F306633

General Info

Members Datasets Scaffolds Average Seq Length
200 118 193 686

Family's Representative Sequence

Representative Sequence 3300005262|Ga0065165_1001832|Ga0065165_10018324
Length 744
Sequence MILHGRAVGETAQKIPVVPNAPATYIWCFQCAARHPVGSIITEKMSTTTPRKRYPTPQRLLGMLLLVTAATTGFSQQAPAPIGPVPSENQMRWQEMEYYAFVHFSLNTYTDQSWGFGNESLSLFNPAKLDCRQWVRVCKEAGMKGIILTAKHHSGFCLWPSKYTEYSVKNVPWKNGKGDIVREMADACKEYGLKLGIYLSPWDRNHPEYGKPEYITYFRNQLTELLTQYGPIFEIWFDGANGGSGYYGGANEKRTIDRTTYYDWSNTYKMIRGLQPDIVIWNDGGDRGDLRWVGTEAGYVGETNWSLLNATGEVTENMLHHGLENGNAWVPAEVNTSIRPEWFYHPSEDTKVKTLPELMDTYYNSIGRNATLLMNFPIDTTGLIHPNDERAALDFAEAVKNAFAVNLIANAEGSASNVRGGAKEFDAAKATDGDKRTFWTTDDAVKSASLTYDFATPTAFNRFLVQEYIRLGQRVKAFTVEALVDGQWKVLASATTIGYKRILRFPTVRATKIRLNITDAKSAPVISNIGVYLAPQILTSPRIMRNQAGEVSLVPADRESVLYYTLDNREPGPNTKKYTGPFKTDGKVEIRTVAYDPASGRKSPVAHEKFDLPRKSWKIIGAPDDKAYNLLDGNPATAWHQGRDKKLPLDLIIDLGKEQTISGFRYLPDQGSWGVITHYQFHISNDNKKWKQVDQGEFSNIKNNPVWQIKKLKPAKARYIKLTAVSNTAGNSNVGYAEVDIITD

