F308065
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 201 | 126 | 199 | 1031 |
Family's Representative Sequence
| Representative Sequence | 3300005329|Ga0070683_100013453|Ga0070683_1000134533 |
| Length | 1094 |
| Sequence | MVASTTEKLCEVVRACASSGVVLATVRIEKTKAAARMVAKRCADFMTSNDKTWPVAGLLFASGFCALVYQIGWLREFRLIFGASTAASAAVLAIFIGGLGFGGWLLGRRADTHPRPLAFYAQLEGIVALSAAVSPILLALVRHWYVAIGGTPRLGLTGGTIVRLVLSALVLALPTLAMGGTLPAAARAITVQGDQRRRQLAMLYGCNTLGAVVGCTVATFFALELFGTRSTLWLAASVNLLVAVVARHIDRAMVPIEDEAAVNDAPVAAAAPVGFVLTASAVVGFAFFLMELVWYRMLGPLLGGSVFTFGLILAIALAGIGIGGLLYSLAGANRPATMSGFALTCLLEATFIAIPFALGDRLAVLTLVLTAFNTIGFWAHVGGWSVVTTIIVLPAALVAGYQFPLLVALLGRGRQGLGRQLGLTYAVNTIGAIVGSLAGGFGLLPWLSAPGAWRLVSAALVVLGLAALGLRAQRQDRRALLPQLALVAITIALLTATGPTAAWRHNPIGAGRVPVGTLTTPNKWRAVLQAARHDVVWEGDGTESSVALAWGDGGYAFVVNGKADGSAIVDAATQVMLGALGPILNASAKRALVIGLGSGSTAGWLGAVPSIERVDVVEIEPLILDVARACAAVNHDVLKNPKVHVTIGDARELLLLTPERYDIIASEPSNPFRSGIASLFTREYYEAASDRLTPDGLFLQWVQAYEVDARTLHTVYATMGTVFPYIETWETTVGDLVLVGARHPIHYDAAALSARIAQEPFKTALRTSWHATSLNGLFAHYVAGDALSRAVVTPNVERNEDDRNVIEFGFARGIGHNDRPILLEIRELARRLGVSEPVVQGARFDWSQLRTELVAFYAATGFGSEITPAGSPIERERQTAIEDFYVRNNLAAARENWKQQTDGPRNPVELVMLAALEASAGSEDALKFINEIRGYEPAEADTLLALLRSNQGQDEATASALEAALAGMNTDPWPLAAMKNQAITLAGTFGARSPALARRMIHALHTPFAAGLSPDRRLMTSLLLSRQAGFAEHCVAPAAALEPHPPWEATSLSLRRDCYAVTHDPRLSIADRDLSTFNAAESQAFAAGILPTAH |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 9 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 17 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 21 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 33 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 34 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 35 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 36 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 37 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 38 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 39 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 40 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 41 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 42 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 45 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 46 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 47 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 48 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 49 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 50 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 52 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 68 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 69 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 92 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 95 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 96 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 97 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 98 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 99 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 100 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 101 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 102 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 103 | 3300035085 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 | Metagenome | Rhizosphere |
| 104 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 105 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 106 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 107 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 108 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 109 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 110 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 111 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0.5 |
| Rhizosphere | 98.51 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10000016 | 3300003203 | Bacteria | 91056 |
| 2 | Ga0070658_10001949 | 3300005327 | Bacteria | 17352 |
| 3 | Ga0070658_10005207 | 3300005327 | Bacteria | 10579 |
| 4 | Ga0070683_100013453 | 3300005329 | Bacteria | 7136 |
