F307875

General Info

Members Datasets Scaffolds Average Seq Length
200 163 400 569

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2515154155|2515851879
Length 613
Sequence KPDGIDAGMLRKSQHDLRLFGLVLRPVSASTRKAAVLIRLLRAYLRPYARPITLVVVLQLLQTLATLYLPTLNADIIDNGVVRGDIGYIMRTGGVMLAVTLVQILCACAAVYVGARTAMALGRDVRAAIFGRVQDFSIREVGQFGAPSLITRTTNDVQQVQMLVLMTLTLMVSAPIMCVGGILMALNLDVPLSALLLVVVPVLILAVSLIIRRMRPLFRAMQERIDMVNRVMREQISGIRVIRAFVRDEHEHARFAGANTELMSVSLGVGRLMALMFPTVMAVMNLSSVAVMWFGAHRIDAGSMQIGALTAFLSYLMQILMSVMMATFMFVMVPRAEVCAERIQEVLDTESSVTVAPRPVTELRGGGHLEIRDVDFRYPGAEESVLRGISLVARLGQMTAVIGSTGSGKTTLLNLVPRLFDATGGAVLVNGVDVRELDPAVLARTVGLVPQKPYLFSGTIASNLRYGNPDATDEELWRALDVAQARDFVGQLSEGLEAPIGQGGSNVSGGQRQRLAIARVLVAQPRIYLFDDSFSAVDYATDAALRAALARETSDATVVVVAQRVSTIRHADRIIVLDEGEVVGTGTHEELMAANQTYREIVLSQLTEQEAAS

