F307215

General Info

Members Datasets Scaffolds Average Seq Length
200 141 200 158

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10027952|Ga0213876_100279523
Length 188
Sequence MLLRGAGGDSGENFLLPDRYAAGGEKFAVDSAAMIDDAQFKLAMSHFASGVTIVTTEAEGKAYGMTVASFASLSLHPPLVLVCIEKSTKTHEAIVAAQRFGVSILGLDQKDVSNRFASRADDKFAGIETWRGELELPLIANALTALECRVHQQLAGGDHSIFVGEVVSTKTREGQPLVYFRSGYREIV

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
78 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
79 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
112 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
115 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
116 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
121 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
122 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
123 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
133 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
134 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
135 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
136 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
137 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
138 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
141 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.5
Nodule 0
Rhizoplane 1
Rhizosphere 88
Stem 0
Stem Tuber 0
Unclassified 4.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_1446381 2162886012 Unclassified 819
2 JGI24743J22301_10016086 3300001991 Bacteria 1392
3 Ga0065704_10322036 3300005289 Unclassified 851
4 Ga0065715_10306358 3300005293 Archaea 1030
5 Ga0065707_10304256 3300005295 Unclassified 998
6 Ga0070658_10282761 3300005327 Bacteria 1412
7 Ga0070676_10339067 3300005328 Bacteria 1030
8 Ga0070683_100000046 3300005329 Bacteria 95134
9 Ga0070670_100011655 3300005331 Bacteria 7518
10 Ga0070670_100881294 3300005331 Bacteria 811
11 Ga0070677_10653869 3300005333 Bacteria 587
12 Ga0068869_100007701 3300005334 Bacteria 6900
13 Ga0070680_100069921 3300005336 Bacteria 2883
14 Ga0070682_100000004 3300005337 Bacteria 388780
15 Ga0070682_101121146 3300005337 Bacteria 660
16 Ga0068868_100114400 3300005338 Bacteria 2195
17 Ga0068868_102164382 3300005338 Unclassified 529
18 Ga0068868_102164383 3300005338 Unclassified 529
19 Ga0070689_100004977 3300005340 Bacteria 9024
20 Ga0070687_100021108 3300005343 Bacteria 3055
21 Ga0070687_100025699 3300005343 Bacteria 2828
22 Ga0070661_100615048 3300005344 Unclassified 879
23 Ga0070692_10014771 3300005345 Bacteria 3677
24 Ga0070675_100000003 3300005354 Bacteria 422595
25 Ga0070671_100132491 3300005355 Bacteria 2100
26 Ga0070673_100156411 3300005364 Bacteria 1935
27 Ga0070673_101473661 3300005364 Archaea 641
28 Ga0070709_10650749 3300005434 Bacteria 816
29 Ga0070713_101361575 3300005436 Bacteria 688
30 Ga0070701_10000146 3300005438 Bacteria 21575
31 Ga0070708_100093024 3300005445 Bacteria 2748
32 Ga0070678_100391321 3300005456 Bacteria 1205
33 Ga0068867_100195886 3300005459 Bacteria 1615
34 Ga0070685_10019924 3300005466 Bacteria 3626
35 Ga0070707_100020843 3300005468 Bacteria 6188
36 Ga0070707_100277625 3300005468 Bacteria 1628