| 5 | Ga0070690_100000219 | 3300005330 | Bacteria | 29859 |
| 6 | Ga0070670_100011781 | 3300005331 | Bacteria | 7479 |
| 7 | Ga0070670_100030923 | 3300005331 | Bacteria | 4611 |
| 8 | Ga0070666_10002149 | 3300005335 | Bacteria | 11976 |
| 9 | Ga0070666_10010268 | 3300005335 | Bacteria | 5852 |
| 10 | Ga0070682_100000082 | 3300005337 | Bacteria | 85071 |
| 11 | Ga0068868_100015407 | 3300005338 | Bacteria | 5654 |
| 12 | Ga0070692_10005166 | 3300005345 | Bacteria | 5529 |
| 13 | Ga0070668_100006630 | 3300005347 | Bacteria | 8581 |
| 14 | Ga0070669_100005719 | 3300005353 | Bacteria | 8965 |
| 15 | Ga0070675_100001561 | 3300005354 | Bacteria | 16926 |
| 16 | Ga0070671_100005641 | 3300005355 | Bacteria | 9960 |
| 17 | Ga0070671_100007571 | 3300005355 | Bacteria | 8682 |
| 18 | Ga0070674_100021609 | 3300005356 | Bacteria | 4136 |
| 19 | Ga0070674_100030969 | 3300005356 | Bacteria | 3540 |
| 20 | Ga0070673_100001663 | 3300005364 | Bacteria | 13164 |
| 21 | Ga0070688_100013732 | 3300005365 | Bacteria | 4576 |
| 22 | Ga0070667_100001693 | 3300005367 | Bacteria | 19716 |
| 23 | Ga0070667_100012923 | 3300005367 | Bacteria | 6901 |
| 24 | Ga0070667_100013596 | 3300005367 | Bacteria | 6726 |
| 25 | Ga0070713_100020873 | 3300005436 | Bacteria | 5028 |
| 26 | Ga0070701_10000479 | 3300005438 | Bacteria | 13684 |
| 27 | Ga0070701_10017470 | 3300005438 | Unclassified | 3353 |
| 28 | Ga0070694_100021030 | 3300005444 | Bacteria | 4165 |
| 29 | Ga0070708_100003388 | 3300005445 | Bacteria | 12485 |
| 30 | Ga0070708_100019288 | 3300005445 | Bacteria | 5728 |
| 31 | Ga0070706_100000062 | 3300005467 | Bacteria | 129915 |
| 32 | Ga0070706_100002351 | 3300005467 | Bacteria | 19084 |
| 33 | Ga0070706_100004265 | 3300005467 | Bacteria | 13877 |
| 34 | Ga0070706_100010191 | 3300005467 | Bacteria | 8740 |
| 35 | Ga0070707_100000623 | 3300005468 | Bacteria | 35482 |
| 36 | Ga0070707_100025447 | 3300005468 | Bacteria | 5615 |
| 37 | Ga0070698_100000024 | 3300005471 | Bacteria | 102551 |
| 38 | Ga0070698_100001108 | 3300005471 | Bacteria | 29706 |
| 39 | Ga0070698_100017806 | 3300005471 | Bacteria | 7484 |
| 40 | Ga0070698_100050923 | 3300005471 | Bacteria | 4219 |
| 41 | Ga0070699_100011729 | 3300005518 | Bacteria | 7565 |
| 42 | Ga0070699_100054627 | 3300005518 | Bacteria | 3457 |
| 43 | Ga0070697_100002077 | 3300005536 | Bacteria | 15311 |
| 44 | Ga0070672_100004719 | 3300005543 | Bacteria | 8944 |
| 45 | Ga0070672_100004883 | 3300005543 | Bacteria | 8818 |
| 46 | Ga0070672_100013810 | 3300005543 | Bacteria | 5710 |
| 47 | Ga0070695_100002167 | 3300005545 | Bacteria | 11251 |
| 48 | Ga0070696_100008820 | 3300005546 | Bacteria | 6746 |
| 49 | Ga0070693_100009041 | 3300005547 | Bacteria | 4943 |
| 50 | Ga0070665_100010940 | 3300005548 | Bacteria | 9177 |
| 51 | Ga0070704_100002054 | 3300005549 | Bacteria | 11169 |
| 52 | Ga0070704_100006529 | 3300005549 | Bacteria | 6878 |
| 53 | Ga0068854_100020320 | 3300005578 | Bacteria | 4491 |
| 54 | Ga0068856_100014348 | 3300005614 | Bacteria | 7659 |
| 55 | Ga0068859_100000339 | 3300005617 | Bacteria | 46761 |
| 56 | Ga0068864_100000001 | 3300005618 | Bacteria | 686767 |
| 57 | Ga0068864_100000104 | 3300005618 | Bacteria | 82096 |
| 58 | Ga0068858_100010843 | 3300005842 | Bacteria | 8616 |
| 59 | Ga0068858_100016541 | 3300005842 | Bacteria | 6927 |
| 60 | Ga0068860_100002317 | 3300005843 | Bacteria | 20003 |
| 61 | Ga0068860_100004853 | 3300005843 | Bacteria | 13710 |
| 62 | Ga0068862_100002601 | 3300005844 | Bacteria | 15909 |
| 63 | Ga0068862_100022303 | 3300005844 | Bacteria | 5295 |
| 64 | Ga0081455_10007750 | 3300005937 | Bacteria | 11258 |
| 65 | Ga0081539_10000383 | 3300005985 | Bacteria | 95995 |
| 66 | Ga0070717_10000127 | 3300006028 | Bacteria | 56161 |
| 67 | Ga0097621_100000383 | 3300006237 | Bacteria | 30887 |
| 68 | Ga0068871_100000553 | 3300006358 | Bacteria | 25508 |
| 69 | Ga0075428_100045556 | 3300006844 | Unclassified | 4819 |
| 70 | Ga0075430_100007811 | 3300006846 | Bacteria | 9038 |
| 71 | Ga0075430_100029213 | 3300006846 | Bacteria | 4680 |
