
16 Ga0105249_10082927 3300009553 Bacteria 2983
17 Ga0157369_10081586 3300013105 Bacteria 3461
18 Ga0157372_10294142 3300013307 Bacteria 1888
19 Ga0157375_10038025 3300013308 Bacteria 4618
20 Ga0157380_10288091 3300014326 Bacteria 1506
21 Ga0207426_1003601 3300025302 Bacteria 8228
22 Ga0207426_1050849 3300025302 Bacteria 1233
23 Ga0207692_10004355 3300025898 Bacteria 5605
24 Ga0207643_10073707 3300025908 Bacteria 1968
25 Ga0207664_10010610 3300025929 Bacteria 6511
26 Ga0207690_10103747 3300025932 Bacteria 2036
27 Ga0207665_10165383 3300025939 Bacteria 1594
28 Ga0207689_10143366 3300025942 Bacteria 1968
29 Ga0207683_10041882 3300026121 Bacteria 3999
30 Ga0207428_10084781 3300027907 Bacteria 2468
31 Ga0307517_10000838 3300028786 Bacteria 52894
32 Ga0307515_10000205 3300028794 Bacteria 144874
33 Ga0307515_10011661 3300028794 Bacteria 16654
34 Ga0307515_10028416 3300028794 Bacteria 9507
35 Ga0316177_1156449 3300030731 Bacteria 2454
36 Ga0314311_1076199 3300030733 Bacteria 3607
37 Ga0307509_10032053 3300031507 Bacteria 5795
38 Ga0307509_10340635 3300031507 Bacteria 1227
39 Ga0307508_10000474 3300031616 Bacteria 48456
40 Ga0307508_10005782 3300031616 Bacteria 11692
41 Ga0307508_10022443 3300031616 Bacteria 5737
42 Ga0307508_10061729 3300031616 Bacteria 3310
43 Ga0307514_10102303 3300031649 Bacteria 2054
44 Ga0307514_10228292 3300031649 Bacteria 1132
45 Ga0307516_10032205 3300031730 Bacteria 5280
46 Ga0373951_0000951 3300035091 Bacteria 7786
47 Ga0451791_1012892 3300041451 Bacteria 2001
48 Ga0451795_0916529 3300041456 Bacteria 3099
49 Ga0439448_0005726 3300042005 Bacteria 3546
50 Ga0439455_0000677 3300042012 Bacteria 5018
51 Ga0450902_003111 3300042137 Bacteria 2401
52 Ga0450903_002658 3300042138 Bacteria 3148
53 Ga0439458_0000030 3300042157 Bacteria 22373
54 Ga0450901_004073 3300042533 Bacteria 1515
55 Ga0466972_0002866 3300044658 Bacteria 8538
56 Ga0466972_0018249 3300044658 Bacteria 3507
57 Ga0466965_0001940 3300044683 Bacteria 8636
58 Ga0466965_0033221 3300044683 Bacteria 2521
59 Ga0466965_0049987 3300044683 Bacteria 2072
60 Ga0466965_0065278 3300044683 Bacteria 1824
61 Ga0466966_0001153 3300044684 Bacteria 16979
62 Ga0466961_0078255 3300044693 Bacteria 2095
63 Ga0466968_0010301 3300044735 Bacteria 3622
64 Ga0466968_0170087 3300044735 Bacteria 1009
65 Ga0466970_0064865 3300044765 Bacteria 1959
66 Ga0466959_0075947 3300045049 Bacteria 2427
67 Ga0495627_006844 3300046453 Bacteria 4434
68 Ga0495592_0009673 3300046454 Bacteria 7256
69 Ga0495629_0047154 3300046459 Bacteria 3023
70 Ga0495629_0110401 3300046459 Bacteria 1917
71 Ga0495629_0235783 3300046459 Bacteria 1260
72 Ga0495651_0007821 3300046462 Bacteria 8184
73 Ga0495662_0051377 3300046476 Bacteria 1990
74 Ga0495594_0136261 3300046499 Bacteria 1391
75 Ga0495610_0121799 3300046512 Bacteria 1142
76 Ga0495618_0014570 3300046514 Bacteria 4793
77 Ga0495618_0043673 3300046514 Bacteria 2828
78 Ga0495628_0011909 3300046516 Bacteria 7334
79 Ga0495628_0054321 3300046516 Bacteria 3158
80 Ga0495632_0040364 3300046519 Bacteria 2351
81 Ga0495666_0021100 3300046526 Bacteria 3225
82 Ga0495652_0005042 3300046529 Bacteria 12504
83 Ga0495652_0012963 3300046529 Bacteria 7514
84 Ga0495640_0020401 3300046533 Bacteria 4876
85 Ga0495640_0103233 3300046533 Bacteria 1869
86 Ga0495597_0071342 3300046542 Bacteria 1496
87 Ga0495645_0103347 3300046543 Bacteria 2024
88 Ga0495668_0000736 3300046616 Bacteria 39225
89 Ga0495634_0131969 3300046642 Bacteria 1591
90 Ga0495625_0031347 3300046660 Bacteria 3956
91 Ga0495635_0001040 3300046663 Bacteria 18386
