F306417

General Info

Members Datasets Scaffolds Average Seq Length
199 171 398 293

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_4971_c1|nmdc:mga0n895_4971_c1_7967_8986
Length 339
Sequence VTADGIYHAAGRRIPAPADPSRVVHLSPPSRQRDNRVQLVLEESHVIIITAPAGQIGHQVLGNVLSTGEPIRVIARDPSGLPAEARERVEVIQGSHGDIDVVDQAFAGADAVFWLVPPDPHANSAEAAYVDFTRPACDAFKRHGVQRVVGISALGRGTVAARHAGLATASLAMDDLIAGTGVSYRALTMPSFMDNLLRQVPAIKDRGVFVTPISGDRKLPSCATRDIAAAAARLLLDGSWSGAGHVAVLGPEDLSFNEMAQIMSEVLSQPVRYQQIPGQALKDRLTGAGMSDAMAQATVDMMIAKDQGLDNAEPRTPESTTPTSFREWCEEVLKPTVLA

Samples

Sample ID Description Type Environment
1 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
36 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
52 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
63 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
64 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
65 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
66 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
67 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
68 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
69 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
70 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
73 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
74 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
75 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
78 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
79 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
80 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
81 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
82 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
83 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
84 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
85 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
86 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
87 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
88 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
89 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
90 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
91 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
92 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
93 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
94 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
95 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
96 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
102 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
124 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
139 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
154 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
155 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
156 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
157 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
160 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
161 2508501050 Microvirga lupini Lut6 Isolate Nodule
162 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
163 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
164 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
165 2671180195 Frankia sp. CcI49 Isolate Nodule
166 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
167 2773857922 Frankia sp. CcI49 Isolate Nodule
168 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
169 2878788777 Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 Isolate Nodule
170 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