| 72 | Ga0075431_100005113 | 3300006847 | Bacteria | 12906 |
| 73 | Ga0075431_100025783 | 3300006847 | Bacteria | 6026 |
| 74 | Ga0075434_100000023 | 3300006871 | Bacteria | 68942 |
| 75 | Ga0075436_100000624 | 3300006914 | Bacteria | 23244 |
| 76 | Ga0075436_100003176 | 3300006914 | Bacteria | 11270 |
| 77 | Ga0075436_100007505 | 3300006914 | Bacteria | 7450 |
| 78 | Ga0075436_100024488 | 3300006914 | Bacteria | 4149 |
| 79 | Ga0097620_100000339 | 3300006931 | Bacteria | 46761 |
| 80 | Ga0075435_100000037 | 3300007076 | Bacteria | 68955 |
| 81 | Ga0075435_100002734 | 3300007076 | Bacteria | 11779 |
| 82 | Ga0075435_100018210 | 3300007076 | Bacteria | 5333 |
| 83 | Ga0111539_10000025 | 3300009094 | Bacteria | 188514 |
| 84 | Ga0111539_10012746 | 3300009094 | Bacteria | 10525 |
| 85 | Ga0111539_10030536 | 3300009094 | Bacteria | 6549 |
| 86 | Ga0105245_10000005 | 3300009098 | Bacteria | 335871 |
| 87 | Ga0105245_10034566 | 3300009098 | Bacteria | 4484 |
| 88 | Ga0114129_10006558 | 3300009147 | Bacteria | 16519 |
| 89 | Ga0114129_10049948 | 3300009147 | Bacteria | 5876 |
| 90 | Ga0114129_10096728 | 3300009147 | Bacteria | 4087 |
| 91 | Ga0105243_10007169 | 3300009148 | Bacteria | 8573 |
| 92 | Ga0105242_10010074 | 3300009176 | Bacteria | 7238 |
| 93 | Ga0105248_10009152 | 3300009177 | Bacteria | 10893 |
| 94 | Ga0105248_10016095 | 3300009177 | Bacteria | 8229 |
| 95 | Ga0105248_10018090 | 3300009177 | Bacteria | 7780 |
| 96 | Ga0105248_10024229 | 3300009177 | Bacteria | 6747 |
| 97 | Ga0105238_10002893 | 3300009551 | Bacteria | 17149 |
| 98 | Ga0157378_10000435 | 3300013297 | Bacteria | 40721 |
| 99 | Ga0157378_10000747 | 3300013297 | Bacteria | 30444 |
| 100 | Ga0157378_10015029 | 3300013297 | Bacteria | 6778 |
| 101 | Ga0157378_10031673 | 3300013297 | Bacteria | 4671 |
| 102 | Ga0163162_10011987 | 3300013306 | Bacteria | 8455 |
| 103 | Ga0163162_10037784 | 3300013306 | Bacteria | 4819 |
| 104 | Ga0157375_10000005 | 3300013308 | Bacteria | 429412 |
| 105 | Ga0157375_10000043 | 3300013308 | Bacteria | 157537 |
| 106 | Ga0157375_10000053 | 3300013308 | Bacteria | 128672 |
| 107 | Ga0157375_10005231 | 3300013308 | Bacteria | 11263 |
| 108 | Ga0157375_10009644 | 3300013308 | Bacteria | 8486 |
| 109 | Ga0157375_10031776 | 3300013308 | Bacteria | 4998 |
| 110 | Ga0163163_10005240 | 3300014325 | Bacteria | 11182 |
| 111 | Ga0157380_10009214 | 3300014326 | Bacteria | 7064 |
| 112 | Ga0157380_10012591 | 3300014326 | Bacteria | 6137 |
| 113 | Ga0157380_10022603 | 3300014326 | Bacteria | 4739 |
| 114 | Ga0157377_10000065 | 3300014745 | Bacteria | 80952 |
| 115 | Ga0157379_10002205 | 3300014968 | Bacteria | 16207 |
| 116 | Ga0157376_10009946 | 3300014969 | Bacteria | 6938 |
| 117 | Ga0213873_10000001 | 3300021358 | Bacteria | 1657979 |
| 118 | Ga0213876_10000002 | 3300021384 | Bacteria | 1168769 |
| 119 | Ga0207697_10007042 | 3300025315 | Bacteria | 5036 |
| 120 | Ga0207688_10011999 | 3300025901 | Bacteria | 4716 |
| 121 | Ga0207680_10018704 | 3300025903 | Bacteria | 3690 |
| 122 | Ga0207645_10001021 | 3300025907 | Bacteria | 23141 |
| 123 | Ga0207705_10008286 | 3300025909 | Bacteria | 7593 |
| 124 | Ga0207684_10000055 | 3300025910 | Bacteria | 216970 |
| 125 | Ga0207684_10000829 | 3300025910 | Bacteria | 35583 |
| 126 | Ga0207684_10013574 | 3300025910 | Bacteria | 7042 |
| 127 | Ga0207646_10005030 | 3300025922 | Bacteria | 14069 |
| 128 | Ga0207659_10000424 | 3300025926 | Bacteria | 25485 |
| 129 | Ga0207687_10000005 | 3300025927 | Bacteria | 770649 |
| 130 | Ga0207644_10010007 | 3300025931 | Bacteria | 6243 |
| 131 | Ga0207644_10010093 | 3300025931 | Bacteria | 6220 |
| 132 | Ga0207669_10014531 | 3300025937 | Bacteria | 3949 |
| 133 | Ga0207691_10009003 | 3300025940 | Bacteria | 9572 |
| 134 | Ga0207691_10020890 | 3300025940 | Bacteria | 6186 |
| 135 | Ga0207711_10000303 | 3300025941 | Bacteria | 52820 |
| 136 | Ga0207711_10001057 | 3300025941 | Bacteria | 26362 |
| 137 | Ga0207689_10046153 | 3300025942 | Bacteria | 3602 |
| 138 | Ga0207658_10002940 | 3300025986 | Bacteria | 12204 |