37 Ga0070699_100152078 3300005518 Bacteria 2047
38 Ga0070684_100001189 3300005535 Bacteria 18707
39 Ga0070684_100477690 3300005535 Bacteria 1153
40 Ga0070697_100393742 3300005536 Unclassified 1201
41 Ga0068853_100548523 3300005539 Bacteria 1095
42 Ga0070672_100000026 3300005543 Bacteria 67028
43 Ga0070686_100456943 3300005544 Bacteria 983
44 Ga0070686_100896138 3300005544 Bacteria 721
45 Ga0070686_101012246 3300005544 Unclassified 682
46 Ga0070704_101384166 3300005549 Bacteria 645
47 Ga0068857_100874883 3300005577 Bacteria 861
48 Ga0068854_100001480 3300005578 Bacteria 14226
49 Ga0070702_100052509 3300005615 Bacteria 2338
50 Ga0070702_100173618 3300005615 Unclassified 1404
51 Ga0070702_100614323 3300005615 Bacteria 817
52 Ga0070702_100622218 3300005615 Bacteria 812
53 Ga0068852_100704156 3300005616 Bacteria 1020
54 Ga0068852_101118179 3300005616 Bacteria 808
55 Ga0068859_100647004 3300005617 Bacteria 1149
56 Ga0068864_100000001 3300005618 Bacteria 686767
57 Ga0068864_100390912 3300005618 Bacteria 1320
58 Ga0068861_100138241 3300005719 Bacteria 1985
59 Ga0068851_10054662 3300005834 Bacteria 2034
60 Ga0068851_10518894 3300005834 Bacteria 716
61 Ga0068870_10022238 3300005840 Unclassified 3114
62 Ga0068858_100000411 3300005842 Bacteria 44458
63 Ga0070717_10286876 3300006028 Unclassified 1461
64 Ga0070716_100022044 3300006173 Bacteria 3363
65 Ga0070716_100208496 3300006173 Bacteria 1304
66 Ga0070716_100262811 3300006173 Bacteria 1182
67 Ga0068871_100166072 3300006358 Bacteria 1889
68 Ga0068871_100889287 3300006358 Bacteria 825
69 Ga0068871_101101475 3300006358 Unclassified 742
70 Ga0075428_100003191 3300006844 Bacteria 17931
71 Ga0075428_100647347 3300006844 Bacteria 1127
72 Ga0075430_100411704 3300006846 Bacteria 1116
73 Ga0075431_100017736 3300006847 Bacteria 7238
74 Ga0075431_101281788 3300006847 Unclassified 694
75 Ga0075434_100081272 3300006871 Bacteria 3238
76 Ga0068865_100074112 3300006881 Bacteria 2423
77 Ga0075436_100103317 3300006914 Bacteria 1986
78 Ga0075436_100899173 3300006914 Unclassified 662
79 Ga0097620_100646922 3300006931 Bacteria 1149
80 Ga0075435_100309647 3300007076 Bacteria 1351
81 Ga0099794_10215016 3300007265 Bacteria 986
82 Ga0105240_10017283 3300009093 Bacteria 9726
83 Ga0105240_10433390 3300009093 Bacteria 1474
84 Ga0111539_10000003 3300009094 Bacteria 880006
85 Ga0105245_10000084 3300009098 Bacteria 94992
86 Ga0105245_10000256 3300009098 Bacteria 50649
87 Ga0105245_10000980 3300009098 Bacteria 26069
88 Ga0105245_10775764 3300009098 Bacteria 996
89 Ga0114129_10236110 3300009147 Bacteria 2460
90 Ga0105242_10023604 3300009176 Bacteria 4847
91 Ga0105238_10000010 3300009551 Bacteria 271274
92 Ga0105239_10146165 3300010375 Bacteria 2637
93 Ga0157371_10883628 3300013102 Bacteria 677
94 Ga0157369_10000065 3300013105 Bacteria 144865
95 Ga0157374_10000008 3300013296 Bacteria 588863
96 Ga0157378_10038334 3300013297 Bacteria 4247
97 Ga0157378_10086999 3300013297 Bacteria 2834
98 Ga0157378_10299227 3300013297 Bacteria 1557
99 Ga0157378_10315679 3300013297 Bacteria 1517
100 Ga0163162_10015518 3300013306 Bacteria 7445
101 Ga0157372_10214739 3300013307 Bacteria 2229