171 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.47
Metatranscriptomes 1.01
Isolates 5.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.52
Nodule 3.02
Rhizoplane 4.52
Rhizosphere 81.91
Stem 0
Stem Tuber 0
Unclassified 3.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0n895_4971_c1 3300050512 Bacteria 11032
2 JGI25406J46586_10004367 3300003203 Bacteria 6594
3 rootH1_10306374 3300003323 Bacteria 1304
4 Ga0070683_100332237 3300005329 Bacteria 1447
5 Ga0070694_100039999 3300005444 Bacteria 3124
6 Ga0070708_100051506 3300005445 Bacteria 3648
7 Ga0070708_100066125 3300005445 Bacteria 3244
8 Ga0070662_100074109 3300005457 Bacteria 2517
9 Ga0070706_100027040 3300005467 Bacteria 5279
10 Ga0070707_100018249 3300005468 Bacteria 6602
11 Ga0070698_100103753 3300005471 Bacteria 2813
12 Ga0070699_100078425 3300005518 Bacteria 2877
13 Ga0070697_100018663 3300005536 Bacteria 5471
14 Ga0068856_100067686 3300005614 Bacteria 3529
15 Ga0068863_100314335 3300005841 Bacteria 1521
16 Ga0068858_100176908 3300005842 Bacteria 2014
17 Ga0081538_10003346 3300005981 Bacteria 15179
18 Ga0081540_1000015 3300005983 Bacteria 178704
19 Ga0081539_10002564 3300005985 Bacteria 25179
20 Ga0081539_10003927 3300005985 Bacteria 17256
21 Ga0081539_10111436 3300005985 Bacteria 1376
22 Ga0081539_10145931 3300005985 Bacteria 1144
23 Ga0070717_10039261 3300006028 Bacteria 3851
24 Ga0070717_10101119 3300006028 Bacteria 2448
25 Ga0070717_10299326 3300006028 Bacteria 1430
26 Ga0070712_100000759 3300006175 Bacteria 18992
27 Ga0097621_100386324 3300006237 Bacteria 1251
28 Ga0068871_100607628 3300006358 Bacteria 995
29 Ga0075428_100080650 3300006844 Bacteria 3551
30 Ga0075431_100123119 3300006847 Bacteria 2676
31 Ga0075433_10022503 3300006852 Bacteria 5290
32 Ga0075433_10025734 3300006852 Bacteria 4976
33 Ga0075434_100004058 3300006871 Bacteria 13132
34 Ga0075434_100530357 3300006871 Bacteria 1198
35 Ga0075429_100083744 3300006880 Bacteria 2780
36 Ga0075435_100008418 3300007076 Bacteria 7400
37 Ga0111539_10056922 3300009094 Bacteria 4645
38 Ga0114129_10106671 3300009147 Bacteria 3869
39 Ga0114129_10360810 3300009147 Bacteria 1923
40 Ga0114129_10773110 3300009147 Bacteria 1227
41 Ga0105241_10062910 3300009174 Bacteria 2862
42 Ga0105248_10317060 3300009177 Bacteria 1756
43 Ga0105249_10277579 3300009553 Bacteria 1672
44 Ga0105246_10256241 3300011119 Bacteria 1391
45 Ga0207426_1002287 3300025302 Bacteria 12639
46 Ga0207653_10006459 3300025885 Bacteria 3658
47 Ga0207647_10074564 3300025904 Bacteria 2043
48 Ga0207685_10043409 3300025905 Bacteria 1694
49 Ga0207685_10102593 3300025905 Bacteria 1226
50 Ga0207699_10089312 3300025906 Bacteria 1931
51 Ga0207684_10004499 3300025910 Bacteria 13107
52 Ga0207684_10093096 3300025910 Bacteria 2569
53 Ga0207654_10055504 3300025911 Bacteria 2294
54 Ga0207693_10002110 3300025915 Bacteria 17350
55 Ga0207646_10006281 3300025922 Bacteria 12325
56 Ga0207646_10016270 3300025922 Bacteria 6983
57 Ga0207664_10006921 3300025929 Bacteria 7844
58 Ga0207712_10084704 3300025961 Bacteria 2317
59 Ga0207702_10123084 3300026078 Bacteria 2324
60 Ga0207641_10053384 3300026088 Bacteria 3426
61 Ga0207641_10236240 3300026088 Bacteria 1701
62 Ga0307517_10277276 3300028786 Bacteria 959
63 Ga0307515_10003313 3300028794 Bacteria 34044
64 Ga0265338_10000162 3300028800 Bacteria 121694
65 Ga0265338_10308037 3300028800 Unclassified 1149
66 Ga0307512_10006530 3300030522 Bacteria 11794
67 Ga0265762_1006181 3300030760 Unclassified 2146
68 Ga0265760_10047654 3300031090 Unclassified 1287