| 139 | Ga0207678_10003285 | 3300026067 | Bacteria | 14586 |
| 140 | Ga0207708_10021170 | 3300026075 | Bacteria | 4904 |
| 141 | Ga0207648_10005706 | 3300026089 | Bacteria | 12475 |
| 142 | Ga0207676_10000002 | 3300026095 | Bacteria | 1198607 |
| 143 | Ga0207676_10000090 | 3300026095 | Bacteria | 82212 |
| 144 | Ga0207676_10015470 | 3300026095 | Bacteria | 5504 |
| 145 | Ga0207674_10016896 | 3300026116 | Bacteria | 7972 |
| 146 | Ga0207675_100000537 | 3300026118 | Bacteria | 36958 |
| 147 | Ga0207683_10050459 | 3300026121 | Bacteria | 3645 |
| 148 | Ga0207428_10000012 | 3300027907 | Bacteria | 354383 |
| 149 | Ga0268265_10000307 | 3300028380 | Bacteria | 54460 |
| 150 | Ga0268264_10003923 | 3300028381 | Bacteria | 12740 |
| 151 | Ga0265337_1003553 | 3300028556 | Bacteria | 6719 |
| 152 | Ga0265323_10003836 | 3300028653 | Bacteria | 6549 |
| 153 | Ga0265330_10000387 | 3300031235 | Bacteria | 30562 |
| 154 | Ga0265330_10001617 | 3300031235 | Bacteria | 12848 |
| 155 | Ga0265330_10007770 | 3300031235 | Bacteria | 5207 |
| 156 | Ga0265325_10002681 | 3300031241 | Bacteria | 11915 |
| 157 | Ga0265329_10000257 | 3300031242 | Bacteria | 28312 |
| 158 | Ga0265340_10000076 | 3300031247 | Bacteria | 47300 |
| 159 | Ga0265316_10002676 | 3300031344 | Bacteria | 18352 |
| 160 | Ga0265316_10003906 | 3300031344 | Bacteria | 14933 |
| 161 | Ga0265316_10019357 | 3300031344 | Bacteria | 5824 |
| 162 | Ga0265314_10000030 | 3300031711 | Bacteria | 266231 |
| 163 | Ga0265314_10002977 | 3300031711 | Bacteria | 16790 |
| 164 | Ga0265342_10000103 | 3300031712 | Bacteria | 94172 |
| 165 | Ga0265342_10000437 | 3300031712 | Bacteria | 45519 |
| 166 | Ga0373929_0000008 | 3300035085 | Bacteria | 298561 |
| 167 | Ga0373932_0000648 | 3300035112 | Bacteria | 10569 |
| 168 | Ga0373931_0011561 | 3300035691 | Bacteria | 4265 |
| 169 | Ga0373927_0006035 | 3300035695 | Bacteria | 8299 |
| 170 | Ga0436365_0693404 | 3300039437 | Bacteria | 102624 |
| 171 | Ga0436362_0984254 | 3300039453 | Bacteria | 405590 |
| 172 | Ga0451577_0018599 | 3300042876 | Bacteria | 6398 |
| 173 | Ga0451577_0020026 | 3300042876 | Bacteria | 6144 |
| 174 | Ga0453684_0009745 | 3300044712 | Bacteria | 16684 |
| 175 | Ga0495620_0000133 | 3300046515 | Bacteria | 60765 |
| 176 | Ga0495586_0005851 | 3300046535 | Bacteria | 6571 |
| 177 | Ga0495621_0010109 | 3300046539 | Bacteria | 2880 |
| 178 | Ga0496112_0083686 | 3300048915 | Bacteria | 3156 |
| 179 | Ga0501034_0034370 | 3300049571 | Bacteria | 5139 |
| 180 | Ga0501073_0003668 | 3300049589 | Bacteria | 11533 |
| 181 | Ga0501073_0036880 | 3300049589 | Unclassified | 3472 |
| 182 | Ga0501075_0044837 | 3300049591 | Bacteria | 3318 |
| 183 | Ga0501080_0004807 | 3300049742 | Bacteria | 12045 |
| 184 | Ga0501083_0004387 | 3300049744 | Bacteria | 9949 |
| 185 | nmdc:mga05p37_12585_c1 | 3300050507 | Bacteria | 10104 |
| 186 | nmdc:mga05p37_20851_c2 | 3300050507 | Bacteria | 5190 |
| 187 | nmdc:mga0qj67_22343_c1 | 3300050509 | Bacteria | 4861 |
| 188 | nmdc:mga0qj67_4997_c1 | 3300050509 | Bacteria | 9638 |
| 189 | nmdc:mga06r32_4416_c1 | 3300050510 | Bacteria | 12580 |
| 190 | nmdc:mga06r32_708_c1 | 3300050510 | Bacteria | 29154 |
| 191 | nmdc:mga08y16_50898_c1 | 3300050511 | Bacteria | 4334 |
| 192 | nmdc:mga08y16_7_c1 | 3300050511 | Bacteria | 610289 |
| 193 | nmdc:mga08y16_9751_c1 | 3300050511 | Bacteria | 10087 |
| 194 | nmdc:mga0n895_4_c1 | 3300050512 | Bacteria | 133851 |
| 195 | nmdc:mga0rr50_4_c1 | 3300050513 | Bacteria | 338870 |
| 196 | nmdc:mga0rr50_96_c1 | 3300050513 | Bacteria | 49211 |
| 197 | nmdc:mga08x19_102_c1 | 3300050514 | Bacteria | 75432 |
| 198 | nmdc:mga08x19_377_c1 | 3300050514 | Bacteria | 31229 |
| 199 | nmdc:mga08x19_6036_c1 | 3300050514 | Bacteria | 7159 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046539 | Ga0495621_0010109 | Ga0495621_0010109_409_2853 | 796 |
| 2 | 3300049571 | Ga0501034_0034370 | Ga0501034_0034370_2315_5113 | 867 |
| 3 | 3300049591 | Ga0501075_0044837 | Ga0501075_0044837_13_2946 | 874 |
| 4 | 3300048915 | Ga0496112_0083686 | Ga0496112_0083686_396_3119 | 893 |