92 Ga0495635_0077712 3300046663 Bacteria 2273
93 Ga0495657_0020169 3300046675 Bacteria 4795
94 Ga0495646_0074588 3300046680 Bacteria 1990
95 Ga0495658_0027768 3300046683 Bacteria 3049
96 Ga0495613_0101237 3300046689 Bacteria 2081
97 Ga0495624_0092776 3300046690 Bacteria 1862
98 Ga0495670_0002301 3300046691 Bacteria 9440
99 Ga0495589_0036014 3300046794 Bacteria 2481
100 Ga0495600_0003525 3300046809 Bacteria 9202
101 Ga0495600_0037192 3300046809 Bacteria 3164
102 Ga0495660_0033450 3300046810 Bacteria 2882
103 Ga0495604_0030210 3300047317 Bacteria 4305
104 Ga0495676_0002340 3300047321 Bacteria 16794
105 Ga0495687_008754 3300047443 Bacteria 5749
106 Ga0495687_014918 3300047443 Bacteria 3971
107 Ga0495675_0052177 3300047444 Bacteria 2597
108 Ga0495685_001229 3300047447 Bacteria 7857
109 Ga0495681_0033025 3300047470 Bacteria 2597
110 Ga0495686_0019295 3300047472 Bacteria 4558
111 Ga0496102_0114436 3300048905 Bacteria 2517
112 Ga0496108_0044900 3300048911 Bacteria 3690
113 Ga0496109_0086782 3300048912 Bacteria 2890
114 Ga0496112_0213596 3300048915 Bacteria 1886
115 Ga0496114_0035605 3300048917 Bacteria 4111
116 Ga0501031_0037684 3300049568 Bacteria 3156
117 Ga0501031_0076274 3300049568 Bacteria 2183
118 Ga0501032_0004475 3300049569 Bacteria 10524
119 Ga0501034_0031787 3300049571 Bacteria 5361
120 Ga0501036_0004864 3300049572 Bacteria 10854
121 Ga0501037_0004365 3300049573 Bacteria 10266
122 Ga0501037_0179648 3300049573 Bacteria 1502
123 Ga0501043_0166867 3300049579 Bacteria 1719
124 Ga0501047_0000133 3300049581 Bacteria 90926
125 Ga0501047_0007595 3300049581 Bacteria 10201
126 Ga0501047_0067652 3300049581 Bacteria 3442
127 Ga0501035_0053506 3300049822 Bacteria 3609
128 Ga0501044_0211015 3300049823 Bacteria 1896
129 nmdc:mga08y16_172285_c1 3300050511 Bacteria 2248
130 Ga0495601_0010508 3300053077 Bacteria 5512
131 Ga0495612_0015228 3300053078 Bacteria 3083
132 Ga0495619_0168930 3300053085 Bacteria 1512
133 Ga0500578_0034756 3300053086 Bacteria 3239
134 Ga0500553_018821 3300053101 Bacteria 3500
135 Ga0500560_003276 3300053107 Bacteria 3250
136 Ga0500560_012940 3300053107 Bacteria 2179
137 Ga0500569_001401 3300053109 Bacteria 4535
138 Ga0500621_028893 3300053126 Bacteria 2193
139 Ga0500628_004360 3300053129 Bacteria 2342
140 Ga0500652_000538 3300053131 Bacteria 13329
141 Ga0500658_0000368 3300053134 Bacteria 19898
142 Ga0500573_0100758 3300053140 Bacteria 1625
143 Ga0500600_0004002 3300053149 Bacteria 8587
144 Ga0500616_0003151 3300053153 Bacteria 12870
145 Ga0500633_0004993 3300053160 Bacteria 3106
146 Ga0500656_000309 3300053732 Bacteria 3434
147 Ga0466962_0020029 3300061719 Bacteria 3216
148 2506864892 2506783011 Bacteria 5323186
149 2515854551 2515154155 Bacteria 7985436
150 2644262246 2643221647 Bacteria 10741251
151 2644389797 2643221670 Bacteria 6497041
152 2644514993 2643221692 Bacteria 7282860
153 2738891958 2738541308 Bacteria 7020677
154 2739324453 2738543027 Bacteria 6409078
155 2739606640 2739367654 Bacteria 6049412
156 2753071513 2751185734 Bacteria 8863695
157 2760306555 2758568522 Bacteria 5953541
158 2774396264 2773857762 Bacteria 5971770
159 2774905617 2773857933 Bacteria 5818019
160 2776369461 2775506925 Bacteria 7237746
161 2786670578 2786546132 Bacteria 10419719
162 2793977989 2791355406 Bacteria 11364898
163 2809029862 2808606394 Bacteria 6248540
164 2812353387 2811994878 Bacteria 5992952
165 2831938348 2831935698 Bacteria 5963223
166 2861521639 2861520306 Bacteria 8348283
167 2862579280 2862574272 Bacteria 10567477
168 2863069632 2863067949 Bacteria 8541735