69 Ga0265320_10021471 3300031240 Bacteria 3471
70 Ga0265325_10000021 3300031241 Bacteria 124310
71 Ga0265340_10004952 3300031247 Bacteria 7405
72 Ga0265327_10020628 3300031251 Unclassified 4006
73 Ga0265316_10232401 3300031344 Unclassified 1357
74 Ga0307513_10005941 3300031456 Bacteria 16019
75 Ga0307513_10009043 3300031456 Bacteria 12634
76 Ga0265313_10000001 3300031595 Bacteria 313647
77 Ga0307508_10010591 3300031616 Bacteria 8433
78 Ga0265342_10019375 3300031712 Unclassified 4386
79 Ga0307516_10216462 3300031730 Bacteria 1627
80 Ga0373930_0026875 3300034816 Bacteria 1163
81 Ga0373940_0008913 3300035088 Bacteria 2317
82 Ga0373936_0054048 3300035113 Bacteria 1629
83 Ga0373945_0033795 3300035116 Bacteria 1820
84 Ga0373961_0011581 3300035241 Bacteria 2191
85 Ga0373931_0070887 3300035691 Bacteria 1902
86 Ga0373947_0123824 3300035725 Bacteria 1644
87 Ga0373925_0019669 3300037068 Bacteria 4913
88 Ga0439466_0011064 3300041411 Bacteria 3344
89 Ga0439465_0001929 3300041413 Bacteria 6798
90 Ga0451789_0396172 3300041443 Bacteria 1304
91 Ga0451797_0410943 3300041453 Bacteria 3791
92 Ga0466967_0713219 3300045976 Bacteria 994
93 Ga0495627_024022 3300046453 Bacteria 1991
94 Ga0495603_0141085 3300046455 Bacteria 1401
95 Ga0495629_0251025 3300046459 Bacteria 1217
96 Ga0495638_0018878 3300046460 Bacteria 4570
97 Ga0495638_0020221 3300046460 Bacteria 4398
98 Ga0495653_0193136 3300046463 Bacteria 1387
99 Ga0495582_0001760 3300046473 Bacteria 12226
100 Ga0495605_0011431 3300046474 Bacteria 4946
101 Ga0495662_0049675 3300046476 Bacteria 2024
102 Ga0495662_0167106 3300046476 Bacteria 1084
103 Ga0495585_0059564 3300046492 Bacteria 2103
104 Ga0495594_0041266 3300046499 Bacteria 2527
105 Ga0495594_0137605 3300046499 Bacteria 1384
106 Ga0495596_0020821 3300046500 Bacteria 2682
107 Ga0495607_0043009 3300046501 Bacteria 2674
108 Ga0495606_0016584 3300046507 Bacteria 5609
109 Ga0495610_0035410 3300046512 Bacteria 2563
110 Ga0495616_0035396 3300046513 Bacteria 2584
111 Ga0495618_0044708 3300046514 Bacteria 2793
112 Ga0495618_0051158 3300046514 Bacteria 2610
113 Ga0495620_0021714 3300046515 Bacteria 3110
114 Ga0495631_0017718 3300046518 Bacteria 3362
115 Ga0495632_0028088 3300046519 Bacteria 2939
116 Ga0495637_0035050 3300046520 Bacteria 2194
117 Ga0495643_0108684 3300046522 Bacteria 1412
118 Ga0495648_0015384 3300046524 Bacteria 5557
119 Ga0495652_0201430 3300046529 Bacteria 1510
120 Ga0495640_0005238 3300046533 Bacteria 10309
121 Ga0495597_0007944 3300046542 Bacteria 5345
122 Ga0495633_0047976 3300046558 Bacteria 2017
123 Ga0495667_0120172 3300046559 Bacteria 1696
124 Ga0495668_0023796 3300046616 Bacteria 3488
125 Ga0495668_0095908 3300046616 Bacteria 1623
126 Ga0495634_0061002 3300046642 Bacteria 2508
127 Ga0495611_0101845 3300046648 Bacteria 1334
128 Ga0495625_0085656 3300046660 Bacteria 2186
129 Ga0495635_0121396 3300046663 Bacteria 1782
130 Ga0495635_0214649 3300046663 Bacteria 1303
131 Ga0495661_0035209 3300046665 Bacteria 3144
132 Ga0495657_0010349 3300046675 Bacteria 7021
133 Ga0495658_0021217 3300046683 Bacteria 3422
134 Ga0495624_0058803 3300046690 Bacteria 2413
135 Ga0495649_0068533 3300046694 Bacteria 1903
136 Ga0495589_0030448 3300046794 Bacteria 2717
137 Ga0495589_0148925 3300046794 Bacteria 1118
138 Ga0495660_0112765 3300046810 Bacteria 1385
139 Ga0495581_0047827 3300047315 Bacteria 2471
140 Ga0495581_0069111 3300047315 Bacteria 2042
141 Ga0495604_0093655 3300047317 Bacteria 2222
142 Ga0495674_0077814 3300047319 Bacteria 2851
143 Ga0495676_0046641 3300047321 Bacteria 3514