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
3 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
4 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
5 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
6 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
7 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
8 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
9 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
10 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
59 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
60 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
88 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
89 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
96 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
97 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
102 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
113 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
114 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
115 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
116 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
117 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
118 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.5
Metatranscriptomes 0
Isolates 3.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10
Nodule 0
Rhizoplane 0
Rhizosphere 76.5
Stem 0
Stem Tuber 0
Unclassified 13.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10001011 3300001979 Bacteria 12573
2 JGI24739J22299_10000708 3300001989 Bacteria 12098
3 JGI25154J39366_1000008 3300002738 Bacteria 315375
4 JGI25157J39369_1002200 3300002741 Bacteria 5352
5 JGI25153J46596_10011469 3300003215 Bacteria 3913
6 JGI25153J46596_10018503 3300003215 Bacteria 2703
7 rootH1_10003378 3300003316 Bacteria 23277
8 rootH1_10041803 3300003316 Bacteria 12653
9 rootH2_10032267 3300003320 Bacteria 7107
10 rootH2_10045029 3300003320 Bacteria 24543
11 rootH2_10094755 3300003320 Bacteria 5015
12 rootL2_10013561 3300003322 Bacteria 11797
13 rootL2_10114467 3300003322 Bacteria 3519
14 rootH1_10002995 3300003323 Bacteria 6561
15 rootH1_10015180 3300003323 Bacteria 15056
16 rootH1_10021531 3300003323 Bacteria 29001
17 rootH1_10022931 3300003323 Bacteria 51976
18 rootH1_10037634 3300003323 Bacteria 14411
19 JGI25160J50197_1009244 3300003354 Bacteria 3676
20 Ga0065165_1001832 3300005262 Bacteria 20763
21 Ga0070658_10000060 3300005327 Bacteria 112561
22 Ga0070676_10026675 3300005328 Bacteria 3271
23 Ga0070666_10000130 3300005335 Bacteria 53093
24 Ga0070668_100029514 3300005347 Bacteria 4166
25 Ga0070673_100047065 3300005364 Bacteria 3354
26 Ga0070678_100004534 3300005456 Bacteria 7887
27 Ga0068867_100001410 3300005459 Bacteria 16603
28 Ga0070698_100106119 3300005471 Bacteria 2778
29 Ga0068853_100000882 3300005539 Bacteria 20953
30 Ga0068853_100021662 3300005539 Bacteria 5362
31 Ga0068853_100046379 3300005539 Bacteria 3726
32 Ga0068855_100000339 3300005563 Bacteria 58113
33 Ga0068855_100002297 3300005563 Bacteria 23625
34 Ga0068855_100020684 3300005563 Bacteria 7892
35 Ga0068856_100038054 3300005614 Bacteria 4721
36 Ga0068856_100107685 3300005614 Unclassified 2783
37 Ga0068852_100041134 3300005616 Bacteria 3904
38 Ga0068859_100000245 3300005617 Bacteria 53529
39 Ga0068859_100000887 3300005617 Bacteria 30479
40 Ga0068859_100013484 3300005617 Bacteria 8196
41 Ga0068859_100058441 3300005617 Bacteria 3885
42 Ga0068866_10005605 3300005718 Bacteria 5195
43 Ga0068866_10008745 3300005718 Unclassified 4279
44 Ga0068863_100041718 3300005841 Bacteria 4363
45 Ga0068863_100094627 3300005841 Bacteria 2835