| 5 | 3300006844 | Ga0075428_100045556 | Ga0075428_1000455563 | 918 |
| 6 | 3300006847 | Ga0075431_100005113 | Ga0075431_1000051136 | 922 |
| 7 | 3300050510 | nmdc:mga06r32_4416_c1 | nmdc:mga06r32_4416_c1_3805_6780 | 922 |
| 8 | 3300005543 | Ga0070672_100004719 | Ga0070672_1000047197 | 931 |
| 9 | 3300005337 | Ga0070682_100000082 | Ga0070682_10000008258 | 935 |
| 10 | 3300006847 | Ga0075431_100005113 | Ga0075431_1000051135 | 937 |
| 11 | 3300050510 | nmdc:mga06r32_4416_c1 | nmdc:mga06r32_4416_c1_6791_9769 | 938 |
| 12 | 3300005618 | Ga0068864_100000001 | Ga0068864_100000001383 | 940 |
| 13 | 3300026095 | Ga0207676_10000002 | Ga0207676_10000002451 | 940 |
| 14 | 3300050511 | nmdc:mga08y16_50898_c1 | nmdc:mga08y16_50898_c1_1325_4297 | 941 |
| 15 | 3300009551 | Ga0105238_10002893 | Ga0105238_100028934 | 947 |
| 16 | 3300005471 | Ga0070698_100050923 | Ga0070698_1000509232 | 948 |
| 17 | 3300046535 | Ga0495586_0005851 | Ga0495586_0005851_1839_5108 | 948 |
| 18 | 3300050509 | nmdc:mga0qj67_22343_c1 | nmdc:mga0qj67_22343_c1_1417_4842 | 953 |
| 19 | 3300013308 | Ga0157375_10000005 | Ga0157375_10000005267 | 954 |
| 20 | 3300006914 | Ga0075436_100007505 | Ga0075436_1000075053 | 955 |
| 21 | 3300007076 | Ga0075435_100002734 | Ga0075435_1000027342 | 955 |
| 22 | 3300050513 | nmdc:mga0rr50_96_c1 | nmdc:mga0rr50_96_c1_823_3834 | 955 |
| 23 | 3300050514 | nmdc:mga08x19_377_c1 | nmdc:mga08x19_377_c1_25817_28828 | 955 |
| 24 | 3300006846 | Ga0075430_100029213 | Ga0075430_1000292132 | 957 |
| 25 | 3300021358 | Ga0213873_10000001 | Ga0213873_10000001651 | 962 |
| 26 | 3300021384 | Ga0213876_10000002 | Ga0213876_10000002891 | 962 |
| 27 | 3300039437 | Ga0436365_0693404 | Ga0436365_0693404_54730_57795 | 962 |
| 28 | 3300039453 | Ga0436362_0984254 | Ga0436362_0984254_301477_304542 | 962 |
| 29 | 3300005445 | Ga0070708_100019288 | Ga0070708_1000192884 | 963 |
| 30 | 3300005467 | Ga0070706_100004265 | Ga0070706_1000042656 | 963 |
| 31 | 3300006871 | Ga0075434_100000023 | Ga0075434_10000002337 | 963 |
| 32 | 3300006914 | Ga0075436_100000624 | Ga0075436_1000006244 | 963 |
| 33 | 3300007076 | Ga0075435_100000037 | Ga0075435_10000003728 | 963 |
| 34 | 3300050512 | nmdc:mga0n895_4_c1 | nmdc:mga0n895_4_c1_92982_96239 | 963 |
| 35 | 3300050513 | nmdc:mga0rr50_4_c1 | nmdc:mga0rr50_4_c1_88859_92116 | 963 |
| 36 | 3300050514 | nmdc:mga08x19_102_c1 | nmdc:mga08x19_102_c1_69936_73193 | 963 |
| 37 | 3300013297 | Ga0157378_10000747 | Ga0157378_1000074718 | 964 |
| 38 | 3300026116 | Ga0207674_10016896 | Ga0207674_100168964 | 964 |
| 39 | 3300005327 | Ga0070658_10001949 | Ga0070658_100019495 | 966 |
| 40 | 3300013297 | Ga0157378_10000435 | Ga0157378_100004359 | 966 |
| 41 | 3300025909 | Ga0207705_10008286 | Ga0207705_100082863 | 966 |
| 42 | 3300005436 | Ga0070713_100020873 | Ga0070713_1000208732 | 967 |
| 43 | 3300006028 | Ga0070717_10000127 | Ga0070717_100001277 | 967 |
| 44 | 3300014326 | Ga0157380_10012591 | Ga0157380_100125913 | 967 |
| 45 | 3300006846 | Ga0075430_100007811 | Ga0075430_1000078115 | 969 |
| 46 | 3300050509 | nmdc:mga0qj67_4997_c1 | nmdc:mga0qj67_4997_c1_3567_6683 | 969 |
| 47 | 3300005843 | Ga0068860_100002317 | Ga0068860_10000231718 | 971 |
| 48 | 3300028381 | Ga0268264_10003923 | Ga0268264_100039232 | 971 |
| 49 | 3300035112 | Ga0373932_0000648 | Ga0373932_0000648_6102_9227 | 971 |
| 50 | 3300005844 | Ga0068862_100002601 | Ga0068862_10000260110 | 973 |
| 51 | 3300028380 | Ga0268265_10000307 | Ga0268265_100003077 | 973 |
| 52 | 3300005547 | Ga0070693_100009041 | Ga0070693_1000090411 | 974 |
| 53 | 3300013308 | Ga0157375_10000043 | Ga0157375_1000004327 | 974 |
| 54 | 3300005438 | Ga0070701_10000479 | Ga0070701_100004797 | 975 |
| 55 | 3300025940 | Ga0207691_10020890 | Ga0207691_100208902 | 975 |
| 56 | 3300026121 | Ga0207683_10050459 | Ga0207683_100504591 | 975 |
| 57 | 3300005518 | Ga0070699_100011729 | Ga0070699_1000117293 | 978 |
| 58 | 3300006914 | Ga0075436_100024488 | Ga0075436_1000244882 | 978 |
| 59 | 3300031235 | Ga0265330_10000387 | Ga0265330_100003873 | 979 |