102 Ga0157375_10000028 3300013308 Bacteria 218924
103 Ga0157375_10000579 3300013308 Bacteria 32679
104 Ga0157375_10918111 3300013308 Unclassified 1019
105 Ga0163163_10335335 3300014325 Bacteria 1567
106 Ga0157380_10002807 3300014326 Bacteria 11842
107 Ga0157377_10000007 3300014745 Bacteria 402005
108 Ga0157377_10001863 3300014745 Bacteria 9228
109 Ga0157377_10218735 3300014745 Bacteria 1218
110 Ga0157376_10000002 3300014969 Bacteria 684532
111 Ga0213873_10001958 3300021358 Bacteria 3514
112 Ga0213876_10000008 3300021384 Bacteria 506740
113 Ga0213876_10027952 3300021384 Bacteria 2974
114 Ga0213876_10248903 3300021384 Bacteria 944
115 Ga0207699_10285216 3300025906 Bacteria 1149
116 Ga0207645_10414993 3300025907 Bacteria 906
117 Ga0207643_10020236 3300025908 Bacteria 3651
118 Ga0207684_10209606 3300025910 Unclassified 1681
119 Ga0207695_10013190 3300025913 Bacteria 9862
120 Ga0207695_10957732 3300025913 Bacteria 735
121 Ga0207662_10036857 3300025918 Bacteria 2860
122 Ga0207646_10042699 3300025922 Bacteria 4073
123 Ga0207694_10000002 3300025924 Bacteria 1165763
124 Ga0207694_10000003 3300025924 Bacteria 1165533
125 Ga0207650_10000035 3300025925 Bacteria 215488
126 Ga0207650_10408808 3300025925 Bacteria 1125
127 Ga0207659_10000006 3300025926 Bacteria 384976
128 Ga0207687_10000019 3300025927 Bacteria 234280
129 Ga0207687_10000366 3300025927 Bacteria 30170
130 Ga0207687_10000455 3300025927 Bacteria 27908
131 Ga0207687_10775891 3300025927 Bacteria 817
132 Ga0207644_10110593 3300025931 Bacteria 2077
133 Ga0207686_10020201 3300025934 Bacteria 3802
134 Ga0207670_10001718 3300025936 Bacteria 11434
135 Ga0207665_10112038 3300025939 Bacteria 1918
136 Ga0207665_10380768 3300025939 Bacteria 1071
137 Ga0207691_10001177 3300025940 Bacteria 26004
138 Ga0207689_10012986 3300025942 Bacteria 7112
139 Ga0207661_10000002 3300025944 Bacteria 816104
140 Ga0207651_10025091 3300025960 Bacteria 3701
141 Ga0207640_10000913 3300025981 Bacteria 16540
142 Ga0207640_10005074 3300025981 Bacteria 7165
143 Ga0207640_10812285 3300025981 Bacteria 811
144 Ga0207677_10000012 3300026023 Bacteria 194702
145 Ga0207677_10000418 3300026023 Bacteria 28980
146 Ga0207703_10000016 3300026035 Bacteria 285487
147 Ga0207639_10000198 3300026041 Bacteria 45415
148 Ga0207639_10556492 3300026041 Bacteria 1054
149 Ga0207648_10067470 3300026089 Bacteria 3118
150 Ga0207648_10144177 3300026089 Bacteria 2100
151 Ga0207676_10000002 3300026095 Bacteria 1198607
152 Ga0207674_11131977 3300026116 Bacteria 752
153 Ga0207675_100287775 3300026118 Bacteria 1598
154 Ga0207698_10539916 3300026142 Bacteria 1141
155 Ga0207428_10000001 3300027907 Bacteria 1034622
156 Ga0307511_10002757 3300030521 Bacteria 18261
157 Ga0307410_10992118 3300031852 Unclassified 724
158 Ga0307416_100493055 3300032002 Bacteria 1288
159 Ga0373932_0000854 3300035112 Bacteria 8984
160 Ga0373947_0716029 3300035725 Bacteria 683
161 Ga0436365_0237159 3300039437 Bacteria 5925
162 Ga0436365_1347761 3300039437 Bacteria 136063
163 Ga0436365_1476958 3300039437 Bacteria 593
164 Ga0436365_1769761 3300039437 Bacteria 10907
165 Ga0436363_0784580 3300039450 Bacteria 1208
