F307289

General Info

Members Datasets Scaffolds Average Seq Length
200 138 400 512

Family's Representative Sequence

Representative Sequence 3300025972|Ga0207668_10017207|Ga0207668_100172073
Length 566
Sequence MKLYRAFATVGGLTMLSRILGFIRDILLARVFGTGFVADAFVVAFRFPNARRLEGEGPSAARQFAEEAMAGLVFVLVLLSALCMLAMPWLMYVLAPGFAATPEKYDLAVVMSQIAFPYLLCMSLAALLSGVLNSLGKFVESSSVSIVLNLTLMAAMLLAMALGYGNDRNAGLVLAWGIFAAGILQLVVLIDGVRRNGMLLRLRRPRFTEGMRRLVALGIPGVVAGGVTQINIVIGGMIASFQQGAVSYLYYADRLYELPLAIIGIAIGVVLLPDVSRHLRAGDDVAVMDSQNRSFEFAMLLTVPAAVALAVVPHQIVSVLFERGAFHAADTRNVANALAIFALGLPSFVMIKVFSPAYFAREDTRTPMRYAVISLTSNTVGSVVLFWLFRWLGYMPHLGIAVATTLGGWLNAMLLYRTLIARGHFVADARLGRVLPMILLASGIMGIALWMAADWLDPWLMPTQGVLTRATSLATIVGIGLLVLCLGMVLKYGYDKPGLSEFWDQKHGLLYMIYVFATANLGFKMRWSLGRMVAVMLAGVVPFLSFWAERKVAREVEQQLAGSLAG