| 60 | 3300042876 | Ga0451577_0020026 | Ga0451577_0020026_144_3341 | 979 |
| 61 | 3300006237 | Ga0097621_100000383 | Ga0097621_1000003837 | 980 |
| 62 | 3300006358 | Ga0068871_100000553 | Ga0068871_1000005536 | 980 |
| 63 | 3300031344 | Ga0265316_10019357 | Ga0265316_100193572 | 982 |
| 64 | 3300006847 | Ga0075431_100025783 | Ga0075431_1000257832 | 983 |
| 65 | 3300014745 | Ga0157377_10000065 | Ga0157377_1000006567 | 983 |
| 66 | 3300046515 | Ga0495620_0000133 | Ga0495620_0000133_50645_53722 | 983 |
| 67 | 3300050510 | nmdc:mga06r32_708_c1 | nmdc:mga06r32_708_c1_732_3812 | 983 |
| 68 | 3300005445 | Ga0070708_100003388 | Ga0070708_1000033885 | 984 |
| 69 | 3300005548 | Ga0070665_100010940 | Ga0070665_1000109402 | 986 |
| 70 | 3300009098 | Ga0105245_10000005 | Ga0105245_10000005259 | 987 |
| 71 | 3300025927 | Ga0207687_10000005 | Ga0207687_10000005140 | 987 |
| 72 | 3300014326 | Ga0157380_10009214 | Ga0157380_100092141 | 989 |
| 73 | 3300005345 | Ga0070692_10005166 | Ga0070692_100051662 | 990 |
| 74 | 3300005937 | Ga0081455_10007750 | Ga0081455_100077503 | 990 |
| 75 | 3300028556 | Ga0265337_1003553 | Ga0265337_10035532 | 990 |
| 76 | 3300031241 | Ga0265325_10002681 | Ga0265325_100026814 | 990 |
| 77 | 3300031247 | Ga0265340_10000076 | Ga0265340_100000767 | 990 |
| 78 | 3300031711 | Ga0265314_10000030 | Ga0265314_10000030187 | 990 |
| 79 | 3300031712 | Ga0265342_10000437 | Ga0265342_1000043718 | 990 |
| 80 | 3300005468 | Ga0070707_100025447 | Ga0070707_1000254476 | 991 |
| 81 | 3300005471 | Ga0070698_100017806 | Ga0070698_1000178063 | 993 |
| 82 | 3300025942 | Ga0207689_10046153 | Ga0207689_100461532 | 993 |
| 83 | 3300049744 | Ga0501083_0004387 | Ga0501083_0004387_6263_9364 | 993 |
| 84 | 3300009094 | Ga0111539_10000025 | Ga0111539_1000002530 | 994 |
| 85 | 3300027907 | Ga0207428_10000012 | Ga0207428_10000012255 | 994 |
| 86 | 3300050511 | nmdc:mga08y16_7_c1 | nmdc:mga08y16_7_c1_331536_334751 | 994 |
| 87 | 3300025922 | Ga0207646_10005030 | Ga0207646_100050305 | 995 |
| 88 | 3300005549 | Ga0070704_100002054 | Ga0070704_1000020545 | 996 |
| 89 | 3300005578 | Ga0068854_100020320 | Ga0068854_1000203202 | 996 |
| 90 | 3300025907 | Ga0207645_10001021 | Ga0207645_1000102112 | 996 |
| 91 | 3300026089 | Ga0207648_10005706 | Ga0207648_100057064 | 996 |
| 92 | 3300026118 | Ga0207675_100000537 | Ga0207675_10000053727 | 996 |
| 93 | 3300035695 | Ga0373927_0006035 | Ga0373927_0006035_2933_6088 | 996 |
| 94 | 3300005356 | Ga0070674_100021609 | Ga0070674_1000216091 | 997 |
| 95 | 3300028653 | Ga0265323_10003836 | Ga0265323_100038363 | 998 |
| 96 | 3300031242 | Ga0265329_10000257 | Ga0265329_1000025722 | 998 |
| 97 | 3300031344 | Ga0265316_10003906 | Ga0265316_100039068 | 998 |
| 98 | 3300031712 | Ga0265342_10000103 | Ga0265342_100001034 | 998 |
| 99 | 3300005354 | Ga0070675_100001561 | Ga0070675_1000015611 | 999 |
| 100 | 3300025926 | Ga0207659_10000424 | Ga0207659_100004242 | 999 |
| 101 | 3300049742 | Ga0501080_0004807 | Ga0501080_0004807_4503_7715 | 1000 |
| 102 | 3300009177 | Ga0105248_10009152 | Ga0105248_100091527 | 1001 |
| 103 | 3300005444 | Ga0070694_100021030 | Ga0070694_1000210302 | 1002 |
| 104 | 3300005545 | Ga0070695_100002167 | Ga0070695_1000021672 | 1002 |
| 105 | 3300009148 | Ga0105243_10007169 | Ga0105243_100071694 | 1002 |
| 106 | 3300014326 | Ga0157380_10022603 | Ga0157380_100226032 | 1002 |
| 107 | 3300005618 | Ga0068864_100000104 | Ga0068864_10000010437 | 1003 |
| 108 | 3300007076 | Ga0075435_100018210 | Ga0075435_1000182102 | 1003 |
| 109 | 3300009098 | Ga0105245_10034566 | Ga0105245_100345661 | 1003 |
| 110 | 3300013308 | Ga0157375_10000053 | Ga0157375_1000005385 | 1003 |
| 111 | 3300026095 | Ga0207676_10000090 | Ga0207676_1000009035 | 1003 |
| 112 | 3300035085 | Ga0373929_0000008 | Ga0373929_0000008_149434_152673 | 1003 |
| 113 | 3300005327 | Ga0070658_10005207 | Ga0070658_100052074 | 1004 |
| 114 | 3300006914 | Ga0075436_100003176 | Ga0075436_1000031765 | 1004 |
| 115 | 3300025931 | Ga0207644_10010093 | Ga0207644_100100932 | 1004 |