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
3 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
4 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
5 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
6 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
7 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
8 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
9 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
10 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
11 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
12 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
13 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
15 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
16 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
17 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
18 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
26 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
27 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
28 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
29 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
30 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
31 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
32 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
33 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
34 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
35 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
36 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
37 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
38 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
39 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
40 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
41 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
42 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
43 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
44 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
45 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
46 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
53 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
54 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
57 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
58 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
59 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
60 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
61 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
62 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
63 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
64 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
65 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
66 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
67 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
68 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
69 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
70 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
71 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
72 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
73 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
76 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
79 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
95 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
96 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
97 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
98 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
99 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
100 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
101 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
102 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
103 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
104 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
105 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
106 2643221566 Microbacterium sp. Root166 Isolate Unclassified
107 2643221575 Microbacterium sp. Root61 Isolate Unclassified
108 2643221578 Streptomyces sp. Root63 Isolate Unclassified
109 2643221597 Microbacterium sp. Root180 Isolate Unclassified
110 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
111 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
112 2643221714 Streptomyces sp. Root264 Isolate Unclassified
113 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
114 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
115 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
116 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
117 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
118 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
119 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
120 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
121 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
122 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
123 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
124 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
125 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
126 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
127 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
128 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
129 2862574272 Streptomyces sp. AcE210 Isolate Nodule
130 2867475112 Streptomyces sp. TM32 Isolate Unclassified
131 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
132 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
133 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
134 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
135 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
136 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
137 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
138 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
139 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
140 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
141 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
142 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
143 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
144 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
145 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
146 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
147 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
148 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
149 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
150 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
151 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
152 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
153 8002775197 Frankia nepalensis CN7 Isolate Nodule
154 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
155 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
156 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
157 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
158 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
159 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
160 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
161 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
162 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
163 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 68
Metatranscriptomes 0
Isolates 32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3
Nodule 1
Rhizoplane 7
Rhizosphere 68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100082151 3300005339 Bacteria 2530
2 Ga0070663_100000117 3300005455 Bacteria 37277
3 Ga0070681_10104232 3300005458 Bacteria 2779
4 Ga0070706_100007510 3300005467 Bacteria 10218
5 Ga0070707_100018983 3300005468 Bacteria 6476
6 Ga0068859_100001804 3300005617 Bacteria 21793
7 Ga0068863_100000441 3300005841 Bacteria 42020
8 Ga0070717_10114159 3300006028 Bacteria 2307
9 Ga0075428_100002531 3300006844 Bacteria 19875
10 Ga0075430_100038028 3300006846 Bacteria 4078
11 Ga0075431_100044176 3300006847 Bacteria 4596
12 Ga0075429_100003881 3300006880 Bacteria 12772
13 Ga0097620_100001804 3300006931 Bacteria 21793
14 Ga0114129_10000517 3300009147 Bacteria 47115
15 Ga0105243_10017737 3300009148 Bacteria 5385
16 Ga0105243_10032852 3300009148 Bacteria 4011
17 Ga0157375_10015634 3300013308 Bacteria 6799
18 Ga0207426_1005852 3300025302 Bacteria 5490
19 Ga0207655_1021837 3300025728 Bacteria 3231
20 Ga0207647_10012946 3300025904 Bacteria 5796
21 Ga0207684_10011611 3300025910 Bacteria 7696
22 Ga0207657_10095297 3300025919 Bacteria 2477
23 Ga0207646_10023551 3300025922 Bacteria 5654
24 Ga0207678_10000093 3300026067 Bacteria 74658
25 Ga0207641_10022003 3300026088 Bacteria 5243
26 Ga0265337_1002295 3300028556 Bacteria 8882
27 Ga0307515_10000478 3300028794 Bacteria 95304
28 Ga0307515_10001818 3300028794 Bacteria 47593
29 Ga0307515_10023694 3300028794 Bacteria 10740
30 Ga0307515_10068136 3300028794 Bacteria 4895
31 Ga0307515_10123867 3300028794 Bacteria 2904
32 Ga0265338_10002176 3300028800 Bacteria 30097
33 Ga0265338_10003535 3300028800 Bacteria 21868
34 Ga0307512_10003036 3300030522 Bacteria 20144
35 Ga0307512_10013486 3300030522 Bacteria 7654
36 Ga0265327_10015838 3300031251 Bacteria 4835
37 Ga0307509_10062616 3300031507 Bacteria 3922
38 Ga0307514_10004738 3300031649 Bacteria 12427
39 Ga0316575_10000006 3300031665 Bacteria 85686
40 Ga0316576_10002430 3300031727 Bacteria 10587
41 Ga0316576_10012919 3300031727 Bacteria 5527
42 Ga0307516_10005036 3300031730 Bacteria 15987
43 Ga0307516_10007529 3300031730 Bacteria 12505
44 Ga0307516_10065172 3300031730 Bacteria 3519
45 Ga0307518_10002459 3300031838 Bacteria 13514
46 Ga0307507_10006565 3300033179 Bacteria 17737
47 Ga0307510_10023014 3300033180 Bacteria 7227
48 Ga0373948_0002167 3300034817 Bacteria 2860
49 Ga0316574_0004421 3300035398 Bacteria 7363
50 Ga0373931_0000070 3300035691 Bacteria 49819
51 Ga0316582_0026658 3300036647 Bacteria 3481
52 Ga0395900_0194706 3300037418 Bacteria 2054
53 Ga0395898_0018848 3300037466 Bacteria 7032
54 Ga0395905_0126336 3300037471 Bacteria 2405
55 Ga0451853_3647263 3300041512 Bacteria 8363
56 Ga0466969_0022730 3300044656 Bacteria 3235
57 Ga0466972_0005849 3300044658 Bacteria 6168
58 Ga0466972_0046917 3300044658 Bacteria 2090
59 Ga0466965_0000180 3300044683 Bacteria 19342
60 Ga0466966_0000819 3300044684 Bacteria 19793