Samples

Sample ID Description Type Environment
1 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
42 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
45 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
46 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
47 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
48 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
51 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
54 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
57 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
58 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
59 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
64 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
73 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
74 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
75 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
76 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
77 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
78 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
81 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
98 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
99 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
100 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
101 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
102 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
109 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
110 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
111 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
112 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
113 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
114 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
115 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
118 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
119 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
120 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
121 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
122 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
123 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
124 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
127 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
128 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
129 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
130 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
131 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
132 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
133 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
134 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
135 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
136 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
137 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
138 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94
Metatranscriptomes 0
Isolates 6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6
Nodule 0.5
Rhizoplane 11.5
Rhizosphere 78
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207668_10017207 3300025972 Bacteria 4525
2 Ga0070680_100001076 3300005336 Bacteria 19617
3 Ga0070692_10024068 3300005345 Bacteria 2989
4 Ga0070668_100160890 3300005347 Bacteria 1822
5 Ga0070674_100075295 3300005356 Bacteria 2397
6 Ga0070703_10001777 3300005406 Bacteria 6387
7 Ga0070701_10002438 3300005438 Bacteria 7173
8 Ga0070705_100000102 3300005440 Bacteria 48400
9 Ga0070694_100002536 3300005444 Bacteria 10781
10 Ga0070678_100119744 3300005456 Bacteria 2074
11 Ga0070681_10008773 3300005458 Bacteria 9923
12 Ga0070699_100011489 3300005518 Bacteria 7645
13 Ga0070697_100016258 3300005536 Bacteria 5849
14 Ga0070696_100003366 3300005546 Bacteria 10665
15 Ga0068864_100034757 3300005618 Bacteria 4289
16 Ga0068861_100024740 3300005719 Bacteria 4346
17 Ga0068860_100060363 3300005843 Bacteria 3604
18 Ga0068862_100009004 3300005844 Bacteria 8262
19 Ga0081540_1000091 3300005983 Bacteria 94664
20 Ga0075368_10000819 3300006042 Bacteria 9568
21 Ga0075368_10006776 3300006042 Bacteria 4025
22 Ga0075364_10006838 3300006051 Bacteria 6730
23 Ga0075367_10003606 3300006178 Bacteria 7416
24 Ga0075428_100001353 3300006844 Bacteria 26002