144 Ga0495680_0006324 3300047322 Bacteria 11025
145 Ga0495680_0020628 3300047322 Bacteria 5538
146 Ga0495683_0036716 3300047323 Bacteria 2486
147 Ga0495687_038226 3300047443 Bacteria 2131
148 Ga0495687_052960 3300047443 Bacteria 1712
149 Ga0495677_0087322 3300047445 Bacteria 1173
150 Ga0495685_011023 3300047447 Bacteria 3040
151 Ga0495684_0272732 3300047471 Bacteria 1223
152 Ga0495686_0084979 3300047472 Bacteria 1928
153 Ga0495602_0386250 3300048088 Bacteria 1002
154 Ga0495614_0014555 3300048089 Bacteria 3440
155 Ga0495614_0093891 3300048089 Bacteria 1307
156 Ga0495626_0167543 3300048091 Bacteria 917
157 Ga0496101_0160558 3300048904 Bacteria 1723
158 Ga0496103_0110928 3300048906 Bacteria 1743
159 Ga0496105_0043513 3300048908 Bacteria 3703
160 Ga0496106_0191671 3300048909 Bacteria 1625
161 Ga0496107_0245806 3300048910 Bacteria 1331
162 Ga0496111_0000408 3300048914 Bacteria 21528
163 Ga0496112_0019531 3300048915 Bacteria 6397
164 Ga0496124_0137480 3300048927 Bacteria 1932
165 Ga0495678_020991 3300049459 Bacteria 2883
166 Ga0501032_0059855 3300049569 Bacteria 2555
167 Ga0501033_0037858 3300049570 Bacteria 3609
168 Ga0501034_0204695 3300049571 Bacteria 1930
169 Ga0501036_0018634 3300049572 Bacteria 5820
170 Ga0501038_0025826 3300049574 Bacteria 5233
171 Ga0501043_0040809 3300049579 Bacteria 3647
172 Ga0501035_0006808 3300049822 Bacteria 10679
173 Ga0501044_0003968 3300049823 Bacteria 16570
174 nmdc:mga05p37_409486_c1 3300050507 Bacteria 1581
175 nmdc:mga08y16_151112_c1 3300050511 Bacteria 2414
176 nmdc:mga0n895_149793_c1 3300050512 Bacteria 2363
177 nmdc:mga0rr50_2296_c1 3300050513 Bacteria 10732
178 nmdc:mga08x19_39839_c1 3300050514 Bacteria 2988
179 nmdc:mga0a205_4305_c1 3300050515 Bacteria 12780
180 Ga0495619_0153939 3300053085 Bacteria 1586
181 Ga0500643_004050 3300053087 Bacteria 6762
182 Ga0500641_0017838 3300053096 Bacteria 2662
183 Ga0500650_0013858 3300053098 Bacteria 3394
184 Ga0500594_0009503 3300053118 Bacteria 2240
185 Ga0500607_135989 3300053121 Bacteria 1164
186 Ga0500568_0003833 3300053139 Bacteria 8215
187 Ga0500616_0036449 3300053153 Bacteria 2669
188 Ga0500637_0012621 3300053178 Bacteria 4409
189 2508728036 2508501050 Bacteria 9633614
190 2513908968 2513237144 Bacteria 7530820
191 2597811846 2597489875 Bacteria 7010078
192 2616694464 2616644814 Bacteria 11555299
193 2671839446 2671180195 Bacteria 9757215
194 2753269650 2751185782 Bacteria 11227053
195 2774857602 2773857922 Bacteria 9757215
196 2809591146 2808606522 Bacteria 9488490
197 2878793742 2878788777 Bacteria 6567085
198 2937841346 2937836603 Bacteria 6811263
199 3003007121 3002998708 Bacteria 11715108
200 nmdc:mga0n895_4971_c1
201 JGI25406J46586_10004367
202 rootH1_10306374
203 Ga0070683_100332237
204 Ga0070694_100039999
205 Ga0070708_100051506
206 Ga0070708_100066125
207 Ga0070662_100074109
208 Ga0070706_100027040
209 Ga0070707_100018249
210 Ga0070698_100103753
211 Ga0070699_100078425
212 Ga0070697_100018663
213 Ga0068856_100067686
214 Ga0068863_100314335
215 Ga0068858_100176908
216 Ga0081538_10003346
217 Ga0081540_1000015
218 Ga0081539_10002564
219 Ga0081539_10003927
220 Ga0081539_10111436
221 Ga0081539_10145931
222 Ga0070717_10039261
223 Ga0070717_10101119
224 Ga0070717_10299326
225 Ga0070712_100000759
226 Ga0097621_100386324
227 Ga0068871_100607628
228 Ga0075428_100080650
229 Ga0075431_100123119
230 Ga0075433_10022503
231 Ga0075433_10025734
232 Ga0075434_100004058
233 Ga0075434_100530357
234 Ga0075429_100083744
235 Ga0075435_100008418
236 Ga0111539_10056922
237 Ga0114129_10106671