166 Ga0436362_0235247 3300039453 Bacteria 31191
167 Ga0436362_0427287 3300039453 Bacteria 1245
168 Ga0451793_0566711 3300041452 Bacteria 946
169 Ga0451577_0956647 3300042876 Bacteria 770
170 Ga0453683_0446604 3300044673 Bacteria 836
171 Ga0451576_1316198 3300045051 Unclassified 753
172 Ga0495620_0027309 3300046515 Bacteria 2672
173 Ga0495642_0262314 3300046528 Bacteria 756
174 Ga0495621_0022238 3300046539 Bacteria 2100
175 Ga0495621_0318597 3300046539 Unclassified 647
176 Ga0495668_0080736 3300046616 Bacteria 1785
177 Ga0496112_1106459 3300048915 Bacteria 710
178 Ga0501073_0000360 3300049589 Bacteria 30642
179 Ga0501080_0041939 3300049742 Bacteria 4263
180 nmdc:mga05p37_94077_c1 3300050507 Bacteria 3692
181 nmdc:mga0qj67_658611_c1 3300050509 Bacteria 835
182 nmdc:mga06r32_1233178_c1 3300050510 Unclassified 693
183 nmdc:mga06r32_604136_c1 3300050510 Bacteria 1068
184 nmdc:mga08y16_1_c1 3300050511 Bacteria 1034622
185 nmdc:mga0n895_300056_c1 3300050512 Bacteria 1628
186 nmdc:mga0n895_49613_c1 3300050512 Bacteria 4113
187 nmdc:mga0rr50_329043_c1 3300050513 Bacteria 1282
188 Ga0500643_000316 3300053087 Bacteria 39239
189 Ga0500643_012185 3300053087 Bacteria 3089
190 Ga0500641_0000796 3300053096 Bacteria 11401
191 Ga0500650_0151937 3300053098 Bacteria 1070
192 Ga0500556_0002678 3300053104 Bacteria 5540
193 Ga0500562_010405 3300053108 Bacteria 2357
194 Ga0500655_069727 3300053133 Unclassified 715
195 Ga0500616_0014486 3300053153 Bacteria 4531
196 Ga0500622_0009080 3300053156 Bacteria 5521
197 Ga0500622_0009924 3300053156 Bacteria 5253
198 Ga0500645_001015 3300053730 Bacteria 15775
199 Ga0500645_002871 3300053730 Bacteria 7378
200 Ga0500645_087714 3300053730 Bacteria 884

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053133 Ga0500655_069727 Ga0500655_069727_249_695 145
2 3300005615 Ga0070702_100173618 Ga0070702_1001736182 149
3 3300005615 Ga0070702_100052509 Ga0070702_1000525093 154
4 3300005834 Ga0068851_10054662 Ga0068851_100546623 154
5 3300009098 Ga0105245_10000980 Ga0105245_100009804 154
6 3300010375 Ga0105239_10146165 Ga0105239_101461652 154
7 3300013306 Ga0163162_10015518 Ga0163162_100155186 154
8 3300025927 Ga0207687_10000455 Ga0207687_1000045515 154
9 3300039453 Ga0436362_0427287 Ga0436362_0427287_70_555 154
10 3300005336 Ga0070680_100069921 Ga0070680_1000699212 155
11 3300005616 Ga0068852_100704156 Ga0068852_1007041562 155
12 3300005719 Ga0068861_100138241 Ga0068861_1001382413 155
13 3300009093 Ga0105240_10433390 Ga0105240_104333902 155
14 3300025913 Ga0207695_10957732 Ga0207695_109577321 155
15 3300026118 Ga0207675_100287775 Ga0207675_1002877752 155
16 3300031852 Ga0307410_10992118 Ga0307410_109921182 155
17 3300039450 Ga0436363_0784580 Ga0436363_0784580_157_627 155
18 3300001991 JGI24743J22301_10016086 JGI24743J22301_100160862 156
19 3300005289 Ga0065704_10322036 Ga0065704_103220362 156
20 3300005295 Ga0065707_10304256 Ga0065707_103042562 156
21 3300005327 Ga0070658_10282761 Ga0070658_102827612 156
22 3300005328 Ga0070676_10339067 Ga0070676_103390672 156
23 3300005329 Ga0070683_100000046 Ga0070683_10000004654 156
24 3300005331 Ga0070670_100011655 Ga0070670_1000116551 156