25 Ga0075430_100052349 3300006846 Bacteria 3439
26 Ga0075431_100001262 3300006847 Bacteria 23036
27 Ga0075431_100057809 3300006847 Bacteria 4000
28 Ga0075431_100167587 3300006847 Bacteria 2258
29 Ga0075433_10000150 3300006852 Bacteria 37277
30 Ga0075434_100096250 3300006871 Bacteria 2965
31 Ga0075435_100022930 3300007076 Bacteria 4819
32 Ga0075435_100025149 3300007076 Bacteria 4632
33 Ga0111539_10009027 3300009094 Bacteria 12617
34 Ga0111539_10037872 3300009094 Bacteria 5818
35 Ga0114129_10051769 3300009147 Bacteria 5763
36 Ga0114129_10095243 3300009147 Bacteria 4123
37 Ga0114129_10133739 3300009147 Bacteria 3405
38 Ga0114129_10239408 3300009147 Bacteria 2440
39 Ga0105243_10050012 3300009148 Bacteria 3300
40 Ga0105249_10003962 3300009553 Bacteria 12774
41 Ga0163162_10029865 3300013306 Bacteria 5397
42 Ga0163161_10004456 3300017792 Bacteria 9754
43 Ga0207660_10000874 3300025917 Bacteria 19913
44 Ga0207662_10022810 3300025918 Bacteria 3592
45 Ga0207678_10003616 3300026067 Bacteria 13888
46 Ga0207676_10001734 3300026095 Bacteria 16040
47 Ga0207675_100038677 3300026118 Bacteria 4451
48 Ga0207675_100064647 3300026118 Bacteria 3420
49 Ga0207675_100177586 3300026118 Bacteria 2038
50 Ga0207683_10137923 3300026121 Bacteria 2196
51 Ga0207428_10005033 3300027907 Bacteria 12420
52 Ga0207428_10007231 3300027907 Bacteria 10149
53 Ga0268265_10002219 3300028380 Bacteria 14946
54 Ga0268264_10003869 3300028381 Bacteria 12847
55 Ga0265318_10003413 3300028577 Bacteria 7983
56 Ga0265325_10040728 3300031241 Bacteria 2438
57 Ga0265325_10052750 3300031241 Bacteria 2087
58 Ga0265340_10001851 3300031247 Bacteria 12075
59 Ga0265340_10017107 3300031247 Bacteria 3750
60 Ga0265339_10004942 3300031249 Bacteria 8980
61 Ga0265331_10050027 3300031250 Bacteria 2005
62 Ga0265316_10016721 3300031344 Bacteria 6355
63 Ga0265316_10072170 3300031344 Bacteria 2660
64 Ga0307513_10025521 3300031456 Bacteria 6842
65 Ga0265313_10001338 3300031595 Bacteria 23213
66 Ga0265313_10005817 3300031595 Bacteria 8953
67 Ga0265313_10051906 3300031595 Bacteria 1959
68 Ga0265314_10025841 3300031711 Bacteria 4422
69 Ga0265342_10001917 3300031712 Bacteria 18681
70 Ga0316578_10033278 3300031728 Bacteria 2952
71 Ga0307415_100133232 3300032126 Bacteria 1885
72 Ga0373940_0004023 3300035088 Bacteria 3071
73 Ga0373949_0004053 3300035090 Bacteria 3395
74 Ga0373952_0004694 3300035092 Bacteria 2484
75 Ga0373952_0005049 3300035092 Bacteria 2404
76 Ga0373941_0002491 3300035115 Bacteria 4063
77 Ga0316574_0030388 3300035398 Bacteria 3271
78 Ga0373931_0000951 3300035691 Bacteria 12183
79 Ga0373931_0004017 3300035691 Bacteria 6664
80 Ga0373927_0045164 3300035695 Bacteria 2850
81 Ga0316582_0086409 3300036647 Bacteria 2057
82 Ga0316584_0008110 3300036712 Bacteria 7216
83 Ga0451577_0088251 3300042876 Bacteria 2767
84 Ga0451576_0001090 3300045051 Bacteria 49620
85 Ga0496101_0001873 3300048904 Bacteria 12709
86 Ga0496102_0004519 3300048905 Bacteria 11754
87 Ga0496104_0000094 3300048907 Bacteria 86872
88 Ga0496104_0009060 3300048907 Bacteria 8849
89 Ga0496104_0109411 3300048907 Bacteria 2648
90 Ga0496105_0007066 3300048908 Bacteria 8654
91 Ga0496105_0017217 3300048908 Bacteria 5790
92 Ga0496105_0158127 3300048908 Bacteria 1861
93 Ga0496106_0002285 3300048909 Bacteria 14295
94 Ga0496106_0013291 3300048909 Bacteria 6077
95 Ga0496107_0006096 3300048910 Bacteria 8282
96 Ga0496108_0020202 3300048911 Bacteria 5474
97 Ga0496108_0024350 3300048911 Bacteria 4983
98 Ga0496109_0006950 3300048912 Bacteria 9551
99 Ga0496109_0128154 3300048912 Bacteria 2367
100 Ga0496110_0000954 3300048913 Bacteria 20257
101 Ga0496110_0035125 3300048913 Bacteria 4347
102 Ga0496110_0051867 3300048913 Bacteria 3605
103 Ga0496112_0084025 3300048915 Bacteria 3149
104 Ga0496113_0000109 3300048916 Bacteria 35336
105 Ga0496114_0003066 3300048917 Bacteria 12805
106 Ga0496115_0003665 3300048918 Bacteria 11054
107 Ga0496115_0014683 3300048918 Bacteria 5932
108 Ga0496124_0119131 3300048927 Bacteria 2112
109 Ga0501031_0042514 3300049568 Bacteria 2966
110 Ga0501031_0045615 3300049568 Bacteria 2860
111 Ga0501033_0096533 3300049570 Bacteria 2160
112 Ga0501034_0027884 3300049571 Bacteria 5743
113 Ga0501034_0030938 3300049571 Bacteria 5439
114 Ga0501034_0193206 3300049571 Bacteria 1997
115 Ga0501034_0242921 3300049571 Bacteria 1746