238 Ga0114129_10360810
239 Ga0114129_10773110
240 Ga0105241_10062910
241 Ga0105248_10317060
242 Ga0105249_10277579
243 Ga0105246_10256241
244 Ga0207426_1002287
245 Ga0207653_10006459
246 Ga0207647_10074564
247 Ga0207685_10043409
248 Ga0207685_10102593
249 Ga0207699_10089312
250 Ga0207684_10004499
251 Ga0207684_10093096
252 Ga0207654_10055504
253 Ga0207693_10002110
254 Ga0207646_10006281
255 Ga0207646_10016270
256 Ga0207664_10006921
257 Ga0207712_10084704
258 Ga0207702_10123084
259 Ga0207641_10053384
260 Ga0207641_10236240
261 Ga0307517_10277276
262 Ga0307515_10003313
263 Ga0265338_10000162
264 Ga0265338_10308037
265 Ga0307512_10006530
266 Ga0265762_1006181
267 Ga0265760_10047654
268 Ga0265320_10021471
269 Ga0265325_10000021
270 Ga0265340_10004952
271 Ga0265327_10020628
272 Ga0265316_10232401
273 Ga0307513_10005941
274 Ga0307513_10009043
275 Ga0265313_10000001
276 Ga0307508_10010591
277 Ga0265342_10019375
278 Ga0307516_10216462
279 Ga0373930_0026875
280 Ga0373940_0008913
281 Ga0373936_0054048
282 Ga0373945_0033795
283 Ga0373961_0011581
284 Ga0373931_0070887
285 Ga0373947_0123824
286 Ga0373925_0019669
287 Ga0439466_0011064
288 Ga0439465_0001929
289 Ga0451789_0396172
290 Ga0451797_0410943
291 Ga0466967_0713219
292 Ga0495627_024022
293 Ga0495603_0141085
294 Ga0495629_0251025
295 Ga0495638_0018878
296 Ga0495638_0020221
297 Ga0495653_0193136
298 Ga0495582_0001760
299 Ga0495605_0011431
300 Ga0495662_0049675
301 Ga0495662_0167106
302 Ga0495585_0059564
303 Ga0495594_0041266
304 Ga0495594_0137605
305 Ga0495596_0020821
306 Ga0495607_0043009
307 Ga0495606_0016584
308 Ga0495610_0035410
309 Ga0495616_0035396
310 Ga0495618_0044708
311 Ga0495618_0051158
312 Ga0495620_0021714
313 Ga0495631_0017718
314 Ga0495632_0028088
315 Ga0495637_0035050
316 Ga0495643_0108684
317 Ga0495648_0015384
318 Ga0495652_0201430
319 Ga0495640_0005238
320 Ga0495597_0007944
321 Ga0495633_0047976
322 Ga0495667_0120172
323 Ga0495668_0023796
324 Ga0495668_0095908
325 Ga0495634_0061002
326 Ga0495611_0101845
327 Ga0495625_0085656
328 Ga0495635_0121396
329 Ga0495635_0214649
330 Ga0495661_0035209
331 Ga0495657_0010349
332 Ga0495658_0021217
333 Ga0495624_0058803
334 Ga0495649_0068533
335 Ga0495589_0030448
336 Ga0495589_0148925
337 Ga0495660_0112765
338 Ga0495581_0047827
339 Ga0495581_0069111
340 Ga0495604_0093655
341 Ga0495674_0077814
342 Ga0495676_0046641
343 Ga0495680_0006324
344 Ga0495680_0020628
345 Ga0495683_0036716
346 Ga0495687_038226
347 Ga0495687_052960
348 Ga0495677_0087322
349 Ga0495685_011023
350 Ga0495684_0272732
351 Ga0495686_0084979
352 Ga0495602_0386250
353 Ga0495614_0014555
354 Ga0495614_0093891
355 Ga0495626_0167543
356 Ga0496101_0160558
357 Ga0496103_0110928
358 Ga0496105_0043513
359 Ga0496106_0191671
360 Ga0496107_0245806
361 Ga0496111_0000408
362 Ga0496112_0019531
363 Ga0496124_0137480
364 Ga0495678_020991
365 Ga0501032_0059855
366 Ga0501033_0037858
367 Ga0501034_0204695
368 Ga0501036_0018634
369 Ga0501038_0025826
370 Ga0501043_0040809
371 Ga0501035_0006808
372 Ga0501044_0003968
373 nmdc:mga05p37_409486_c1
374 nmdc:mga08y16_151112_c1
375 nmdc:mga0n895_149793_c1
376 nmdc:mga0rr50_2296_c1
377 nmdc:mga08x19_39839_c1
378 nmdc:mga0a205_4305_c1
379 Ga0495619_0153939
380 Ga0500643_004050
381 Ga0500641_0017838
382 Ga0500650_0013858
383 Ga0500594_0009503
384 Ga0500607_135989
385 Ga0500568_0003833
386 Ga0500616_0036449
387 Ga0500637_0012621
388 2508728036
389 2513908968
390 2597811846
391 2616694464
392 2671839446
393 2753269650
394 2774857602
395 2809591146
396 2878793742
397 2937841346
398 3003007121