61 Ga0466966_0004436 3300044684 Bacteria 9251
62 Ga0466961_0008371 3300044693 Bacteria 6587
63 Ga0466963_0000241 3300044694 Bacteria 23788
64 Ga0466964_0003955 3300044706 Bacteria 5448
65 Ga0466971_0000324 3300044719 Bacteria 18366
66 Ga0466968_0028700 3300044735 Bacteria 2296
67 Ga0466970_0006710 3300044765 Bacteria 5759
68 Ga0466957_0007346 3300044842 Bacteria 6228
69 Ga0466959_0010092 3300045049 Bacteria 6734
70 Ga0466958_0000381 3300045836 Bacteria 18033
71 Ga0495603_0001544 3300046455 Bacteria 13473
72 Ga0495603_0012398 3300046455 Bacteria 5161
73 Ga0495629_0013192 3300046459 Bacteria 5966
74 Ga0495629_0015586 3300046459 Bacteria 5457
75 Ga0495585_0040352 3300046492 Bacteria 2621
76 Ga0495594_0001721 3300046499 Bacteria 11342
77 Ga0495606_0000527 3300046507 Bacteria 61814
78 Ga0495630_0020906 3300046517 Bacteria 4831
79 Ga0495668_0000415 3300046616 Bacteria 55706
80 Ga0495625_0000363 3300046660 Bacteria 69433
81 Ga0495635_0038237 3300046663 Bacteria 3323
82 Ga0495676_0010333 3300047321 Bacteria 8467
83 Ga0495680_0097862 3300047322 Bacteria 2190
84 Ga0495685_012546 3300047447 Bacteria 2870
85 Ga0495614_0000408 3300048089 Bacteria 17541
86 Ga0495626_0000052 3300048091 Bacteria 156421
87 Ga0496101_0013268 3300048904 Bacteria 5518
88 Ga0496102_0046432 3300048905 Bacteria 3945
89 Ga0496104_0008580 3300048907 Bacteria 9089
90 Ga0496104_0075481 3300048907 Bacteria 3210
91 Ga0496104_0144154 3300048907 Bacteria 2288
92 Ga0496105_0029926 3300048908 Bacteria 4459
93 Ga0496105_0036667 3300048908 Bacteria 4040
94 Ga0496105_0167167 3300048908 Bacteria 1804
95 Ga0496108_0027789 3300048911 Bacteria 4676
96 Ga0496110_0014705 3300048913 Bacteria 6505
97 Ga0496114_0002415 3300048917 Bacteria 14245
98 Ga0496114_0062616 3300048917 Bacteria 3113
99 Ga0496114_0094606 3300048917 Bacteria 2542
100 Ga0501033_0002100 3300049570 Bacteria 17263
101 Ga0501033_0017390 3300049570 Bacteria 5431
102 Ga0501034_0002762 3300049571 Bacteria 20615
103 Ga0501034_0013171 3300049571 Bacteria 8521
104 Ga0501034_0026510 3300049571 Bacteria 5902
105 Ga0501034_0036454 3300049571 Bacteria 4982
106 Ga0501036_0007896 3300049572 Bacteria 8706
107 Ga0501037_0036749 3300049573 Bacteria 3609
108 Ga0501037_0070763 3300049573 Bacteria 2538
109 Ga0501038_0000884 3300049574 Bacteria 26551
110 Ga0501038_0020340 3300049574 Bacteria 5968
111 Ga0501038_0024845 3300049574 Bacteria 5341
112 Ga0501039_0001186 3300049575 Bacteria 19115
113 Ga0501043_0004888 3300049579 Bacteria 10823
114 Ga0501047_0028322 3300049581 Bacteria 5400
115 Ga0501047_0030172 3300049581 Bacteria 5228
116 Ga0501047_0044794 3300049581 Bacteria 4276
117 Ga0501047_0081589 3300049581 Bacteria 3108
118 Ga0501070_0001364 3300049586 Bacteria 21872
119 Ga0501070_0001533 3300049586 Bacteria 20556
120 Ga0501070_0016808 3300049586 Bacteria 6141
121 Ga0501074_0005038 3300049590 Bacteria 9478
122 Ga0501080_0030170 3300049742 Bacteria 5051
123 Ga0501080_0030675 3300049742 Bacteria 5009
124 Ga0501035_0001732 3300049822 Bacteria 22043
125 Ga0501035_0172790 3300049822 Bacteria 1866
126 Ga0501044_0004942 3300049823 Bacteria 14911
127 Ga0501044_0023065 3300049823 Bacteria 6625
128 Ga0501044_0044717 3300049823 Bacteria 4593
129 nmdc:mga06r32_5114_c1 3300050510 Bacteria 11799
130 Ga0500644_0011773 3300053088 Bacteria 2401
131 Ga0500646_0000918 3300053090 Bacteria 8129
132 Ga0500583_0019160 3300053092 Bacteria 2800
133 Ga0500641_0010702 3300053096 Bacteria 3321
134 Ga0500616_0001115 3300053153 Bacteria 27728
135 Ga0501082_0002311 3300060353 Bacteria 16669
136 Ga0466962_0009406 3300061719 Bacteria 4684
137 2515851879 2515154155 Bacteria 7985436
138 2554258702 2554235005 Bacteria 6457341
139 2585301575 2582581312 Bacteria 7308206
140 2586060686 2585427649 Bacteria 9053857
141 2616899782 2616644941 Bacteria 8510691
142 2643849460 2643221566 Bacteria 3460379
143 2643888615 2643221575 Bacteria 4022601
144 2643897733 2643221578 Bacteria 9213798
145 2643996314 2643221597 Bacteria 3347721
146 2644408879 2643221673 Bacteria 9196637
147 2644436210 2643221678 Bacteria 9540101
148 2644625917 2643221714 Bacteria 9015452
149 2676476473 2675903058 Bacteria 6822861
150 2676491363 2675903060 Bacteria 10051191
151 2739362744 2738543034 Bacteria 6084756
152 2753262855 2751185782 Bacteria 11227053
153 2774400120 2773857763 Bacteria 4180068
154 2785368414 2784746768 Bacteria 10036182
155 2793979394 2791355406 Bacteria 11364898
156 2804844739 2802429296 Bacteria 7227771
157 2808841102 2808606359 Bacteria 9866990
158 2809589230 2808606522 Bacteria 9488490
159 2811848147 2808606982 Bacteria 7791042
160 2812322535 2811994872 Bacteria 4121241
161 2827632282 2827628540 Bacteria 6858585
162 2861524526 2861520306 Bacteria 8348283
163 2862182633 2862178590 Bacteria 8583590
164 2862288306 2862281513 Bacteria 9621493
165 2862582529 2862574272 Bacteria 10567477
166 2867477210 2867475112 Bacteria 6909112
167 2873156697 2873151551 Bacteria 8625867
168 2875393644 2875391855 Bacteria 7600475
169 2887485104 2887478801 Bacteria 8972725
170 2895434543 2895427314 Bacteria 13147766
171 2912721086 2912715099 Bacteria 9460473
172 2912759821 2912757875 Bacteria 7940295
173 2915769599 2915768154 Bacteria 8424322
174 2918503682 2918501144 Bacteria 8668083