116 Ga0501036_0016258 3300049572 Bacteria 6215
117 Ga0501036_0066298 3300049572 Bacteria 3055
118 Ga0501036_0106576 3300049572 Bacteria 2370
119 Ga0501037_0003451 3300049573 Bacteria 11485
120 Ga0501038_0054615 3300049574 Bacteria 3435
121 Ga0501039_0078815 3300049575 Bacteria 2563
122 Ga0501040_0005780 3300049576 Bacteria 8008
123 Ga0501043_0061301 3300049579 Bacteria 2954
124 Ga0501046_0065838 3300049580 Bacteria 2826
125 Ga0501047_0026634 3300049581 Bacteria 5564
126 Ga0501047_0029441 3300049581 Bacteria 5294
127 Ga0501047_0045649 3300049581 Bacteria 4236
128 Ga0501048_0091035 3300049582 Bacteria 2152
129 Ga0501067_0006796 3300049583 Bacteria 6343
130 Ga0501067_0027798 3300049583 Bacteria 3134
131 Ga0501068_0077344 3300049584 Bacteria 2038
132 Ga0501070_0031204 3300049586 Bacteria 4464
133 Ga0501072_0117250 3300049588 Bacteria 2121
134 Ga0501072_0133423 3300049588 Bacteria 1980
135 Ga0501073_0017118 3300049589 Bacteria 5250
136 Ga0501073_0028742 3300049589 Bacteria 3973
137 Ga0501073_0081345 3300049589 Bacteria 2253
138 Ga0501074_0066460 3300049590 Bacteria 2594
139 Ga0501075_0019517 3300049591 Bacteria 4919
140 Ga0501075_0023730 3300049591 Bacteria 4492
141 Ga0501076_0024536 3300049592 Bacteria 4661
142 Ga0501077_0001460 3300049593 Bacteria 14230
143 Ga0501077_0010225 3300049593 Bacteria 5843
144 Ga0501077_0013190 3300049593 Bacteria 5179
145 Ga0501077_0042072 3300049593 Bacteria 2907
146 Ga0501079_0040621 3300049741 Bacteria 3589
147 Ga0501079_0080374 3300049741 Bacteria 2521
148 Ga0501080_0005215 3300049742 Bacteria 11578
149 Ga0501080_0035306 3300049742 Bacteria 4666
150 Ga0501080_0080137 3300049742 Bacteria 3035
151 Ga0501081_0046042 3300049743 Bacteria 2997
152 Ga0501081_0066027 3300049743 Bacteria 2516
153 Ga0501081_0127477 3300049743 Bacteria 1816
154 Ga0501083_0002387 3300049744 Bacteria 12863
155 Ga0501083_0039014 3300049744 Bacteria 3226
156 Ga0501083_0045112 3300049744 Bacteria 2982
157 Ga0501044_0232360 3300049823 Bacteria 1791
158 Ga0501045_0001222 3300049824 Bacteria 17107
159 Ga0501045_0078166 3300049824 Bacteria 2439
160 Ga0501045_0117409 3300049824 Bacteria 1975
161 nmdc:mga03n38_6126_c1 3300050490 Bacteria 4155
162 nmdc:mga00v17_22703_c1 3300050491 Bacteria 3623
163 nmdc:mga0yw44_10378_c1 3300050492 Bacteria 4755
164 nmdc:mga06z11_11015_c1 3300050494 Bacteria 3880
165 nmdc:mga06z11_1880_c1 3300050494 Bacteria 7913
166 nmdc:mga04h51_3625_c1 3300050495 Bacteria 3772
167 nmdc:mga05p37_11538_c2 3300050507 Bacteria 9914
168 nmdc:mga05p37_197281_c1 3300050507 Bacteria 2440
169 nmdc:mga0qj67_34419_c1 3300050509 Bacteria 3957
170 nmdc:mga06r32_110463_c1 3300050510 Bacteria 2705
171 nmdc:mga06r32_2964_c2 3300050510 Bacteria 11231
172 nmdc:mga06r32_73985_c1 3300050510 Bacteria 3302
173 nmdc:mga08y16_4669_c1 3300050511 Bacteria 14271
174 nmdc:mga0n895_13868_c1 3300050512 Bacteria 7296
175 nmdc:mga0rr50_37992_c1 3300050513 Bacteria 3480
176 nmdc:mga0a205_2229_c1 3300050515 Bacteria 17057
177 nmdc:mga0a205_34097_c1 3300050515 Bacteria 4883
178 Ga0495601_0041857 3300053077 Bacteria 2872
179 Ga0495612_0050679 3300053078 Bacteria 1705
180 Ga0500556_0000054 3300053104 Bacteria 115949
181 Ga0500616_0002525 3300053153 Bacteria 15140
182 Ga0501084_0002747 3300054114 Bacteria 14203
183 Ga0501084_0020271 3300054114 Bacteria 5543
184 Ga0501084_0055860 3300054114 Bacteria 3304
185 Ga0501084_0178906 3300054114 Bacteria 1790
186 Ga0501082_0025707 3300060353 Bacteria 5074
187 Ga0501082_0047470 3300060353 Bacteria 3700
188 Ga0530510_0000910 3300061734 Bacteria 19521
189 2514586335 2513237351 Bacteria 6968952
190 2523466838 2523231067 Bacteria 5230452
191 2739348719 2738543031 Bacteria 5769731
192 2837681131 2837678835 Bacteria 5252418
193 2889792731 2889790730 Bacteria 5689708
194 2889916237 2889914905 Bacteria 5702301
195 2894821208 2894817345 Bacteria 4892941
196 2917556187 2917554339 Bacteria 4987857
197 2937843447 2937843397 Bacteria 5256375
198 2939673330 2939669807 Bacteria 5028511
199 8045868740 8045864390 Bacteria 5043873
200 8054566004 8054563764 Bacteria 5592885
201 Ga0207668_10017207
202 Ga0070680_100001076
203 Ga0070692_10024068
204 Ga0070668_100160890
205 Ga0070674_100075295
206 Ga0070703_10001777
207 Ga0070701_10002438
208 Ga0070705_100000102
209 Ga0070694_100002536
210 Ga0070678_100119744