46 Ga0068858_100005732 3300005842 Bacteria 12139
47 Ga0068860_100000026 3300005843 Bacteria 270483
48 Ga0068860_100000788 3300005843 Bacteria 35453
49 Ga0068860_100001305 3300005843 Bacteria 27098
50 Ga0068860_100021792 3300005843 Bacteria 6199
51 Ga0097621_100000369 3300006237 Bacteria 31242
52 Ga0068871_100000513 3300006358 Bacteria 26609
53 Ga0068871_100014890 3300006358 Bacteria 5811
54 Ga0068865_100000626 3300006881 Bacteria 19886
55 Ga0068865_100038773 3300006881 Unclassified 3227
56 Ga0097620_100000245 3300006931 Bacteria 53529
57 Ga0097620_100000887 3300006931 Bacteria 30479
58 Ga0097620_100013484 3300006931 Bacteria 8196
59 Ga0097620_100058441 3300006931 Bacteria 3885
60 Ga0105240_10021462 3300009093 Bacteria 8587
61 Ga0105240_10033888 3300009093 Bacteria 6594
62 Ga0105245_10055232 3300009098 Bacteria 3567
63 Ga0105247_10000259 3300009101 Bacteria 48820
64 Ga0105247_10009903 3300009101 Bacteria 5774
65 Ga0114129_10063119 3300009147 Bacteria 5174
66 Ga0105242_10008865 3300009176 Bacteria 7718
67 Ga0105237_10000347 3300009545 Bacteria 65298
68 Ga0105237_10000993 3300009545 Bacteria 38153
69 Ga0105237_10003997 3300009545 Bacteria 17242
70 Ga0105237_10021711 3300009545 Bacteria 6596
71 Ga0105238_10015673 3300009551 Bacteria 7673
72 Ga0105249_10004041 3300009553 Bacteria 12650
73 Ga0105249_10008887 3300009553 Bacteria 8774
74 Ga0105249_10086858 3300009553 Unclassified 2917
75 Ga0105239_10000036 3300010375 Bacteria 212090
76 Ga0105239_10000119 3300010375 Bacteria 111612
77 Ga0105239_10003997 3300010375 Bacteria 17860
78 Ga0105239_10008596 3300010375 Bacteria 11579
79 Ga0105239_10019126 3300010375 Bacteria 7570
80 Ga0105239_10026389 3300010375 Bacteria 6393
81 Ga0157370_10000022 3300013104 Bacteria 163793
82 Ga0157370_10001350 3300013104 Bacteria 30426
83 Ga0157374_10000029 3300013296 Bacteria 211547
84 Ga0157374_10000599 3300013296 Bacteria 31938
85 Ga0157378_10111485 3300013297 Bacteria 2509
86 Ga0163162_10000219 3300013306 Bacteria 52440
87 Ga0157372_10049807 3300013307 Bacteria 4659
88 Ga0157372_10079605 3300013307 Bacteria 3706
89 Ga0182008_10000168 3300014497 Bacteria 51118
90 Ga0157376_10001877 3300014969 Bacteria 14019
91 Ga0157376_10002722 3300014969 Bacteria 12048
92 Ga0183373_1001 3300015682 Bacteria 1410374
93 Ga0163161_10001120 3300017792 Bacteria 20217
94 Ga0209436_100572 3300025208 Bacteria 15845
95 Ga0209646_1000045 3300025246 Bacteria 333765
96 Ga0209646_1003449 3300025246 Bacteria 3127
97 Ga0209026_1000241 3300025250 Bacteria 70485
98 Ga0209455_1008300 3300025272 Bacteria 2834
99 Ga0209130_1001256 3300025284 Bacteria 17690
100 Ga0209564_1001876 3300025295 Bacteria 18952
101 Ga0209758_1002806 3300025297 Bacteria 16991
102 Ga0209758_1003742 3300025297 Bacteria 13473
103 Ga0207426_1000203 3300025302 Bacteria 142379
104 Ga0207426_1000241 3300025302 Bacteria 122857
105 Ga0207426_1000284 3300025302 Bacteria 103307
106 Ga0207426_1002688 3300025302 Bacteria 10866
107 Ga0207710_10000244 3300025900 Bacteria 46212
108 Ga0207710_10020072 3300025900 Bacteria 2854
109 Ga0207680_10000090 3300025903 Bacteria 41836
110 Ga0207645_10001515 3300025907 Bacteria 18982
111 Ga0207705_10000233 3300025909 Bacteria 55125
112 Ga0207654_10001052 3300025911 Bacteria 15064
113 Ga0207671_10000792 3300025914 Bacteria 40046
114 Ga0207671_10000907 3300025914 Bacteria 37431
115 Ga0207704_10000705 3300025938 Bacteria 14720
116 Ga0207689_10026175 3300025942 Bacteria 4885
117 Ga0207667_10054205 3300025949 Bacteria 4218
118 Ga0207667_10100410 3300025949 Bacteria 2985
119 Ga0207712_10005912 3300025961 Bacteria 7715