175 2919468508 2919468124 Bacteria 9133025
176 2945943156 2945941187 Bacteria 4682474
177 2946050998 2946045630 Bacteria 8527308
178 2954003864 2954002825 Bacteria 9173742
179 2954717177 2954711539 Bacteria 10867210
180 2954727144 2954721474 Bacteria 10456478
181 2954734656 2954731030 Bacteria 10243860
182 2954746049 2954740390 Bacteria 10229294
183 2954753543 2954749733 Bacteria 10366972
184 2954765019 2954759201 Bacteria 9358192
185 2966603398 2966598605 Bacteria 7676064
186 3003003737 3002998708 Bacteria 11715108
187 3006427407 3006425503 Bacteria 6491253
188 3006490285 3006486233 Bacteria 8157040
189 8002776127 8002775197 Bacteria 10728764
190 8003315545 8003314358 Bacteria 10575343
191 8003320793 8003314358 Bacteria 10575343
192 8025418371 8025413630 Bacteria 7014048
193 8025531217 8025530807 Bacteria 8495698
194 8045832610 8045830549 Bacteria 4444727
195 8047897195 8047893842 Bacteria 11723082
196 8048133534 8048127548 Bacteria 11053136
197 8048361757 8048356638 Bacteria 11044339
198 8048374178 8048369669 Bacteria 11666822
199 8048384048 8048379754 Bacteria 11877923
200 8057570708 8057568493 Bacteria 7221719
201 Ga0070660_100082151
202 Ga0070663_100000117
203 Ga0070681_10104232
204 Ga0070706_100007510
205 Ga0070707_100018983
206 Ga0068859_100001804
207 Ga0068863_100000441
208 Ga0070717_10114159
209 Ga0075428_100002531
210 Ga0075430_100038028
211 Ga0075431_100044176
212 Ga0075429_100003881
213 Ga0097620_100001804
214 Ga0114129_10000517
215 Ga0105243_10017737
216 Ga0105243_10032852
217 Ga0157375_10015634
218 Ga0207426_1005852
219 Ga0207655_1021837
220 Ga0207647_10012946
221 Ga0207684_10011611
222 Ga0207657_10095297
223 Ga0207646_10023551
224 Ga0207678_10000093
225 Ga0207641_10022003
226 Ga0265337_1002295
227 Ga0307515_10000478
228 Ga0307515_10001818
229 Ga0307515_10023694
230 Ga0307515_10068136
231 Ga0307515_10123867
232 Ga0265338_10002176
233 Ga0265338_10003535
234 Ga0307512_10003036
235 Ga0307512_10013486
236 Ga0265327_10015838
237 Ga0307509_10062616
238 Ga0307514_10004738
239 Ga0316575_10000006
240 Ga0316576_10002430
241 Ga0316576_10012919
242 Ga0307516_10005036
243 Ga0307516_10007529
244 Ga0307516_10065172
245 Ga0307518_10002459
246 Ga0307507_10006565
247 Ga0307510_10023014
248 Ga0373948_0002167
249 Ga0316574_0004421
250 Ga0373931_0000070
251 Ga0316582_0026658
252 Ga0395900_0194706
253 Ga0395898_0018848
254 Ga0395905_0126336
255 Ga0451853_3647263
256 Ga0466969_0022730
257 Ga0466972_0005849
258 Ga0466972_0046917
259 Ga0466965_0000180
260 Ga0466966_0000819
261 Ga0466966_0004436
262 Ga0466961_0008371
263 Ga0466963_0000241
264 Ga0466964_0003955
265 Ga0466971_0000324
266 Ga0466968_0028700
267 Ga0466970_0006710
268 Ga0466957_0007346
269 Ga0466959_0010092
270 Ga0466958_0000381
271 Ga0495603_0001544
272 Ga0495603_0012398
273 Ga0495629_0013192
274 Ga0495629_0015586
275 Ga0495585_0040352
276 Ga0495594_0001721
277 Ga0495606_0000527
278 Ga0495630_0020906
279 Ga0495668_0000415
280 Ga0495625_0000363
281 Ga0495635_0038237
282 Ga0495676_0010333
283 Ga0495680_0097862
284 Ga0495685_012546
285 Ga0495614_0000408
286 Ga0495626_0000052
287 Ga0496101_0013268
288 Ga0496102_0046432
289 Ga0496104_0008580
290 Ga0496104_0075481
291 Ga0496104_0144154
292 Ga0496105_0029926
293 Ga0496105_0036667
294 Ga0496105_0167167
295 Ga0496108_0027789
296 Ga0496110_0014705
297 Ga0496114_0002415
298 Ga0496114_0062616
299 Ga0496114_0094606
300 Ga0501033_0002100
301 Ga0501033_0017390
302 Ga0501034_0002762
303 Ga0501034_0013171
304 Ga0501034_0026510
305 Ga0501034_0036454
306 Ga0501036_0007896
307 Ga0501037_0036749
308 Ga0501037_0070763
309 Ga0501038_0000884
310 Ga0501038_0020340
311 Ga0501038_0024845
312 Ga0501039_0001186
313 Ga0501043_0004888
314 Ga0501047_0028322
315 Ga0501047_0030172
316 Ga0501047_0044794
317 Ga0501047_0081589
318 Ga0501070_0001364
319 Ga0501070_0001533
320 Ga0501070_0016808
321 Ga0501074_0005038
322 Ga0501080_0030170
323 Ga0501080_0030675
324 Ga0501035_0001732
325 Ga0501035_0172790
326 Ga0501044_0004942
327 Ga0501044_0023065
328 Ga0501044_0044717
329 nmdc:mga06r32_5114_c1
330 Ga0500644_0011773
331 Ga0500646_0000918
332 Ga0500583_0019160
333 Ga0500641_0010702
334 Ga0500616_0001115
335 Ga0501082_0002311
336 Ga0466962_0009406
337 2515851879
338 2554258702
339 2585301575
340 2586060686
341 2616899782
342 2643849460
343 2643888615
344 2643897733
345 2643996314
346 2644408879
347 2644436210
348 2644625917
349 2676476473
350 2676491363
351 2739362744
352 2753262855
353 2774400120
354 2785368414
355 2793979394
356 2804844739
357 2808841102
358 2809589230
359 2811848147
360 2812322535
361 2827632282
362 2861524526
363 2862182633
364 2862288306
365 2862582529
366 2867477210
367 2873156697
368 2875393644
369 2887485104
370 2895434543
371 2912721086
372 2912759821
373 2915769599
374 2918503682
375 2919468508
376 2945943156
377 2946050998
378 2954003864
379 2954717177
380 2954727144
381 2954734656
382 2954746049
383 2954753543
384 2954765019
385 2966603398
386 3003003737
387 3006427407
388 3006490285
389 8002776127
390 8003315545
391 8003320793
392 8025418371
393 8025531217
394 8045832610
395 8047897195
396 8048133534
397 8048361757
398 8048374178
399 8048384048
400 8057570708