25 3300005331 Ga0070670_100881294 Ga0070670_1008812942 156
26 3300005333 Ga0070677_10653869 Ga0070677_106538691 156
27 3300005334 Ga0068869_100007701 Ga0068869_1000077015 156
28 3300005337 Ga0070682_100000004 Ga0070682_100000004250 156
29 3300005337 Ga0070682_101121146 Ga0070682_1011211461 156
30 3300005338 Ga0068868_100114400 Ga0068868_1001144003 156
31 3300005338 Ga0068868_102164382 Ga0068868_1021643821 156
32 3300005338 Ga0068868_102164383 Ga0068868_1021643831 156
33 3300005340 Ga0070689_100004977 Ga0070689_1000049774 156
34 3300005343 Ga0070687_100021108 Ga0070687_1000211083 156
35 3300005343 Ga0070687_100025699 Ga0070687_1000256992 156
36 3300005344 Ga0070661_100615048 Ga0070661_1006150481 156
37 3300005345 Ga0070692_10014771 Ga0070692_100147712 156
38 3300005354 Ga0070675_100000003 Ga0070675_10000000337 156
39 3300005355 Ga0070671_100132491 Ga0070671_1001324912 156
40 3300005364 Ga0070673_100156411 Ga0070673_1001564112 156
41 3300005364 Ga0070673_101473661 Ga0070673_1014736611 156
42 3300005434 Ga0070709_10650749 Ga0070709_106507492 156
43 3300005436 Ga0070713_101361575 Ga0070713_1013615751 156
44 3300005438 Ga0070701_10000146 Ga0070701_100001469 156
45 3300005445 Ga0070708_100093024 Ga0070708_1000930242 156
46 3300005456 Ga0070678_100391321 Ga0070678_1003913212 156
47 3300005459 Ga0068867_100195886 Ga0068867_1001958861 156
48 3300005466 Ga0070685_10019924 Ga0070685_100199243 156
49 3300005468 Ga0070707_100020843 Ga0070707_1000208432 156
50 3300005468 Ga0070707_100277625 Ga0070707_1002776251 156
51 3300005518 Ga0070699_100152078 Ga0070699_1001520783 156
52 3300005535 Ga0070684_100001189 Ga0070684_1000011891 156
53 3300005535 Ga0070684_100477690 Ga0070684_1004776901 156
54 3300005536 Ga0070697_100393742 Ga0070697_1003937422 156
55 3300005539 Ga0068853_100548523 Ga0068853_1005485232 156
56 3300005543 Ga0070672_100000026 Ga0070672_10000002637 156
57 3300005544 Ga0070686_100456943 Ga0070686_1004569432 156
58 3300005544 Ga0070686_100896138 Ga0070686_1008961381 156
59 3300005544 Ga0070686_101012246 Ga0070686_1010122461 156
60 3300005549 Ga0070704_101384166 Ga0070704_1013841662 156
61 3300005577 Ga0068857_100874883 Ga0068857_1008748832 156
62 3300005578 Ga0068854_100001480 Ga0068854_10000148014 156
63 3300005615 Ga0070702_100614323 Ga0070702_1006143232 156
64 3300005615 Ga0070702_100622218 Ga0070702_1006222181 156
65 3300005616 Ga0068852_101118179 Ga0068852_1011181792 156
66 3300005617 Ga0068859_100647004 Ga0068859_1006470042 156
67 3300005618 Ga0068864_100000001 Ga0068864_1000000014 156
68 3300005618 Ga0068864_100390912 Ga0068864_1003909122 156
69 3300005834 Ga0068851_10518894 Ga0068851_105188942 156
70 3300005840 Ga0068870_10022238 Ga0068870_100222384 156
71 3300005842 Ga0068858_100000411 Ga0068858_10000041130 156
72 3300006028 Ga0070717_10286876 Ga0070717_102868762 156
73 3300006173 Ga0070716_100022044 Ga0070716_1000220443 156
74 3300006173 Ga0070716_100208496 Ga0070716_1002084962 156
75 3300006173 Ga0070716_100262811 Ga0070716_1002628112 156
76 3300006358 Ga0068871_100166072 Ga0068871_1001660722 156
77 3300006358 Ga0068871_100889287 Ga0068871_1008892872 156