120 Ga0207677_10014366 3300026023 Bacteria 4622
121 Ga0207703_10001108 3300026035 Bacteria 25543
122 Ga0207639_10004990 3300026041 Bacteria 8939
123 Ga0207639_10025470 3300026041 Bacteria 4289
124 Ga0207702_10081480 3300026078 Unclassified 2811
125 Ga0207641_10000089 3300026088 Bacteria 128603
126 Ga0207641_10046267 3300026088 Bacteria 3667
127 Ga0207648_10002167 3300026089 Bacteria 21343
128 Ga0207648_10008518 3300026089 Bacteria 9926
129 Ga0207676_10106821 3300026095 Bacteria 2333
130 Ga0207683_10008065 3300026121 Bacteria 9005
131 Ga0207698_10000765 3300026142 Bacteria 18704
132 Ga0268265_10053233 3300028380 Bacteria 3066
133 Ga0268264_10000117 3300028381 Bacteria 195037
134 Ga0268264_10001140 3300028381 Bacteria 26028
135 Ga0268264_10003262 3300028381 Bacteria 14032
136 Ga0268264_10010840 3300028381 Bacteria 7531
137 Ga0307515_10000076 3300028794 Bacteria 228736
138 Ga0307515_10000349 3300028794 Bacteria 114163
139 Ga0307515_10002439 3300028794 Bacteria 40495
140 Ga0265324_10000701 3300029957 Bacteria 22350
141 Ga0316177_1006717 3300030731 Bacteria 5477
142 Ga0316176_1060807 3300030732 Bacteria 11857
143 Ga0265327_10000054 3300031251 Bacteria 250337
144 Ga0265327_10000592 3300031251 Bacteria 60613
145 Ga0307408_100000512 3300031548 Bacteria 33436
146 Ga0307408_100000675 3300031548 Bacteria 28363
147 Ga0307406_10008216 3300031901 Bacteria 5817
148 Ga0307412_10002164 3300031911 Bacteria 10903
149 Ga0307409_100007538 3300031995 Bacteria 6519
150 Ga0451577_0000285 3300042876 Bacteria 98289
151 Ga0451577_0000551 3300042876 Bacteria 61145
152 Ga0451577_0014240 3300042876 Bacteria 7414
153 Ga0451577_0049678 3300042876 Bacteria 3745
154 Ga0466972_0000002 3300044658 Bacteria 408005
155 Ga0466972_0000036 3300044658 Bacteria 146007
156 Ga0453683_0000139 3300044673 Bacteria 105329
157 Ga0453683_0000261 3300044673 Bacteria 69377
158 Ga0453684_0000340 3300044712 Bacteria 194264
159 Ga0453684_0001157 3300044712 Bacteria 82273
160 Ga0453684_0002617 3300044712 Bacteria 43014
161 Ga0453684_0008603 3300044712 Bacteria 18201
162 Ga0453684_0012996 3300044712 Bacteria 13611
163 Ga0453684_0028742 3300044712 Bacteria 7918
164 Ga0453684_0051819 3300044712 Bacteria 5373
165 Ga0453684_0059565 3300044712 Bacteria 4920
166 Ga0453684_0076370 3300044712 Bacteria 4206
167 Ga0453684_0078313 3300044712 Bacteria 4137
168 Ga0453684_0085952 3300044712 Bacteria 3906
169 Ga0453684_0112775 3300044712 Bacteria 3300
170 Ga0453684_0146003 3300044712 Bacteria 2818
171 Ga0466970_0000620 3300044765 Bacteria 17414
172 Ga0451576_0000093 3300045051 Bacteria 226300
173 Ga0451576_0000420 3300045051 Bacteria 98309
174 Ga0451576_0004035 3300045051 Bacteria 19508
175 Ga0495585_0000246 3300046492 Bacteria 56090
176 Ga0495633_0000023 3300046558 Bacteria 226510
177 Ga0495668_0000012 3300046616 Bacteria 458817
178 Ga0495625_0000003 3300046660 Bacteria 686847
179 Ga0495649_0000002 3300046694 Bacteria 1093458
180 Ga0495686_0008849 3300047472 Bacteria 7329
181 Ga0495686_0023510 3300047472 Bacteria 4064
182 Ga0496122_0000596 3300048925 Bacteria 74357
183 Ga0496124_0000071 3300048927 Bacteria 220642
184 Ga0496124_0020139 3300048927 Bacteria 6176
185 Ga0501032_0000685 3300049569 Bacteria 27548
186 Ga0501033_0000006 3300049570 Bacteria 348953
187 nmdc:mga05p37_49322_c1 3300050507 Bacteria 5178
188 Ga0500651_0002068 3300053093 Bacteria 10422
189 Ga0500641_0003295 3300053096 Bacteria 5713
190 Ga0500618_000009 3300053125 Bacteria 209970
191 Ga0500589_006938 3300053147 Bacteria 4582
192 Ga0500624_000287 3300053157 Bacteria 17432
193 Ga0500633_0003051 3300053160 Bacteria 3581