169 2866553379 2866552031 Bacteria 5824618
170 2867313002 2867312974 Bacteria 7058875
171 2867325027 2867319477 Bacteria 7069771
172 2867349543 2867346516 Bacteria 7608576
173 2867371850 2867369537 Bacteria 6501581
174 2868092276 2868088558 Bacteria 7609351
175 2870729512 2870721527 Bacteria 9689237
176 2870786769 2870782633 Bacteria 9624083
177 2891330621 2891326441 Bacteria 6439512
178 2891968986 2891968417 Bacteria 5821697
179 2899362740 2899359706 Bacteria 10940472
180 2918505678 2918501144 Bacteria 8668083
181 2922558237 2922554459 Bacteria 6683962
182 2954386271 2954380949 Bacteria 10050426
183 2954676898 2954673503 Bacteria 9685905
184 2954687260 2954682443 Bacteria 9862841
185 2954696908 2954691527 Bacteria 10720516
186 2954705227 2954701450 Bacteria 10834262
187 2990090142 2990088156 Bacteria 6657676
188 3003005174 3002998708 Bacteria 11715108
189 3006490787 3006486233 Bacteria 8157040
190 8025479949 8025478263 Bacteria 8209203
191 8033684694 8033684223 Bacteria 6906479
192 8047714517 8047710418 Bacteria 11023148
193 8047894419 8047893842 Bacteria 11723082
194 8048364633 8048356638 Bacteria 11044339
195 8048371436 8048369669 Bacteria 11666822
196 8048380237 8048379754 Bacteria 11877923
197 8053951801 8053945823 Bacteria 8962862
198 8056212824 8056207758 Bacteria 8639239
199 8056215104 8056207758 Bacteria 8639239
200 8056448860 8056447290 Bacteria 7680491
201 8056582829 8056579771 Bacteria 5840325
202 Ga0495592_0016880
203 rootH1_10003615
204 Ga0070709_10102701
205 Ga0070714_100008430
206 Ga0070710_10000137
207 Ga0070663_100183119
208 Ga0070678_100078875
209 Ga0070665_100304062
210 Ga0068870_10039415
211 Ga0081455_10000146
212 Ga0081538_10013470
213 Ga0111539_10076304
214 Ga0105243_10035811
215 Ga0105248_10037856
216 Ga0105238_10292587
217 Ga0105249_10082927
218 Ga0157369_10081586
219 Ga0157372_10294142
220 Ga0157375_10038025
221 Ga0157380_10288091
222 Ga0207426_1003601
223 Ga0207426_1050849
224 Ga0207692_10004355
225 Ga0207643_10073707
226 Ga0207664_10010610
227 Ga0207690_10103747
228 Ga0207665_10165383
229 Ga0207689_10143366
230 Ga0207683_10041882
231 Ga0207428_10084781
232 Ga0307517_10000838
233 Ga0307515_10000205
234 Ga0307515_10011661
235 Ga0307515_10028416
236 Ga0316177_1156449
237 Ga0314311_1076199
238 Ga0307509_10032053
239 Ga0307509_10340635
240 Ga0307508_10000474
241 Ga0307508_10005782
242 Ga0307508_10022443
243 Ga0307508_10061729
244 Ga0307514_10102303
245 Ga0307514_10228292
246 Ga0307516_10032205
247 Ga0373951_0000951
248 Ga0451791_1012892
249 Ga0451795_0916529
250 Ga0439448_0005726
251 Ga0439455_0000677
252 Ga0450902_003111
253 Ga0450903_002658
254 Ga0439458_0000030
255 Ga0450901_004073
256 Ga0466972_0002866
257 Ga0466972_0018249
258 Ga0466965_0001940
259 Ga0466965_0033221
260 Ga0466965_0049987
261 Ga0466965_0065278
262 Ga0466966_0001153
263 Ga0466961_0078255
264 Ga0466968_0010301
265 Ga0466968_0170087
266 Ga0466970_0064865
267 Ga0466959_0075947
268 Ga0495627_006844
269 Ga0495592_0009673
270 Ga0495629_0047154
271 Ga0495629_0110401
272 Ga0495629_0235783
273 Ga0495651_0007821
274 Ga0495662_0051377
275 Ga0495594_0136261
276 Ga0495610_0121799
277 Ga0495618_0014570
278 Ga0495618_0043673
279 Ga0495628_0011909
280 Ga0495628_0054321
281 Ga0495632_0040364
282 Ga0495666_0021100
283 Ga0495652_0005042
284 Ga0495652_0012963
285 Ga0495640_0020401
286 Ga0495640_0103233
287 Ga0495597_0071342
288 Ga0495645_0103347
289 Ga0495668_0000736
290 Ga0495634_0131969
291 Ga0495625_0031347
292 Ga0495635_0001040
293 Ga0495635_0077712
294 Ga0495657_0020169
295 Ga0495646_0074588