| 116 | 3300005842 | Ga0068858_100010843 | Ga0068858_1000108433 | 1005 |
| 117 | 3300009177 | Ga0105248_10016095 | Ga0105248_100160951 | 1005 |
| 118 | 3300014325 | Ga0163163_10005240 | Ga0163163_100052407 | 1005 |
| 119 | 3300025941 | Ga0207711_10001057 | Ga0207711_100010574 | 1005 |
| 120 | 3300026095 | Ga0207676_10015470 | Ga0207676_100154703 | 1005 |
| 121 | 3300031235 | Ga0265330_10007770 | Ga0265330_100077703 | 1005 |
| 122 | 3300031344 | Ga0265316_10002676 | Ga0265316_100026763 | 1005 |
| 123 | 3300031711 | Ga0265314_10002977 | Ga0265314_1000297712 | 1005 |
| 124 | 3300005330 | Ga0070690_100000219 | Ga0070690_10000021921 | 1006 |
| 125 | 3300005335 | Ga0070666_10002149 | Ga0070666_100021496 | 1006 |
| 126 | 3300005367 | Ga0070667_100001693 | Ga0070667_10000169317 | 1006 |
| 127 | 3300005543 | Ga0070672_100013810 | Ga0070672_1000138102 | 1006 |
| 128 | 3300005549 | Ga0070704_100006529 | Ga0070704_1000065294 | 1006 |
| 129 | 3300005614 | Ga0068856_100014348 | Ga0068856_1000143483 | 1006 |
| 130 | 3300005617 | Ga0068859_100000339 | Ga0068859_10000033923 | 1006 |
| 131 | 3300005842 | Ga0068858_100016541 | Ga0068858_1000165413 | 1006 |
| 132 | 3300005843 | Ga0068860_100004853 | Ga0068860_1000048535 | 1006 |
| 133 | 3300006931 | Ga0097620_100000339 | Ga0097620_10000033923 | 1006 |
| 134 | 3300009177 | Ga0105248_10024229 | Ga0105248_100242292 | 1006 |
| 135 | 3300013297 | Ga0157378_10015029 | Ga0157378_100150292 | 1006 |
| 136 | 3300013308 | Ga0157375_10005231 | Ga0157375_100052315 | 1006 |
| 137 | 3300014968 | Ga0157379_10002205 | Ga0157379_1000220510 | 1006 |
| 138 | 3300014969 | Ga0157376_10009946 | Ga0157376_100099465 | 1006 |
| 139 | 3300025941 | Ga0207711_10000303 | Ga0207711_1000030328 | 1006 |
| 140 | 3300025986 | Ga0207658_10002940 | Ga0207658_1000294011 | 1006 |
| 141 | 3300026067 | Ga0207678_10003285 | Ga0207678_1000328513 | 1006 |
| 142 | 3300005438 | Ga0070701_10017470 | Ga0070701_100174701 | 1007 |
| 143 | 3300005467 | Ga0070706_100000062 | Ga0070706_10000006237 | 1007 |
| 144 | 3300005468 | Ga0070707_100000623 | Ga0070707_10000062325 | 1007 |
| 145 | 3300025910 | Ga0207684_10000055 | Ga0207684_1000005538 | 1007 |
| 146 | 3300035691 | Ga0373931_0011561 | Ga0373931_0011561_939_4094 | 1007 |
| 147 | 3300042876 | Ga0451577_0018599 | Ga0451577_0018599_2028_5201 | 1008 |
| 148 | 3300044712 | Ga0453684_0009745 | Ga0453684_0009745_9305_12478 | 1008 |
| 149 | 3300005536 | Ga0070697_100002077 | Ga0070697_10000207711 | 1009 |
| 150 | 3300009176 | Ga0105242_10010074 | Ga0105242_100100745 | 1009 |
| 151 | 3300005467 | Ga0070706_100002351 | Ga0070706_10000235113 | 1010 |
| 152 | 3300005471 | Ga0070698_100001108 | Ga0070698_10000110823 | 1010 |
| 153 | 3300005844 | Ga0068862_100022303 | Ga0068862_1000223033 | 1010 |
| 154 | 3300025910 | Ga0207684_10000829 | Ga0207684_100008296 | 1010 |
| 155 | 3300026075 | Ga0207708_10021170 | Ga0207708_100211703 | 1010 |
| 156 | 3300049589 | Ga0501073_0036880 | Ga0501073_0036880_291_3449 | 1010 |
| 157 | 3300050514 | nmdc:mga08x19_6036_c1 | nmdc:mga08x19_6036_c1_197_3343 | 1010 |
| 158 | 3300005471 | Ga0070698_100000024 | Ga0070698_10000002471 | 1011 |
| 159 | 3300049589 | Ga0501073_0003668 | Ga0501073_0003668_1862_5068 | 1012 |
| 160 | 3300005329 | Ga0070683_100013453 | Ga0070683_1000134533 | 1014 |
| 161 | 3300005518 | Ga0070699_100054627 | Ga0070699_1000546271 | 1014 |
| 162 | 3300005546 | Ga0070696_100008820 | Ga0070696_1000088202 | 1014 |
| 163 | 3300009147 | Ga0114129_10049948 | Ga0114129_100499484 | 1014 |
| 164 | 3300009147 | Ga0114129_10096728 | Ga0114129_100967282 | 1014 |
| 165 | 3300031235 | Ga0265330_10001617 | Ga0265330_100016175 | 1014 |
| 166 | 3300009147 | Ga0114129_10006558 | Ga0114129_100065584 | 1015 |
| 167 | 3300050507 | nmdc:mga05p37_12585_c1 | nmdc:mga05p37_12585_c1_619_3774 | 1015 |
| 168 | 3300009094 | Ga0111539_10012746 | Ga0111539_100127464 | 1017 |
| 169 | 3300009094 | Ga0111539_10030536 | Ga0111539_100305362 | 1017 |
| 170 | 3300050511 | nmdc:mga08y16_9751_c1 | nmdc:mga08y16_9751_c1_3423_6599 | 1017 |