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003316 rootH1_10041803 rootH1_100418033 554
2 3300028794 Ga0307515_10000349 Ga0307515_1000034984 562
3 3300031911 Ga0307412_10002164 Ga0307412_100021645 610
4 iso_pu_bacteria 2929154850 2929157292 619
5 3300049569 Ga0501032_0000685 Ga0501032_0000685_16863_18836 624
6 3300049570 Ga0501033_0000006 Ga0501033_0000006_69691_71664 624
7 3300042876 Ga0451577_0014240 Ga0451577_0014240_1626_3584 625
8 3300044712 Ga0453684_0001157 Ga0453684_0001157_67720_69678 625
9 3300005539 Ga0068853_100000882 Ga0068853_1000008822 629
10 3300009551 Ga0105238_10015673 Ga0105238_100156732 629
11 3300010375 Ga0105239_10026389 Ga0105239_100263894 629
12 3300026041 Ga0207639_10004990 Ga0207639_100049902 629
13 3300013297 Ga0157378_10111485 Ga0157378_101114852 631
14 3300045051 Ga0451576_0004035 Ga0451576_0004035_224_2179 640
15 3300044712 Ga0453684_0076370 Ga0453684_0076370_2171_4126 642
16 3300048927 Ga0496124_0020139 Ga0496124_0020139_2171_4279 644
17 3300047472 Ga0495686_0023510 Ga0495686_0023510_831_3077 646
18 3300009093 Ga0105240_10033888 Ga0105240_100338883 649
19 3300009553 Ga0105249_10086858 Ga0105249_100868581 649
20 3300031251 Ga0265327_10000054 Ga0265327_10000054198 650
21 3300003316 rootH1_10003378 rootH1_100033784 654
22 3300003323 rootH1_10037634 rootH1_100376343 654
23 3300044712 Ga0453684_0078313 Ga0453684_0078313_209_2179 655
24 3300048927 Ga0496124_0000071 Ga0496124_0000071_214774_216882 657
25 3300044673 Ga0453683_0000139 Ga0453683_0000139_22830_24911 658
26 3300003320 rootH2_10045029 rootH2_1004502913 665
27 3300003323 rootH1_10015180 rootH1_100151809 665
28 3300009147 Ga0114129_10063119 Ga0114129_100631192 669
29 3300005843 Ga0068860_100000026 Ga0068860_100000026158 671
30 3300013306 Ga0163162_10000219 Ga0163162_1000021925 671
31 3300014969 Ga0157376_10001877 Ga0157376_100018779 671
32 3300028381 Ga0268264_10000117 Ga0268264_10000117134 671
33 3300013104 Ga0157370_10001350 Ga0157370_1000135011 672
34 3300005364 Ga0070673_100047065 Ga0070673_1000470652 673
35 3300010375 Ga0105239_10003997 Ga0105239_100039974 673
36 3300026023 Ga0207677_10014366 Ga0207677_100143662 673
37 3300003322 rootL2_10114467 rootL2_101144671 680
38 3300005614 Ga0068856_100038054 Ga0068856_1000380541 680
39 3300009545 Ga0105237_10003997 Ga0105237_100039972 680
40 3300013307 Ga0157372_10079605 Ga0157372_100796051 680
41 3300003323 rootH1_10022931 rootH1_100229317 681
42 3300005614 Ga0068856_100107685 Ga0068856_1001076852 681
43 3300010375 Ga0105239_10019126 Ga0105239_100191262 681
44 3300015682 Ga0183373_1001 Ga0183373_10011001 681
45 3300026078 Ga0207702_10081480 Ga0207702_100814802 681
46 3300029957 Ga0265324_10000701 Ga0265324_100007018 681
47 3300003323 rootH1_10002995 rootH1_100029952 682
48 3300005563 Ga0068855_100002297 Ga0068855_10000229716 682
49 3300006358 Ga0068871_100014890 Ga0068871_1000148904 682
50 3300006881 Ga0068865_100038773 Ga0068865_1000387732 682
51 3300025208 Ga0209436_100572 Ga0209436_1005728 682
52 3300025284 Ga0209130_1001256 Ga0209130_10012569 682
53 3300025302 Ga0207426_1000284 Ga0207426_10002847 682
54 3300005459 Ga0068867_100001410 Ga0068867_1000014106 683
55 3300005471 Ga0070698_100106119 Ga0070698_1001061191 683
56 3300005563 Ga0068855_100020684 Ga0068855_1000206843 683
57 3300005718 Ga0068866_10008745 Ga0068866_100087452 683
58 3300025246 Ga0209646_1003449 Ga0209646_10034492 683
59 3300025949 Ga0207667_10054205 Ga0207667_100542052 683
60 3300026089 Ga0207648_10008518 Ga0207648_100085183 683
61 3300046492 Ga0495585_0000246 Ga0495585_0000246_36976_39072 683
62 3300050507 nmdc:mga05p37_49322_c1 nmdc:mga05p37_49322_c1_1778_3859 683
63 3300053125 Ga0500618_000009 Ga0500618_000009_80432_82528 683
64 3300053147 Ga0500589_006938 Ga0500589_006938_702_2801 683
65 3300053157 Ga0500624_000287 Ga0500624_000287_10331_12418 683
66 3300005539 Ga0068853_100046379 Ga0068853_1000463793 684
67 3300005617 Ga0068859_100000887 Ga0068859_1000008879 684