78 3300006358 Ga0068871_101101475 Ga0068871_1011014751 156
79 3300006844 Ga0075428_100003191 Ga0075428_1000031916 156
80 3300006846 Ga0075430_100411704 Ga0075430_1004117041 156
81 3300006847 Ga0075431_101281788 Ga0075431_1012817882 156
82 3300006871 Ga0075434_100081272 Ga0075434_1000812723 156
83 3300006881 Ga0068865_100074112 Ga0068865_1000741123 156
84 3300006914 Ga0075436_100103317 Ga0075436_1001033173 156
85 3300006914 Ga0075436_100899173 Ga0075436_1008991731 156
86 3300006931 Ga0097620_100646922 Ga0097620_1006469222 156
87 3300007076 Ga0075435_100309647 Ga0075435_1003096472 156
88 3300007265 Ga0099794_10215016 Ga0099794_102150161 156
89 3300009093 Ga0105240_10017283 Ga0105240_100172836 156
90 3300009094 Ga0111539_10000003 Ga0111539_10000003269 156
91 3300009098 Ga0105245_10000084 Ga0105245_1000008450 156
92 3300009098 Ga0105245_10000256 Ga0105245_1000025619 156
93 3300009098 Ga0105245_10775764 Ga0105245_107757642 156
94 3300009147 Ga0114129_10236110 Ga0114129_102361102 156
95 3300009176 Ga0105242_10023604 Ga0105242_100236044 156
96 3300009551 Ga0105238_10000010 Ga0105238_10000010135 156
97 3300013102 Ga0157371_10883628 Ga0157371_108836281 156
98 3300013105 Ga0157369_10000065 Ga0157369_1000006544 156
99 3300013296 Ga0157374_10000008 Ga0157374_10000008479 156
100 3300013297 Ga0157378_10038334 Ga0157378_100383346 156
101 3300013297 Ga0157378_10086999 Ga0157378_100869993 156
102 3300013297 Ga0157378_10299227 Ga0157378_102992272 156
103 3300013297 Ga0157378_10315679 Ga0157378_103156792 156
104 3300013307 Ga0157372_10214739 Ga0157372_102147393 156
105 3300013308 Ga0157375_10000028 Ga0157375_10000028132 156
106 3300013308 Ga0157375_10000579 Ga0157375_100005793 156
107 3300013308 Ga0157375_10918111 Ga0157375_109181112 156
108 3300014325 Ga0163163_10335335 Ga0163163_103353352 156
109 3300014326 Ga0157380_10002807 Ga0157380_100028076 156
110 3300014745 Ga0157377_10000007 Ga0157377_10000007289 156
111 3300014745 Ga0157377_10001863 Ga0157377_100018639 156
112 3300014745 Ga0157377_10218735 Ga0157377_102187352 156
113 3300014969 Ga0157376_10000002 Ga0157376_10000002155 156
114 3300021358 Ga0213873_10001958 Ga0213873_100019584 156
115 3300021384 Ga0213876_10000008 Ga0213876_10000008133 156
116 3300021384 Ga0213876_10027952 Ga0213876_100279523 156
117 3300021384 Ga0213876_10248903 Ga0213876_102489031 156
118 3300025906 Ga0207699_10285216 Ga0207699_102852162 156
119 3300025907 Ga0207645_10414993 Ga0207645_104149932 156
120 3300025908 Ga0207643_10020236 Ga0207643_100202361 156
121 3300025910 Ga0207684_10209606 Ga0207684_102096062 156
122 3300025913 Ga0207695_10013190 Ga0207695_1001319012 156
123 3300025918 Ga0207662_10036857 Ga0207662_100368573 156
124 3300025922 Ga0207646_10042699 Ga0207646_100426994 156
125 3300025924 Ga0207694_10000002 Ga0207694_10000002311 156
126 3300025924 Ga0207694_10000003 Ga0207694_10000003789 156
127 3300025925 Ga0207650_10000035 Ga0207650_10000035175 156
128 3300025925 Ga0207650_10408808 Ga0207650_104088081 156
129 3300025926 Ga0207659_10000006 Ga0207659_10000006332 156
130 3300025927 Ga0207687_10000019 Ga0207687_10000019166 156
131 3300025927 Ga0207687_10000366 Ga0207687_1000036620 156