211 Ga0070681_10008773
212 Ga0070699_100011489
213 Ga0070697_100016258
214 Ga0070696_100003366
215 Ga0068864_100034757
216 Ga0068861_100024740
217 Ga0068860_100060363
218 Ga0068862_100009004
219 Ga0081540_1000091
220 Ga0075368_10000819
221 Ga0075368_10006776
222 Ga0075364_10006838
223 Ga0075367_10003606
224 Ga0075428_100001353
225 Ga0075430_100052349
226 Ga0075431_100001262
227 Ga0075431_100057809
228 Ga0075431_100167587
229 Ga0075433_10000150
230 Ga0075434_100096250
231 Ga0075435_100022930
232 Ga0075435_100025149
233 Ga0111539_10009027
234 Ga0111539_10037872
235 Ga0114129_10051769
236 Ga0114129_10095243
237 Ga0114129_10133739
238 Ga0114129_10239408
239 Ga0105243_10050012
240 Ga0105249_10003962
241 Ga0163162_10029865
242 Ga0163161_10004456
243 Ga0207660_10000874
244 Ga0207662_10022810
245 Ga0207678_10003616
246 Ga0207676_10001734
247 Ga0207675_100038677
248 Ga0207675_100064647
249 Ga0207675_100177586
250 Ga0207683_10137923
251 Ga0207428_10005033
252 Ga0207428_10007231
253 Ga0268265_10002219
254 Ga0268264_10003869
255 Ga0265318_10003413
256 Ga0265325_10040728
257 Ga0265325_10052750
258 Ga0265340_10001851
259 Ga0265340_10017107
260 Ga0265339_10004942
261 Ga0265331_10050027
262 Ga0265316_10016721
263 Ga0265316_10072170
264 Ga0307513_10025521
265 Ga0265313_10001338
266 Ga0265313_10005817
267 Ga0265313_10051906
268 Ga0265314_10025841
269 Ga0265342_10001917
270 Ga0316578_10033278
271 Ga0307415_100133232
272 Ga0373940_0004023
273 Ga0373949_0004053
274 Ga0373952_0004694
275 Ga0373952_0005049
276 Ga0373941_0002491
277 Ga0316574_0030388
278 Ga0373931_0000951
279 Ga0373931_0004017
280 Ga0373927_0045164
281 Ga0316582_0086409
282 Ga0316584_0008110
283 Ga0451577_0088251
284 Ga0451576_0001090
285 Ga0496101_0001873
286 Ga0496102_0004519
287 Ga0496104_0000094
288 Ga0496104_0009060
289 Ga0496104_0109411
290 Ga0496105_0007066
291 Ga0496105_0017217
292 Ga0496105_0158127
293 Ga0496106_0002285
294 Ga0496106_0013291
295 Ga0496107_0006096
296 Ga0496108_0020202
297 Ga0496108_0024350
298 Ga0496109_0006950
299 Ga0496109_0128154
300 Ga0496110_0000954
301 Ga0496110_0035125
302 Ga0496110_0051867
303 Ga0496112_0084025
304 Ga0496113_0000109
305 Ga0496114_0003066
306 Ga0496115_0003665
307 Ga0496115_0014683
308 Ga0496124_0119131
309 Ga0501031_0042514
310 Ga0501031_0045615
311 Ga0501033_0096533
312 Ga0501034_0027884
313 Ga0501034_0030938
314 Ga0501034_0193206
315 Ga0501034_0242921
316 Ga0501036_0016258
317 Ga0501036_0066298
318 Ga0501036_0106576
319 Ga0501037_0003451
320 Ga0501038_0054615
321 Ga0501039_0078815
322 Ga0501040_0005780
323 Ga0501043_0061301
324 Ga0501046_0065838
325 Ga0501047_0026634
326 Ga0501047_0029441
327 Ga0501047_0045649
328 Ga0501048_0091035
329 Ga0501067_0006796
330 Ga0501067_0027798
331 Ga0501068_0077344
332 Ga0501070_0031204
333 Ga0501072_0117250
334 Ga0501072_0133423
335 Ga0501073_0017118
336 Ga0501073_0028742
337 Ga0501073_0081345
338 Ga0501074_0066460
339 Ga0501075_0019517
340 Ga0501075_0023730
341 Ga0501076_0024536
342 Ga0501077_0001460
343 Ga0501077_0010225
344 Ga0501077_0013190
345 Ga0501077_0042072
346 Ga0501079_0040621
347 Ga0501079_0080374
348 Ga0501080_0005215
349 Ga0501080_0035306
350 Ga0501080_0080137
351 Ga0501081_0046042
352 Ga0501081_0066027
353 Ga0501081_0127477
354 Ga0501083_0002387
355 Ga0501083_0039014
356 Ga0501083_0045112
357 Ga0501044_0232360
358 Ga0501045_0001222
359 Ga0501045_0078166
360 Ga0501045_0117409
361 nmdc:mga03n38_6126_c1
362 nmdc:mga00v17_22703_c1
363 nmdc:mga0yw44_10378_c1
364 nmdc:mga06z11_11015_c1
365 nmdc:mga06z11_1880_c1
366 nmdc:mga04h51_3625_c1
367 nmdc:mga05p37_11538_c2
368 nmdc:mga05p37_197281_c1
369 nmdc:mga0qj67_34419_c1
370 nmdc:mga06r32_110463_c1
371 nmdc:mga06r32_2964_c2
372 nmdc:mga06r32_73985_c1
373 nmdc:mga08y16_4669_c1
374 nmdc:mga0n895_13868_c1
375 nmdc:mga0rr50_37992_c1
376 nmdc:mga0a205_2229_c1
377 nmdc:mga0a205_34097_c1
378 Ga0495601_0041857
379 Ga0495612_0050679
380 Ga0500556_0000054
381 Ga0500616_0002525
382 Ga0501084_0002747
383 Ga0501084_0020271
384 Ga0501084_0055860
385 Ga0501084_0178906
386 Ga0501082_0025707
387 Ga0501082_0047470
388 Ga0530510_0000910
389 2514586335
390 2523466838
391 2739348719
392 2837681131
393 2889792731
394 2889916237
395 2894821208
396 2917556187
397 2937843447
398 2939673330
399 8045868740
400 8054566004