68 3300005617 Ga0068859_100058441 Ga0068859_1000584412 684
69 3300006931 Ga0097620_100000887 Ga0097620_1000008879 684
70 3300006931 Ga0097620_100058441 Ga0097620_1000584412 684
71 3300031251 Ga0265327_10000592 Ga0265327_100005922 684
72 3300044712 Ga0453684_0028742 Ga0453684_0028742_730_2808 684
73 3300053160 Ga0500633_0003051 Ga0500633_0003051_187_2280 684
74 3300003215 JGI25153J46596_10018503 JGI25153J46596_100185032 685
75 3300005843 Ga0068860_100021792 Ga0068860_1000217924 685
76 3300025295 Ga0209564_1001876 Ga0209564_10018765 685
77 3300025297 Ga0209758_1002806 Ga0209758_10028065 685
78 3300025302 Ga0207426_1002688 Ga0207426_10026883 685
79 3300028381 Ga0268264_10010840 Ga0268264_100108404 685
80 3300042876 Ga0451577_0049678 Ga0451577_0049678_1233_3314 685
81 3300044712 Ga0453684_0085952 Ga0453684_0085952_57_2138 685
82 3300044712 Ga0453684_0112775 Ga0453684_0112775_301_2382 685
83 3300044712 Ga0453684_0146003 Ga0453684_0146003_505_2586 685
84 3300044712 Ga0453684_0051819 Ga0453684_0051819_44_2143 686
85 iso_pu_bacteria 2919683626 2919685460 686
86 iso_pu_bacteria 2919692658 2919697048 686
87 iso_pu_bacteria 2945977869 2945979029 686
88 iso_pu_bacteria 2946013367 2946015109 686
89 3300003322 rootL2_10013561 rootL2_100135612 687
90 3300003323 rootH1_10021531 rootH1_100215318 687
91 iso_pu_bacteria 2738541278 2738730147 687
92 3300003320 rootH2_10094755 rootH2_100947552 688
93 3300005262 Ga0065165_1001832 Ga0065165_10018324 688
94 iso_pu_bacteria 8003151029 8003154895 688
95 3300001989 JGI24739J22299_10000708 JGI24739J22299_100007086 689
96 3300003215 JGI25153J46596_10011469 JGI25153J46596_100114692 689
97 3300013296 Ga0157374_10000029 Ga0157374_1000002984 689
98 3300014969 Ga0157376_10002722 Ga0157376_100027226 689
99 3300025297 Ga0209758_1003742 Ga0209758_10037425 689
100 3300030731 Ga0316177_1006717 Ga0316177_10067171 689
101 3300030732 Ga0316176_1060807 Ga0316176_10608075 689
102 3300044658 Ga0466972_0000002 Ga0466972_0000002_292450_294558 689
103 3300044765 Ga0466970_0000620 Ga0466970_0000620_2494_4602 689
104 3300053093 Ga0500651_0002068 Ga0500651_0002068_6328_8403 689
105 3300005327 Ga0070658_10000060 Ga0070658_100000605 690
106 3300005563 Ga0068855_100000339 Ga0068855_1000003399 690
107 3300009093 Ga0105240_10021462 Ga0105240_100214621 690
108 3300010375 Ga0105239_10000036 Ga0105239_1000003699 690
109 3300025272 Ga0209455_1008300 Ga0209455_10083002 690
110 3300025909 Ga0207705_10000233 Ga0207705_100002335 690
111 3300025949 Ga0207667_10100410 Ga0207667_101004102 690
112 3300031548 Ga0307408_100000512 Ga0307408_10000051212 690
113 3300042876 Ga0451577_0000285 Ga0451577_0000285_33269_35347 690
114 3300044673 Ga0453683_0000261 Ga0453683_0000261_45911_47989 690
115 3300044712 Ga0453684_0002617 Ga0453684_0002617_33289_35367 690
116 3300044712 Ga0453684_0008603 Ga0453684_0008603_10350_12428 690
117 3300044712 Ga0453684_0012996 Ga0453684_0012996_11491_13569 690
118 3300045051 Ga0451576_0000420 Ga0451576_0000420_62943_65021 690
119 3300003320 rootH2_10032267 rootH2_100322674 691
120 3300005328 Ga0070676_10026675 Ga0070676_100266752 691
121 3300005335 Ga0070666_10000130 Ga0070666_1000013039 691
122 3300005347 Ga0070668_100029514 Ga0070668_1000295143 691
123 3300005456 Ga0070678_100004534 Ga0070678_1000045343 691
124 3300005539 Ga0068853_100021662 Ga0068853_1000216623 691
125 3300005616 Ga0068852_100041134 Ga0068852_1000411344 691
126 3300005617 Ga0068859_100000245 Ga0068859_10000024534 691
127 3300005617 Ga0068859_100013484 Ga0068859_1000134844 691
128 3300005718 Ga0068866_10005605 Ga0068866_100056054 691
129 3300005841 Ga0068863_100041718 Ga0068863_1000417182 691
130 3300005841 Ga0068863_100094627 Ga0068863_1000946271 691
131 3300005842 Ga0068858_100005732 Ga0068858_1000057325 691
132 3300005843 Ga0068860_100000788 Ga0068860_10000078813 691
133 3300005843 Ga0068860_100001305 Ga0068860_1000013055 691
134 3300006237 Ga0097621_100000369 Ga0097621_1000003695 691
135 3300006358 Ga0068871_100000513 Ga0068871_1000005135 691