132 3300025927 Ga0207687_10775891 Ga0207687_107758911 156
133 3300025931 Ga0207644_10110593 Ga0207644_101105932 156
134 3300025934 Ga0207686_10020201 Ga0207686_100202014 156
135 3300025936 Ga0207670_10001718 Ga0207670_100017186 156
136 3300025939 Ga0207665_10112038 Ga0207665_101120382 156
137 3300025939 Ga0207665_10380768 Ga0207665_103807682 156
138 3300025940 Ga0207691_10001177 Ga0207691_100011774 156
139 3300025942 Ga0207689_10012986 Ga0207689_100129866 156
140 3300025944 Ga0207661_10000002 Ga0207661_10000002429 156
141 3300025960 Ga0207651_10025091 Ga0207651_100250915 156
142 3300025981 Ga0207640_10000913 Ga0207640_1000091313 156
143 3300025981 Ga0207640_10005074 Ga0207640_100050748 156
144 3300025981 Ga0207640_10812285 Ga0207640_108122852 156
145 3300026023 Ga0207677_10000012 Ga0207677_1000001279 156
146 3300026023 Ga0207677_10000418 Ga0207677_1000041811 156
147 3300026035 Ga0207703_10000016 Ga0207703_10000016152 156
148 3300026041 Ga0207639_10000198 Ga0207639_1000019813 156
149 3300026041 Ga0207639_10556492 Ga0207639_105564922 156
150 3300026089 Ga0207648_10067470 Ga0207648_100674702 156
151 3300026089 Ga0207648_10144177 Ga0207648_101441772 156
152 3300026095 Ga0207676_10000002 Ga0207676_10000002830 156
153 3300026116 Ga0207674_11131977 Ga0207674_111319771 156
154 3300026142 Ga0207698_10539916 Ga0207698_105399162 156
155 3300027907 Ga0207428_10000001 Ga0207428_10000001420 156
156 3300030521 Ga0307511_10002757 Ga0307511_1000275714 156
157 3300032002 Ga0307416_100493055 Ga0307416_1004930552 156
158 3300035112 Ga0373932_0000854 Ga0373932_0000854_1353_1826 156
159 3300035725 Ga0373947_0716029 Ga0373947_0716029_32_505 156
160 3300039437 Ga0436365_0237159 Ga0436365_0237159_4155_4760 156
161 3300039437 Ga0436365_1347761 Ga0436365_1347761_120823_121296 156
162 3300039437 Ga0436365_1476958 Ga0436365_1476958_85_558 156
163 3300039437 Ga0436365_1769761 Ga0436365_1769761_7908_8381 156
164 3300039453 Ga0436362_0235247 Ga0436362_0235247_22589_23062 156
165 3300041452 Ga0451793_0566711 Ga0451793_0566711_91_564 156
166 3300042876 Ga0451577_0956647 Ga0451577_0956647_221_694 156
167 3300044673 Ga0453683_0446604 Ga0453683_0446604_294_767 156
168 3300045051 Ga0451576_1316198 Ga0451576_1316198_28_501 156
169 3300046528 Ga0495642_0262314 Ga0495642_0262314_265_738 156
170 3300046539 Ga0495621_0022238 Ga0495621_0022238_628_1101 156
171 3300046539 Ga0495621_0318597 Ga0495621_0318597_158_628 156
172 3300046616 Ga0495668_0080736 Ga0495668_0080736_98_607 156
173 3300048915 Ga0496112_1106459 Ga0496112_1106459_34_507 156
174 3300049589 Ga0501073_0000360 Ga0501073_0000360_28235_28705 156
175 3300049742 Ga0501080_0041939 Ga0501080_0041939_1229_1699 156
176 3300050507 nmdc:mga05p37_94077_c1 nmdc:mga05p37_94077_c1_1126_1599 156
177 3300050509 nmdc:mga0qj67_658611_c1 nmdc:mga0qj67_658611_c1_103_573 156
178 3300050510 nmdc:mga06r32_1233178_c1 nmdc:mga06r32_1233178_c1_110_580 156
179 3300050511 nmdc:mga08y16_1_c1 nmdc:mga08y16_1_c1_579992_580462 156
180 3300050512 nmdc:mga0n895_300056_c1 nmdc:mga0n895_300056_c1_11_484 156
181 3300050512 nmdc:mga0n895_49613_c1 nmdc:mga0n895_49613_c1_1907_2392 156