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

47

164

0.88

PF05368

NmrA

NmrA-like family

47

275

0.83

PF13460

NAD_binding_10

NAD(P)H-binding

53

237

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e48-assembly1.cif.gz_A crystal structure of a nucleoside-diphosphate-sugar epimerase (sav0421) from staphylococcus aureus, northeast structural genomics consortium target zr319 0.847 2 286
3e48-assembly1.cif.gz_A crystal structure of a nucleoside-diphosphate-sugar epimerase (sav0421) from staphylococcus aureus, northeast structural genomics consortium target zr319 0.8386 2 286
5l4l-assembly1.cif.gz_A polyketide ketoreductase simc7 - ternary complex with nadp+ and 7-oxo-sd8 0.8366 1 294
5l4l-assembly1.cif.gz_A polyketide ketoreductase simc7 - ternary complex with nadp+ and 7-oxo-sd8 0.8338 1 294
5xtb-assembly1.cif.gz_J cryo-em structure of human respiratory complex i matrix arm 0.8233 2 254
ID Description Score Start End Superfamily
af_Q54LW0_12_289_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8517 3 288 3.40.50.720
af_P39315_1_278_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8439 1 282 3.40.50.2300
af_Q54LW0_12_289_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8431 3 288 3.40.50.720
af_Q2G0Y0_1_192_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8411 2 197 3.40.50.720
5l4lA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8366 1 294 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A365Z723-F1-model_v4 NmrA family transcriptional regulator 0.9957 23 294
AF-A0A7K2NMJ3-F1-model_v4 NAD(P)H-binding protein 0.9869 1 259
AF-A0A848S109-F1-model_v4 NAD(P)H-binding protein 0.9848 1 294
AF-A0A848S109-F1-model_v4 NAD(P)H-binding protein 0.9815 1 294
AF-A0A2V5C150-F1-model_v4 deleted 0.9812 96 292

Map