136 3300006881 Ga0068865_100000626 Ga0068865_1000006263 691
137 3300006931 Ga0097620_100000245 Ga0097620_10000024534 691
138 3300006931 Ga0097620_100013484 Ga0097620_1000134844 691
139 3300009098 Ga0105245_10055232 Ga0105245_100552322 691
140 3300009101 Ga0105247_10000259 Ga0105247_100002593 691
141 3300009101 Ga0105247_10009903 Ga0105247_100099032 691
142 3300009176 Ga0105242_10008865 Ga0105242_100088655 691
143 3300009545 Ga0105237_10000347 Ga0105237_1000034720 691
144 3300009545 Ga0105237_10000993 Ga0105237_100009936 691
145 3300009545 Ga0105237_10021711 Ga0105237_100217113 691
146 3300009553 Ga0105249_10004041 Ga0105249_100040412 691
147 3300009553 Ga0105249_10008887 Ga0105249_100088873 691
148 3300010375 Ga0105239_10000119 Ga0105239_100001192 691
149 3300010375 Ga0105239_10008596 Ga0105239_100085963 691
150 3300013104 Ga0157370_10000022 Ga0157370_1000002259 691
151 3300013296 Ga0157374_10000599 Ga0157374_1000059916 691
152 3300013307 Ga0157372_10049807 Ga0157372_100498072 691
153 3300014497 Ga0182008_10000168 Ga0182008_100001683 691
154 3300017792 Ga0163161_10001120 Ga0163161_100011202 691
155 3300025900 Ga0207710_10000244 Ga0207710_1000024423 691
156 3300025900 Ga0207710_10020072 Ga0207710_100200723 691
157 3300025903 Ga0207680_10000090 Ga0207680_100000908 691
158 3300025907 Ga0207645_10001515 Ga0207645_100015154 691
159 3300025911 Ga0207654_10001052 Ga0207654_100010529 691
160 3300025914 Ga0207671_10000792 Ga0207671_1000079210 691
161 3300025914 Ga0207671_10000907 Ga0207671_1000090713 691
162 3300025938 Ga0207704_10000705 Ga0207704_100007052 691
163 3300025942 Ga0207689_10026175 Ga0207689_100261751 691
164 3300025961 Ga0207712_10005912 Ga0207712_100059123 691
165 3300026035 Ga0207703_10001108 Ga0207703_1000110814 691
166 3300026041 Ga0207639_10025470 Ga0207639_100254702 691
167 3300026088 Ga0207641_10000089 Ga0207641_1000008935 691
168 3300026088 Ga0207641_10046267 Ga0207641_100462672 691
169 3300026089 Ga0207648_10002167 Ga0207648_100021677 691
170 3300026095 Ga0207676_10106821 Ga0207676_101068211 691
171 3300026121 Ga0207683_10008065 Ga0207683_100080652 691
172 3300026142 Ga0207698_10000765 Ga0207698_100007656 691
173 3300028380 Ga0268265_10053233 Ga0268265_100532331 691
174 3300028381 Ga0268264_10001140 Ga0268264_1000114010 691
175 3300028381 Ga0268264_10003262 Ga0268264_100032623 691
176 3300028794 Ga0307515_10000076 Ga0307515_1000007661 691
177 3300028794 Ga0307515_10002439 Ga0307515_1000243910 691
178 3300031548 Ga0307408_100000675 Ga0307408_1000006756 691
179 3300031901 Ga0307406_10008216 Ga0307406_100082162 691
180 3300031995 Ga0307409_100007538 Ga0307409_1000075382 691
181 3300042876 Ga0451577_0000551 Ga0451577_0000551_58895_60979 691
182 3300044658 Ga0466972_0000036 Ga0466972_0000036_71510_73591 691
183 3300044712 Ga0453684_0000340 Ga0453684_0000340_129847_131931 691
184 3300044712 Ga0453684_0059565 Ga0453684_0059565_1846_3927 691
185 3300045051 Ga0451576_0000093 Ga0451576_0000093_62332_64416 691
186 3300046558 Ga0495633_0000023 Ga0495633_0000023_63292_65379 691
187 3300046616 Ga0495668_0000012 Ga0495668_0000012_80221_82308 691
188 3300046660 Ga0495625_0000003 Ga0495625_0000003_632594_634675 691
189 3300046694 Ga0495649_0000002 Ga0495649_0000002_372331_374412 691
190 3300047472 Ga0495686_0008849 Ga0495686_0008849_1286_3370 691
191 3300048925 Ga0496122_0000596 Ga0496122_0000596_40716_42815 691
192 3300053096 Ga0500641_0003295 Ga0500641_0003295_2011_4092 691
193 3300001979 JGI24740J21852_10001011 JGI24740J21852_100010114 692
194 3300002738 JGI25154J39366_1000008 JGI25154J39366_100000827 692
195 3300002741 JGI25157J39369_1002200 JGI25157J39369_10022002 692
196 3300003354 JGI25160J50197_1009244 JGI25160J50197_10092443 692
197 3300025246 Ga0209646_1000045 Ga0209646_100004529 692
198 3300025250 Ga0209026_1000241 Ga0209026_100024127 692
199 3300025302 Ga0207426_1000203 Ga0207426_100020316 692
200 3300025302 Ga0207426_1000241 Ga0207426_100024166 692