296 Ga0495658_0027768
297 Ga0495613_0101237
298 Ga0495624_0092776
299 Ga0495670_0002301
300 Ga0495589_0036014
301 Ga0495600_0003525
302 Ga0495600_0037192
303 Ga0495660_0033450
304 Ga0495604_0030210
305 Ga0495676_0002340
306 Ga0495687_008754
307 Ga0495687_014918
308 Ga0495675_0052177
309 Ga0495685_001229
310 Ga0495681_0033025
311 Ga0495686_0019295
312 Ga0496102_0114436
313 Ga0496108_0044900
314 Ga0496109_0086782
315 Ga0496112_0213596
316 Ga0496114_0035605
317 Ga0501031_0037684
318 Ga0501031_0076274
319 Ga0501032_0004475
320 Ga0501034_0031787
321 Ga0501036_0004864
322 Ga0501037_0004365
323 Ga0501037_0179648
324 Ga0501043_0166867
325 Ga0501047_0000133
326 Ga0501047_0007595
327 Ga0501047_0067652
328 Ga0501035_0053506
329 Ga0501044_0211015
330 nmdc:mga08y16_172285_c1
331 Ga0495601_0010508
332 Ga0495612_0015228
333 Ga0495619_0168930
334 Ga0500578_0034756
335 Ga0500553_018821
336 Ga0500560_003276
337 Ga0500560_012940
338 Ga0500569_001401
339 Ga0500621_028893
340 Ga0500628_004360
341 Ga0500652_000538
342 Ga0500658_0000368
343 Ga0500573_0100758
344 Ga0500600_0004002
345 Ga0500616_0003151
346 Ga0500633_0004993
347 Ga0500656_000309
348 Ga0466962_0020029
349 2506864892
350 2515854551
351 2644262246
352 2644389797
353 2644514993
354 2738891958
355 2739324453
356 2739606640
357 2753071513
358 2760306555
359 2774396264
360 2774905617
361 2776369461
362 2786670578
363 2793977989
364 2809029862
365 2812353387
366 2831938348
367 2861521639
368 2862579280
369 2863069632
370 2866553379
371 2867313002
372 2867325027
373 2867349543
374 2867371850
375 2868092276
376 2870729512
377 2870786769
378 2891330621
379 2891968986
380 2899362740
381 2918505678
382 2922558237
383 2954386271
384 2954676898
385 2954687260
386 2954696908
387 2954705227
388 2990090142
389 3003005174
390 3006490787
391 8025479949
392 8033684694
393 8047714517
394 8047894419
395 8048364633
396 8048371436
397 8048380237
398 8053951801
399 8056212824
400 8056215104
401 8056448860
402 8056582829

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

275

354

0.97

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

263

303

0.94

PF01965

DJ-1_PfpI

DJ-1/PfpI family

40

215

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.938 240 334
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.9318 237 344
3mkl-assembly2.cif.gz_B crystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12 0.9155 237 339
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9106 240 329
3lsg-assembly2.cif.gz_D the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9102 240 325
ID Description Score Start End Superfamily
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9636 237 339 1.10.10.60
af_P0A9E0_176_235_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9623 237 290 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9499 286 340 1.10.10.60
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9415 281 339 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9405 290 334 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7C6WMJ3-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9787 237 335 GO:0003700
GO:0043565
AF-A0A7X2P9I7-F1-model_v4 Stage 0 sporulation protein A homolog 0.9782 238 337 GO:0000160
GO:0003700
GO:0043565
AF-A0A1C5YP82-F1-model_v4 Stage 0 sporulation protein A homolog 0.9779 237 337 GO:0000160
GO:0003700
GO:0043565
AF-A0A2G8HQG4-F1-model_v4 AraC family transcriptional regulator 0.9735 238 339 GO:0003700
GO:0043565
AF-A0A484XH48-F1-model_v4 AraC family transcriptional regulator 0.9734 237 336 GO:0003700
GO:0043565

Map