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

52

323

0.99

PF00005

ABC_tran

ABC transporter

386

535

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vx4-assembly1.cif.gz_A crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway 0.9607 328 566
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9588 334 568
3vx4-assembly1.cif.gz_A crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway 0.949 328 566
2fgj-assembly3.cif.gz_C crystal structure of the abc-cassette h662a mutant of hlyb with bound atp 0.9404 334 568
2ixf-assembly2.cif.gz_D crystal structure of the atpase domain of tap1 with atp (d645q, q678h mutant) 0.9398 323 568
ID Description Score Start End Superfamily
af_P9WQJ1_326_578_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9728 328 574 3.40.50.300
6qv0C02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9681 318 570 3.40.50.300
af_Q4CVK2_1_214_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9644 368 574 3.40.50.300
af_P9WQJ7_327_576_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9614 331 575 3.40.50.300
6qv0C02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9607 318 570 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A0L8QTM6-F1-model_v4 deleted 0.9557 301 472
AF-A0A3P6TE24-F1-model_v4 ABC transporter domain-containing protein 0.9535 353 525 GO:0005524
GO:0016020
GO:0016887
GO:0042626
AF-A0A539DVK0-F1-model_v4 Putative ABC transporter permease/ATP-binding protein 0.9482 416 577 GO:0005524
GO:0016887
GO:0034040
AF-A0A388Q3V0-F1-model_v4 Lipid A export ATP-binding/permease protein MsbA 0.9454 311 485 GO:0005524
GO:0016887
GO:0034040
AF-T0VG12-F1-model_v4 deleted 0.9452 336 576

Map