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12823

DUF3817

Domain of unknown function (DUF3817)

467

554

0.95

PF03023

MurJ

Lipid II flippase MurJ

28

468

0.91

PF14667

Polysacc_synt_C

Polysaccharide biosynthesis C-terminal domain

337

493

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7waw-assembly1.cif.gz_A murj inward closed form 0.9177 10 474
6nc6-assembly2.cif.gz_B lipid ii flippase murj, inward closed conformation 0.8954 10 471
6cc4-assembly1.cif.gz_A structure of murj from escherichia coli 0.8743 15 493
7waw-assembly1.cif.gz_A murj inward closed form 0.8455 10 474
6nc6-assembly2.cif.gz_B lipid ii flippase murj, inward closed conformation 0.8279 10 471
ID Description Score Start End Superfamily
af_P71616_19_179_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8467 243 399 1.20.1250.20
af_Q2G140_24_185_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8104 238 399 1.20.1250.20
af_P71616_19_179_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8037 243 399 1.20.1250.20
af_P0AAA7_285_416_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.796 303 442 1.20.1070.10
af_P76352_100_262_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7864 9 175 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1F8IB42-F1-model_v4 deleted 0.9675 1 371
AF-A0A4Q3JFM7-F1-model_v4 deleted 0.9675 1 210
AF-A0A1F8IB42-F1-model_v4 deleted 0.9624 1 371
AF-A0A7Z9NT97-F1-model_v4 Murein biosynthesis integral membrane protein MurJ 0.9528 4 261 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-A0A1Q7DFD9-F1-model_v4 Murein biosynthesis integral membrane protein MurJ 0.9514 3 440 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204

Map