182 3300050513 nmdc:mga0rr50_329043_c1 nmdc:mga0rr50_329043_c1_343_816 156
183 3300053087 Ga0500643_000316 Ga0500643_000316_37420_37929 156
184 3300053087 Ga0500643_012185 Ga0500643_012185_2399_2908 156
185 3300053096 Ga0500641_0000796 Ga0500641_0000796_5838_6347 156
186 3300053098 Ga0500650_0151937 Ga0500650_0151937_457_966 156
187 3300053104 Ga0500556_0002678 Ga0500556_0002678_985_1494 156
188 3300053108 Ga0500562_010405 Ga0500562_010405_82_591 156
189 3300053153 Ga0500616_0014486 Ga0500616_0014486_1831_2340 156
190 3300053156 Ga0500622_0009080 Ga0500622_0009080_2908_3417 156
191 3300053156 Ga0500622_0009924 Ga0500622_0009924_109_660 156
192 3300053730 Ga0500645_001015 Ga0500645_001015_411_920 156
193 3300053730 Ga0500645_002871 Ga0500645_002871_1044_1553 156
194 3300053730 Ga0500645_087714 Ga0500645_087714_178_687 156
195 2162886012 MBSR1b_contig_1446381 MBSR1b_0438.00004270 157
196 3300005293 Ga0065715_10306358 Ga0065715_103063581 157
197 3300006844 Ga0075428_100647347 Ga0075428_1006473472 157
198 3300006847 Ga0075431_100017736 Ga0075431_1000177362 157
199 3300046515 Ga0495620_0027309 Ga0495620_0027309_1099_1584 157
200 3300050510 nmdc:mga06r32_604136_c1 nmdc:mga06r32_604136_c1_572_1054 157

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01613

Flavin_Reduct

Flavin reductase like domain

44

188

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1i0s-assembly1.cif.gz_A archaeoglobus fulgidus ferric reductase complex with nadp+ 0.9387 17 145
3zoe-assembly1.cif.gz_A crystal structure of fmn-binding protein (yp_005476) from thermus thermophilus with bound p-hydroxybenzaldehyde 0.8942 14 142
2r6v-assembly1.cif.gz_A crystal structure of fmn-binding protein (np_142786.1) from pyrococcus horikoshii at 1.35 a resolution 0.893 17 157
3nfw-assembly1.cif.gz_A crystal structure of nitrilotriacetate monooxygenase component b (a0r521 homolog) from mycobacterium thermoresistibile 0.8754 6 157
3bnk-assembly1.cif.gz_A x-ray crystal structure of flavoredoxin from methanosarcina acetivorans 0.8708 17 154
ID Description Score Start End Superfamily
1i0sA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9387 17 145 2.30.110.10
2r6vA01 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8831 18 145 2.30.110.10
3nfwA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8753 6 157 2.30.110.10
3bnkA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8708 17 154 2.30.110.10
af_A0A1D8PG03_19_199_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8708 17 155 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A109CBU8-F1-model_v4 deleted 0.9613 40 157
AF-A0A7Y3A8P3-F1-model_v4 Flavin reductase 0.9598 20 155 GO:0010181
GO:0042602
AF-A0A529HUM0-F1-model_v4 Flavin reductase family protein 0.9591 35 157 GO:0010181
GO:0042602
AF-A0A1Q5GB90-F1-model_v4 Flavin reductase like domain-containing protein 0.9577 17 154 GO:0006208
GO:0010181
GO:0042602
AF-A0A6N7FX88-F1-model_v4 Flavin reductase 0.9522 33 157 GO:0010181
GO:0042602

Feature Viewer

pLDDT pTM Quality
90.71 0.87 High
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Predicted Structure (AlphaFold2)

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