| 171 | 3300005367 | Ga0070667_100013596 | Ga0070667_1000135962 | 1018 |
| 172 | 3300009177 | Ga0105248_10018090 | Ga0105248_100180902 | 1018 |
| 173 | 3300050507 | nmdc:mga05p37_20851_c2 | nmdc:mga05p37_20851_c2_1030_4257 | 1019 |
| 174 | 3300005331 | Ga0070670_100011781 | Ga0070670_1000117812 | 1041 |
| 175 | 3300005331 | Ga0070670_100030923 | Ga0070670_1000309232 | 1046 |
| 176 | 3300005338 | Ga0068868_100015407 | Ga0068868_1000154072 | 1046 |
| 177 | 3300005347 | Ga0070668_100006630 | Ga0070668_1000066303 | 1046 |
| 178 | 3300005353 | Ga0070669_100005719 | Ga0070669_1000057192 | 1046 |
| 179 | 3300005355 | Ga0070671_100007571 | Ga0070671_1000075712 | 1046 |
| 180 | 3300005356 | Ga0070674_100030969 | Ga0070674_1000309691 | 1046 |
| 181 | 3300005364 | Ga0070673_100001663 | Ga0070673_1000016639 | 1046 |
| 182 | 3300005365 | Ga0070688_100013732 | Ga0070688_1000137322 | 1046 |
| 183 | 3300005367 | Ga0070667_100012923 | Ga0070667_1000129237 | 1046 |
| 184 | 3300005543 | Ga0070672_100004883 | Ga0070672_10000488310 | 1046 |
| 185 | 3300013297 | Ga0157378_10031673 | Ga0157378_100316732 | 1046 |
| 186 | 3300013306 | Ga0163162_10037784 | Ga0163162_100377842 | 1046 |
| 187 | 3300013308 | Ga0157375_10031776 | Ga0157375_100317761 | 1046 |
| 188 | 3300025315 | Ga0207697_10007042 | Ga0207697_100070422 | 1046 |
| 189 | 3300025901 | Ga0207688_10011999 | Ga0207688_100119991 | 1046 |
| 190 | 3300025903 | Ga0207680_10018704 | Ga0207680_100187042 | 1046 |
| 191 | 3300025931 | Ga0207644_10010007 | Ga0207644_100100072 | 1046 |
| 192 | 3300025937 | Ga0207669_10014531 | Ga0207669_100145312 | 1046 |
| 193 | 3300025940 | Ga0207691_10009003 | Ga0207691_100090037 | 1046 |
| 194 | 3300005335 | Ga0070666_10010268 | Ga0070666_100102683 | 1048 |
| 195 | 3300005355 | Ga0070671_100005641 | Ga0070671_1000056414 | 1048 |
| 196 | 3300005467 | Ga0070706_100010191 | Ga0070706_1000101917 | 1048 |
| 197 | 3300013306 | Ga0163162_10011987 | Ga0163162_100119875 | 1048 |
| 198 | 3300013308 | Ga0157375_10009644 | Ga0157375_100096443 | 1048 |
| 199 | 3300025910 | Ga0207684_10013574 | Ga0207684_100135744 | 1048 |
| 200 | 3300003203 | JGI25406J46586_10000016 | JGI25406J46586_1000001666 | 1054 |
| 201 | 3300005985 | Ga0081539_10000383 | Ga0081539_1000038373 | 1054 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1xj5-assembly1.cif.gz_C | x-ray structure of spermidine synthase from arabidopsis thaliana gene at1g23820 | 0.9087 | 488 | 697 |
| 6o64-assembly1.cif.gz_B | crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) | 0.9046 | 489 | 697 |
| 6o64-assembly1.cif.gz_A | crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) | 0.9042 | 488 | 701 |
| 8iyi-assembly1.cif.gz_A | spermidine synthase from kluyveromyces lactis | 0.8989 | 489 | 696 |
| 3b7p-assembly1.cif.gz_A | crystal structure of spermidine synthase from plasmodium falciparum in complex with spermine | 0.8975 | 488 | 696 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_B4E3X6_90_272_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9116 | 523 | 699 | 3.40.50.150 |
| 1jq3D01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.889 | 522 | 696 | 3.40.50.150 |
| af_B4E3X6_90_272_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8788 | 523 | 699 | 3.40.50.150 |
| 1inlB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8497 | 522 | 703 | 3.40.50.150 |
| 1jq3D01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8398 | 522 | 696 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A832US61-F1-model_v4 | PABS domain-containing protein | 0.9656 | 490 | 655 |
GO:0004766
GO:0005829 GO:0008295 |
| AF-A0A3M2BP26-F1-model_v4 | Spermidine synthase | 0.946 | 226 | 1046 |
GO:0006596
GO:0016020 GO:0016740 |
| AF-A0A2V6AV48-F1-model_v4 | Spermidine synthase | 0.9339 | 9 | 190 |
GO:0016020
|
| AF-A0A3M2BP26-F1-model_v4 | Spermidine synthase | 0.9338 | 226 | 1046 |
GO:0006596
GO:0016020 GO:0016740 |
| AF-A0A2V6AV48-F1-model_v4 | Spermidine synthase | 0.9147 | 9 | 190 |
GO:0016020
|
Predicted Structure (AlphaFold2)
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