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22633

F5_F8_type_C_2

NedA-like, galactose-binding domain

429

515

0.96

PF13287

Fn3_assoc

Fn3 associated

551

610

0.91

PF13290

CHB_HEX_C_1

Chitobiase/beta-hexosaminidase C-terminal domain

544

607

0.91

PF00754

F5_F8_type_C

F5/8 type C domain

615

739

0.87

PF22633

F5_F8_type_C_2

NedA-like, galactose-binding domain

629

722

0.86

PF01120

Alpha_L_fucos

Alpha-L-fucosidase

75

401

0.85

PF00754

F5_F8_type_C

F5/8 type C domain

411

529

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6org-assembly2.cif.gz_B crystal structure of spgh29 0.9279 25 482
6org-assembly2.cif.gz_B crystal structure of spgh29 0.9239 25 482
6orh-assembly1.cif.gz_B crystal structure of spgh29 0.9219 25 482
6orh-assembly1.cif.gz_B crystal structure of spgh29 0.9199 25 482
4oue-assembly2.cif.gz_B crystal structure of an a-l-fucosidase gh29 from bacteroides thetaiotaomicron (bt2192) in complex with iptg 0.9144 25 483
ID Description Score Start End Superfamily
af_Q7XUR3_364_478_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.952 368 480 2.60.120.260
4ozoB02 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.9437 352 480 2.60.120.260
af_Q7XUR3_35_350_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.936 31 353 3.20.20.80
af_Q7XUR3_364_478_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.9282 368 480 2.60.120.260
af_A0A0R0H775_129_240_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.9238 368 476 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A3R8P705-F1-model_v4 deleted 0.993 31 186
AF-A0A3M1RUV5-F1-model_v4 Glycoside hydrolase family 29 0.992 23 179 GO:0004560
GO:0005764
GO:0006004
GO:0016139
AF-K1UJK4-F1-model_v4 Alpha-L-fucosidase 0.9919 32 150 GO:0004560
GO:0005764
GO:0006004
GO:0016139
AF-A0A7Y5IZ93-F1-model_v4 Alpha-L-fucosidase 0.9899 48 179 GO:0004560
GO:0005764
GO:0006004
GO:0016139
AF-A0A101HFS9-F1-model_v4 F5/8 type C domain protein 0.9896 32 179 GO:0004560
GO:0005764
GO:0006004
GO:0016139

Feature Viewer

pLDDT pTM Quality
90.06 0.81 High
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Predicted Structure (AlphaFold2)

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